BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039228
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 46/214 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICH 128
A+D F N++G G F VY+G + +VA+K L + QG F E + + H
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVH 94
Query: 129 RNLVRFIS-----------------------------------------IAIDVASALDY 147
RNL+R IA+ A L Y
Sbjct: 95 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 154
Query: 148 LHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
LH HC I+H D K +N+LLD + A +GDF LA+ + VR TIG+ A
Sbjct: 155 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL---MDYKDXHVXXAVRGTIGHIA 211
Query: 208 LDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241
+Y + S D + YG++LLE++T ++ D
Sbjct: 212 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 245
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 46/214 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICH 128
A+D F N++G G F VY+G + +VA+K L + QG F E + + H
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVH 86
Query: 129 RNLVRFIS-----------------------------------------IAIDVASALDY 147
RNL+R IA+ A L Y
Sbjct: 87 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 146
Query: 148 LHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
LH HC I+H D K +N+LLD + A +GDF LA+ + VR IG+ A
Sbjct: 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL---MDYKDXHVXXAVRGXIGHIA 203
Query: 208 LDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241
+Y + S D + YG++LLE++T ++ D
Sbjct: 204 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 46/198 (23%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF- 134
LI +G G F V+ G ++ N V AIK L + +SF+ E + +K + H LV+
Sbjct: 13 LIKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPGTM-SPESFLEEAQIMKKLKHDKLVQLY 70
Query: 135 -------------------------------------ISIAIDVASALDYLHHHCQELIL 157
+ +A VA+ + Y+ +
Sbjct: 71 AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YI 127
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217
H D + +N+L+ N L I DF LAR + + ++ G + I +TA + L +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 218 TNGDAYNYGILLLEMVTR 235
D +++GILL E+VT+
Sbjct: 185 IKSDVWSFGILLTELVTK 202
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 85/211 (40%), Gaps = 60/211 (28%)
Query: 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLS----IQCQGASKSFMAECKALKNICHRNLVR 133
N +G G F VY+G +N VA+K L+ I + + F E K + H NLV
Sbjct: 37 NKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 134 FIS----------------------------------------IAIDVASALDYLH--HH 151
+ IA A+ +++LH HH
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 152 CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTAL--D 209
+H D K +N+LLD A I DF LAR ++ + S R +G TA
Sbjct: 155 -----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS-----RIVGTTAYMAP 204
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
L E++ D Y++G++LLE++T +D
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 84/211 (39%), Gaps = 60/211 (28%)
Query: 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLS----IQCQGASKSFMAECKALKNICHRNLVR 133
N +G G F VY+G +N VA+K L+ I + + F E K + H NLV
Sbjct: 37 NKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 134 FIS----------------------------------------IAIDVASALDYLH--HH 151
+ IA A+ +++LH HH
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 152 CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTAL--D 209
+H D K +N+LLD A I DF LAR ++ + R +G TA
Sbjct: 155 -----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX-----RIVGTTAYMAP 204
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
L E++ D Y++G++LLE++T +D
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKN 125
L + + F + IG G++ VY+ L VVA+K L + +G + + E LK
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 ICHRNLVRFISI--------------AIDV-----ASAL---------DYLHHHCQEL-- 155
+ H N+V+ + + ++D+ ASAL YL Q L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 156 -----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDY 210
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEI 177
Query: 211 DLGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKN 125
L + + F + IG G++ VY+ L VVA+K L + +G + + E LK
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 126 ICHRNLVRFISI--------------AIDV-----ASAL---------DYLHHHCQEL-- 155
+ H N+V+ + + ++D+ ASAL YL Q L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 156 -----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDY 210
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEI 176
Query: 211 DLGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 218
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKN 125
L + + F + IG G++ VY+ L VVA+K L + +G + + E LK
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 ICHRNLVRFISI--------------AIDV-----ASAL---------DYLHHHCQEL-- 155
+ H N+V+ + + ++D+ ASAL YL Q L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 156 -----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDY 210
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEI 177
Query: 211 DLGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 84/211 (39%), Gaps = 60/211 (28%)
Query: 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLS----IQCQGASKSFMAECKALKNICHRNLVR 133
N +G G F VY+G +N VA+K L+ I + + F E K + H NLV
Sbjct: 31 NKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 134 FIS----------------------------------------IAIDVASALDYLH--HH 151
+ IA A+ +++LH HH
Sbjct: 89 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 152 CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTAL--D 209
+H D K +N+LLD A I DF LAR ++ + R +G TA
Sbjct: 149 -----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX-----RIVGTTAYMAP 198
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
L E++ D Y++G++LLE++T +D
Sbjct: 199 EALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 83/211 (39%), Gaps = 60/211 (28%)
Query: 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLS----IQCQGASKSFMAECKALKNICHRNLVR 133
N G G F VY+G +N VA+K L+ I + + F E K H NLV
Sbjct: 28 NKXGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 134 FIS----------------------------------------IAIDVASALDYLH--HH 151
+ IA A+ +++LH HH
Sbjct: 86 LLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH 145
Query: 152 CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+H D K +N+LLD A I DF LAR ++ + S R +G TA
Sbjct: 146 -----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS-----RIVGTTAYXAP 195
Query: 212 --LGSEVSTNGDAYNYGILLLEMVTRRKPID 240
L E++ D Y++G++LLE++T +D
Sbjct: 196 EALRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 46/224 (20%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 128 HRNLVRFISI--------------AIDV-----ASAL---------DYLHHHCQEL---- 155
H N+V+ + + ++D+ ASAL YL Q L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 156 ---ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDL 212
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A + L
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEILL 177
Query: 213 GSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
G + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 177
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 184
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 223
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 48/227 (21%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKN 125
L + + F + IG G++ VY+ L VVA+K L + +G + + E LK
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 ICHRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL- 155
+ H N+V+ + + +D ASAL YL Q L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLA 120
Query: 156 ------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPE 176
Query: 210 YDLGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 48/227 (21%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKN 125
L + + F + IG G++ VY+ L VVA+K L + +G + + E LK
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 126 ICHRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL- 155
+ H N+V+ + + +D ASAL YL Q L
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLA 121
Query: 156 ------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPE 177
Query: 210 YDLGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 220
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A +
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEIL 176
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 217
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 184
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 177
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 177
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 177
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 176
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 215
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 176
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 215
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 46/222 (20%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRFISIA--------------IDVASALD--------------YLHHHCQEL------ 155
N+V+ + + D+ + +D YL Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 156 -ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLGC 177
Query: 215 E-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 215
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 181
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 46/224 (20%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 128 HRNLVRFISIA------------IDV-------ASAL---------DYLHHHCQEL---- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 156 ---ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDL 212
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A + L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEILL 179
Query: 213 GSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
G + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 177
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 218
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 177
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 218
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 177
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 176
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 217
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 175
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 76/197 (38%), Gaps = 42/197 (21%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----- 134
IG GSF VY+G + + AV +KV+ + ++F E L+ H N++ F
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPE-QFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 135 --------------------------------ISIAIDVASALDYLHHHCQELILHCDPK 162
I IA A +DYLH + I+H D K
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMK 159
Query: 163 PSNVLLDNDLFAHIGDFELARFRQEVSNPTQ-SSSNGVRRTIGYTALDYDLGSEVSTNGD 221
+N+ L L IGDF LA + S Q G + + + S D
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 222 AYNYGILLLEMVTRRKP 238
Y+YGI+L E++T P
Sbjct: 220 VYSYGIVLYELMTGELP 236
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 175
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 176
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 217
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 7 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 64
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 124
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIK 181
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 175
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 175
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 178
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HRNLVRFISIA--------------------IDVASAL---------DYLHHHCQEL--- 155
H N+V+ + + +D ASAL YL Q L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 156 ----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A +
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEIL 175
Query: 212 LGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
LG + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A + LG
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEILLG 176
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A + LG
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEILLG 176
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 215
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 46/224 (20%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNIC 127
+ + F + IG G++ VY+ L VVA+K L + +G + + E LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 128 HRNLVRFISIA--------------IDVASALD--------------YLHHHCQEL---- 155
H N+V+ + + D+ + +D YL Q L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 156 ---ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDL 212
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A + L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEILL 179
Query: 213 GSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
G + ST D ++ G + EMVTRR +F GD + R+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 9 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 66
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 67 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 126
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 127 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIK 183
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 241
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 10 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 67
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 127
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 128 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIK 184
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 242
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV--LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+K L + +G + + E LK + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ + V T+ Y A + LG
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYXHEV-VTLWYRAPEILLG 178
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 58
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIK 175
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 7 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 64
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 124
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIK 181
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 3 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 60
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 120
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 121 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIK 177
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 235
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 2 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 59
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 60 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 119
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 120 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIK 176
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 234
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 6 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 63
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 64 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 123
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 124 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIK 180
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 238
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 11 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 68
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 69 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 128
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 129 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIK 185
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 243
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
++ S LD+L + + +H D + +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 140
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 141 NILVGENLVCKVADFGLARL---IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 198 FGILLTELTTK 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 58
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIK 175
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 43 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 156
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 217 SDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 218 SDVYAFGIVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 21 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G F V+ G ++ VA+K L Q + +F+AE
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 58
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIK 175
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 21 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 195 SDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 78/199 (39%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + + VA+K+L++ + +F E L+ H N
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 131
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 192 SDVYAFGIVLYELMTGQLP 210
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 43/233 (18%)
Query: 63 YYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV-LSIQCQGASKSFMAECK 121
Y++ L++ + + +G G++ VY+ R V ++ L + +G + + E
Sbjct: 15 YFQGLMEK---YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREIS 71
Query: 122 ALKNICHRNLVRFISI--------------AIDVASALD-------------YLHH---- 150
LK + H N+V I + D+ LD YL+
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 151 --HC-QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
HC Q ILH D KP N+L+++D + DF LAR P +S ++ V T+ Y A
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR---AFGIPVRSYTHEV-VTLWYRA 187
Query: 208 LDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN 259
D +GS + ST+ D ++ G + EM+T + + + D F+ + PN
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN 240
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 16 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 43/233 (18%)
Query: 63 YYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKV-LSIQCQGASKSFMAECK 121
Y++ L++ + + +G G++ VY+ R V ++ L + +G + + E
Sbjct: 15 YFQGLMEK---YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREIS 71
Query: 122 ALKNICHRNLVRFISI--------------AIDVASALD-------------YLHH---- 150
LK + H N+V I + D+ LD YL+
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 151 --HC-QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
HC Q ILH D KP N+L+++D + DF LAR P +S ++ V T+ Y A
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR---AFGIPVRSYTHEV-VTLWYRA 187
Query: 208 LDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN 259
D +GS + ST+ D ++ G + EM+T + + + D F+ + PN
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN 240
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K I H LV+ ++
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 144 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 201 FGILLTELTTK 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 43/222 (19%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
L+ +G G F V+ G ++ VA+K L Q + +F+AE +K + H+ LVR
Sbjct: 12 LVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 136 SIA-----------IDVASALDYLHHHC------------------------QELILHCD 160
++ ++ S +D+L + +H D
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
+ +N+L+ + L I DF LAR + + ++ G + I +TA + +
Sbjct: 130 LRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 221 DAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 228
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAI-KV-LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+ K+ L + +G + + E LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 177
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 48/223 (21%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAI-KV-LSIQCQGASKSFMAECKALKNICHR 129
+ F + IG G++ VY+ L VVA+ K+ L + +G + + E LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRFISIA--------------------IDVASAL---------DYLHHHCQEL----- 155
N+V+ + + +D ASAL YL Q L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 156 --ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213
+LH D KP N+L++ + + DF LAR P ++ ++ V T+ Y A + LG
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVRTYTHEV-VTLWYRAPEILLG 176
Query: 214 SE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ ST D ++ G + EMVTRR +F GD + R+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRI 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 16 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
++ S LD+L + + +H D + +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAA 140
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 141 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 198 FGILLTELTTK 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 16 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 133
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 134 NILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 191 FGILLTELTTK 201
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 36 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 149
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 210 SDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 157
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 218 SDVYAFGIVLYELMTGQLP 236
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----- 134
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 135 ---ISIAIDV---ASALDYLHHHCQELI------------------------LHCDPKPS 164
I I I+ S LD+L + + +H D + +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 144 NILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 201 FGILLTELTTK 211
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G F VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE-V 188
+++ + + +AS + YL +H D N+L++++L + DF L+RF +E
Sbjct: 116 TVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS 172
Query: 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
S+PT++SS G + I +TA + + ++ DA++YGI++ E+++
Sbjct: 173 SDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 45/229 (19%)
Query: 53 LTLRNAIPKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVLSIQ 108
LT P + +LK T+ + ++G G+F VY+G++ + + VAIK+L+ +
Sbjct: 20 LTPSGTAPNQAQLRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-E 77
Query: 109 CQG--ASKSFMAECKALKNICHRNLVRFISIAIDV-----------ASALDYLHHH---- 151
G A+ FM E + ++ H +LVR + + + L+Y+H H
Sbjct: 78 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNI 137
Query: 152 --------CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
C ++ ++H D NVL+ + I DF LAR + +
Sbjct: 138 GSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEK 195
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ +++G + I + AL+ + + D ++YG+ + E++T KP D
Sbjct: 196 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRN------- 130
IG GSF VY+G + VA+K+L++ + +F E L+ H N
Sbjct: 16 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 131 ------------------------------LVRFISIAIDVASALDYLHHHCQELILHCD 160
+++ I IA A +DYLH I+H D
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L DL IGDF LA + S Q +G + + + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 190 SDVYAFGIVLYELMTGQLP 208
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 19 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 136
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 137 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 194 FGILLTELTTK 204
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 41/199 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 275 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 392
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 393 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 225 YGILLLEMVTR-RKPIDFM 242
+GILL E+ T+ R P M
Sbjct: 450 FGILLTELTTKGRVPYPGM 468
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 310 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 367 FGILLTELTTK 377
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 310 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 367 FGILLTELTTK 377
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----- 134
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 135 ---ISIAIDV---ASALDYLHHHCQELI------------------------LHCDPKPS 164
I I I+ S LD+L + + +H D + +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 144 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 201 FGILLTELTTK 211
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 17 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 134
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 135 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 192 FGILLTELTTK 202
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 310 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 367 FGILLTELTTK 377
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 144 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 201 FGILLTELTTK 211
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 15 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 132
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 133 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 190 FGILLTELTTK 200
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 44/238 (18%)
Query: 61 KEYYESLLKAT-DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
K ++E + + L+ +G G V+ G ++ VA+K L Q + +F+AE
Sbjct: 1 KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAE 58
Query: 120 CKALKNICHRNLVRFISIA-----------IDVASALDYLHHHC---------------- 152
+K + H+ LVR ++ ++ S +D+L
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 153 --------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
+ +H D + +N+L+ + L I DF LAR + + ++ G + I
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDAEXTAREGAKFPIK 175
Query: 205 YTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
+TA + + D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 144 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 201 FGILLTELTTK 211
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIAI 139
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 D--VASALDYLHHHC---------------QELI------------------LHCDPKPS 164
+ + ++Y+ C +L+ +H D + +
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 144 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 201 FGILLTELTTK 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNI-------- 126
+IG G F VY G + NR AIK LS I ++F+ E ++ +
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 127 ------------------CHRNLVRFI-------------SIAIDVASALDYLHHHCQEL 155
CH +L++FI S + VA ++YL ++
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQK 144
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + R + +TAL+
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE-V 188
+++ + + +AS + YL +H D N+L++++L + DF L+RF +E
Sbjct: 114 TVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS 170
Query: 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
S+PT +SS G + I +TA + + ++ DA++YGI++ E+++
Sbjct: 171 SDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 149
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 207 DVWAFGVLLWEIAT 220
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 43/222 (19%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
L+ +G G F V+ G ++ VA+K L Q + +F+AE +K + H+ LVR
Sbjct: 13 LVERLGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 136 SIA-----------IDVASALDYLHHHC------------------------QELILHCD 160
++ ++ S +D+L + +H +
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
+ +N+L+ + L I DF LAR + + ++ G + I +TA + +
Sbjct: 131 LRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 221 DAYNYGILLLEMVTR-RKPIDFMFEGDL--NLHNFARMAFPN 259
D +++GILL E+VT R P M ++ NL RM P+
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 229
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 140
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 198 DVWAFGVLLWEIAT 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----- 134
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 135 ---------------------------------ISIAIDVASALDYLHHHCQELILHCDP 161
+ +A +AS + Y+ +H D
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 162 KPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGD 221
+ +N+L+ +L + DF LAR + + ++ G + I +TA + L + D
Sbjct: 141 RAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 222 AYNYGILLLEMVTR 235
+++GILL E+ T+
Sbjct: 198 VWSFGILLTELTTK 211
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAA 143
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF LAR + + ++ G + I +TA + L + D ++
Sbjct: 144 NILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 201 FGILLTELTTK 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVLSIQCQG--AS 113
P + +LK T+ + ++G G+F VY+G++ + + VAIK+L+ + G A+
Sbjct: 4 PNQAQLRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKAN 61
Query: 114 KSFMAECKALKNICHRNLVRFISIAIDV-----------ASALDYLHHH----------- 151
FM E + ++ H +LVR + + + L+Y+H H
Sbjct: 62 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN 121
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ + I DF LAR + + + +++G
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEKEYNADGG 179
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ + + D ++YG+ + E++T KP D
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL---MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRNLVRF--- 134
IG GSF VY+G + VA+K+L++ + +F E L+ H N++ F
Sbjct: 20 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCD 160
I IA A +DYLH I+H D
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 133
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L D IGDF LA + S Q +G + + + S
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 194 SDVYAFGIVLYELMTGQLP 212
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 60/234 (25%)
Query: 63 YYESLLKATD-GFPLINL-----IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK-- 114
Y++ + D P +L IG GSF V++ + + + VA+K+L Q A +
Sbjct: 22 YFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVN 79
Query: 115 SFMAECKALKNICHRNLVRF---------------------------------------- 134
F+ E +K + H N+V F
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
+S+A DVA ++YLH+ I+H + K N+L+D + DF L+R + T
Sbjct: 140 LSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS----TFL 194
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLN 248
SS T + A + + D Y++G++L E+ T ++P G+LN
Sbjct: 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-----GNLN 243
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKK 152
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 41/198 (20%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
L+ +G G F V+ G ++ N VA+K L ++F+ E +K + H LVR
Sbjct: 17 LVKRLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLY 74
Query: 136 SIA------------IDVASALDYLHHH------CQELI------------------LHC 159
++ + S LD+L +LI +H
Sbjct: 75 AVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR 134
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D + +NVL+ L I DF LAR + + ++ G + I +TA + +
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 220 GDAYNYGILLLEMVTRRK 237
D +++GILL E+VT K
Sbjct: 192 SDVWSFGILLYEIVTYGK 209
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 88/226 (38%), Gaps = 51/226 (22%)
Query: 59 IPKEYYE----SLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK 114
+P E Y L +AT+ F LIG G F VY+GV + A VA+K + + +
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIE 80
Query: 115 SFMAECKALKNICHRNLVRFIS-------------------------------------- 136
F E + L H +LV I
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 137 ---IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
I I A L YLH I+H D K N+LLD + I DF +++ E+
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
V+ T+GY +Y + ++ D Y++G++L E++ R I
Sbjct: 198 XXV--VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 40/191 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISIA- 138
+G G F V+ G ++ VAIK L + ++F+ E + +K + H LV+ ++
Sbjct: 193 LGQGCFGEVWMGTWN-GTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 139 ----------IDVASALDYLHHHCQELI------------------------LHCDPKPS 164
+ S LD+L + + +H D + +
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 310
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
N+L+ +L + DF L R + + ++ G + I +TA + L + D ++
Sbjct: 311 NILVGENLVCKVADFGLGRL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 225 YGILLLEMVTR 235
+GILL E+ T+
Sbjct: 368 FGILLTELTTK 378
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRNLVRF--- 134
IG GSF VY+G + VA+K+L++ + +F E L+ H N++ F
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCD 160
I IA A +DYLH I+H D
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L D IGDF LA + S Q +G + + + S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 206 SDVYAFGIVLYELMTGQLP 224
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 60/234 (25%)
Query: 63 YYESLLKATD-GFPLINL-----IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK-- 114
Y++ + D P +L IG GSF V++ + + + VA+K+L Q A +
Sbjct: 22 YFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVN 79
Query: 115 SFMAECKALKNICHRNLVRF---------------------------------------- 134
F+ E +K + H N+V F
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
+S+A DVA ++YLH+ I+H D K N+L+D + DF L+R + ++
Sbjct: 140 LSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLN 248
++ G + L + +E S D Y++G++L E+ T ++P G+LN
Sbjct: 199 AA-GTPEWMAPEVLRDEPSNEKS---DVYSFGVILWELATLQQPW-----GNLN 243
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 440 DVWAFGVLLWEIAT 453
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 46/199 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRNLVRF--- 134
IG GSF VY+G + + VA+K+L++ + +F E L+ H N++ F
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCD 160
I IA A +DYLH I+H D
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTN 219
K +N+ L D IGDF LA + S Q +G + + + S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 220 GDAYNYGILLLEMVTRRKP 238
D Y +GI+L E++T + P
Sbjct: 206 SDVYAFGIVLYELMTGQLP 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKK 152
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 212
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 46/204 (22%)
Query: 78 NLIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH----- 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 129 ------------------------RNLVR----------FISIAIDVASALDYLHHHCQE 154
RN +R I + VA + YL +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 150
Query: 155 LILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
+H D N +LD + DF LAR + + + G + + + AL+
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 215 EVSTNGDAYNYGILLLEMVTRRKP 238
+ +T D +++G+LL E++TR P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 88/226 (38%), Gaps = 51/226 (22%)
Query: 59 IPKEYYE----SLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK 114
+P E Y L +AT+ F LIG G F VY+GV + A VA+K + + +
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIE 80
Query: 115 SFMAECKALKNICHRNLVRFIS-------------------------------------- 136
F E + L H +LV I
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 137 ---IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
I I A L YLH I+H D K N+LLD + I DF +++ E+
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
V+ T+GY +Y + ++ D Y++G++L E++ R I
Sbjct: 198 XXV--VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKK 153
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 46/199 (23%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVR-- 133
++ +G G++ VY+G L +VA+K + ++ + GA + + E LK++ H N+V
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 134 ------------FISIAIDVASALD-----------------------YLHHHCQELILH 158
F + D+ LD Y H ++ +LH
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLH 123
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVS 217
D KP N+L++ + DF LAR + S PT++ N V T+ Y D LGS + S
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAK---SIPTKTYDNEV-VTLWYRPPDILLGSTDYS 179
Query: 218 TNGDAYNYGILLLEMVTRR 236
T D + G + EM T R
Sbjct: 180 TQIDMWGVGCIFYEMATGR 198
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 340
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 398 DVWAFGVLLWEIAT 411
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY+GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRN 343
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + ++ S
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 401 DVWAFGVLLWEIAT 414
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 46/204 (22%)
Query: 78 NLIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH----- 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 129 ------------------------RNLVR----------FISIAIDVASALDYLHHHCQE 154
RN +R I + VA + YL +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 147
Query: 155 LILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
+H D N +LD + DF LAR + + + G + + + AL+
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 215 EVSTNGDAYNYGILLLEMVTRRKP 238
+ +T D +++G+LL E++TR P
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 46/204 (22%)
Query: 78 NLIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH----- 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 129 ------------------------RNLVR----------FISIAIDVASALDYLHHHCQE 154
RN +R I + VA + YL +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 144
Query: 155 LILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
+H D N +LD + DF LAR + + + G + + + AL+
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 215 EVSTNGDAYNYGILLLEMVTRRKP 238
+ +T D +++G+LL E++TR P
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 53/229 (23%)
Query: 47 SKQPLR----LTLRNAIPKEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAI 102
++QPL + L A+PK+ + +L D L IG G+F V+ G + +VA+
Sbjct: 88 TQQPLTKKSGVVLHRAVPKDKW--VLNHED-LVLGEQIGRGNFGEVFSGRLRADNTLVAV 144
Query: 103 KVLSIQCQGASKS-FMAECKALKNICHRNLVRFISIAI---------------------- 139
K K+ F+ E + LK H N+VR I +
Sbjct: 145 KSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204
Query: 140 ----------------DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
D A+ ++YL C +H D N L+ I DF ++R
Sbjct: 205 TEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 184 FRQEVSNPTQSSSNGVRRT-IGYTALDYDLGSEVSTNGDAYNYGILLLE 231
E ++ ++S G+R+ + +TA + S+ D +++GILL E
Sbjct: 262 ---EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKK 153
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 46/204 (22%)
Query: 78 NLIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH----- 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 129 ------------------------RNLVR----------FISIAIDVASALDYLHHHCQE 154
RN +R I + VA + YL +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 149
Query: 155 LILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
+H D N +LD + DF LAR + + + G + + + AL+
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 215 EVSTNGDAYNYGILLLEMVTRRKP 238
+ +T D +++G+LL E++TR P
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + YL +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKK 172
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 232
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 233 FTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + YL +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKK 171
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 231
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 232 FTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
R I + S L++LH Q I++ D KP NVLLD+D I D LA E+
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA---VEL-KAG 342
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Q+ + G T G+ A + LG E + D + G+ L EM+ R P
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
R I + S L++LH Q I++ D KP NVLLD+D I D LA E+
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA---VEL-KAG 342
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Q+ + G T G+ A + LG E + D + G+ L EM+ R P
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
R I + S L++LH Q I++ D KP NVLLD+D I D LA E+
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA---VEL-KAG 342
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Q+ + G T G+ A + LG E + D + G+ L EM+ R P
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 53/229 (23%)
Query: 47 SKQPLR----LTLRNAIPKEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAI 102
++QPL + L A+PK+ + +L D L IG G+F V+ G + +VA+
Sbjct: 88 TQQPLTKKSGVVLHRAVPKDKW--VLNHED-LVLGEQIGRGNFGEVFSGRLRADNTLVAV 144
Query: 103 KVLSIQCQGASKS-FMAECKALKNICHRNLVRFISIAI---------------------- 139
K K+ F+ E + LK H N+VR I +
Sbjct: 145 KSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 204
Query: 140 ----------------DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
D A+ ++YL C +H D N L+ I DF ++R
Sbjct: 205 TEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 184 FRQEVSNPTQSSSNGVRRT-IGYTALDYDLGSEVSTNGDAYNYGILLLE 231
E ++ ++S G+R+ + +TA + S+ D +++GILL E
Sbjct: 262 ---EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
R I + S L++LH Q I++ D KP NVLLD+D I D LA E+
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA---VEL-KAG 342
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Q+ + G T G+ A + LG E + D + G+ L EM+ R P
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 50/202 (24%)
Query: 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--- 134
++G G+F V + + VAIK I+ + K+F+ E + L + H N+V+
Sbjct: 14 EVVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 135 -----------------------------------ISIAIDVASALDYLHHHCQELILHC 159
+S + + + YLH + ++H
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 160 DPKPSNVLL-DNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D KP N+LL I DF A Q T ++N + + + A + GS S
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTACDIQ-----THMTNN--KGSAAWMAPEVFEGSNYSE 182
Query: 219 NGDAYNYGILLLEMVTRRKPID 240
D +++GI+L E++TRRKP D
Sbjct: 183 KCDVFSWGIILWEVITRRKPFD 204
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 50/202 (24%)
Query: 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--- 134
++G G+F V + + VAIK I+ + K+F+ E + L + H N+V+
Sbjct: 15 EVVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 135 -----------------------------------ISIAIDVASALDYLHHHCQELILHC 159
+S + + + YLH + ++H
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 160 DPKPSNVLL-DNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D KP N+LL I DF A Q T ++N + + + A + GS S
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTACDIQ-----THMTNN--KGSAAWMAPEVFEGSNYSE 183
Query: 219 NGDAYNYGILLLEMVTRRKPID 240
D +++GI+L E++TRRKP D
Sbjct: 184 KCDVFSWGIILWEVITRRKPFD 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 41/198 (20%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
L+ +G G F V+ G ++ N VA+K L + ++F+ E +K + H LVR
Sbjct: 16 LVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLY 73
Query: 136 SIA------------IDVASALDYLHHH------CQELI------------------LHC 159
++ + S LD+L +LI +H
Sbjct: 74 AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR 133
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D + +NVL+ L I DF LAR + + ++ G + I +TA + +
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 220 GDAYNYGILLLEMVTRRK 237
+ +++GILL E+VT K
Sbjct: 191 SNVWSFGILLYEIVTYGK 208
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + +L +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKK 158
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 218
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 219 FTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKK 154
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + +L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKK 151
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 211
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKK 153
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKK 153
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 46/203 (22%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICH------ 128
+IG G F VY G D + A+K L+ I G F+ E +K+ H
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 129 -----------------------RNLVR----------FISIAIDVASALDYLHHHCQEL 155
RN +R I + VA + +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKK 154
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
+H D N +LD + DF LAR + + + G + + + AL+ +
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
+T D +++G+LL E++TR P
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 40/200 (20%)
Query: 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRF 134
+IG G F VY G D + A+K L+ I G F+ E +K+ H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 135 ISIAIDVASA----LDYLHH--------------HCQELI------------------LH 158
+ I + + L Y+ H ++LI +H
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 215
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D N +LD + DF LAR + + + G + + + AL+ + +T
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 275
Query: 219 NGDAYNYGILLLEMVTRRKP 238
D +++G+LL E++TR P
Sbjct: 276 KSDVWSFGVLLWELMTRGAP 295
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 46/194 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFISI-- 137
+G G + VY GV+ VA+K L + F+ E +K I H NLV+ + +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 138 -------------------------------------AIDVASALDYLHHHCQELILHCD 160
A ++SA++YL ++ +H D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRD 155
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF L+R ++ T ++ G + I +TA + + S
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 221 DAYNYGILLLEMVT 234
D + +G+LL E+ T
Sbjct: 213 DVWAFGVLLWEIAT 226
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 42/191 (21%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----- 134
+G G F V+ ++ VA+K + ++F+AE +K + H LV+
Sbjct: 23 LGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 135 ------ISIAIDVASALDYLH------HHCQELI------------------LHCDPKPS 164
I+ + S LD+L +LI +H D + +
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 140
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD-YDLGSEVSTNGDAY 223
N+L+ L I DF LAR + + ++ G + I +TA + + GS + D +
Sbjct: 141 NILVSASLVCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFGS-FTIKSDVW 196
Query: 224 NYGILLLEMVT 234
++GILL+E+VT
Sbjct: 197 SFGILLMEIVT 207
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 54/222 (24%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-----GASKSFMAECKALKNICHRNL 131
++ +G G F VY+ +VAIK + + + G +++ + E K L+ + H N+
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 132 VRF---------ISIAID----------------------------VASALDYLHHHCQE 154
+ IS+ D L+YLH H
Sbjct: 75 IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW-- 132
Query: 155 LILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
ILH D KP+N+LLD + + DF LA+ +P ++ + V T Y A + G+
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAK---SFGSPNRAYXHQV-VTRWYRAPELLFGA 187
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
+ G D + G +L E++ R + F+ GD +L R+
Sbjct: 188 RMYGVGVDMWAVGCILAELLLR---VPFL-PGDSDLDQLTRI 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 40/202 (19%)
Query: 74 FPLINLIGVGSFDAVY---QGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRN 130
+ +++ +G G VY + ++ A+ AI + + + K F E + H+N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 131 LVRFISI-----------------------------AIDVA-----SALDYLHHHCQELI 156
+V I + ++D A LD + H I
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D KP N+L+D++ I DF +A+ E S + +N V T+ Y + + G
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETS---LTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 217 STNGDAYNYGILLLEMVTRRKP 238
D Y+ GI+L EM+ P
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPP 211
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
+ + A DVA +DYL Q+ +H D N+L+ + A I DF L+R ++ T
Sbjct: 143 QLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 199
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
R + + A++ S +TN D ++YG+LL E+V+
Sbjct: 200 MG-----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 45/210 (21%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNI 126
+ ++ F + +G G++ VY+G+ VA+K + + + G + + E +K +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 127 CHRNLVRFISIAI--------------DVASALD-----------------YLHHH---- 151
H N+VR + D+ +D Y
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 152 ---CQE-LILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
C E ILH D KP N+L++ +GDF LAR P + S+ V T+ Y A
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR---AFGIPVNTFSSEV-VTLWYRA 176
Query: 208 LDYDLGSEV-STNGDAYNYGILLLEMVTRR 236
D +GS ST+ D ++ G +L EM+T +
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 18/107 (16%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
+ + A DVA +DYL Q+ +H D N+L+ + A I DF L+R QEV
Sbjct: 133 QLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR-GQEVY--- 185
Query: 193 QSSSNGVRRTIG-----YTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
V++T+G + A++ S +TN D ++YG+LL E+V+
Sbjct: 186 ------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 44/199 (22%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA--SKSFMAECKALKNICHRNLVR 133
+ IG G F V+ G + LN+ VAIK + +GA + F+ E + + + H LV+
Sbjct: 11 FVQEIGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 134 FISIAIDVAS---ALDYLHHHC--------------------------------QELILH 158
+ ++ A +++ H C + ++H
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 126
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D N L+ + + DF + RF V + +SS G + + + + + S S+
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 219 NGDAYNYGILLLEMVTRRK 237
D +++G+L+ E+ + K
Sbjct: 184 KSDVWSFGVLMWEVFSEGK 202
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 45/229 (19%)
Query: 53 LTLRNAIPKEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA 112
LT P + +LK T+ F I ++G G+F VY+G++ V I V ++ + A
Sbjct: 31 LTPSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREA 89
Query: 113 S-----KSFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH---- 151
+ K + E C+ L IC + V+ I+ + LDY+ H
Sbjct: 90 TSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNI 148
Query: 152 --------CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
C ++ ++H D NVL+ I DF LA+ +
Sbjct: 149 GSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEK 206
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ + G + I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 207 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 44/199 (22%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA--SKSFMAECKALKNICHRNLVR 133
+ IG G F V+ G + LN+ VAIK + +GA + F+ E + + + H LV+
Sbjct: 14 FVQEIGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 134 FISIAIDVAS---ALDYLHHHC--------------------------------QELILH 158
+ ++ A +++ H C + ++H
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D N L+ + + DF + RF V + +SS G + + + + + S S+
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 219 NGDAYNYGILLLEMVTRRK 237
D +++G+L+ E+ + K
Sbjct: 187 KSDVWSFGVLMWEVFSEGK 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 50/202 (24%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA--SKSFMAECKALKNICHRNLVR 133
+ IG G F V+ G + LN+ VAIK + +GA + F+ E + + + H LV+
Sbjct: 12 FVQEIGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 134 F--------------------------------------ISIAIDVASALDYLHHHCQEL 155
+ + +DV + YL C
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
++H D N L+ + + DF + RF V + +SS G + + + + + S
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 216 VSTNGDAYNYGILLLEMVTRRK 237
S+ D +++G+L+ E+ + K
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGK 203
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 44/199 (22%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA--SKSFMAECKALKNICHRNLVR 133
+ IG G F V+ G + LN+ VAIK + +GA + F+ E + + + H LV+
Sbjct: 9 FVQEIGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 134 FISIAIDVAS---ALDYLHHHC--------------------------------QELILH 158
+ ++ A +++ H C + ++H
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D N L+ + + DF + RF V + +SS G + + + + + S S+
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 219 NGDAYNYGILLLEMVTRRK 237
D +++G+L+ E+ + K
Sbjct: 182 KSDVWSFGVLMWEVFSEGK 200
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 42/191 (21%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----- 134
+G G F V+ ++ VA+K + ++F+AE +K + H LV+
Sbjct: 196 LGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 135 ------ISIAIDVASALDYLH------HHCQELI------------------LHCDPKPS 164
I+ + S LD+L +LI +H D + +
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 313
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD-YDLGSEVSTNGDAY 223
N+L+ L I DF LAR + + ++ G + I +TA + + GS + D +
Sbjct: 314 NILVSASLVCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFGS-FTIKSDVW 369
Query: 224 NYGILLLEMVT 234
++GILL+E+VT
Sbjct: 370 SFGILLMEIVT 380
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLL-----DNDL---FAHIGDFELARFR 185
++ A+ +A ++YLH I+H D K SN+L+ + DL I DF LAR
Sbjct: 107 LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-- 164
Query: 186 QEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
E T+ S+ G + A + S S D ++YG+LL E++T P
Sbjct: 165 -EWHRTTKMSAAG---AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 44/199 (22%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA--SKSFMAECKALKNICHRNLVR 133
+ IG G F V+ G + LN+ VAIK + +GA + F+ E + + + H LV+
Sbjct: 11 FVQEIGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 134 FISIAIDVAS---ALDYLHHHC--------------------------------QELILH 158
+ ++ A +++ H C + ++H
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIH 126
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D N L+ + + DF + RF V + +SS G + + + + + S S+
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 219 NGDAYNYGILLLEMVTRRK 237
D +++G+L+ E+ + K
Sbjct: 184 KSDVWSFGVLMWEVFSEGK 202
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 79/197 (40%), Gaps = 40/197 (20%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
+ IG G F V+ G + LN+ VAIK + + + F+ E + + + H LV+
Sbjct: 31 FVQEIGSGQFGLVHLGYW-LNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 136 SIAIDVAS---ALDYLHHHC--------------------------------QELILHCD 160
+ ++ A +++ H C + ++H D
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 148
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N L+ + + DF + RF V + +SS G + + + + + S S+
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 221 DAYNYGILLLEMVTRRK 237
D +++G+L+ E+ + K
Sbjct: 206 DVWSFGVLMWEVFSEGK 222
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 48/194 (24%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
L+ IG G F V G + N+ VA+K I+ +++F+AE + + H NLV+ +
Sbjct: 10 LLQTIGKGEFGDVMLGDYRGNK--VAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 136 SIAID-------------VASALDYLHHH-----------------CQEL-------ILH 158
+ ++ S +DYL C+ + +H
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 125
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D NVL+ D A + DF L + S+ + + + +TA + + ST
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 219 NGDAYNYGILLLEM 232
D +++GILL E+
Sbjct: 179 KSDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 48/196 (24%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
L+ IG G F V G + N+ VA+K I+ +++F+AE + + H NLV+ +
Sbjct: 25 LLQTIGKGEFGDVMLGDYRGNK--VAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 136 SIAIDVASAL-------------DYLHHH-----------------CQEL-------ILH 158
+ ++ L DYL C+ + +H
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D NVL+ D A + DF L + S+ + + + +TA + + ST
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 219 NGDAYNYGILLLEMVT 234
D +++GILL E+ +
Sbjct: 194 KSDVWSFGILLWEIYS 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 85/220 (38%), Gaps = 65/220 (29%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
L+ IG G F V G + N+ VA+K I+ +++F+AE + + H NLV+ +
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGNK--VAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 136 SIAIDVASAL-------------DYLHHH-----------------CQEL-------ILH 158
+ ++ L DYL C+ + +H
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D NVL+ D A + DF L + S+ + + + +TA + + ST
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFST 365
Query: 219 NGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP 258
D +++GILL E +++F R+ +P
Sbjct: 366 KSDVWSFGILLWE-----------------IYSFGRVPYP 388
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 7 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL 120
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 181 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 228
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 45/236 (19%)
Query: 46 PSKQPLRLTLRNAIPKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVA 101
P+ + L P + +LK T+ F I ++G G+F VY+G++ + + VA
Sbjct: 15 PTTENLYFQGSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 73
Query: 102 IKVL-SIQCQGASKSFMAE------------CKALKNICHRNLVRFISIAIDVASALDYL 148
IK L A+K + E C+ L IC + V+ I+ + LDY+
Sbjct: 74 IKELREATSPKANKEILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYV 132
Query: 149 HHH------------CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFR 185
H C ++ ++H D NVL+ I DF LA+
Sbjct: 133 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
Query: 186 QEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ + + G + I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 193 G--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 48/196 (24%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
L+ IG G F V G + N+ VA+K I+ +++F+AE + + H NLV+ +
Sbjct: 16 LLQTIGKGEFGDVMLGDYRGNK--VAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 136 SIAIDVASAL-------------DYLHHH-----------------CQEL-------ILH 158
+ ++ L DYL C+ + +H
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 131
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D NVL+ D A + DF L + S+ + + + +TA + + ST
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 219 NGDAYNYGILLLEMVT 234
D +++GILL E+ +
Sbjct: 185 KSDVWSFGILLWEIYS 200
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
LD+LH +C I+H D KP N+L+ + + DF LAR Q + + V T+
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALDPVVVTL 175
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Y A + L S +T D ++ G + EM RRKP+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPL 210
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
+ + A DVA +DYL Q+ +H + N+L+ + A I DF L+R ++ T
Sbjct: 140 QLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKT 196
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
R + + A++ S +TN D ++YG+LL E+V+
Sbjct: 197 MG-----RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I+ + LDY+ H C ++
Sbjct: 80 VMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 196
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I+ + LDY+ H C ++
Sbjct: 70 VMASVDNPHVCRLL-GICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 186
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF-RQEV 188
+++ + + +A+ + YL +H D N+L++++L + DF L+RF +
Sbjct: 133 TVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
S+PT +S+ G + I +TA + + ++ D ++YGI++ E+++
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 4 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I+ + LDY+ H
Sbjct: 63 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 179
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
LD+LH +C I+H D KP N+L+ + + DF LAR Q + V T+
Sbjct: 132 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALTPVVVTL 183
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Y A + L S +T D ++ G + EM RRKP+
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPL 218
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 7 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 65
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I+ + LDY+ H
Sbjct: 66 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 182
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 7 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 65
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I+ + LDY+ H
Sbjct: 66 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 182
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 3 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 56
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 116
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 117 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 177 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 11 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 69
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I+ + LDY+ H
Sbjct: 70 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 186
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 7 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 120
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 181 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 6 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 64
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I+ + LDY+ H
Sbjct: 65 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 181
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 11 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 64
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 124
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 125 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 185 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 232
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I+ + LDY+ H C ++
Sbjct: 64 VMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 180
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I+ + LDY+ H C ++
Sbjct: 70 VMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 186
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 7 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 65
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I+ + LDY+ H
Sbjct: 66 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 182
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 10 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 68
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I+ + LDY+ H
Sbjct: 69 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 127
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 185
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 35 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 88
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 148
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 209 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 256
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 2 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 55
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 115
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 116 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 176 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 223
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 8 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 61
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 121
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 182 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 229
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 4 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 178 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 225
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 9 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 62
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 122
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 183 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 10 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 63
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 123
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 184 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 231
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 4 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 178 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I+ + LDY+ H C ++
Sbjct: 67 VMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 183
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 132 VRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191
R + A ++ L+ LH +E I++ D KP N+LLD+ I D LA V P
Sbjct: 286 ARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA-----VHVP 337
Query: 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ G T+GY A + + + D + G LL EM+ + P
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
LD+LH +C I+H D KP N+L+ + + DF LAR Q + V T+
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALAPVVVTL 175
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Y A + L S +T D ++ G + EM RRKP+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPL 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 47/213 (22%)
Query: 76 LINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNL 131
+ +G G+F +V Y + D VVA+K L + + F E + LK++ H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 132 VRFISIA--------------IDVASALDYLHHHCQEL---------------------- 155
V++ + + S DYL H + +
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 156 -ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
+H D N+L++N+ IGDF L + + + G I + A + S
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESPIFWYAPESLTES 210
Query: 215 EVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
+ S D +++G++L E+ T + P +FM
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 243
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 123 LKNICHR----NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGD 178
L++I H R I + D AL++ H Q I+H D KP+N+++ + D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMD 159
Query: 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
F +AR + N + + + V T Y + + G V D Y+ G +L E++T P
Sbjct: 160 FGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 239 IDFMFEGD 246
F GD
Sbjct: 219 ----FTGD 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 132 VRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191
R + A ++ L+ LH +E I++ D KP N+LLD+ I D LA V P
Sbjct: 286 ARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA-----VHVP 337
Query: 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ G T+GY A + + + D + G LL EM+ + P
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 123 LKNICHR----NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGD 178
L++I H R I + D AL++ H Q I+H D KP+N+L+ + D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVD 159
Query: 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
F +AR + N ++ V T Y + + G V D Y+ G +L E++T P
Sbjct: 160 FGIARAIADSGNSVXQTA-AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 239 IDFMFEGD 246
F GD
Sbjct: 219 ----FTGD 222
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 47/213 (22%)
Query: 76 LINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNL 131
+ +G G+F +V Y + D VVA+K L + + F E + LK++ H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 132 VRFISIA--------------IDVASALDYLHHHCQEL---------------------- 155
V++ + + S DYL H + +
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 156 -ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
+H D N+L++N+ IGDF L + + + G I + A + S
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG-ESPIFWYAPESLTES 210
Query: 215 EVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
+ S D +++G++L E+ T + P +FM
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 243
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I + LDY+ H C ++
Sbjct: 71 VMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 187
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 123 LKNICHR----NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGD 178
L++I H R I + D AL++ H Q I+H D KP+N+++ + D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMD 159
Query: 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
F +AR + N + + + V T Y + + G V D Y+ G +L E++T P
Sbjct: 160 FGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 239 IDFMFEGD 246
F GD
Sbjct: 219 ----FTGD 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 123 LKNICHR----NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGD 178
L++I H R I + D AL++ H Q I+H D KP+N+++ + D
Sbjct: 120 LRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMD 176
Query: 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
F +AR + N + + + V T Y + + G V D Y+ G +L E++T P
Sbjct: 177 FGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 239 IDFMFEGD 246
F GD
Sbjct: 236 ----FTGD 239
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 123 LKNICHR----NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGD 178
L++I H R I + D AL++ H Q I+H D KP+N+++ + D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMD 159
Query: 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
F +AR + N + + + V T Y + + G V D Y+ G +L E++T P
Sbjct: 160 FGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 239 IDFMFEGD 246
F GD
Sbjct: 219 ----FTGD 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 123 LKNICHR----NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGD 178
L++I H R I + D AL++ H Q I+H D KP+N+++ + D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMD 159
Query: 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
F +AR + N + + + V T Y + + G V D Y+ G +L E++T P
Sbjct: 160 FGIARAIADSGN-SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 239 IDFMFEGD 246
F GD
Sbjct: 219 ----FTGD 222
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
LD+LH +C I+H D KP N+L+ + + DF LAR Q + V T+
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALFPVVVTL 175
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Y A + L S +T D ++ G + EM RRKP+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPL 210
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 7 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 65
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I + LDY+ H
Sbjct: 66 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 182
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 91/235 (38%), Gaps = 65/235 (27%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 4 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQE------VSNPT 192
+H D N+L++N+ IGDF L + + V P
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
+S I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 178 ESP-------IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANSF 194
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + S + D + G ++ ++V P +F+ + L ++F
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
Query: 254 RMAFPN 259
FP
Sbjct: 255 EKFFPK 260
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I + LDY+ H C ++
Sbjct: 74 VMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 190
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I + LDY+ H C ++
Sbjct: 71 VMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 187
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 6 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 64
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I + LDY+ H
Sbjct: 65 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF LA+ + + + G
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGG 181
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
LD+LH H ++H D KP N+L+ + + DF LAR Q + V T+
Sbjct: 132 GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVVVTL 183
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
Y A + L S +T D ++ G + EM RRKP +F G ++ ++
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKI 231
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I + LDY+ H C ++
Sbjct: 70 VMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF LA+ + + + G + I +
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWM 186
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
LD+LH H ++H D KP N+L+ + + DF LAR Q + V T+
Sbjct: 132 GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVVVTL 183
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
Y A + L S +T D ++ G + EM RRKP +F G ++ ++
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKI 231
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
LD+LH H ++H D KP N+L+ + + DF LAR Q + V T+
Sbjct: 132 GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVVVTL 183
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
Y A + L S +T D ++ G + EM RRKP +F G ++ ++
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKI 231
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 47/200 (23%)
Query: 78 NLIGVGSFDAVYQGVFDLN----RAVVAIKVLSIQCQGASK-SFMAECKALKNICHRNLV 132
+IG G F VY+G+ + VAIK L + F+ E + H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 133 RFISI-----------------AID---------------------VASALDYLHHHCQE 154
R + A+D +A+ + YL +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN-- 167
Query: 155 LILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
+H D N+L++++L + DF L+R ++ T ++S G + I +TA +
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG-KIPIRWTAPEAISYR 225
Query: 215 EVSTNGDAYNYGILLLEMVT 234
+ ++ D +++GI++ E++T
Sbjct: 226 KFTSASDVWSFGIVMWEVMT 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 7 PTQFEERHLK------FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S +YL H + +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL 120
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H D N+L++N+ IGDF L + + + G
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 181 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 43/226 (19%)
Query: 55 LRNAIPKEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLN----RAVVAIKVLSIQCQ 110
+ A P + +LK T+ + ++G G+F VY+G++ + + VAIKVL
Sbjct: 1 MSGAAPNQALLRILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS 59
Query: 111 -GASKSFMAECKA-----------LKNICHRNLVRFISIAIDVASALDYLHHH------- 151
A+K + E L IC + V+ ++ + LD++ +
Sbjct: 60 PKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQ 119
Query: 152 -----CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195
C ++ ++H D NVL+ + I DF LAR + T+
Sbjct: 120 DLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD--IDETEYH 177
Query: 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
++G + I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 178 ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 52/191 (27%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----- 134
+G G F V+ ++ VA+K + ++F+AE +K + H LV+
Sbjct: 190 LGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 135 ------ISIAIDVASALDYLH------HHCQELI------------------LHCDPKPS 164
I+ + S LD+L +LI +H D + +
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 307
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD-YDLGSEVSTNGDAY 223
N+L+ L I DF LAR G + I +TA + + GS + D +
Sbjct: 308 NILVSASLVCKIADFGLARV-------------GAKFPIKWTAPEAINFGS-FTIKSDVW 353
Query: 224 NYGILLLEMVT 234
++GILL+E+VT
Sbjct: 354 SFGILLMEIVT 364
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 54/200 (27%)
Query: 80 IGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
+G G F V ++G +D VAIK++ + + F+ E K + N+ H LV+
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 136 SIAI--------------------------------------DVASALDYLHHHCQELIL 157
+ DV A++YL + L
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217
H D N L+++ + DF L+R+ V + ++SS G + + ++ + + S+ S
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 218 TNGDAYNYGILLLEMVTRRK 237
+ D + +G+L+ E+ + K
Sbjct: 200 SKSDIWAFGVLMWEIYSLGK 219
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE-V 188
++R I+ + + ++Y+H N+L++++L + DF L+RF ++
Sbjct: 113 GMLRGIAAGMKYLADMNYVHRALAA---------RNILVNSNLVCKVSDFGLSRFLEDDT 163
Query: 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
S+PT +S+ G + I +TA + + ++ D ++YGI++ E+++
Sbjct: 164 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I+ + LDY+ H C ++
Sbjct: 72 VMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF A+ + + + G + I +
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKEYHAEGGKVPIKWM 188
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 11 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 69
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I+ + LDY+ H
Sbjct: 70 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF A+ + + + G
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKEYHAEGG 186
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I+ + LDY+ H C ++
Sbjct: 70 VMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF A+ + + + G + I +
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKEYHAEGGKVPIKWM 186
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 54/197 (27%)
Query: 80 IGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
+G G F V ++G +D VAIK++ + + F+ E K + N+ H LV+
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 136 SIAI--------------------------------------DVASALDYLHHHCQELIL 157
+ DV A++YL + L
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217
H D N L+++ + DF L+R+ V + +SS G + + ++ + + S+ S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 218 TNGDAYNYGILLLEMVT 234
+ D + +G+L+ E+ +
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 49/205 (23%)
Query: 76 LINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNL 131
L+ +G G F V ++G +D+ AV IK S+ + F E + + + H L
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDV--AVKMIKEGSM----SEDEFFQEAQTMMKLSHPKL 65
Query: 132 VRFISIA------------IDVASALDYLHHHCQEL-----------------------I 156
V+F + I L+YL H + L
Sbjct: 66 VKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D N L+D DL + DF + R+ V + SS G + + ++A + +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRY---VLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 217 STNGDAYNYGILLLEMVTRRK-PID 240
S+ D + +GIL+ E+ + K P D
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 53/229 (23%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS 115
P ++ E LK + +G G+F +V Y + D VVA+K L + +
Sbjct: 5 PTQFEERHLK------FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 58
Query: 116 FMAECKALKNICHRNLVRFISIA--------------IDVASALDYLHHHCQEL------ 155
F E + LK++ H N+V++ + + S DYL H + +
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 118
Query: 156 -----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+H + N+L++N+ IGDF L + + + G
Sbjct: 119 QYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-----RRKPIDFM 242
I + A + S+ S D +++G++L E+ T + P +FM
Sbjct: 179 -ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 226
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANAF 192
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
Query: 254 RMAFPN 259
FP
Sbjct: 253 EKFFPK 258
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 40/216 (18%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKV-LSIQCQGASKSFMAECKALKNICHRNLVRFISI- 137
IG G++ VY+ + K+ L + +G + + E LK + H N+V+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 138 --------------------------AIDVASALDYLHH------HCQEL-ILHCDPKPS 164
++ +A +L +C + +LH D KP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAY 223
N+L++ + I DF LAR P + ++ V T+ Y A D +GS + ST D +
Sbjct: 130 NLLINREGELKIADFGLAR---AFGIPVRKYTHEV-VTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 224 NYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN 259
+ G + EMV + E D + F + PN
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 49/213 (23%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---------SIQCQGASK---S 115
LK D F L ++G GSF V+ F AIK L ++C K S
Sbjct: 15 LKIED-FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 116 FMAECKALKNI----------------------------CHR-NLVRFISIAIDVASALD 146
E L ++ CH+ +L R A ++ L
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 147 YLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
+LH I++ D K N+LLD D I DF + + + + +N T Y
Sbjct: 134 FLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNEFCGTPDYI 186
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
A + LG + + + D +++G+LL EM+ + P
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 40/216 (18%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKV-LSIQCQGASKSFMAECKALKNICHRNLVRFISI- 137
IG G++ VY+ + K+ L + +G + + E LK + H N+V+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 138 --------------------------AIDVASALDYLHH------HCQEL-ILHCDPKPS 164
++ +A +L +C + +LH D KP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAY 223
N+L++ + I DF LAR P + ++ V T+ Y A D +GS + ST D +
Sbjct: 130 NLLINREGELKIADFGLAR---AFGIPVRKYTHEV-VTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 224 NYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN 259
+ G + EMV + E D + F + PN
Sbjct: 186 SVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPN 221
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 117 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 171
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 231
Query: 254 RMAFPN 259
FP
Sbjct: 232 EKFFPK 237
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 116 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 170
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 230
Query: 254 RMAFPN 259
FP
Sbjct: 231 EKFFPK 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 118 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 172
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 232
Query: 254 RMAFPN 259
FP
Sbjct: 233 EKFFPK 238
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANSF 195
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 255
Query: 254 RMAFPN 259
FP
Sbjct: 256 EKFFPK 261
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 115 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 169
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 229
Query: 254 RMAFPN 259
FP
Sbjct: 230 EKFFPK 235
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 54/200 (27%)
Query: 80 IGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
+G G F V ++G +D VAIK++ + + F+ E K + N+ H LV+
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 136 SIAI--------------------------------------DVASALDYLHHHCQELIL 157
+ DV A++YL + L
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217
H D N L+++ + DF L+R+ V + +SS G + + ++ + + S+ S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 218 TNGDAYNYGILLLEMVTRRK 237
+ D + +G+L+ E+ + K
Sbjct: 185 SKSDIWAFGVLMWEIYSLGK 204
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 54/200 (27%)
Query: 80 IGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
+G G F V ++G +D VAIK++ + + F+ E K + N+ H LV+
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 136 SIAI--------------------------------------DVASALDYLHHHCQELIL 157
+ DV A++YL + L
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 126
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217
H D N L+++ + DF L+R+ V + +SS G + + ++ + + S+ S
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 218 TNGDAYNYGILLLEMVTRRK 237
+ D + +G+L+ E+ + K
Sbjct: 184 SKSDIWAFGVLMWEIYSLGK 203
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 54/197 (27%)
Query: 80 IGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
+G G F V ++G +D VAIK++ + + F+ E K + N+ H LV+
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 136 SIAI--------------------------------------DVASALDYLHHHCQELIL 157
+ DV A++YL + L
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 122
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217
H D N L+++ + DF L+R+ V + +SS G + + ++ + + S+ S
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 218 TNGDAYNYGILLLEMVT 234
+ D + +G+L+ E+ +
Sbjct: 180 SKSDIWAFGVLMWEIYS 196
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 54/200 (27%)
Query: 80 IGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
+G G F V ++G +D VAIK++ + + F+ E K + N+ H LV+
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 136 SIAI--------------------------------------DVASALDYLHHHCQELIL 157
+ DV A++YL + L
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217
H D N L+++ + DF L+R+ V + +SS G + + ++ + + S+ S
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 218 TNGDAYNYGILLLEMVTRRK 237
+ D + +G+L+ E+ + K
Sbjct: 200 SKSDIWAFGVLMWEIYSLGK 219
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANSF 191
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
Query: 254 RMAFPN 259
FP
Sbjct: 252 EKFFPK 257
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 82/216 (37%), Gaps = 40/216 (18%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKV-LSIQCQGASKSFMAECKALKNICHRNLVRFISIA 138
IG G++ VY+ + K+ L + +G + + E LK + H N+V+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 139 IDVASALDYLHHHCQEL----------------------------------ILHCDPKPS 164
+ H Q+L +LH D KP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAY 223
N+L++ + I DF LAR P + ++ + T+ Y A D +GS + ST D +
Sbjct: 130 NLLINREGELKIADFGLAR---AFGIPVRKYTHEI-VTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 224 NYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN 259
+ G + EMV + E D + F + PN
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 8 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 66
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I + LDY+ H
Sbjct: 67 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 125
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF A+ + + + G
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKEYHAEGG 183
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 194
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
Query: 254 RMAFPN 259
FP
Sbjct: 255 EKFFPK 260
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 54/200 (27%)
Query: 80 IGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI 135
+G G F V ++G +D VAIK++ + + F+ E K + N+ H LV+
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 136 SIAI--------------------------------------DVASALDYLHHHCQELIL 157
+ DV A++YL + L
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 133
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217
H D N L+++ + DF L+R+ V + +SS G + + ++ + + S+ S
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 218 TNGDAYNYGILLLEMVTRRK 237
+ D + +G+L+ E+ + K
Sbjct: 191 SKSDIWAFGVLMWEIYSLGK 210
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 45/215 (20%)
Query: 67 LLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASKSFMAE-- 119
+LK T+ F I ++G G+F VY+G++ + + VAIK L A+K + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 120 ----------CKALKNICHRNLVRFISIAIDVASALDYLHHH------------CQEL-- 155
C+ L IC + V+ I + LDY+ H C ++
Sbjct: 72 VMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 156 ---------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
++H D NVL+ I DF A+ + + + G + I +
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKEYHAEGGKVPIKWM 188
Query: 207 ALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
AL+ L + D ++YG+ + E++T KP D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 127 CHR-NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR 185
CH+ +L R A ++ L +LH + I++ D K N+LLD D I DF + +
Sbjct: 112 CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-- 166
Query: 186 QEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ + +N T Y A + LG + + + D +++G+LL EM+ + P
Sbjct: 167 --ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 45/222 (20%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVL-SIQCQGASK 114
P + +LK T+ F I ++G G+F VY+G++ + + VAIK L A+K
Sbjct: 6 PNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 64
Query: 115 SFMAE------------CKALKNICHRNLVRFISIAIDVASALDYLHHH----------- 151
+ E C+ L IC + V+ I + LDY+ H
Sbjct: 65 EILDEAYVMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 152 -CQEL-----------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
C ++ ++H D NVL+ I DF A+ + + + G
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKEYHAEGG 181
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPID 240
+ I + AL+ L + D ++YG+ + E++T KP D
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 195
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 255
Query: 254 RMAFPN 259
FP
Sbjct: 256 EKFFPK 261
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 192
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
Query: 254 RMAFPN 259
FP
Sbjct: 253 EKFFPK 258
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 176
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 236
Query: 254 RMAFPN 259
FP
Sbjct: 237 EKFFPK 242
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 192
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
Query: 254 RMAFPN 259
FP
Sbjct: 253 EKFFPK 258
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 194
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
Query: 254 RMAFPN 259
FP
Sbjct: 255 EKFFPK 260
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 192
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
Query: 254 RMAFPN 259
FP
Sbjct: 253 EKFFPK 258
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 194
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
Query: 254 RMAFPN 259
FP
Sbjct: 255 EKFFPK 260
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 145 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 199
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 259
Query: 254 RMAFPN 259
FP
Sbjct: 260 EKFFPK 265
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 194
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
T Y + + + D + G ++ ++V P
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 191
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID-----FMFEGDLNL-HNFA 253
T Y + + + D + G ++ ++V P +F+ + L ++F
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
Query: 254 RMAFPN 259
FP
Sbjct: 252 EKFFPK 257
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 77/220 (35%), Gaps = 62/220 (28%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC 127
L D + +I +G G+F VY+ + A KV+ + + + +M E L +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 128 HRNLVRFISI-----------------AIDVA---------------------SALDYLH 149
H N+V+ + A+D AL+YLH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ I+H D K N+L D GD +LA F N + ++R +
Sbjct: 153 DNK---IIHRDLKAGNILFTLD-----GDIKLADFGVSAKN-----TRTIQRRDSFIGTP 199
Query: 210 YDLGSEV-----------STNGDAYNYGILLLEMVTRRKP 238
Y + EV D ++ GI L+EM P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 194
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
T Y + + + D + G ++ ++V P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 77/220 (35%), Gaps = 62/220 (28%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC 127
L D + +I +G G+F VY+ + A KV+ + + + +M E L +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 128 HRNLVRFISI-----------------AIDVA---------------------SALDYLH 149
H N+V+ + A+D AL+YLH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ I+H D K N+L D GD +LA F N + ++R +
Sbjct: 153 DNK---IIHRDLKAGNILFTLD-----GDIKLADFGVSAKN-----TRXIQRRDSFIGTP 199
Query: 210 YDLGSEV-----------STNGDAYNYGILLLEMVTRRKP 238
Y + EV D ++ GI L+EM P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SAL+YLH I+H D KP N+LL+ D+ I DF A+ S Q+ +N
Sbjct: 143 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXF 197
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
T Y + + + D + G ++ ++V P
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 77/220 (35%), Gaps = 62/220 (28%)
Query: 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC 127
L D + +I +G G+F VY+ + A KV+ + + + +M E L +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 128 HRNLVRFISI-----------------AIDVA---------------------SALDYLH 149
H N+V+ + A+D AL+YLH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ I+H D K N+L D GD +LA F N + ++R +
Sbjct: 153 DNK---IIHRDLKAGNILFTLD-----GDIKLADFGVSAKN-----TRXIQRRDXFIGTP 199
Query: 210 YDLGSEV-----------STNGDAYNYGILLLEMVTRRKP 238
Y + EV D ++ GI L+EM P
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 80/220 (36%), Gaps = 61/220 (27%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRN 130
D + L +IG G+ V + VAIK ++++ CQ + + E +A+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 131 LVRF---------------------------------------------ISIAIDVASAL 145
+V + +I +V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 146 DYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGY 205
+YLH + Q +H D K N+LL D I DF ++ F + T+ N VR+T +
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR---NKVRKT--F 186
Query: 206 TALDYDLGSEVSTN-------GDAYNYGILLLEMVTRRKP 238
+ EV D +++GI +E+ T P
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ-SSSNG 198
++ ALDYL + + I+H D KP N+LLD HI DF +A + TQ ++ G
Sbjct: 123 ELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAM---LPRETQITTMAG 176
Query: 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
+ + G+ S D ++ G+ E++ R+P
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 80/220 (36%), Gaps = 61/220 (27%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRN 130
D + L +IG G+ V + VAIK ++++ CQ + + E +A+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 131 LVRF---------------------------------------------ISIAIDVASAL 145
+V + +I +V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 146 DYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGY 205
+YLH + Q +H D K N+LL D I DF ++ F + T+ N VR+T +
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR---NKVRKT--F 181
Query: 206 TALDYDLGSEVSTN-------GDAYNYGILLLEMVTRRKP 238
+ EV D +++GI +E+ T P
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ SA++Y H H I+H D KP N+LLD L I DF L+ + N ++
Sbjct: 112 IISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--------MTDGNFLK 160
Query: 201 RTIG---YTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPID 240
+ G Y A + G D ++ G++L M+ RR P D
Sbjct: 161 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ SA++Y H H I+H D KP N+LLD L I DF L+ + N ++
Sbjct: 122 IISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--------MTDGNFLK 170
Query: 201 RTIG---YTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPID 240
+ G Y A + G D ++ G++L M+ RR P D
Sbjct: 171 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ SA++Y H H I+H D KP N+LLD L I DF L+ + N ++
Sbjct: 121 IISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--------MTDGNFLK 169
Query: 201 RTIG---YTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPID 240
+ G Y A + G D ++ G++L M+ RR P D
Sbjct: 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 110 QGASKSFM-AECKALKNICHRNLVRFISIAIDVASALDYLHHHCQEL-------ILHCDP 161
+G+ F+ A + +CH IA +A L YLH L I H D
Sbjct: 106 KGSLSDFLKANVVSWNELCH--------IAETMARGLAYLHEDIPGLKDGHKPAISHRDI 157
Query: 162 KPSNVLLDNDLFAHIGDFELA-RFRQEVSNPTQSSSNGVRRTIGYTALD--YDLGSEVST 218
K NVLL N+L A I DF LA +F S G RR + L+ + +
Sbjct: 158 KSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFL 217
Query: 219 NGDAYNYGILLLEMVTR----RKPID-FM--FEGDLNLH 250
D Y G++L E+ +R P+D +M FE ++ H
Sbjct: 218 RIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 135 ISIAIDVASALDYLHHHCQ----------ELILHCDPKPSNVLLDNDLFAHIGDFELARF 184
+IA AS D LH Q + +H D NVLL N A IGDF LAR
Sbjct: 154 FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR- 212
Query: 185 RQEVSNPTQSSSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++ N + G R + + A + + D ++YGILL E+ +
Sbjct: 213 --DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLV--- 132
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 133 -----------RFISIAIDVASALDYLHHHCQEL-----------------------ILH 158
+ + I D+ Y CQ L +LH
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 50/217 (23%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIK---VLSIQCQGASKSFMAECKALKNICHRNLVRF-- 134
IG G F VY+ L+ VA+K + + A + E LK + H N++++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 135 -------ISIAIDVASALD----------------------YLHHHCQEL-------ILH 158
++I +++A A D Y C L ++H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMH 159
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVST 218
D KP+NV + +GD L RF S+ T ++++ + T Y + + + +
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRF---FSSKT-TAAHSLVGTPYYMSPERIHENGYNF 215
Query: 219 NGDAYNYGILLLEMVTRRKPIDFMFEGD-LNLHNFAR 254
D ++ G LL EM + P F GD +NL++ +
Sbjct: 216 KSDIWSLGCLLYEMAALQSP----FYGDKMNLYSLCK 248
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ SA++Y H H I+H D KP N+LLD L I DF L+ + N ++
Sbjct: 116 IISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--------MTDGNFLK 164
Query: 201 RTIG---YTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPID 240
+ G Y A + G D ++ G++L M+ RR P D
Sbjct: 165 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 95/258 (36%), Gaps = 64/258 (24%)
Query: 46 PSKQPLRLTLRNAIPKEYYESLLKAT-----DGFPLINLIGVGSFDAVYQGVFDLNRAVV 100
PS+ + + P+EY++ D + L+ +G G + V++ + N V
Sbjct: 6 PSRARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKV 65
Query: 101 AIKVLSIQCQGASKSFMAECKALKNI-CHRNLVRFISIAIDVAS---------------- 143
+K+L + K E K L+N+ N++ I D S
Sbjct: 66 VVKILKPVKKNKIKR---EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFK 122
Query: 144 --------------------ALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELA 182
ALDY H I+H D KP NV++D++ + D+ LA
Sbjct: 123 QLYQTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 183 RFR---QEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
F QE + S G + Y DY L D ++ G +L M+ R++P
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
Query: 239 IDFMFEGDLNLHNFARMA 256
F G N R+A
Sbjct: 232 ---FFHGHDNYDQLVRIA 246
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 73/198 (36%), Gaps = 41/198 (20%)
Query: 77 INLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS-FMAECKALKNICHRNL 131
I +G G F V Y D +VA+K L C +S + E + L+ + H ++
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 132 VRFISIAID--------------VASALDYLHHHCQEL---------------------I 156
V++ D + S DYL HC L
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 133
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H NVLLDND IGDF LA+ E + +G Y A + +
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKF 192
Query: 217 STNGDAYNYGILLLEMVT 234
D +++G+ L E++T
Sbjct: 193 YYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 73/198 (36%), Gaps = 41/198 (20%)
Query: 77 INLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS-FMAECKALKNICHRNL 131
I +G G F V Y D +VA+K L C +S + E + L+ + H ++
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 132 VRFISIAID--------------VASALDYLHHHCQEL---------------------I 156
V++ D + S DYL HC L
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 132
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H NVLLDND IGDF LA+ E + +G Y A + +
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKF 191
Query: 217 STNGDAYNYGILLLEMVT 234
D +++G+ L E++T
Sbjct: 192 YYASDVWSFGVTLYELLT 209
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 124 KNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
+ + R+L+ F S VA + +L + +H D NVLL N A IGDF LAR
Sbjct: 161 EQLSSRDLLHFSS---QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
Query: 184 FRQEVSNPTQSSSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++ N + G R + + A + + D ++YGILL E+ +
Sbjct: 215 ---DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 129 RNLVRFISIAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187
R+L+ F S VA + +L +C +H D NVLL N A IGDF LAR +
Sbjct: 152 RDLLHFSS---QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR---D 201
Query: 188 VSNPTQSSSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+ N + G R + + A + + D ++YGILL E+ +
Sbjct: 202 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 137 IAIDVASALDYLHHHC--------QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188
+A ++ L YLH + I H D K NVLL +DL A + DF LA R E
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA-VRFEP 175
Query: 189 SNPTQSSSN--GVRRTIGYTALD--YDLGSEVSTNGDAYNYGILLLEMVTRRK----PID 240
P + G RR + L+ + + D Y G++L E+V+R K P+D
Sbjct: 176 GKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
Query: 241 ---FMFEGDLNLH 250
FE ++ H
Sbjct: 236 EYMLPFEEEIGQH 248
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 129 RNLVRFISIAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187
R+L+ F S VA + +L +C +H D NVLL N A IGDF LAR +
Sbjct: 164 RDLLHFSS---QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR---D 213
Query: 188 VSNPTQSSSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+ N + G R + + A + + D ++YGILL E+ +
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 138 AIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197
A +V AL+YLH + I++ D KP N+LLD + I DF A++ +V+ + +
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD 168
Query: 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
Y A + + + D +++GIL+ EM+ P
Sbjct: 169 -------YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 129 RNLVRFISIAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187
R+L+ F S VA + +L +C +H D NVLL N A IGDF LAR +
Sbjct: 160 RDLLHFSS---QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR---D 209
Query: 188 VSNPTQSSSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+ N + G R + + A + + D ++YGILL E+ +
Sbjct: 210 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
RF S I +A L+YLH I++ D K NVLLD++ + D+ + + E P
Sbjct: 156 RFYSAEISLA--LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPG 207
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
++S T Y A + G + + D + G+L+ EM+ R P D + D
Sbjct: 208 DTTSTFCG-TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 129 RNLVRFISIAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187
R+L+ F S VA + +L +C +H D NVLL N A IGDF LAR +
Sbjct: 158 RDLLHFSS---QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR---D 207
Query: 188 VSNPTQSSSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+ N + G R + + A + + D ++YGILL E+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
RF S I +A L+YLH I++ D K NVLLD++ + D+ + + E P
Sbjct: 124 RFYSAEISLA--LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPG 175
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
++S T Y A + G + + D + G+L+ EM+ R P D + D
Sbjct: 176 DTTSXFCG-TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 43/149 (28%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL------SIQCQGASKSFMAECKALKNIC 127
+ L + +GVG+F V G L VA+K+L S+ G K + K ++
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 128 HRNLVRFISIAID----------------------------------VASALDYLHHHCQ 153
L + IS D + SA+DY H H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-- 130
Query: 154 ELILHCDPKPSNVLLDNDLFAHIGDFELA 182
+++H D KP NVLLD + A I DF L+
Sbjct: 131 -MVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ S +
Sbjct: 128 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 179
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y + + G+ S D ++ G+ L+EM R PI
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 43/149 (28%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLS---IQCQGASKSFMAECKALKNICHRN 130
+ L + +GVG+F V G L VA+K+L+ I+ E + LK H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 131 LVRF---ISIAID----------------------------------VASALDYLHHHCQ 153
+++ IS D + SA+DY H H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-- 130
Query: 154 ELILHCDPKPSNVLLDNDLFAHIGDFELA 182
+++H D KP NVLLD + A I DF L+
Sbjct: 131 -MVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 81/196 (41%), Gaps = 42/196 (21%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ---ISIAIDVASALDYLH----------HHCQELIL----------------------HC 159
++ + V +Y+ H Q ++ H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSEVST 218
D N+L++++L + DF LAR ++ +P + ++ G + I +T+ + + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLARVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 219 NGDAYNYGILLLEMVT 234
D ++YGI+L E+++
Sbjct: 230 ASDVWSYGIVLWEVMS 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++A ALD+LH I++ D KP N+LLD + + DF L+ ++ + + ++ S
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYS--F 186
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
T+ Y A + + + D +++G+L+ EM+T P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 43/147 (29%)
Query: 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLS---IQCQGASKSFMAECKALKNICHRNLV 132
L + +GVG+F V G +L VA+K+L+ I+ E + LK H +++
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 133 RF---ISIAIDV----------------------------------ASALDYLHHHCQEL 155
+ IS D+ S +DY H H +
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---M 136
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELA 182
++H D KP NVLLD + A I DF L+
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLS 163
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++A ALD+LH I++ D KP N+LLD + + DF L+ ++ + + ++ S
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYS--F 187
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
T+ Y A + + + D +++G+L+ EM+T P
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 23/133 (17%)
Query: 123 LKNICHRN--LVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLL------DNDLFA 174
+K HR L+ I+ + LDY+H C I+H D KP NVL+ +N +
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQI 177
Query: 175 HIGDFELA-RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMV 233
I D A + + +N Q+ Y + + LG+ D ++ L+ E++
Sbjct: 178 KIADLGNACWYDEHYTNSIQTRE--------YRSPEVLLGAPWGCGADIWSTACLIFELI 229
Query: 234 TRRKPIDFMFEGD 246
T DF+FE D
Sbjct: 230 TG----DFLFEPD 238
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 23/133 (17%)
Query: 123 LKNICHRN--LVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLL------DNDLFA 174
+K HR L+ I+ + LDY+H C I+H D KP NVL+ +N +
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQI 177
Query: 175 HIGDFELA-RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMV 233
I D A + + +N Q+ Y + + LG+ D ++ L+ E++
Sbjct: 178 KIADLGNACWYDEHYTNSIQTRE--------YRSPEVLLGAPWGCGADIWSTACLIFELI 229
Query: 234 TRRKPIDFMFEGD 246
T DF+FE D
Sbjct: 230 TG----DFLFEPD 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL Q I+H D KPSN+L+++ + DF ++ S +
Sbjct: 119 VSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 170
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y A + G+ S D ++ G+ L+E+ R PI
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L + + A + + YLH + +H D NVLLDND IGDF LA+ E
Sbjct: 132 GLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+ +G Y A + + D +++G+ L E++T
Sbjct: 189 EXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
RF S I +A L+YLH I++ D K NVLLD++ + D+ + + E P
Sbjct: 109 RFYSAEISLA--LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPG 160
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
++S T Y A + G + + D + G+L+ EM+ R P D + D
Sbjct: 161 DTTSXFCG-TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 213
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++A ALD+LH I++ D KP N+LLD + + DF L+ ++ + + ++ S
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYS--F 186
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
T+ Y A + + + D +++G+L+ EM+T P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++A LD+LH I++ D KP N+LLD + + DF L+ ++ + + ++ S
Sbjct: 138 ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS--KEAIDHEKKAYS--F 190
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
T+ Y A + S + D ++YG+L+ EM+T P
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ S +
Sbjct: 136 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 187
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y + + G+ S D ++ G+ L+EM R PI
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 152
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 134 FISIAIDVASALDYLH-HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
IS + VA +++L C +H D N+LL + I DF LAR NP
Sbjct: 201 LISYSFQVARGMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLAR--DIYKNPD 254
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
R + + A + ST D ++YG+LL E+ +
Sbjct: 255 YVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 133 RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192
RF S I +A L+YLH I++ D K NVLLD++ + D+ + + E P
Sbjct: 113 RFYSAEISLA--LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPG 164
Query: 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
++S T Y A + G + + D + G+L+ EM+ R P D + D
Sbjct: 165 DTTSXFCG-TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 145
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 29/148 (19%)
Query: 118 AECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HI 176
+ K L I +RF ++ ALDY H + I+H D KP NV++D+ +
Sbjct: 120 TDFKQLYQILTDFDIRFY--MYELLKALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRL 174
Query: 177 GDFELARFRQEVSNPTQSSS--------NGVRRTIGYTALDYDLGSEVSTNGDAYNYGIL 228
D+ LA F +P Q + G + Y DY L D ++ G +
Sbjct: 175 IDWGLAEF----YHPAQEYNVRVASRYFKGPELLVDYQMYDYSL--------DMWSLGCM 222
Query: 229 LLEMVTRRKPIDFMFEGDLNLHNFARMA 256
L M+ RR+P F G N R+A
Sbjct: 223 LASMIFRREPF---FHGQDNYDQLVRIA 247
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 29/148 (19%)
Query: 118 AECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HI 176
+ K L I +RF ++ ALDY H + I+H D KP NV++D+ +
Sbjct: 125 TDFKQLYQILTDFDIRFY--MYELLKALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRL 179
Query: 177 GDFELARFRQEVSNPTQSSS--------NGVRRTIGYTALDYDLGSEVSTNGDAYNYGIL 228
D+ LA F +P Q + G + Y DY L D ++ G +
Sbjct: 180 IDWGLAEF----YHPAQEYNVRVASRYFKGPELLVDYQMYDYSL--------DMWSLGCM 227
Query: 229 LLEMVTRRKPIDFMFEGDLNLHNFARMA 256
L M+ RR+P F G N R+A
Sbjct: 228 LASMIFRREPF---FHGQDNYDQLVRIA 252
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 124 KNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
KN +++ + + +++ + YL +H D N+L++++L + DF L+R
Sbjct: 116 KNDGQFTVIQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 184 FRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++ +P + ++ G + I +TA + + ++ D ++YGI++ E+V+
Sbjct: 173 VLED--DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 145
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ A++Y H H I+H D KP N+LLD++L I DF L+ + N ++
Sbjct: 117 IICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNI--------MTDGNFLK 165
Query: 201 RTIG---YTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMF 243
+ G Y A + G D ++ GI+L M+ R P D F
Sbjct: 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 53/213 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
D F ++ +G G F VY N+ ++A+KVL ++ +G E + ++
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 127 CHRNLVRF---------ISIAIDVA-------------------------SALDYLHHHC 152
H N++R I + ++ A D LH+
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 153 QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR-----TIGYTA 207
+ ++H D KP N+L+ + G+ ++A F V P+ +RR T+ Y
Sbjct: 132 ERKVIHRDIKPENLLM-----GYKGELKIADFGWSVHAPS------LRRRXMCGTLDYLP 180
Query: 208 LDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
+ G D + G+L E + P D
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 44/202 (21%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSI------------------QCQGA--S 113
F ++ IG GSF VY+G+ + + VVAIK++ + QC +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 114 KSFMAECKALK-NICHRNL----------------VRFISIAIDVASALDYLHHHCQELI 156
+ F + K+ K I L +I ++ LDYLH E
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLH---SERK 137
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D K +NVLL + DF +A ++++ TQ N T + A + S
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 217 STNGDAYNYGILLLEMVTRRKP 238
D ++ GI +E+ P
Sbjct: 194 DFKADIWSLGITAIELAKGEPP 215
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 152
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 34 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 153
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 210 GYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 25 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 144
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 201 GYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAIK +S + Q + + E K L H N++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ S +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 160
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y + + G+ S D ++ G+ L+EM R PI
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ S +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 160
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y + + G+ S D ++ G+ L+EM R PI
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 86/248 (34%), Gaps = 71/248 (28%)
Query: 74 FPLINLIGVGSFDAVYQG---VFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRN 130
F I +G G F V++ V D N A+ I++ + + A + M E KAL + H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL--AREKVMREVKALAKLEHPG 64
Query: 131 LVRF----------------------------------------------------ISIA 138
+VR+ + I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 139 IDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE--------VSN 190
+ +A A+++LH ++H D KPSN+ D +GDF L +
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLH 250
P + G T Y + + G+ S D ++ G++L E++ P E L
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238
Query: 251 NFARMAFP 258
+ + FP
Sbjct: 239 DVRNLKFP 246
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 41/198 (20%)
Query: 77 INLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS-FMAECKALKNICHRNL 131
I +G G F V Y D +VA+K L C +S + E L+ + H ++
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 132 VRFISIAID--------------VASALDYLHHH--------------CQEL-------I 156
+++ D + S DYL H C+ +
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H + NVLLDND IGDF LA+ E + +G Y A + +
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKF 197
Query: 217 STNGDAYNYGILLLEMVT 234
D +++G+ L E++T
Sbjct: 198 YYASDVWSFGVTLYELLT 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 38/192 (19%)
Query: 80 IGVGSFDAVYQGVFDLNRAV--VAIKVLSIQCQGA-SKSFMAECKALKNICHRNLVRFIS 136
+G G+F +V QGV+ + + VAIKVL + A ++ M E + + + + +VR I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 137 IA---------------------------IDVASALDYLHHHCQEL-------ILHCDPK 162
+ I V++ + LH + +H D
Sbjct: 78 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLA 137
Query: 163 PSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDA 222
NVLL N +A I DF L++ + + S G + + + A + + S+ D
Sbjct: 138 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINFRKFSSRSDV 196
Query: 223 YNYGILLLEMVT 234
++YG+ + E ++
Sbjct: 197 WSYGVTMWEALS 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF--------ELARFRQE 187
++ + V AL YLH+ ++H D K ++LL +D + DF E+ + +
Sbjct: 145 TVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL 201
Query: 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDL 247
V P + + R L Y G+EV D ++ GI+++EM+ P + E L
Sbjct: 202 VGTPYWMAPEVISR------LPY--GTEV----DIWSLGIMVIEMIDGEPP--YFNEPPL 247
Query: 248 NLHNFARMAFPNRVMDI 264
R + P RV D+
Sbjct: 248 QAMRRIRDSLPPRVKDL 264
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---F 168
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
IA+ + AL++LH ++H D KPSNVL++ + DF ++ + V + ++
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTID 213
Query: 197 NGVRRTIGYTALDYDLGSE-VSTNGDAYNYGILLLEMVTRRKPID 240
G + + ++ +L + S D ++ GI ++E+ R P D
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ S +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 160
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y + + G+ S D ++ G+ L+EM R PI
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 41/198 (20%)
Query: 77 INLIGVGSFDAV----YQGVFDLNRAVVAIKVLSIQCQGASKS-FMAECKALKNICHRNL 131
I +G G F V Y D +VA+K L C +S + E L+ + H ++
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 132 VRFISIAID--------------VASALDYLHHH--------------CQEL-------I 156
+++ D + S DYL H C+ +
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H + NVLLDND IGDF LA+ E + +G Y A + +
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKF 197
Query: 217 STNGDAYNYGILLLEMVT 234
D +++G+ L E++T
Sbjct: 198 YYASDVWSFGVTLYELLT 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE------- 187
+ I I +A A+++LH ++H D KPSN+ D +GDF L +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 188 -VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMV 233
P ++ G T Y + + G+ S D ++ G++L E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 74 FPLINLIGVGSFDAVYQG---VFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRN 130
F I +G G F V++ V D N A+ I++ + + A + M E KAL + H
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL--AREKVMREVKALAKLEHPG 65
Query: 131 LVRFISIAIDVA 142
+VR+ + ++
Sbjct: 66 IVRYFNAWLETP 77
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ S +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 160
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y + + G+ S D ++ G+ L+EM R PI
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGA--- 168
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ S +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 160
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y + + G+ S D ++ G+ L+EM R PI
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 54/203 (26%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSF---MAECKALKNICHRNLVRF-- 134
IG GSF AVY N VVAIK +S + +++ + + E + L+ + H N +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 135 --------------------------------ISIAIDVASALD---YLHHHCQELILHC 159
+ IA AL YLH H ++H
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHR 178
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVST 218
D K N+LL +GDF S + +N T + A + L E
Sbjct: 179 DVKAGNILLSEPGLVKLGDFG--------SASIMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 219 NG--DAYNYGILLLEMVTRRKPI 239
+G D ++ GI +E+ R+ P+
Sbjct: 231 DGKVDVWSLGITCIELAERKPPL 253
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ S +
Sbjct: 171 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDSMA 222
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
N T Y + + G+ S D ++ G+ L+EM R PI
Sbjct: 223 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + + +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DXXK 207
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 208 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 54/203 (26%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSF---MAECKALKNICHRNLVRF-- 134
IG GSF AVY N VVAIK +S + +++ + + E + L+ + H N +++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 135 --------------------------------ISIAIDVASALD---YLHHHCQELILHC 159
+ IA AL YLH H ++H
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHR 139
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVST 218
D K N+LL +GDF S + +N T + A + L E
Sbjct: 140 DVKAGNILLSEPGLVKLGDFG--------SASIMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 219 NG--DAYNYGILLLEMVTRRKPI 239
+G D ++ GI +E+ R+ P+
Sbjct: 192 DGKVDVWSLGITCIELAERKPPL 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 43/200 (21%)
Query: 76 LINLIGVGSFDAVYQGVFD------LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR 129
L+ +G GSF V +G +D ++ AV +K + A F+ E A+ ++ HR
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 130 NLVRFISIAI-----------DVASALDYLHHHCQELIL--------------------- 157
NL+R + + + S LD L H +L
Sbjct: 82 NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 158 --HCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D N+LL IGDF L R Q + V + A +
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWCAPESLKTR 199
Query: 215 EVSTNGDAYNYGILLLEMVT 234
S D + +G+ L EM T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 78/225 (34%), Gaps = 62/225 (27%)
Query: 64 YESLLKATDGFPLINLIG-VGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKA 122
YE + + + +IG +G F VY+ + A KV+ + + + +M E
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 123 LKNICHRNLVRFISI-----------------AIDVA---------------------SA 144
L + H N+V+ + A+D A
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 120
Query: 145 LDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG 204
L+YLH + I+H D K N+L D GD +LA F N + ++R
Sbjct: 121 LNYLHDN---KIIHRDLKAGNILFTLD-----GDIKLADFGVSAKN----TRTXIQRRDS 168
Query: 205 YTALDYDLGSEV-----------STNGDAYNYGILLLEMVTRRKP 238
+ Y + EV D ++ GI L+EM P
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 42/196 (21%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 135 ---ISIAIDVASALDYLH----------HHCQELIL----------------------HC 159
++ + V +Y+ H Q ++ H
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 169
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSEVST 218
D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + + ++
Sbjct: 170 DLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 227
Query: 219 NGDAYNYGILLLEMVT 234
D ++YGI+L E+++
Sbjct: 228 ASDVWSYGIVLWEVMS 243
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--- 156
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + +
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 215 FTSASDVWSYGIVLWEVMS 233
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 80/196 (40%), Gaps = 42/196 (21%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ------------ISIAIDVASALDYLHHHCQELIL-----------------------HC 159
++ ++ S +L H + + H
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSEVST 218
D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 219 NGDAYNYGILLLEMVT 234
D ++YGI+L E+++
Sbjct: 230 ASDVWSYGIVLWEVMS 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 43/200 (21%)
Query: 76 LINLIGVGSFDAVYQGVFD------LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR 129
L+ +G GSF V +G +D ++ AV +K + A F+ E A+ ++ HR
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 130 NLVRFISIAID-----------VASALDYLHHHCQELIL--------------------- 157
NL+R + + + S LD L H +L
Sbjct: 72 NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 158 --HCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D N+LL IGDF L R Q + V + A +
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWCAPESLKTR 189
Query: 215 EVSTNGDAYNYGILLLEMVT 234
S D + +G+ L EM T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 42/196 (21%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ---ISIAIDVASALDYLH----------HHCQELIL----------------------HC 159
++ + V +Y+ H Q ++ H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSEVST 218
D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + + ++
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 219 NGDAYNYGILLLEMVT 234
D ++YGI+L E+++
Sbjct: 230 ASDVWSYGIVLWEVMS 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 49/218 (22%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNIC 127
+ D + I +G G++ VY+ + + VAIK + ++ +G + + E LK +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 128 HRNLVRFISIAI--------------DVASALD--------YLHHHCQELI--------- 156
HRN++ S+ D+ +D + +LI
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 157 --LHCDPKPSNVLL-----DNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
LH D KP N+LL IGDF LAR P + ++ + T+ Y +
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR---AFGIPIRQFTHEI-ITLWYRPPE 207
Query: 210 YDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
LGS ST+ D ++ + EM+ + +F GD
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEMLMKTP----LFPGD 241
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--- 139
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + +
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 198 FTSASDVWSYGIVLWEVMS 216
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--- 139
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + +
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 198 FTSASDVWSYGIVLWEVMS 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---Y 168
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---Y 168
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 62 EYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECK 121
++Y +L + D + + L+ SFD Y+ V+ + V+ ++L
Sbjct: 85 QFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILG--------------- 128
Query: 122 ALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFEL 181
I + AL++L + + I+H D KPSN+LLD + DF +
Sbjct: 129 --------------KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGI 172
Query: 182 ARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE-VSTNGDAYNYGILLLEMVTRRKP 238
+ Q V + ++ G R + +D + D ++ GI L E+ T R P
Sbjct: 173 S--GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---Y 168
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L+R ++ +P + ++ G + I +T+ + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 131 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRXXLXGTLDYLPPE 181
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 77/199 (38%), Gaps = 48/199 (24%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
++G G F V G L VAIK L + + + F+ E + H N++R
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 135 ISIAID--------------------------------------VASALDYLHHHCQELI 156
+ +AS + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---Y 168
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSE 215
+H D N+L++++L + DF L R ++ +P + ++ G + I +T+ + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLED--DPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 216 VSTNGDAYNYGILLLEMVT 234
++ D ++YGI+L E+++
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
IA+ + AL++LH ++H D KPSNVL++ + DF ++ + V + +
Sbjct: 114 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDID 169
Query: 197 NGVRRTIGYTALDYDLGSE-VSTNGDAYNYGILLLEMVTRRKPID 240
G + + ++ +L + S D ++ GI ++E+ R P D
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 78/219 (35%), Gaps = 49/219 (22%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIK--VLSIQCQGASKSFMAECKALKNICHRNLVRFISI 137
IG G+F V++ VA+K ++ + +G + + E K L+ + H N+V I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 138 AIDVAS-----------ALDYLHHHCQEL------------------------------- 155
AS D+ H L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS- 214
ILH D K +NVL+ D + DF LAR N + T+ Y + LG
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFA 253
+ D + G ++ EM T R PI +G+ H A
Sbjct: 206 DYGPPIDLWGAGCIMAEMWT-RSPI---MQGNTEQHQLA 240
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 124 KNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
KN +++ + + + S + YL +H D N+L++++L + DF ++R
Sbjct: 123 KNDGRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 184 FRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++ +P + ++ G + I +TA + + ++ D ++YGI++ E+++
Sbjct: 180 VLED--DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 167
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 79 LIGVGSFDAVYQGVFDLNRAV---VAIKVLSIQCQGASKS-FMAECKALKNICHRNLVRF 134
++G G F VY+GV+ ++ VA+K C +K FM+E +KN+ H ++V+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I I ++ V + + Y C+ + +H D
Sbjct: 91 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 150
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N+L+ + +GDF L+R+ + + ++ R I + + + +T
Sbjct: 151 IAVRNILVASPECVKLGDFGLSRY---IEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 207
Query: 221 DAYNYGILLLEMVTRRKPIDFMFE 244
D + + + + E+++ K F E
Sbjct: 208 DVWMFAVCMWEILSFGKQPFFWLE 231
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 79 LIGVGSFDAVYQGVFDLNRAV---VAIKVLSIQCQGASKS-FMAECKALKNICHRNLVRF 134
++G G F VY+GV+ ++ VA+K C +K FM+E +KN+ H ++V+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I I ++ V + + Y C+ + +H D
Sbjct: 75 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 134
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N+L+ + +GDF L+R+ + + ++ R I + + + +T
Sbjct: 135 IAVRNILVASPECVKLGDFGLSRY---IEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 191
Query: 221 DAYNYGILLLEMVTRRKPIDFMFE 244
D + + + + E+++ K F E
Sbjct: 192 DVWMFAVCMWEILSFGKQPFFWLE 215
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR-------FRQEVSNPTQ 193
+ AL Y+H I+H D KP N+ +D IGDF LA+ + S
Sbjct: 125 ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 194 SSSNGVRRTIG---YTALDY-DLGSEVSTNGDAYNYGILLLEMV 233
SS+ + IG Y A + D + D Y+ GI+ EM+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR--------FRQEVSNPT 192
+ AL Y+H I+H D KP N+ +D IGDF LA+ + + N
Sbjct: 125 ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 193 QSSSNGVRRTIG---YTALDY-DLGSEVSTNGDAYNYGILLLEMV 233
SS N + IG Y A + D + D Y+ GI+ EM+
Sbjct: 182 GSSDN-LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V +LN+ VAI+ +S + Q + + E K L H N++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 131 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE 181
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 124 KNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
KN +++ + + + S + YL +H D N+L++++L + DF ++R
Sbjct: 108 KNDGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSR 164
Query: 184 FRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++ +P + ++ G + I +TA + + ++ D ++YGI++ E+++
Sbjct: 165 VLED--DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 79 LIGVGSFDAVYQGVFDLNRAV---VAIKVLSIQCQGASKS-FMAECKALKNICHRNLVRF 134
++G G F VY+GV+ ++ VA+K C +K FM+E +KN+ H ++V+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I I ++ V + + Y C+ + +H D
Sbjct: 79 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 138
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
N+L+ + +GDF L+R+ + + ++ R I + + + +T
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRY---IEDEDYYKASVTRLPIKWMSPESINFRRFTTAS 195
Query: 221 DAYNYGILLLEMVTRRKPIDFMFE 244
D + + + + E+++ K F E
Sbjct: 196 DVWMFAVCMWEILSFGKQPFFWLE 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 124 KNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
KN +++ + + + S + YL +H D N+L++++L + DF ++R
Sbjct: 102 KNDGRFTVIQLVGMLRGIGSGMKYLSDMSY---VHRDLAARNILVNSNLVCKVSDFGMSR 158
Query: 184 FRQEVSNPTQS-SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++ +P + ++ G + I +TA + + ++ D ++YGI++ E+++
Sbjct: 159 VLED--DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 40/195 (20%)
Query: 79 LIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF 134
+IG G F V G L VAIK L + + + F+ E + H N+V
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 135 ---------ISIAIDVA--SALD-YLHHHCQELIL-----------------------HC 159
+ I I+ ALD +L H + + H
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHR 169
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N+L++++L + DF L+R ++ +++ G + + +TA + + ++
Sbjct: 170 DLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG-KIPVRWTAPEAIQYRKFTSA 228
Query: 220 GDAYNYGILLLEMVT 234
D ++YGI++ E+++
Sbjct: 229 SDVWSYGIVMWEVMS 243
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 43/200 (21%)
Query: 76 LINLIGVGSFDAVYQGVFD------LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR 129
L+ +G GSF V +G +D ++ AV +K + A F+ E A+ ++ HR
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 130 NLVRFISIAID-----------VASALDYLHHHCQELIL--------------------- 157
NL+R + + + S LD L H +L
Sbjct: 72 NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 158 --HCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D N+LL IGDF L R Q + V + A +
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTR 189
Query: 215 EVSTNGDAYNYGILLLEMVT 234
S D + +G+ L EM T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + + T+ Y +
Sbjct: 152 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRDDLCGTLDYLPPE 202
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 143 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 188
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 189 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 243
Query: 259 NRVMD 263
+ V +
Sbjct: 244 DFVTE 248
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 78/219 (35%), Gaps = 49/219 (22%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIK--VLSIQCQGASKSFMAECKALKNICHRNLVRFISI 137
IG G+F V++ VA+K ++ + +G + + E K L+ + H N+V I I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 138 AIDVAS-----------ALDYLHHHCQEL------------------------------- 155
AS D+ H L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 144
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS- 214
ILH D K +NVL+ D + DF LAR N + T+ Y + LG
Sbjct: 145 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 204
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFA 253
+ D + G ++ EM T R PI +G+ H A
Sbjct: 205 DYGPPIDLWGAGCIMAEMWT-RSPI---MQGNTEQHQLA 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + +
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 192
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 193 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 152 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 197
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 198 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 252
Query: 259 NRVMD 263
+ V +
Sbjct: 253 DFVTE 257
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + + T+ Y +
Sbjct: 127 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRDTLCGTLDYLPPE 177
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 36 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 155
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 212 GYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 44/202 (21%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK-------SFMAECKA---- 122
F + IG GSF V++G+ + + VVAIK++ ++ + +++C +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 123 ------LKNICHRNLVRFI--------------------SIAIDVASALDYLHHHCQELI 156
LK+ ++ ++ +I ++ LDYLH E
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKK 140
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D K +NVLL + DF +A ++++ TQ N T + A + S
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 217 STNGDAYNYGILLLEMVTRRKP 238
+ D ++ GI +E+ P
Sbjct: 197 DSKADIWSLGITAIELARGEPP 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 43/200 (21%)
Query: 76 LINLIGVGSFDAVYQGVFD------LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR 129
L+ +G GSF V +G +D ++ AV +K + A F+ E A+ ++ HR
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 130 NLVRFISIAI-----------DVASALDYLHHHCQELIL--------------------- 157
NL+R + + + S LD L H +L
Sbjct: 82 NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141
Query: 158 --HCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D N+LL IGDF L R Q + V + A +
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTR 199
Query: 215 EVSTNGDAYNYGILLLEMVT 234
S D + +G+ L EM T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 44/202 (21%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK-------SFMAECKA---- 122
F + IG GSF V++G+ + + VVAIK++ ++ + +++C +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 123 ------LKNICHRNLVRFI--------------------SIAIDVASALDYLHHHCQELI 156
LK+ ++ ++ +I ++ LDYLH E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKK 125
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D K +NVLL + DF +A ++++ TQ N T + A + S
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 217 STNGDAYNYGILLLEMVTRRKP 238
+ D ++ GI +E+ P
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NVL+D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 47/189 (24%)
Query: 87 AVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI----- 139
A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 140 ----DVASALDYLHHH-CQEL---------------------------ILHCDPKPSNVL 167
DV ++ + + CQ + I+H D KPSN++
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ +D I DF LAR + T T Y A + LG N D ++ G
Sbjct: 159 VKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 228 LLLEMVTRR 236
++ EMV +
Sbjct: 214 IMGEMVRHK 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 167
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + +
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 196
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 197 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 207
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 208 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + +
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 200
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 201 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 43/200 (21%)
Query: 76 LINLIGVGSFDAVYQGVFD------LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR 129
L+ +G GSF V +G +D ++ AV +K + A F+ E A+ ++ HR
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 130 NLVRFISIAID-----------VASALDYLHHHCQELIL--------------------- 157
NL+R + + + S LD L H +L
Sbjct: 72 NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131
Query: 158 --HCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D N+LL IGDF L R Q + V + A +
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTR 189
Query: 215 EVSTNGDAYNYGILLLEMVT 234
S D + +G+ L EM T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 78/219 (35%), Gaps = 49/219 (22%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIK--VLSIQCQGASKSFMAECKALKNICHRNLVRFISI 137
IG G+F V++ VA+K ++ + +G + + E K L+ + H N+V I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 138 AIDVAS-----------ALDYLHHHCQEL------------------------------- 155
AS D+ H L
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS- 214
ILH D K +NVL+ D + DF LAR N + T+ Y + LG
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFA 253
+ D + G ++ EM T R PI +G+ H A
Sbjct: 206 DYGPPIDLWGAGCIMAEMWT-RSPI---MQGNTEQHQLA 240
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 44/202 (21%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK-------SFMAECKA---- 122
F + IG GSF V++G+ + + VVAIK++ ++ + +++C +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 123 ------LKNICHRNLVRFI--------------------SIAIDVASALDYLHHHCQELI 156
LK+ ++ ++ +I ++ LDYLH E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKK 125
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D K +NVLL + DF +A ++++ TQ N T + A + S
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 217 STNGDAYNYGILLLEMVTRRKP 238
+ D ++ GI +E+ P
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 43/200 (21%)
Query: 76 LINLIGVGSFDAVYQGVFD------LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR 129
L+ +G GSF V +G +D ++ AV +K + A F+ E A+ ++ HR
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 130 NLVRFISIAID-----------VASALDYLHHHCQELIL--------------------- 157
NL+R + + + S LD L H +L
Sbjct: 76 NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 158 --HCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D N+LL IGDF L R Q + V + A +
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTR 193
Query: 215 EVSTNGDAYNYGILLLEMVT 234
S D + +G+ L EM T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 44/202 (21%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSI------------------QCQGA--S 113
F + IG GSF V++G+ + + VVAIK++ + QC + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 114 KSFMAECKA---------LKNICHRNLVR--------FISIAIDVASALDYLHHHCQELI 156
K + + K L +L+R ++ ++ LDYLH E
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLH---SEKK 141
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D K +NVLL + DF +A ++++ TQ N T + A + S
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 217 STNGDAYNYGILLLEMVTRRKP 238
+ D ++ GI +E+ P
Sbjct: 198 DSKADIWSLGITAIELAKGEPP 219
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 78/219 (35%), Gaps = 49/219 (22%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIK--VLSIQCQGASKSFMAECKALKNICHRNLVRFISI 137
IG G+F V++ VA+K ++ + +G + + E K L+ + H N+V I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 138 AIDVAS-----------ALDYLHHHCQEL------------------------------- 155
AS D+ H L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS- 214
ILH D K +NVL+ D + DF LAR N + T+ Y + LG
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFA 253
+ D + G ++ EM T R PI +G+ H A
Sbjct: 206 DYGPPIDLWGAGCIMAEMWT-RSPI---MQGNTEQHQLA 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 207
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 208 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 207
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 208 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + +
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 199
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 200 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 43/200 (21%)
Query: 76 LINLIGVGSFDAVYQGVFD------LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR 129
L+ +G GSF V +G +D ++ AV +K + A F+ E A+ ++ HR
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 130 NLVRFISIAID-----------VASALDYLHHHCQELIL--------------------- 157
NL+R + + + S LD L H +L
Sbjct: 76 NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 135
Query: 158 --HCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D N+LL IGDF L R Q + V + A +
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLKTR 193
Query: 215 EVSTNGDAYNYGILLLEMVT 234
S D + +G+ L EM T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 131 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 176
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 177 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 231
Query: 259 NRVMD 263
+ V +
Sbjct: 232 DFVTE 236
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 131 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 176
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 177 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 231
Query: 259 NRVMD 263
+ V +
Sbjct: 232 DFVTE 236
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 45/213 (21%)
Query: 63 YYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK-------S 115
Y++S+ + F + IG GSF V++G+ + + VVAIK++ ++ +
Sbjct: 19 YFQSM-DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 77
Query: 116 FMAECKA----------LKNICHRNLVRFI--------------------SIAIDVASAL 145
+++C + LK+ ++ ++ +I ++ L
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGL 137
Query: 146 DYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGY 205
DYLH E +H D K +NVLL + DF +A + TQ N T +
Sbjct: 138 DYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNTFVGTPFW 190
Query: 206 TALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
A + S + D ++ GI +E+ P
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 129 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 174
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 175 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 229
Query: 259 NRVMD 263
+ V +
Sbjct: 230 DFVTE 234
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 46/206 (22%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQGAS-KSFMAECKALKNICHRNL 131
+ L+ IG G+F V L VA+K++ Q +S + E + +K + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 132 VRFISI---------AIDVASA---LDYLHHHC----------------------QELIL 157
V+ + ++ AS DYL H Q+ I+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELA---RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D K N+LLD D+ I DF + F ++ S + YD G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL--FQGKKYD-GP 192
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPID 240
EV D ++ G++L +V+ P D
Sbjct: 193 EV----DVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 46/206 (22%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQGAS-KSFMAECKALKNICHRNL 131
+ L+ IG G+F V L VA+K++ Q +S + E + +K + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 132 VRFISI---------AIDVASA---LDYLHHHC----------------------QELIL 157
V+ + ++ AS DYL H Q+ I+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELA---RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D K N+LLD D+ I DF + F ++ S + YD G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL--FQGKKYD-GP 192
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPID 240
EV D ++ G++L +V+ P D
Sbjct: 193 EV----DVWSLGVILYTLVSGSLPFD 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 126 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 171
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 172 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 226
Query: 259 NRVMD 263
+ V +
Sbjct: 227 DFVTE 231
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 127 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE 177
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S A VA ++YL + +H D NVL+ D I DF LAR + +
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-YK 248
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+LL E+ T
Sbjct: 249 KTTNG-RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 216 VSTNG-DAYNYGILLLEMVTRR 236
T D ++ G +L EM++ R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 46/206 (22%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQGAS-KSFMAECKALKNICHRNL 131
+ L+ IG G+F V L VA+K++ Q +S + E + +K + H N+
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 132 VRFISI---------AIDVASA---LDYLHHHC----------------------QELIL 157
V+ + ++ AS DYL H Q+ I+
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELA---RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D K N+LLD D+ I DF + F ++ S + YD G
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL--FQGKKYD-GP 185
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPID 240
EV D ++ G++L +V+ P D
Sbjct: 186 EV----DVWSLGVILYTLVSGSLPFD 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 131 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE 181
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 125 NICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184
N+ + LVRF+ +D+A ++YL +H D N +L D+ + DF L+
Sbjct: 133 NLPLQTLVRFM---VDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLS-- 184
Query: 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR 235
R+ S + + + AL+ + + + D + +G+ + E++TR
Sbjct: 185 RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 126 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE 176
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 85/223 (38%), Gaps = 46/223 (20%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL--SIQCQGASKSFMAECKALKNICHR 129
D + +I IG G++ V L VAIK + + +K + E K LK+ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 130 NLV---------------RFISIAIDV-ASALDYLHHHCQEL------------------ 155
N++ + + + +D+ S L + H Q L
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 156 -----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDY 210
++H D KPSN+L++ + IGDF +AR Q T Y A +
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 211 DLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNF 252
L E + D ++ G + EM+ RR+ +F G +H
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQ----LFPGKNYVHQL 272
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 88/226 (38%), Gaps = 60/226 (26%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSI-QCQGAS------KSFMAECKALKNICHRNLV 132
IG G F V++G +++VVAIK L + +G + + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 133 RF------------------------------------ISIAIDVASALDYLHHHCQELI 156
+ + + +D+A ++Y+ + I
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPI 145
Query: 157 LHCDPKPSNVLLDN-----DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+H D + N+ L + + A + DF L S + S +G+ + A +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFSL-------SQQSVHSVSGLLGNFQWMAPE-T 197
Query: 212 LGSE---VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
+G+E + D Y++ ++L ++T P D G + N R
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 129 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 174
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 175 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 229
Query: 259 NRVMD 263
+ V +
Sbjct: 230 DFVTE 234
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 21/144 (14%)
Query: 118 AECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HI 176
+ K L+ +RF ++ ALDY H I+H D KP NV++D++ +
Sbjct: 119 TDFKQLRQTLTDYDIRFY--MYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRL 173
Query: 177 GDFELARFR---QEVSNPTQSSS-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEM 232
D+ LA F QE + S G + Y DY L D ++ G +L M
Sbjct: 174 IDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL--------DMWSLGCMLASM 225
Query: 233 VTRRKPIDFMFEGDLNLHNFARMA 256
+ R++P F G N R+A
Sbjct: 226 IFRKEPF---FHGHDNYDQLVRIA 246
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 96/254 (37%), Gaps = 67/254 (26%)
Query: 35 LEEYGFKKRRGPSKQPLRLTLRNAIPKEYYESLLKATDGFP----LINLIGVGSFDAVYQ 90
LE K+ G + P ++ + P Y + L K P ++ +G G++ +V
Sbjct: 11 LESTSLYKKAGSAAAPFTMSHKER-PTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCS 69
Query: 91 GVFDLNRAV-VAIKVLSIQCQGA--SKSFMAECKALKNICHRNLVRFISIAIDVASALD- 146
+D+ + +A+K LS Q +K E + LK++ H N++ + + S +
Sbjct: 70 S-YDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEF 128
Query: 147 ---YLHHH-----------CQEL-----------------------ILHCDPKPSNVLLD 169
YL H CQ+L I+H D KPSN+ ++
Sbjct: 129 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 188
Query: 170 NDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG-------DA 222
D I DF LAR + GY A + E+ N D
Sbjct: 189 EDCELKILDFGLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYNMTVDI 235
Query: 223 YNYGILLLEMVTRR 236
++ G ++ E++T R
Sbjct: 236 WSVGCIMAELLTGR 249
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 47/189 (24%)
Query: 87 AVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI----- 139
A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 140 ----DVASALDYLHHHCQELI----------------------------LHCDPKPSNVL 167
DV ++ + + ++I +H D KPSN++
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 158
Query: 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ +D I DF LAR + T T Y A + LG N D ++ G
Sbjct: 159 VKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 228 LLLEMVTRR 236
++ EMV +
Sbjct: 214 IMGEMVRHK 222
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 126 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE 176
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 125 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 170
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 171 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 225
Query: 259 NRVMD 263
+ V +
Sbjct: 226 DFVTE 230
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 126 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRTELCGTLDYLPPE 176
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 129 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRAALCGTLDYLPPE 179
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + + T+ Y +
Sbjct: 129 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRDDLCGTLDYLPPE 179
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 92/245 (37%), Gaps = 70/245 (28%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ RRT LD
Sbjct: 130 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSS------RRTTLCGTLD 175
Query: 210 YDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FP 258
Y L E+ D ++ G+L E + + P FE + + R++ FP
Sbjct: 176 Y-LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFP 230
Query: 259 NRVMD 263
+ V +
Sbjct: 231 DFVTE 235
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 85/223 (38%), Gaps = 46/223 (20%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL--SIQCQGASKSFMAECKALKNICHR 129
D + +I IG G++ V L VAIK + + +K + E K LK+ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 130 NLV---------------RFISIAIDV-ASALDYLHHHCQEL------------------ 155
N++ + + + +D+ S L + H Q L
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 156 -----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDY 210
++H D KPSN+L++ + IGDF +AR Q T Y A +
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 211 DLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNF 252
L E + D ++ G + EM+ RR+ +F G +H
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQ----LFPGKNYVHQL 273
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 47/189 (24%)
Query: 87 AVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI----- 139
A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 140 ----DVASALDYLHHHCQELI----------------------------LHCDPKPSNVL 167
DV ++ + + ++I +H D KPSN++
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ +D I DF LAR + T T Y A + LG N D ++ G
Sbjct: 159 VKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 228 LLLEMVTRR 236
++ EMV +
Sbjct: 214 IMGEMVRHK 222
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 128 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRXXLCGTLDYLPPE 178
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D NVL+D++L + DF L+R ++ + +++ G + I +TA +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGG-KIPIRWTAPEAIAFRTF 231
Query: 217 STNGDAYNYGILLLEMV 233
S+ D +++G+++ E++
Sbjct: 232 SSASDVWSFGVVMWEVL 248
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 144 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 200
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 201 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 249
Query: 255 MA 256
+A
Sbjct: 250 IA 251
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 126 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRAALCGTLDYLPPE 176
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 47/205 (22%)
Query: 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHRNLVRFI 135
++ IG G++ V ++N+ VAIK +S + Q + + E K L H N++
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 136 SI-------------------AIDVASALDYLH----HHCQEL--------------ILH 158
I D+ L H H C L +LH
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 159 CDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGSE 215
D KPSN+LL+ I DF LAR V++P + + + Y A + L S+
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLAR----VADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 216 VSTNG-DAYNYGILLLEMVTRRKPI 239
T D ++ G +L EM++ R PI
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR-PI 229
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 138 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 195 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 243
Query: 255 MA 256
+A
Sbjct: 244 IA 245
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 126 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRTXLCGTLDYLPPE 176
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 53/213 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
D F + +G G F VY N+ ++A+KVL ++ +G E + ++
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 127 CHRNLVRF---------ISIAIDVA-------------------------SALDYLHHHC 152
H N++R I + ++ A D LH+
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 132
Query: 153 QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR-----TIGYTA 207
+ ++H D KP N+L+ + G+ ++A F V P+ +RR T+ Y
Sbjct: 133 ERKVIHRDIKPENLLM-----GYKGELKIADFGWSVHAPS------LRRRXMCGTLDYLP 181
Query: 208 LDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
+ G D + G+L E + P D
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 41/197 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRFISI 137
IG G++ V++ +VA+K + + +G S + E LK + H+N+VR +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 138 A---------------------------IDVASALDYLHHHCQEL-------ILHCDPKP 163
+D +L + L +LH D KP
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKP 129
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV-STNGDA 222
N+L++ + + DF LAR P + S V T+ Y D G+++ ST+ D
Sbjct: 130 QNLLINRNGELKLADFGLAR---AFGIPVRCYSAEV-VTLWYRPPDVLFGAKLYSTSIDM 185
Query: 223 YNYGILLLEMVTRRKPI 239
++ G + E+ +P+
Sbjct: 186 WSAGCIFAELANAARPL 202
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 138 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 195 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 243
Query: 255 MA 256
+A
Sbjct: 244 IA 245
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQSS 195
++ ALDY H I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 196 S-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + Y DY L D ++ G +L M+ R++P F G N R
Sbjct: 196 YFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEPF---FHGHDNYDQLVR 244
Query: 255 MA 256
+A
Sbjct: 245 IA 246
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SALDYL H ++ +++ D K N++LD D I DF L + T + G
Sbjct: 259 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGT 315
Query: 200 RRTIGYTAL-DYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ L D D G V D + G+++ EM+ R P
Sbjct: 316 PEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLPF 352
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 38/192 (19%)
Query: 80 IGVGSFDAVYQGVFDLNRAV--VAIKVLSIQCQGA-SKSFMAECKALKNICHRNLVRFIS 136
+G G+F +V QGV+ + + VAIKVL + A ++ M E + + + + +VR I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 137 IA---------------------------IDVASALDYLHHHCQEL-------ILHCDPK 162
+ I V++ + LH + +H +
Sbjct: 404 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLA 463
Query: 163 PSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDA 222
NVLL N +A I DF L++ + + S G + + + A + + S+ D
Sbjct: 464 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINFRKFSSRSDV 522
Query: 223 YNYGILLLEMVT 234
++YG+ + E ++
Sbjct: 523 WSYGVTMWEALS 534
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SALDYL H ++ +++ D K N++LD D I DF L + T + G
Sbjct: 256 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGT 312
Query: 200 RRTIGYTAL-DYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ L D D G V D + G+++ EM+ R P
Sbjct: 313 PEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLPF 349
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 140 DVASALDYLHHHCQEL-ILHCDPKPSNVLLDNDLFA-HIGDFELARFR---QEVSNPTQS 194
++ ALDY C + I+H D KP NV++D++ + D+ LA F QE + S
Sbjct: 137 EILKALDY----CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 192
Query: 195 SS-NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFA 253
G + Y DY L D ++ G +L M+ R++P F G N
Sbjct: 193 RYFKGPELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLV 241
Query: 254 RMA 256
R+A
Sbjct: 242 RIA 244
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D NVL+D++L + DF L+R ++ + +++ G + I +TA +
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG-KIPIRWTAPEAIAFRTF 231
Query: 217 STNGDAYNYGILLLEMV 233
S+ D +++G+++ E++
Sbjct: 232 SSASDVWSFGVVMWEVL 248
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 53/213 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
D F + +G G F VY N+ ++A+KVL ++ +G E + ++
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 127 CHRNLVRF---------ISIAIDVA-------------------------SALDYLHHHC 152
H N++R I + ++ A D LH+
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 153 QELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR-----TIGYTA 207
+ ++H D KP N+L+ + G+ ++A F V P+ +RR T+ Y
Sbjct: 132 ERKVIHRDIKPENLLM-----GYKGELKIADFGWSVHAPS------LRRRXMCGTLDYLP 180
Query: 208 LDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
+ G D + G+L E + P D
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 88/226 (38%), Gaps = 60/226 (26%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSI-QCQGAS------KSFMAECKALKNICHRNLV 132
IG G F V++G +++VVAIK L + +G + + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 133 RF------------------------------------ISIAIDVASALDYLHHHCQELI 156
+ + + +D+A ++Y+ + I
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPI 145
Query: 157 LHCDPKPSNVLLDN-----DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+H D + N+ L + + A + DF L S + S +G+ + A +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGL-------SQQSVHSVSGLLGNFQWMAPE-T 197
Query: 212 LGSE---VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
+G+E + D Y++ ++L ++T P D G + N R
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 129 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRXXLCGTLDYLPPE 179
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 47/193 (24%)
Query: 83 GSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI- 139
G A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 32 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 88
Query: 140 --------DVASALDYLHHH-CQEL---------------------------ILHCDPKP 163
DV ++ + + CQ + I+H D KP
Sbjct: 89 QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 148
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAY 223
SN+++ +D I DF LAR + T T Y A + LG N D +
Sbjct: 149 SNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 203
Query: 224 NYGILLLEMVTRR 236
+ G ++ EMV +
Sbjct: 204 SVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 47/193 (24%)
Query: 83 GSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI- 139
G A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 39 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 95
Query: 140 --------DVASALDYLHHH-CQEL---------------------------ILHCDPKP 163
DV ++ + + CQ + I+H D KP
Sbjct: 96 QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 155
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAY 223
SN+++ +D I DF LAR + T T Y A + LG N D +
Sbjct: 156 SNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Query: 224 NYGILLLEMVTRR 236
+ G ++ EMV +
Sbjct: 211 SVGCIMGEMVRHK 223
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 54/210 (25%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQGAS-KSFMAECKALKNICHRNL 131
+ L+ IG G+F V L VA++++ Q +S + E + +K + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 132 VRFISI---------AIDVASA---LDYLHHHC----------------------QELIL 157
V+ + ++ AS DYL H Q+ I+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELA-------RFRQEVSNPTQSSSNGVRRTIGYTALDY 210
H D K N+LLD D+ I DF + + + +P ++ + Y
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPE------LFQGKKY 189
Query: 211 DLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
D G EV D ++ G++L +V+ P D
Sbjct: 190 D-GPEV----DVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 46/206 (22%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQGAS-KSFMAECKALKNICHRNL 131
+ L+ IG G+F V L VA++++ Q +S + E + +K + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 132 VRFISI---------AIDVASA---LDYLHHHC----------------------QELIL 157
V+ + ++ AS DYL H Q+ I+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELA---RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D K N+LLD D+ I DF + F ++ S + YD G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL--FQGKKYD-GP 192
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPID 240
EV D ++ G++L +V+ P D
Sbjct: 193 EV----DVWSLGVILYTLVSGSLPFD 214
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 89/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F P+ S + T+ Y +
Sbjct: 127 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSCHAPS-SRRTTLSGTLDYLPPE 177
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTXXKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 47/193 (24%)
Query: 83 GSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI- 139
G A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 38 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 140 --------DVASALDYLHHH-CQEL---------------------------ILHCDPKP 163
DV ++ + + CQ + I+H D KP
Sbjct: 95 QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAY 223
SN+++ +D I DF LAR + T T Y A + LG N D +
Sbjct: 155 SNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 224 NYGILLLEMVTRR 236
+ G ++ EMV +
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 89/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY + ++A+KVL ++ G E + ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 123 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE 173
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 47/193 (24%)
Query: 83 GSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI- 139
G A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 38 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 140 --------DVASALDYLHHH-CQEL---------------------------ILHCDPKP 163
DV ++ + + CQ + I+H D KP
Sbjct: 95 QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAY 223
SN+++ +D I DF LAR + T T Y A + LG N D +
Sbjct: 155 SNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 224 NYGILLLEMVTRR 236
+ G ++ EMV +
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 47/193 (24%)
Query: 83 GSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI- 139
G A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 39 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 95
Query: 140 --------DVASALDYLHHH-CQEL---------------------------ILHCDPKP 163
DV ++ + + CQ + I+H D KP
Sbjct: 96 QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 155
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAY 223
SN+++ +D I DF LAR + T T Y A + LG N D +
Sbjct: 156 SNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Query: 224 NYGILLLEMVTRR 236
+ G ++ EMV +
Sbjct: 211 SVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 47/193 (24%)
Query: 83 GSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI- 139
G A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 37 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 93
Query: 140 --------DVASALDYLHHH-CQEL---------------------------ILHCDPKP 163
DV ++ + + CQ + I+H D KP
Sbjct: 94 QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 153
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAY 223
SN+++ +D I DF LAR + T T Y A + LG N D +
Sbjct: 154 SNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 208
Query: 224 NYGILLLEMVTRR 236
+ G ++ EMV +
Sbjct: 209 SVGCIMGEMVRHK 221
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 126 ---SKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRXXLCGTLDYLPPE 176
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 47/193 (24%)
Query: 83 GSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI- 139
G A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 31 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 87
Query: 140 --------DVASALDYLHHH-CQEL---------------------------ILHCDPKP 163
DV ++ + + CQ + I+H D KP
Sbjct: 88 QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 147
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAY 223
SN+++ +D I DF LAR + T T Y A + LG N D +
Sbjct: 148 SNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 202
Query: 224 NYGILLLEMVTRR 236
+ G ++ EMV +
Sbjct: 203 SVGCIMGEMVRHK 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 47/193 (24%)
Query: 83 GSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI- 139
G A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 32 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 88
Query: 140 --------DVASALDYLHHH-CQEL---------------------------ILHCDPKP 163
DV ++ + + CQ + I+H D KP
Sbjct: 89 QKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 148
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAY 223
SN+++ +D I DF LAR + T T Y A + LG N D +
Sbjct: 149 SNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 203
Query: 224 NYGILLLEMVTRR 236
+ G ++ EMV +
Sbjct: 204 SVGCIMGEMVRHK 216
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G+++ EM+
Sbjct: 202 YKENVDIWSVGVIMGEMI 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 47/189 (24%)
Query: 87 AVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI----- 139
A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 80 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 140 ----DVASALDYLHHH-CQEL---------------------------ILHCDPKPSNVL 167
DV ++ + + CQ + I+H D KPSN++
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Query: 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ +D I DF LAR + T T Y A + LG N D ++ G
Sbjct: 197 VKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 228 LLLEMVTRR 236
++ EMV +
Sbjct: 252 IMGEMVRHK 260
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 47/189 (24%)
Query: 87 AVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI----- 139
A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 140 ----DVASALDYLHHHCQELI----------------------------LHCDPKPSNVL 167
DV ++ + + ++I +H D KPSN++
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 158
Query: 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ +D I DF LAR + T T Y A + LG N D ++ G
Sbjct: 159 VKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 228 LLLEMVTRR 236
++ EMV +
Sbjct: 214 IMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 47/189 (24%)
Query: 87 AVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI----- 139
A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 35 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 140 ----DVASALDYLHHHCQELI----------------------------LHCDPKPSNVL 167
DV ++ + + ++I +H D KPSN++
Sbjct: 92 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV 151
Query: 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ +D I DF LAR + T T Y A + LG N D ++ G
Sbjct: 152 VKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 228 LLLEMVTRR 236
++ EMV +
Sbjct: 207 IMGEMVRHK 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ +DY+H + ++H D KPSN+ L + IGDF L + ++ ++ S G
Sbjct: 145 ITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK--NDGKRTRSKGTL 199
Query: 201 RTIGYTAL-DYDLGSEVSTNGDAYNYGILLLEMV 233
R + + D G EV D Y G++L E++
Sbjct: 200 RYMSPEQISSQDYGKEV----DLYALGLILAELL 229
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV----SNPTQSSSNGVR--RTIGYTALD 209
++H D KPSN+L++++ + DF LAR E S PT S V T Y A +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 210 YDLGS-EVSTNGDAYNYGILLLEMVTRR 236
L S + S D ++ G +L E+ RR
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G+++ EM+
Sbjct: 202 YKENVDIWSVGVIMGEMI 219
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SALDYL H ++ +++ D K N++LD D I DF L + T G
Sbjct: 117 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGT 173
Query: 200 RRTIGYTAL-DYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ L D D G V D + G+++ EM+ R P
Sbjct: 174 PEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLPF 210
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 81/218 (37%), Gaps = 48/218 (22%)
Query: 66 SLLKATDGFPLIN------LIGVGSFDAVYQGVFDLNRAVVAIKVLS-IQCQGAS-KSFM 117
S+ ATD P I IG G+F V L VA+K++ Q S +
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 118 AECKALKNICHRNLVRFISI---------AIDVASA---LDYLHHHC------------- 152
E + +K + H N+V+ + ++ AS DYL H
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 122
Query: 153 ---------QELILHCDPKPSNVLLDNDLFAHIGDFELA-RFRQEVSNPTQSSSNGVRRT 202
Q+ I+H D K N+LLD D+ I DF + F T S
Sbjct: 123 IVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAP 182
Query: 203 IGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
+ YD G EV D ++ G++L +V+ P D
Sbjct: 183 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFD 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 46/206 (22%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQGAS-KSFMAECKALKNICHRNL 131
+ L+ IG G+F V L VA+K++ Q +S + E + +K + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 132 VRFISI---------AIDVASA---LDYLHHHC----------------------QELIL 157
V+ + ++ AS DYL H Q+ I+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELA---RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
H D K N+LLD D+ I DF + F ++ + + YD G
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPEL--FQGKKYD-GP 192
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPID 240
EV D ++ G++L +V+ P D
Sbjct: 193 EV----DVWSLGVILYTLVSGSLPFD 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 80 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 139
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 140 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 196
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 237
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SALDYL H ++ +++ D K N++LD D I DF L + T G
Sbjct: 116 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGT 172
Query: 200 RRTIGYTAL-DYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ L D D G V D + G+++ EM+ R P
Sbjct: 173 PEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLPF 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 516
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 517 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ SALDYL H ++ +++ D K N++LD D I DF L + T G
Sbjct: 118 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGT 174
Query: 200 RRTIGYTAL-DYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ L D D G V D + G+++ EM+ R P
Sbjct: 175 PEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLPF 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 79 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 138
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 139 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 195
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 236
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 74 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 133
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 231
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 105 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 164
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 165 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 221
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 222 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 262
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 137 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 47/189 (24%)
Query: 87 AVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRFISIAI----- 139
A Y V D N VAIK LS Q Q +K E +K + H+N++ +++
Sbjct: 80 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 140 ----DVASALDYLHHH-CQEL---------------------------ILHCDPKPSNVL 167
DV ++ + + CQ + I+H D KPSN++
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Query: 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ +D I DF LAR + T T Y A + LG N D ++ G
Sbjct: 197 VKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 228 LLLEMVTRR 236
++ EMV +
Sbjct: 252 IMGEMVRHK 260
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV----SNPT--QSSSNGVRRTIGYTALD 209
++H D KPSN+L++++ + DF LAR E S PT QS T Y A +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 210 YDLGS-EVSTNGDAYNYGILLLEMVTRR 236
L S + S D ++ G +L E+ RR
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV----SNPT--QSSSNGVRRTIGYTALD 209
++H D KPSN+L++++ + DF LAR E S PT QS T Y A +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 210 YDLGS-EVSTNGDAYNYGILLLEMVTRR 236
L S + S D ++ G +L E+ RR
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
+++ AL +LH Q+ I++ D KP N++L++ + DF L + T +
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG-- 183
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT---------RRKPIDFMFEGDLNL 249
TI Y A + + S + D ++ G L+ +M+T R+K ID + + LNL
Sbjct: 184 --TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 82 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 141
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ ++ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 142 IAARNVLVSSNDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 198
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 239
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 80/223 (35%), Gaps = 77/223 (34%)
Query: 80 IGVGSFDAVYQG-VFDL----NRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF 134
+G G+F V+ ++L ++ +VA+K L A K F E + L N+ H ++V+F
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 135 -----------------------------------------------------ISIAIDV 141
+ IA +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 142 ASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR 201
AS + YL + +H D N L+ +L IGDF ++R S R
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR---------DVYSTDYYR 190
Query: 202 TIGYTAL-------DYDLGSEVSTNGDAYNYGILLLEMVTRRK 237
G+T L + + + +T D +++G++L E+ T K
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 78/217 (35%), Gaps = 68/217 (31%)
Query: 80 IGVGSFDAV-----YQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF 134
+G G+F V Y + ++ +VA+K L A K F E + L N+ H ++V+F
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 135 ISIAID---VASALDYLHH---------HCQELILHCDPKPS------------------ 164
+ ++ + +Y+ H H + +L + P
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 165 -----------------NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
N L+ +L IGDF ++R S R G+T
Sbjct: 141 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR---------DVYSTDYYRVGGHTM 191
Query: 208 L-------DYDLGSEVSTNGDAYNYGILLLEMVTRRK 237
L + + + +T D ++ G++L E+ T K
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 58/239 (24%)
Query: 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNI 126
A + F + +G G F VY ++ ++A+KVL ++ G E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 127 CHRNLVRFI-------------------------------------SIAIDVASALDYLH 149
H N++R + ++A+AL Y H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209
+ ++H D KP N+LL + G+ ++A F V P+ S + T+ Y +
Sbjct: 126 ---SKKVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPS-SRRAALCGTLDYLPPE 176
Query: 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
G D ++ G+L E + + P FE + + R++ FP+ V +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQDTYKRISRVEFTFPDFVTE 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ L Y+H +LH D KPSN+L++ I DF LAR +++P + +
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLAR----IADPEHDHTGFLT 205
Query: 201 RTIG---YTALDYDLGSEVSTNG-DAYNYGILLLEMVTRR 236
+ Y A + L S+ T D ++ G +L EM++ R
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 195
Query: 216 VSTNGDAYNYGILLLEMVTRR 236
N D ++ G ++ EMV +
Sbjct: 196 YKENVDLWSVGCIMGEMVCHK 216
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
++I V L YL + I+H D KPSN+L+++ + DF ++ +
Sbjct: 112 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS------GQLIDEMA 163
Query: 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
N T Y + + G+ S D ++ G+ L+EM R P
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 206
Query: 216 VSTNGDAYNYGILLLEMVTRR 236
N D ++ G ++ EMV +
Sbjct: 207 YKENVDLWSVGCIMGEMVCHK 227
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 16/119 (13%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
+++ AL +LH Q+ I++ D KP N++L++ + DF L ++ + + T ++
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLC--KESIHDGT--VTHXF 181
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT---------RRKPIDFMFEGDLNL 249
TI Y A + + S + D ++ G L+ +M+T R+K ID + + LNL
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 77/204 (37%), Gaps = 42/204 (20%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQGAS-KSFMAECKALKNICHRNL 131
+ L+ IG G+F V L VAIK++ Q S + E + +K + H N+
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 132 VRFISIA---------IDVASA---LDYLHHHC----------------------QELIL 157
V+ + ++ AS DYL H Q+ I+
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELA-RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
H D K N+LLD D+ I DF + F T S + YD G EV
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD-GPEV 192
Query: 217 STNGDAYNYGILLLEMVTRRKPID 240
D ++ G++L +V+ P D
Sbjct: 193 ----DVWSLGVILYTLVSGSLPFD 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 87/226 (38%), Gaps = 60/226 (26%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSI-QCQGAS------KSFMAECKALKNICHRNLV 132
IG G F V++G +++VVAIK L + +G + + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 133 RF------------------------------------ISIAIDVASALDYLHHHCQELI 156
+ + + +D+A ++Y+ + I
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPI 145
Query: 157 LHCDPKPSNVLLDN-----DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYD 211
+H D + N+ L + + A + DF S + S +G+ + A +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADF-------GTSQQSVHSVSGLLGNFQWMAPE-T 197
Query: 212 LGSE---VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
+G+E + D Y++ ++L ++T P D G + N R
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMVTRR 236
N D ++ G ++ EMV +
Sbjct: 202 YKENVDIWSVGCIMGEMVCHK 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 80/210 (38%), Gaps = 52/210 (24%)
Query: 76 LINLIGVGSFDAVYQGVF---DLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRN 130
L ++G G F +V +G D VA+K + + Q + F++E +K+ H N
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 131 LVRFISIAIDVASA--------LDYL-------------------HHHCQELI------- 156
++R + + I+++S L ++ H Q L+
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 157 -----------LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGY 205
LH D N +L +D+ + DF L+ ++ S + + +
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS--KKIYSGDYYRQGRIAKMPVKW 215
Query: 206 TALDYDLGSEVSTNGDAYNYGILLLEMVTR 235
A++ ++ D + +G+ + E+ TR
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 61/211 (28%)
Query: 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI-- 135
++G G F + V+ +K L + ++F+ E K ++ + H N+++FI
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 136 ------------------------------------SIAIDVASALDYLHHHCQELILHC 159
S A D+AS + YLH I+H
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHR 132
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR------RTIGYTALD--YD 211
D N L+ + + DF LAR V TQ G+R R YT + Y
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLM--VDEKTQPE--GLRSLKKPDRKKRYTVVGNPYW 188
Query: 212 LGSEVSTNG-------DAYNYGILLLEMVTR 235
+ E+ NG D +++GI+L E++ R
Sbjct: 189 MAPEM-INGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMVTRR 236
N D ++ G ++ EMV +
Sbjct: 202 YKENVDLWSVGCIMGEMVCHK 222
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
IA+ + AL++LH ++H D KPSNVL++ DF ++ + V + +
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDID 196
Query: 197 NGVRRTIGYTALDYDLGSE-VSTNGDAYNYGILLLEMVTRRKPID 240
G + ++ +L + S D ++ GI +E+ R P D
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
D+ ++YLH+ + I+H D KPSN+L+ D I DF VSN + S +
Sbjct: 145 DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADF-------GVSNEFKGSDALL 194
Query: 200 RRTIGYTAL 208
T+G A
Sbjct: 195 SNTVGTPAF 203
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 59/164 (35%), Gaps = 62/164 (37%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC---- 127
D L+ LIG G + AVY+G L+ VA+KV S + ++F+ E KNI
Sbjct: 13 DNLKLLELIGRGRYGAVYKG--SLDERPVAVKVFSFANR---QNFINE----KNIYRVPL 63
Query: 128 --HRNLVRFI-----------------------------------------SIAIDVASA 144
H N+ RFI +A V
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRG 123
Query: 145 LDYLH------HHCQELILHCDPKPSNVLLDNDLFAHIGDFELA 182
L YLH H + I H D NVL+ ND I DF L+
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 78/212 (36%), Gaps = 49/212 (23%)
Query: 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKAL-K 124
K +D F + +IG GSF V A+KVL +I + K M+E L K
Sbjct: 36 KPSD-FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 125 NICHRNLV-------------------------------------RFISIAIDVASALDY 147
N+ H LV R A ++ASAL Y
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGY 154
Query: 148 LHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
LH I++ D KP N+LLD+ + DF L + E N T S+ G T Y A
Sbjct: 155 LHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE-HNSTTSTFCG---TPEYLA 207
Query: 208 LDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
+ D + G +L EM+ P
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 90/237 (37%), Gaps = 59/237 (24%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL--SIQCQGASKSFMAECKALKNIC-HRN 130
+ L+ +G G++ V++ + VVA+K + + Q ++ E L + H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 131 LVRFISIAI-----DVASALDYLHHHCQELI----------------------------- 156
+V +++ DV DY+ +I
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGL 130
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELAR----FRQEVSNPTQSSSNGVRR----------- 201
LH D KPSN+LL+ + + DF L+R R+ +N S +
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDY 190
Query: 202 --TIGYTALDYDLGSEVSTNG-DAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255
T Y A + LGS T G D ++ G +L E++ KPI F G ++ R+
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC-GKPI---FPGSSTMNQLERI 243
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 41/197 (20%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRFISI 137
IG G++ V++ +VA+K + + +G S + E LK + H+N+VR +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 138 A---------------------------IDVASALDYLHHHCQEL-------ILHCDPKP 163
+D +L + L +LH D KP
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKP 129
Query: 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV-STNGDA 222
N+L++ + + +F LAR P + S V T+ Y D G+++ ST+ D
Sbjct: 130 QNLLINRNGELKLANFGLAR---AFGIPVRCYSAEV-VTLWYRPPDVLFGAKLYSTSIDM 185
Query: 223 YNYGILLLEMVTRRKPI 239
++ G + E+ +P+
Sbjct: 186 WSAGCIFAELANAGRPL 202
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 31/94 (32%)
Query: 128 HRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187
H N + + DVASALD+LH+ + I H D KP N+L +
Sbjct: 107 HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCE------------------ 145
Query: 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGD 221
+P Q S + D+DLGS + NGD
Sbjct: 146 --HPNQVSPVKI--------CDFDLGSGIKLNGD 169
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 202
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 203 YKENVDIWSVGCIMGEMI 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ IG G++ +V FD + VA+K LS Q +K
Sbjct: 16 QELNKTIWEVPERYQNLSPIGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD------------ 182
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 183 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
++ AL++LH I++ D K N+LLD++ + DF L+ ++ V++ T+ + +
Sbjct: 167 EIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLS--KEFVADETERAYDFC 221
Query: 200 RRTIGYTALDYDLGSEVSTNG--DAYNYGILLLEMVTRRKPIDFMFEGDLN 248
TI Y A D G + + D ++ G+L+ E++T P F +G+ N
Sbjct: 222 -GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP--FTVDGEKN 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 100/276 (36%), Gaps = 82/276 (29%)
Query: 44 RGPSKQPLRLT---LRNAI--------PKEYYESLLKATDGFPLINLIGVGSFDAVYQGV 92
R P ++P R++ R A+ P+ Y ++ +K IG GS V
Sbjct: 122 RSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK----------IGEGSTGIVCIAT 171
Query: 93 FDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLV-------------------- 132
+ +VA+K + ++ Q + E +++ H N+V
Sbjct: 172 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231
Query: 133 ----------------RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHI 176
+ ++ + V AL LH ++H D K ++LL +D +
Sbjct: 232 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKL 288
Query: 177 GDF--------ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGIL 228
DF E+ R + V P + + R L Y G EV D ++ GI+
Sbjct: 289 SDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR------LPY--GPEV----DIWSLGIM 336
Query: 229 LLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264
++EMV P + E L R P R+ ++
Sbjct: 337 VIEMVDGEPP--YFNEPPLKAMKMIRDNLPPRLKNL 370
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + V R Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRY--YRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 138 AIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197
A +++ L +LH I++ D K NV+LD++ I DF + + + T
Sbjct: 126 AAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMDGVTTREFC 181
Query: 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
G I + Y + D + YG+LL EM+ + P D
Sbjct: 182 GTPDYIAPEIIAY---QPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 516
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 517 IAARNVLVSATDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 614
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TACTNFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
+ N D ++ G ++ E+V
Sbjct: 202 YAANVDIWSVGCIMGELV 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 22 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 80
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 140
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD------------ 188
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 189 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 100/276 (36%), Gaps = 82/276 (29%)
Query: 44 RGPSKQPLRLT---LRNAI--------PKEYYESLLKATDGFPLINLIGVGSFDAVYQGV 92
R P ++P R++ R A+ P+ Y ++ +K IG GS V
Sbjct: 45 RSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK----------IGEGSTGIVCIAT 94
Query: 93 FDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLV-------------------- 132
+ +VA+K + ++ Q + E +++ H N+V
Sbjct: 95 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154
Query: 133 ----------------RFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHI 176
+ ++ + V AL LH ++H D K ++LL +D +
Sbjct: 155 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKL 211
Query: 177 GDF--------ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGIL 228
DF E+ R + V P + + R L Y G EV D ++ GI+
Sbjct: 212 SDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR------LPY--GPEV----DIWSLGIM 259
Query: 229 LLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264
++EMV P + E L R P R+ ++
Sbjct: 260 VIEMVDGEPP--YFNEPPLKAMKMIRDNLPPRLKNL 293
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 22/114 (19%)
Query: 111 GASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN 170
GA + + +C+AL + V+F+ + L Y+H I+H D KPSNV ++
Sbjct: 108 GADLNNIVKCQALSD----EHVQFL--VYQLLRGLKYIHSAG---IIHRDLKPSNVAVNE 158
Query: 171 DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
D I DF LAR E GY A + E+ N YN
Sbjct: 159 DCELRILDFGLARQADE-------------EMTGYVATRWYRAPEIMLNWMHYN 199
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 91 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 147
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 148 DLAARNCMVAEDFTVKIGDFGMTRDIXE-TDXXRKGGKGL-LPVRWMSPESLKDGVFTTY 205
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 206 SDVWSFGVVLWEIAT 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 121 KALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180
+ L+ + + R + ++A+AL Y H + ++H D KP N+LL ++ G+ +
Sbjct: 101 RELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSN-----GELK 152
Query: 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
+A F V P+ S + + T+ Y + G D ++ G+L E + P
Sbjct: 153 IADFGWSVHAPS-SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP-- 209
Query: 241 FMFEGDLNLHNFARMA-----FPNRVMD 263
FE + R++ FP+ V +
Sbjct: 210 --FEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 46/221 (20%)
Query: 80 IGVGSFDAVYQGVF--DLNRAV-VAIKVLSIQCQGAS--KSFMAECKALKNICHRNLVRF 134
IG G F V+QG++ N A+ VAIK C S + F+ E ++ H ++V+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 135 ISI---------------------------AIDVASALDYLHHHCQEL-------ILHCD 160
I + ++D+AS + Y + L +H D
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRD 136
Query: 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG 220
NVL+ +GDF L+R+ + + T ++ + I + A + ++
Sbjct: 137 IAARNVLVSATDCVKLGDFGLSRY---MEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 221 DAYNYGILLLEMVTRR-KPIDFMFEGDL--NLHNFARMAFP 258
D + +G+ + E++ KP + D+ + N R+ P
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD------------ 182
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 183 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSKPFQSIIHAKRTY 81
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 189
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 190 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKS----FMAECKALKNICHRNLVRF 134
IG GSF VY+G+ V + +Q + +KS F E + LK + H N+VRF
Sbjct: 34 IGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 37/193 (19%)
Query: 55 LRNAIPKEYYESLLKATDGFP-LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGAS 113
+R A +E + +L+ G P +I LI + VFDL R +G
Sbjct: 142 VREATRRETH--ILRQVAGHPHIITLIDSYESSSFMFLVFDLMR------------KGEL 187
Query: 114 KSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173
++ E AL R+++R + A+ +LH + I+H D KP N+LLD+++
Sbjct: 188 FDYLTEKVALSEKETRSIMR------SLLEAVSFLHANN---IVHRDLKPENILLDDNMQ 238
Query: 174 AHIGDFELA-------RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYG 226
+ DF + + R+ P + ++ ++ T Y G EV D + G
Sbjct: 239 IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY--GKEV----DLWACG 292
Query: 227 ILLLEMVTRRKPI 239
++L ++ P
Sbjct: 293 VILFTLLAGSPPF 305
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 44/147 (29%)
Query: 126 ICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR 185
+ +++R I + + YLH Q I+H D KP N+LL + +GD ++ F
Sbjct: 128 VSENDVIRLIK---QILEGVYYLH---QNNIVHLDLKPQNILLSS--IYPLGDIKIVDF- 178
Query: 186 QEVSNPTQSSSNGVRRTIGYTA----------------LDYDLGSEVSTNGDAYNYGILL 229
G+ R IG+ L+YD ++T D +N GI+
Sbjct: 179 ------------GMSRKIGHACELREIMGTPEYLAPEILNYD---PITTATDMWNIGIIA 223
Query: 230 LEMVTRRKPIDFMFEGDLNLHNFARMA 256
++T P F G+ N + ++
Sbjct: 224 YMLLTHTSP----FVGEDNQETYLNIS 246
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 22/114 (19%)
Query: 111 GASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN 170
GA + + +C+AL + V+F+ + L Y+H I+H D KPSNV ++
Sbjct: 116 GADLNNIVKCQALSD----EHVQFL--VYQLLRGLKYIHSAG---IIHRDLKPSNVAVNE 166
Query: 171 DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYN 224
D I DF LAR E GY A + E+ N YN
Sbjct: 167 DSELRILDFGLARQADE-------------EMTGYVATRWYRAPEIMLNWMHYN 207
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 30/154 (19%)
Query: 121 KALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180
+ L+ + + R + ++A+AL Y H + ++H D KP N+LL ++ G+ +
Sbjct: 101 RELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSN-----GELK 152
Query: 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV------STNGDAYNYGILLLEMVT 234
+A F V P+ RRT LDY L E+ D ++ G+L E +
Sbjct: 153 IADFGWSVHAPSS------RRTTLCGTLDY-LPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
Query: 235 RRKPIDFMFEGDLNLHNFARMA-----FPNRVMD 263
P FE + R++ FP+ V +
Sbjct: 206 GMPP----FEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 54/165 (32%)
Query: 66 SLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL------SIQCQGASKSFMAE 119
S + D + + +LIG GS+ V + L + VVAIK + I C K + E
Sbjct: 47 SDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDC----KRILRE 102
Query: 120 CKALKNICHRNLVRFISIAI--DVAS---------------------------------- 143
L + H ++V+ + I I DV
Sbjct: 103 IAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLL 162
Query: 144 -----ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
+ Y+H ILH D KP+N L++ D + DF LAR
Sbjct: 163 YNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARF 184
+LH D KP+NV LD +GDF LAR
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 30 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 88
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 148
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 196
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 197 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 100 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 156
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 157 DLAARNCMVAEDFTVKIGDFGMTRDIXE-TDXXRKGGKGL-LPVRWMSPESLKDGVFTTY 214
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 215 SDVWSFGVVLWEIAT 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARF 184
+LH D KP+NV LD +GDF LAR
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 81
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 189
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 190 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 179
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 180 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 23 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 81
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 189
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 190 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 31 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 89
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 197
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 198 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 22 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 80
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 140
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 188
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 189 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 34 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 92
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 152
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 200
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 201 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 179
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 180 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR--------FRQEVSNPT 192
+ AL Y+H I+H + KP N+ +D IGDF LA+ + + N
Sbjct: 125 ILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 193 QSSSNGVRRTIG---YTALDY-DLGSEVSTNGDAYNYGILLLEMV 233
SS N + IG Y A + D + D Y+ GI+ E +
Sbjct: 182 GSSDN-LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 184
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 185 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARF 184
+LH D KP+NV LD +GDF LAR
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 182
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 183 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 10 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 68
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 128
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 129 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 176
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 177 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 179
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 180 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD------------ 184
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 185 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TASTNFMMTPYVVTRYYRAPEVILGMG 199
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ E+V
Sbjct: 200 YKENVDIWSVGCIMGELV 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 183
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 184 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECK-ALKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + A+ N + +L + I +A ++A + YL+ + +H
Sbjct: 96 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 152
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 153 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 210
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 211 SDVWSFGVVLWEIAT 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 104 VLSIQCQGASKSFMAECKALKNICHRN-------LVRFISIAIDVASALDYLHHHCQELI 156
V+ + G KS++ ++L+ N L I +A ++A + YL+ +
Sbjct: 95 VMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKF 148
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D N ++ +D IGDF + R E ++ + G+ + + A +
Sbjct: 149 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGL-LPVRWMAPESLKDGVF 206
Query: 217 STNGDAYNYGILLLEMVT 234
+T+ D +++G++L E+ +
Sbjct: 207 TTSSDMWSFGVVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 104 VLSIQCQGASKSFMAECKALKNICHRN-------LVRFISIAIDVASALDYLHHHCQELI 156
V+ + G KS++ ++L+ N L I +A ++A + YL+ +
Sbjct: 98 VMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKF 151
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D N ++ +D IGDF + R E ++ + G+ + + A +
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGL-LPVRWMAPESLKDGVF 209
Query: 217 STNGDAYNYGILLLEMVT 234
+T+ D +++G++L E+ +
Sbjct: 210 TTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 104 VLSIQCQGASKSFMAECKALKNICHRN-------LVRFISIAIDVASALDYLHHHCQELI 156
V+ + G KS++ ++L+ N L I +A ++A + YL+ +
Sbjct: 98 VMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKF 151
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D N ++ +D IGDF + R E ++ + G+ + + A +
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGL-LPVRWMAPESLKDGVF 209
Query: 217 STNGDAYNYGILLLEMVT 234
+T+ D +++G++L E+ +
Sbjct: 210 TTSSDMWSFGVVLWEITS 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------------HTA 183
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECK-ALKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + A+ N + +L + I +A ++A + YL+ + +H
Sbjct: 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 162
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 220
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 221 SDVWSFGVVLWEIAT 235
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 28/157 (17%)
Query: 119 ECKALKNIC---HRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAH 175
E AL +I N + ++ + V AL LH ++H D K ++LL +D
Sbjct: 109 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 165
Query: 176 IGDF--------ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ DF E+ R + V P + + R L Y G EV D ++ GI
Sbjct: 166 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR------LPY--GPEV----DIWSLGI 213
Query: 228 LLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264
+++EMV P + E L R P R+ ++
Sbjct: 214 MVIEMVDGEPP--YFNEPPLKAMKMIRDNLPPRLKNL 248
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 18 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 76
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD------------ 184
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 185 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 28/157 (17%)
Query: 119 ECKALKNIC---HRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAH 175
E AL +I N + ++ + V AL LH ++H D K ++LL +D
Sbjct: 111 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 167
Query: 176 IGDF--------ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ DF E+ R + V P + + R L Y G EV D ++ GI
Sbjct: 168 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR------LPY--GPEV----DIWSLGI 215
Query: 228 LLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264
+++EMV P + E L R P R+ ++
Sbjct: 216 MVIEMVDGEPP--YFNEPPLKAMKMIRDNLPPRLKNL 250
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215
I+H D KPSN+++ +D I DF LAR + T T Y A + LG
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMVPFVVTRYYRAPEVILGMG 203
Query: 216 VSTNGDAYNYGILLLEMV 233
N D ++ G ++ EM+
Sbjct: 204 YKENVDIWSVGCIMGEMI 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 183
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 184 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 16 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 74
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 182
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 183 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 8 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 66
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 126
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 174
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 175 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 13 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 71
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD------------ 179
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 180 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 124 KNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
KN NL + + A+ + +DYL +H D NVL++++ IGDF L +
Sbjct: 106 KNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 162
Query: 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
E + + + + A + + S+ D +++G+ L E++T
Sbjct: 163 -AIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 9 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 67
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 127
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 128 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 175
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 176 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 7 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 65
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 173
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 174 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 124 KNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183
KN NL + + A+ + +DYL +H D NVL++++ IGDF L +
Sbjct: 118 KNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174
Query: 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
E + + + + A + + S+ D +++G+ L E++T
Sbjct: 175 -AIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 34 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 92
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 152
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 200
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 201 -EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 131 LVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIG--DFELARFR-QE 187
LVR A + LD LH + I+HCD KP N+LL + I DF + + Q
Sbjct: 201 LVR--KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
V QS Y A + LG+ D ++ G +L E++T + EGD
Sbjct: 256 VYTXIQSRF--------YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 17 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 75
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD------------ 183
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 184 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 8 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 66
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 126
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR +
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------ 174
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 175 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 131 LVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIG--DFELARFR-QE 187
LVR A + LD LH + I+HCD KP N+LL + I DF + + Q
Sbjct: 201 LVR--KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
V QS Y A + LG+ D ++ G +L E++T + EGD
Sbjct: 256 VYTXIQSRF--------YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + + H+
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ 94
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 95 NIVRCIGVSL 104
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 28/157 (17%)
Query: 119 ECKALKNIC---HRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAH 175
E AL +I N + ++ + V AL LH ++H D K ++LL +D
Sbjct: 104 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 160
Query: 176 IGDF--------ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGI 227
+ DF E+ R + V P + + R L Y G EV D ++ GI
Sbjct: 161 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR------LPY--GPEV----DIWSLGI 208
Query: 228 LLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264
+++EMV P + E L R P R+ ++
Sbjct: 209 MVIEMVDGEPP--YFNEPPLKAMKMIRDNLPPRLKNL 243
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 25/137 (18%)
Query: 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF--------ELARFRQE 187
++ + V AL LH ++H D K ++LL +D + DF E+ R +
Sbjct: 120 AVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 176
Query: 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDL 247
V P + + R L Y G EV D ++ GI+++EMV P + E L
Sbjct: 177 VGTPYWMAPELISR------LPY--GPEV----DIWSLGIMVIEMVDGEPP--YFNEPPL 222
Query: 248 NLHNFARMAFPNRVMDI 264
R P R+ ++
Sbjct: 223 KAMKMIRDNLPPRLKNL 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 100 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 150
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---- 220
N+ ++ D I DF LAR + GY A + E+ N
Sbjct: 151 NLAVNEDCELKILDFGLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYN 197
Query: 221 ---DAYNYGILLLEMVTRR 236
D ++ G ++ E++T R
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 110 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 160
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---- 220
N+ ++ D I DF LAR + GY A + E+ N
Sbjct: 161 NLAVNEDCELKILDFGLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYN 207
Query: 221 ---DAYNYGILLLEMVTRR 236
D ++ G ++ E++T R
Sbjct: 208 QTVDIWSVGCIMAELLTGR 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
I + V+ + YL + +H D NVLL +A I DF L++ + N +
Sbjct: 113 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLN--LH 250
+ ++G + + + A + + S+ D +++G+L+ E + +KP M ++ L
Sbjct: 170 AQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
Query: 251 NFARMAFP 258
RM P
Sbjct: 229 KGERMGCP 236
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 104 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 154
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---- 220
N+ ++ D I DF LAR + GY A + E+ N
Sbjct: 155 NLAVNEDCELKILDFYLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 221 ---DAYNYGILLLEMVTRR 236
D ++ G ++ E++T R
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 104 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 154
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---- 220
N+ ++ D I DF LAR + GY A + E+ N
Sbjct: 155 NLAVNEDCELKILDFGLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYN 201
Query: 221 ---DAYNYGILLLEMVTRR 236
D ++ G ++ E++T R
Sbjct: 202 QTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 124 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 174
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---- 220
N+ ++ D I DF LAR + GY A + E+ N
Sbjct: 175 NLAVNEDCELKILDFGLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYN 221
Query: 221 ---DAYNYGILLLEMVTRR 236
D ++ G ++ E++T R
Sbjct: 222 QTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 123 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 173
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---- 220
N+ ++ D I DF LAR + GY A + E+ N
Sbjct: 174 NLAVNEDCELKILDFGLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYN 220
Query: 221 ---DAYNYGILLLEMVTRR 236
D ++ G ++ E++T R
Sbjct: 221 QTVDIWSVGCIMAELLTGR 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 29/139 (20%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 114 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 164
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---- 220
N+ ++ D I DF LAR + GY A + E+ N
Sbjct: 165 NLAVNEDCELKILDFGLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYN 211
Query: 221 ---DAYNYGILLLEMVTRR 236
D ++ G ++ E++T R
Sbjct: 212 QTVDIWSVGCIMAELLTGR 230
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 152 CQEL----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
CQ L ++H D K N+ L+ DL IGDF LA T+ +G R+ +
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGT 178
Query: 208 LDYDLGSEVSTNG-----DAYNYGILLLEMVTRRKPID 240
+Y +S G D ++ G ++ ++ + P +
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + + H+
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ 108
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 109 NIVRCIGVSL 118
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 138 AIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197
A ++ SAL +LH + I++ D K NVLLD++ + DF + + + N
Sbjct: 130 AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---------EGICN 177
Query: 198 GVRRTIGYTALDYDLGSEV------STNGDAYNYGILLLEMVTRRKPIDFMFEGDL 247
GV DY + E+ D + G+LL EM+ P + E DL
Sbjct: 178 GVTTATFCGTPDY-IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 131 LVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIG--DFELARFR-QE 187
LVR A + LD LH + I+HCD KP N+LL + I DF + + Q
Sbjct: 201 LVR--KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255
Query: 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
V QS Y A + LG+ D ++ G +L E++T + EGD
Sbjct: 256 VYXXIQSRF--------YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 18/122 (14%)
Query: 126 ICHRNLVRFISIAI------DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF 179
+ +N FI I + V ++ Y+H+ ++ I H D KPSN+L+D + + DF
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 180 ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---DAYNYGILLLEMVTRR 236
+ + G R T + ++ +E S NG D ++ GI L M
Sbjct: 197 GESEYM------VDKKIKGSRGTYEFMPPEF-FSNESSYNGAKVDIWSLGICLYVMFYNV 249
Query: 237 KP 238
P
Sbjct: 250 VP 251
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 61 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 121 NIVRCIGVSL 130
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 147 YLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
YLH + ++H D K N+ L+ DL IGDF LA T+ +G R+ +
Sbjct: 154 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCG 201
Query: 207 ALDYDLGSEVSTNG-----DAYNYGILLLEMVTRRKPID 240
+Y +S G D ++ G ++ ++ + P +
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 147 YLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
YLH + ++H D K N+ L+ DL IGDF LA T+ +G R+ +
Sbjct: 156 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCG 203
Query: 207 ALDYDLGSEVSTNG-----DAYNYGILLLEMVTRRKPID 240
+Y +S G D ++ G ++ ++ + P +
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
AL++LH + ++H D K N+LL D + DF F +++ P QS + + T
Sbjct: 129 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF---GFCAQIT-PEQSKRSXMVGTP 181
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
+ A + D ++ GI+ +EM+ P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 19/102 (18%)
Query: 139 IDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198
+ + AL ++H ILH D K N+ L D +GDF +AR S+
Sbjct: 132 VQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARV-------LNSTVEL 181
Query: 199 VRRTIGYTALDYDLGSEVSTN------GDAYNYGILLLEMVT 234
R IG Y L E+ N D + G +L E+ T
Sbjct: 182 ARACIG---TPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI-DXXK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI-DXXK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 18/110 (16%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
+ + + AL YL + ++H D KPSN+LLD + DF ++ + V + + S
Sbjct: 129 MTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS--GRLVDDKAKDRS 184
Query: 197 NGVRRTIG--------YTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
G + T DYD+ D ++ GI L+E+ T + P
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDI------RADVWSLGISLVELATGQFP 228
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLL 168
I V LDYLH C+ I+H D KP N+LL
Sbjct: 151 IIQQVLQGLDYLHTKCR--IIHTDIKPENILL 180
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ +DY+H + +++ D KPSN+ L + IGDF L + ++ + S G
Sbjct: 131 ITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK--NDGKRXRSKGTL 185
Query: 201 RTIGYTAL-DYDLGSEVSTNGDAYNYGILLLEMV 233
R + + D G EV D Y G++L E++
Sbjct: 186 RYMSPEQISSQDYGKEV----DLYALGLILAELL 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
AL++LH + ++H D K N+LL D + DF F +++ P QS + + T
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF---GFCAQIT-PEQSKRSXMVGTP 180
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
+ A + D ++ GI+ +EM+ P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
AL++LH + ++H D K N+LL D + DF F +++ P QS + + T
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF---GFCAQIT-PEQSKRSTMVGTP 180
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
+ A + D ++ GI+ +EM+ P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
I + V+ + YL + +H D NVLL +A I DF L++ + N ++
Sbjct: 114 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLN--LHN 251
++G + + + A + + S+ D +++G+L+ E + +KP M ++ L
Sbjct: 171 QTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
Query: 252 FARMAFP 258
RM P
Sbjct: 230 GERMGCP 236
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 50/218 (22%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I DF LAR T G
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDEMTGX 182
Query: 200 RRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRR 236
T Y A + L + D ++ G ++ E++T R
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 135 NIVRCIGVSL 144
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIXK 191
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
I + V+ + YL + +H D NVLL +A I DF L++ + N +
Sbjct: 119 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLN--LH 250
+ ++G + + + A + + S+ D +++G+L+ E + +KP M ++ L
Sbjct: 176 AQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
Query: 251 NFARMAFP 258
RM P
Sbjct: 235 KGERMGCP 242
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 41 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 100
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 101 NIVRCIGVSL 110
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 128 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 184
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 185 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 242
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 243 SDVWSFGVVLWEIAT 257
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLL 168
SI V LDYLH C+ I+H D KP N+L+
Sbjct: 144 SIIRQVLQGLDYLHSKCK--IIHTDIKPENILM 174
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLL 168
I V LDYLH C+ I+H D KP N+LL
Sbjct: 135 IIQQVLQGLDYLHTKCR--IIHTDIKPENILL 164
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
I + V+ + YL + +H D NVLL +A I DF L++ + N ++
Sbjct: 108 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLN--LHN 251
++G + + + A + + S+ D +++G+L+ E + +KP M ++ L
Sbjct: 165 QTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 223
Query: 252 FARMAFP 258
RM P
Sbjct: 224 GERMGCP 230
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 51 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 110
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 111 NIVRCIGVSL 120
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 95 NIVRCIGVSL 104
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 52 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 111
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 112 NIVRCIGVSL 121
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 36/142 (25%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQGAS-KSFMAECKALKNICHRNL 131
+ L+ IG G+F V L VAIK++ Q S + E + +K + H N+
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 132 VRFISIA---------IDVASA---LDYLHHHC----------------------QELIL 157
V+ + ++ AS DYL H Q+ I+
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 158 HCDPKPSNVLLDNDLFAHIGDF 179
H D K N+LLD D+ I DF
Sbjct: 137 HRDLKAENLLLDADMNIKIADF 158
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 95 NIVRCIGVSL 104
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 93 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 149
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 150 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 207
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 208 SDVWSFGVVLWEIAT 222
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L + +++A VA+ + YL +H D N L+ L IGDF ++R ++
Sbjct: 133 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR---DIY 186
Query: 190 NPTQSSSNGVRRT---IGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRK 237
+ G RT I + + L + +T D +++G++L E+ T K
Sbjct: 187 STDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 80 IGVGSFDAVYQG-----VFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF 134
+G G+F V+ + + ++ +VA+K L + A + F E + L + H+++VRF
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 135 ISIAID---VASALDYLHH 150
+ + + +Y+ H
Sbjct: 86 FGVCTEGRPLLMVFEYMRH 104
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
AL++LH + ++H D K N+LL D + DF F +++ P QS + + T
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDF---GFCAQIT-PEQSKRSEMVGTP 180
Query: 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
+ A + D ++ GI+ +EM+ P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 142 TLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLA--RDIYK 196
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 197 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIXK 191
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 192 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I D+ LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 37/193 (19%)
Query: 55 LRNAIPKEYYESLLKATDGFP-LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGAS 113
LR A KE +L+ G P +I L + + VFDL + +G
Sbjct: 53 LREATLKEV--DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK------------KGEL 98
Query: 114 KSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173
++ E L R ++R + ++V AL L+ I+H D KP N+LLD+D+
Sbjct: 99 FDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMN 149
Query: 174 AHIGDFELA-------RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYG 226
+ DF + + R+ P+ + + ++ Y G EV D ++ G
Sbjct: 150 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY--GKEV----DMWSTG 203
Query: 227 ILLLEMVTRRKPI 239
+++ ++ P
Sbjct: 204 VIMYTLLAGSPPF 216
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L + +++A VA+ + YL +H D N L+ L IGDF ++R ++
Sbjct: 127 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR---DIY 180
Query: 190 NPTQSSSNGVRRT---IGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRK 237
+ G RT I + + L + +T D +++G++L E+ T K
Sbjct: 181 STDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 80 IGVGSFDAVYQG-----VFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF 134
+G G+F V+ + + ++ +VA+K L + A + F E + L + H+++VRF
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 135 ISIAID---VASALDYLHH 150
+ + + +Y+ H
Sbjct: 80 FGVCTEGRPLLMVFEYMRH 98
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 99 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 155
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 156 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 213
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 214 SDVWSFGVVLWEIAT 228
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
I + V+ + YL + +H D NVLL +A I DF L++ + N ++
Sbjct: 110 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLN--LHN 251
++G + + + A + + S+ D +++G+L+ E + +KP M ++ L
Sbjct: 167 QTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225
Query: 252 FARMAFP 258
RM P
Sbjct: 226 GERMGCP 232
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 97 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 153
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 154 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 211
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 212 SDVWSFGVVLWEIAT 226
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 77/210 (36%), Gaps = 48/210 (22%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL------------------SIQCQGAS 113
+ F + NL+G GSF VY+ VAIK++ I CQ
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 114 KSFMAECKALKN---------ICH--------RNLVRFIS------IAIDVASALDYLHH 150
S + ++ +CH +N V+ S + + + YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 151 HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDY 210
H ILH D SN+LL ++ I DF LA ++ P + + T Y + +
Sbjct: 131 HG---ILHRDLTLSNLLLTRNMNIKIADFGLA---TQLKMPHEKHYT-LCGTPNYISPEI 183
Query: 211 DLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
S D ++ G + ++ R P D
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 85/223 (38%), Gaps = 55/223 (24%)
Query: 60 PKEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGAS-KSFMA 118
PK+Y + LLK + L IG G F V L +VAIK++ G+
Sbjct: 2 PKDY-DELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT 57
Query: 119 ECKALKNICHRNLVRF---------ISIAID----------------------------V 141
E +ALKN+ H+++ + I + ++ +
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQI 117
Query: 142 ASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR 201
SA+ Y+H + H D KP N+L D + DF L + P + ++
Sbjct: 118 VSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLC------AKPKGNKDYHLQT 168
Query: 202 TIG---YTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPID 240
G Y A + G S + + D ++ GILL ++ P D
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 99 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 155
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 156 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 213
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 214 SDVWSFGVVLWEIAT 228
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
I + V+ + YL + +H D NVLL +A I DF L++ + N +
Sbjct: 127 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLN--LH 250
+ ++G + + + A + + S+ D +++G+L+ E + +KP M ++ L
Sbjct: 184 AQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
Query: 251 NFARMAFP 258
RM P
Sbjct: 243 KGERMGCP 250
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L + +++A VA+ + YL +H D N L+ L IGDF ++R ++
Sbjct: 156 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR---DIY 209
Query: 190 NPTQSSSNGVRRT---IGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRK 237
+ G RT I + + L + +T D +++G++L E+ T K
Sbjct: 210 STDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 80 IGVGSFDAVYQG-----VFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF 134
+G G+F V+ + + ++ +VA+K L + A + F E + L + H+++VRF
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 135 ISIAID---VASALDYLHH 150
+ + + +Y+ H
Sbjct: 109 FGVCTEGRPLLMVFEYMRH 127
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 125 NICHR---NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN---DLFAHIGD 178
I HR N V I V S + YLH H I+H D KP N+LL++ D I D
Sbjct: 126 EIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVD 182
Query: 179 FELA 182
F L+
Sbjct: 183 FGLS 186
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 104 VLSIQCQGASKSFMAECKALKNICHRN-------LVRFISIAIDVASALDYLHHHCQELI 156
V+ + G KS++ ++L+ N L I +A ++A + YL+ +
Sbjct: 97 VMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKF 150
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D N ++ +D IGDF + R E ++ + G+ + + A +
Sbjct: 151 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMAPESLKDGVF 208
Query: 217 STNGDAYNYGILLLEMVT 234
+T+ D +++G++L E+ +
Sbjct: 209 TTSSDMWSFGVVLWEITS 226
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 146 TLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA--RDIXK 200
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 117 MAECKALKNICHRNL----VRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL 172
MAE L +N I + V+ + YL + +H D NVLL
Sbjct: 450 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQH 506
Query: 173 FAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEM 232
+A I DF L++ + N ++ ++G + + + A + + S+ D +++G+L+ E
Sbjct: 507 YAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 565
Query: 233 VTR-RKPIDFMFEGDLN--LHNFARMAFP 258
+ +KP M ++ L RM P
Sbjct: 566 FSYGQKPYRGMKGSEVTAMLEKGERMGCP 594
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 108
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 109 NIVRCIGVSL 118
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 100 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 156
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 157 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 214
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 215 SDVWSFGVVLWEIAT 229
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 117 MAECKALKNICHRNL----VRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL 172
MAE L +N I + V+ + YL + +H D NVLL
Sbjct: 451 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQH 507
Query: 173 FAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEM 232
+A I DF L++ + N ++ ++G + + + A + + S+ D +++G+L+ E
Sbjct: 508 YAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 566
Query: 233 VTR-RKPIDFMFEGDLN--LHNFARMAFP 258
+ +KP M ++ L RM P
Sbjct: 567 FSYGQKPYRGMKGSEVTAMLEKGERMGCP 595
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 104 VLSIQCQGASKSFMAECKA-LKN---ICHRNLVRFISIAIDVASALDYLHHHCQELILHC 159
++ + +G KS++ + ++N + +L + I +A ++A + YL+ + +H
Sbjct: 106 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHR 162
Query: 160 DPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN 219
D N ++ D IGDF + R E ++ + G+ + + + + +T
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMSPESLKDGVFTTY 220
Query: 220 GDAYNYGILLLEMVT 234
D +++G++L E+ T
Sbjct: 221 SDVWSFGVVLWEIAT 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 191
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 94 NIVRCIGVSL 103
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 200
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 94 NIVRCIGVSL 103
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 137 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 191
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 192 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 37/193 (19%)
Query: 55 LRNAIPKEYYESLLKATDGFP-LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGAS 113
LR A KE +L+ G P +I L + + VFDL + +G
Sbjct: 66 LREATLKEV--DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK------------KGEL 111
Query: 114 KSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173
++ E L R ++R + ++V AL L+ I+H D KP N+LLD+D+
Sbjct: 112 FDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMN 162
Query: 174 AHIGDFELA-------RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYG 226
+ DF + + R+ P+ + + ++ Y G EV D ++ G
Sbjct: 163 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY--GKEV----DMWSTG 216
Query: 227 ILLLEMVTRRKPI 239
+++ ++ P
Sbjct: 217 VIMYTLLAGSPPF 229
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIXK 200
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIXK 200
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
I + V+ + YL + +H D NVLL +A I DF L++ + N +
Sbjct: 129 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLN--LH 250
+ ++G + + + A + + S+ D +++G+L+ E + +KP M ++ L
Sbjct: 186 AQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
Query: 251 NFARMAFP 258
RM P
Sbjct: 245 KGERMGCP 252
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
I + V+ + YL + +H D NVLL +A I DF L++ + N +
Sbjct: 129 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLN--LH 250
+ ++G + + + A + + S+ D +++G+L+ E + +KP M ++ L
Sbjct: 186 AQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
Query: 251 NFARMAFP 258
RM P
Sbjct: 245 KGERMGCP 252
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQCQGASK-SFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L C + F+ E + H+
Sbjct: 26 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 85
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 86 NIVRCIGVSL 95
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 29/139 (20%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C L + + V+F+ I L Y+H I+H D KPS
Sbjct: 100 LVTHLMGADLNNIVKCAKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 150
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNG---- 220
N+ ++ D I DF LAR + GY A + E+ N
Sbjct: 151 NLAVNEDCELKILDFGLARHTDD-------------EMTGYVATRWYRAPEIMLNWMHYN 197
Query: 221 ---DAYNYGILLLEMVTRR 236
D ++ G ++ E++T R
Sbjct: 198 QTVDIWSVGCIMAELLTGR 216
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 146 LVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDY-YK 201
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 202 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 205 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 260
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 261 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 104 VLSIQCQGASKSFMAECKALKNICHRN-------LVRFISIAIDVASALDYLHHHCQELI 156
V+ + G KS++ ++L+ N L I +A ++A + YL+ +
Sbjct: 98 VMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKF 151
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D N ++ +D IGDF + R E + + G+ + + A +
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY-YRKGGKGL-LPVRWMAPESLKDGVF 209
Query: 217 STNGDAYNYGILLLEMVT 234
+T+ D +++G++L E+ +
Sbjct: 210 TTSSDMWSFGVVLWEITS 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
+ A VA +++L +H D NVL+ + I DF LA R +S+
Sbjct: 175 LCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLA--RDIMSDSNYV 229
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
R + + A + + D ++YGILL E+ +
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND---LFAHIGDFELARF 184
+I + S + YLH H I+H D KP N+LL+N L I DF L+ F
Sbjct: 150 NIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 104 VLSIQCQGASKSFMAECKALKNICHRN-------LVRFISIAIDVASALDYLHHHCQELI 156
V+ + G KS++ ++L+ N L I +A ++A + YL+ +
Sbjct: 98 VMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKF 151
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D N ++ +D IGDF + R E ++ + G+ + + A +
Sbjct: 152 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGL-LPVRWMAPESLKDGVF 209
Query: 217 STNGDAYNYGILLLEMVT 234
+T+ D +++G++L E+ +
Sbjct: 210 TTSSDMWSFGVVLWEITS 227
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 191 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 245
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 138 AIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197
A ++ L+++H+ +++ D KP+N+LLD I D LA + S +S
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV 351
Query: 198 GVRRTIGYTALDY-DLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
G T GY A + G ++ D ++ G +L +++ P
Sbjct: 352 G---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 138 AIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197
A ++ L+++H+ +++ D KP+N+LLD I D LA + S +S
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV 351
Query: 198 GVRRTIGYTALDY-DLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
G T GY A + G ++ D ++ G +L +++ P
Sbjct: 352 G---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 NTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 189 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 243
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 244 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 148 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 203
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 204 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDY-YK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF 179
+ SA+ Y H Q+ I+H D K N+LLD D I DF
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADXNIKIADF 157
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 138 AIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197
A ++ L+++H+ +++ D KP+N+LLD I D LA + S +S
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV 351
Query: 198 GVRRTIGYTALDY-DLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
G T GY A + G ++ D ++ G +L +++ P
Sbjct: 352 G---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 138 AIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197
A ++ L+++H+ +++ D KP+N+LLD I D LA + S +S
Sbjct: 297 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV 350
Query: 198 GVRRTIGYTALDY-DLGSEVSTNGDAYNYGILLLEMVTRRKPI 239
G T GY A + G ++ D ++ G +L +++ P
Sbjct: 351 G---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 200
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 201 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 151 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 206
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 207 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 31/94 (32%)
Query: 128 HRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187
H N + + DVASALD+LH+ + I H D KP N+L +
Sbjct: 107 HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCE------------------ 145
Query: 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGD 221
+P Q S + D+ LGS + NGD
Sbjct: 146 --HPNQVSPVKI--------CDFGLGSGIKLNGD 169
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 16/81 (19%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203
L Y+H I+H D KPSNV ++ D I DF LAR E
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE-------------EMT 186
Query: 204 GYTALDYDLGSEVSTNGDAYN 224
GY A + E+ N YN
Sbjct: 187 GYVATRWYRAPEIMLNWMHYN 207
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 135 ISIAIDVASALDYLH-----HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
+ +A+ A L +LH + I H D K NVL+ ++L I D LA + S
Sbjct: 108 LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
Query: 190 NPTQSSSN---GVRRTIGYTALDYDLGS---EVSTNGDAYNYGILLLEMVTRRKPIDFMF 243
+ +N G +R + LD + + E D + +G++L E + RR ++ +
Sbjct: 168 DYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWE-IARRTIVNGIV 226
Query: 244 E 244
E
Sbjct: 227 E 227
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 183 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 237
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 238 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 24/126 (19%)
Query: 55 LRNAIPKEYYESLLKATDGFP-LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGAS 113
LR A KE +L+ G P +I L + + VFDL + +G
Sbjct: 66 LREATLKEV--DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMK------------KGEL 111
Query: 114 KSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173
++ E L R ++R + ++V AL L+ I+H D KP N+LLD+D+
Sbjct: 112 FDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMN 162
Query: 174 AHIGDF 179
+ DF
Sbjct: 163 IKLTDF 168
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 148 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 202
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 203 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 142 TLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 196
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 197 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 83/234 (35%), Gaps = 62/234 (26%)
Query: 54 TLRNAIPKEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGAS 113
++R + E+ L + + ++ +G G+F VY+ A+ A KV+ + +
Sbjct: 1 SMRKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL 60
Query: 114 KSFMAECKALKNICHRNLVRFISI-----------------AID---------------- 140
+ ++ E + L H +V+ + A+D
Sbjct: 61 EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ 120
Query: 141 -----VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195
+ AL++LH + I+H D K NVL+ + GD LA F N
Sbjct: 121 VVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLE-----GDIRLADFGVSAKN----- 167
Query: 196 SNGVRRTIGYTALDYDLGSEV-----------STNGDAYNYGILLLEMVTRRKP 238
+++ + Y + EV D ++ GI L+EM P
Sbjct: 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 134 FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193
+S +A ++YL + +H D NVL+ + I DF LAR + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-YK 214
Query: 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
++NG R + + A + + D +++G+L+ E+ T
Sbjct: 215 KTTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 198 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 252
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 253 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189
L I + VA +++L +H D N+LL I DF LA R
Sbjct: 196 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLA--RDIYK 250
Query: 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
+P R + + A + + D +++G+LL E+ +
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 23/103 (22%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ L Y+H I+H D KPSN+ ++ D I DF LAR +
Sbjct: 134 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDD------------- 177
Query: 201 RTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 136 SIAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
S + VA + +L +C +H D N+LL + I DF LAR ++ N +
Sbjct: 165 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR---DIKNDSNY 217
Query: 195 SSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
G R + + A + + D ++YGI L E+ +
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 124 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 174
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAY 223
N+ ++ D I DF LAR T G T Y A + L + D +
Sbjct: 175 NLAVNEDCELKILDFGLARH-------TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 224 NYGILLLEMVTRR 236
+ G ++ E++T R
Sbjct: 228 SVGCIMAELLTGR 240
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 147 YLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
YLH + ++H D K N+ L+ DL IGDF LA T+ +G R+
Sbjct: 132 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCG 179
Query: 207 ALDYDLGSEVSTNG-----DAYNYGILLLEMVTRRKPID 240
+Y +S G D ++ G ++ ++ + P +
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 100 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 150
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAY 223
N+ ++ D I DF LAR T G T Y A + L + D +
Sbjct: 151 NLAVNEDCELKILDFGLARH-------TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 224 NYGILLLEMVTRR 236
+ G ++ E++T R
Sbjct: 204 SVGCIMAELLTGR 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 136 SIAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
S + VA + +L +C +H D N+LL + I DF LAR ++ N +
Sbjct: 167 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR---DIKNDSNY 219
Query: 195 SSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
G R + + A + + D ++YGI L E+ +
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 147 YLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYT 206
YLH + ++H D K N+ L+ DL IGDF LA T+ +G R+
Sbjct: 136 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCG 183
Query: 207 ALDYDLGSEVSTNG-----DAYNYGILLLEMVTRRKPID 240
+Y +S G D ++ G ++ ++ + P +
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 104 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 154
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAY 223
N+ ++ D I DF LAR T G T Y A + L + D +
Sbjct: 155 NLAVNEDCELKILDFGLARH-------TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 224 NYGILLLEMVTRR 236
+ G ++ E++T R
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 18/98 (18%)
Query: 152 CQEL----ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTA 207
CQ L ++H D K N+ L+ DL IGDF LA T+ +G R+
Sbjct: 130 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCGT 180
Query: 208 LDYDLGSEVSTNG-----DAYNYGILLLEMVTRRKPID 240
+Y +S G D ++ G ++ ++ + P +
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 105 LSIQCQGASKSFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPS 164
L GA + + +C+ L + + V+F+ I L Y+H I+H D KPS
Sbjct: 104 LVTHLMGADLNNIVKCQKLTD----DHVQFLIYQI--LRGLKYIH---SADIIHRDLKPS 154
Query: 165 NVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAY 223
N+ ++ D I DF LAR T G T Y A + L + D +
Sbjct: 155 NLAVNEDCELKILDFGLARH-------TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 224 NYGILLLEMVTRR 236
+ G ++ E++T R
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195
S + VA + +L + +H D N+LL + I DF LAR ++ N +
Sbjct: 149 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR---DIKNDSNYV 202
Query: 196 SNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
G R + + A + + D ++YGI L E+ +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 136 SIAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194
S + VA + +L +C +H D N+LL + I DF LAR ++ N +
Sbjct: 172 SFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR---DIKNDSNY 224
Query: 195 SSNG-VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
G R + + A + + D ++YGI L E+ +
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195
S + VA + +L + +H D N+LL + I DF LAR + SN
Sbjct: 172 SFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN--YVV 226
Query: 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT 234
R + + A + + D ++YGI L E+ +
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 70/199 (35%), Gaps = 54/199 (27%)
Query: 80 IGVGSFDAVYQGVFDLNRAVVAIKVL--SIQCQGASKSFMAECKALKNICHRNLVRFISI 137
+G G++ AV V A VAIK L Q + +K E + LK++ H N++ + +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 138 -----------------------------------------AIDVASALDYLHHHCQELI 156
+ L Y+H I
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---I 149
Query: 157 LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV 216
+H D KP N+ ++ D I DF LAR S G T Y A + L
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLAR-------QADSEMXGXVVTRWYRAPEVILNWMR 202
Query: 217 STNG-DAYNYGILLLEMVT 234
T D ++ G ++ EM+T
Sbjct: 203 YTQTVDIWSVGCIMAEMIT 221
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 23/103 (22%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ L Y+H I+H D KPSN+ ++ D I DF LAR +
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------- 177
Query: 201 RTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFEL-ARFRQEVSNPTQSSSNGV 199
V AL YLH ++H D K ++LL D + DF A+ ++V P + G
Sbjct: 150 VLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKXLVG- 203
Query: 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238
T + A + S +T D ++ GI+++EMV P
Sbjct: 204 --TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 134 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 191 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 239
Query: 255 MA 256
+A
Sbjct: 240 IA 241
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLV 132
F L+ L+G G++ VY+G + AIKV+ + + E LK HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIA 84
Query: 133 RF 134
+
Sbjct: 85 TY 86
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 135 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 192 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 240
Query: 255 MA 256
+A
Sbjct: 241 IA 242
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 115 SFMAECKALKNICHRNLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN 170
S +A + K+ R R + DVA+ALD+LH + I H D KP N+L ++
Sbjct: 97 SILAHIQKQKHFNEREASRVVR---DVAAALDFLH---TKGIAHRDLKPENILCES 146
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 154 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 211 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEPF---FYGHDNHDQLVK 259
Query: 255 MA 256
+A
Sbjct: 260 IA 261
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 133 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 190 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 238
Query: 255 MA 256
+A
Sbjct: 239 IA 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 130 NLVRFISIAIDVASALDYLH-----HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184
+ V + I + +AS L +LH + I H D K N+L+ + I D LA
Sbjct: 103 DTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162
Query: 185 RQEVSNPTQSSSN---GVRRTIGYTALDYDLGSEV---STNGDAYNYGILLLEMVTR 235
+ +N +N G +R + LD + + D + +G++L E+ R
Sbjct: 163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 134 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 191 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 239
Query: 255 MA 256
+A
Sbjct: 240 IA 241
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 133 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 190 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 238
Query: 255 MA 256
+A
Sbjct: 239 IA 240
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 133 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 190 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 238
Query: 255 MA 256
+A
Sbjct: 239 IA 240
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 130 NLVRFISIAIDVASALDYLH-----HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184
+ V + I + +AS L +LH + I H D K N+L+ + I D LA
Sbjct: 103 DTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162
Query: 185 RQEVSNPTQSSSN---GVRRTIGYTALDYDLGSEV---STNGDAYNYGILLLEMVTR 235
+ +N +N G +R + LD + + D + +G++L E+ R
Sbjct: 163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 14/133 (10%)
Query: 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196
IAID L Y+H D KP N+L+D + + DF E S +
Sbjct: 186 IAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 197 NGVRRTIGYTALDYDLGSE--VSTNGDAYNYGILLLEMVTRRKPI--DFMFEGDLNLHNF 252
G I L G + D ++ G+ + EM+ P + + E + N
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 253 -ARMAFPNRVMDI 264
R FP +V D+
Sbjct: 297 KERFQFPTQVTDV 309
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 133 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 190 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 238
Query: 255 MA 256
+A
Sbjct: 239 IA 240
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Query: 130 NLVRFISIAIDVASALDYLH-----HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184
+ V + I + +AS L +LH + I H D K N+L+ + I D LA
Sbjct: 132 DTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 191
Query: 185 RQEVSNPTQSSSN---GVRRTIGYTALDYDLGSEVSTN---GDAYNYGILLLEMVTR 235
+ +N +N G +R + LD + + + D + +G++L E+ R
Sbjct: 192 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 133 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 190 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 238
Query: 255 MA 256
+A
Sbjct: 239 IA 240
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I F LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 50/203 (24%)
Query: 79 LIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVR----- 133
++G G++ VY G N+ +AIK + + S+ E K++ H+N+V+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 134 ----FISIAID-------------------------------VASALDYLHHHCQELILH 158
FI I ++ + L YLH + I+H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145
Query: 159 CDPKPSNVLLDN-DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD-YDLGSE- 215
D K NVL++ I DF ++ R NP + G T+ Y A + D G
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSK-RLAGINPCTETFTG---TLQYMAPEIIDKGPRG 201
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
D ++ G ++EM T + P
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPP 224
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 140 DVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA-HIGDFELARF----RQEVSNPTQS 194
++ ALDY H + I+H D KP NV++D++L + D+ LA F ++
Sbjct: 133 ELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254
G + DY L D ++ G + M+ R++P F G N +
Sbjct: 190 YFKGPELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFYGHDNHDQLVK 238
Query: 255 MA 256
+A
Sbjct: 239 IA 240
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 49/163 (30%)
Query: 63 YYESLLKATDGFPLINLIGVGSFDAVY---QGVFDLNRAVVAIKVLSIQCQGASKSFMAE 119
Y++ L +D + + +G G++ V + RA+ IK S+ S + + E
Sbjct: 15 YFQGL---SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDE 71
Query: 120 CKALKNICHRNLVRFISIAID-------------------------------------VA 142
LK + H N+++ D V
Sbjct: 72 VAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVL 131
Query: 143 SALDYLHHHCQELILHCDPKPSNVLLDN---DLFAHIGDFELA 182
S YLH H I+H D KP N+LL++ D I DF L+
Sbjct: 132 SGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR-- 201
+ YLH++ ++H D K N+ L++D+ IGDF LA T+ +G R+
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA---------TKIEFDGERKKT 201
Query: 202 ---TIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
T Y A + S D ++ G +L ++ + P +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR-- 201
+ YLH++ ++H D K N+ L++D+ IGDF LA T+ +G R+
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA---------TKIEFDGERKKX 201
Query: 202 ---TIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
T Y A + S D ++ G +L ++ + P +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 76 LINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLS-IQCQGASKSFMAECKALKNICHR 129
LI +G G+F VY+G D + VA+K L + + F+ E + H+
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 130 NLVRFISIAI 139
N+VR I +++
Sbjct: 109 NIVRCIGVSL 118
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR-- 201
+ YLH++ ++H D K N+ L++D+ IGDF LA T+ +G R+
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA---------TKIEFDGERKKD 201
Query: 202 ---TIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
T Y A + S D ++ G +L ++ + P +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 143 SALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRR- 201
+ YLH++ ++H D K N+ L++D+ IGDF LA T+ +G R+
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA---------TKIEFDGERKK 184
Query: 202 ----TIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240
T Y A + S D ++ G +L ++ + P +
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 50/203 (24%)
Query: 79 LIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVR----- 133
++G G++ VY G N+ +AIK + + S+ E K++ H+N+V+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 134 ----FISIAID-------------------------------VASALDYLHHHCQELILH 158
FI I ++ + L YLH + I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 131
Query: 159 CDPKPSNVLLDN-DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD-YDLGSE- 215
D K NVL++ I DF ++ R NP + G T+ Y A + D G
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSK-RLAGINPCTETFTG---TLQYMAPEIIDKGPRG 187
Query: 216 VSTNGDAYNYGILLLEMVTRRKP 238
D ++ G ++EM T + P
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPP 210
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I D LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183
I+H D KP+N LL+ D I DF LAR
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 46/156 (29%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNL 131
+ ++ ++G GSF V + + + A+KV++ + + + E + LK + H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 132 VRFISIAID-------------------------------------VASALDYLHHHCQE 154
++ I D V S + Y+H H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 155 LILHCDPKPSNVLLDN---DLFAHIGDFELAR-FRQ 186
I+H D KP N+LL++ D I DF L+ F+Q
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIG---YTALDYDLGS 214
H D KP N+L+ D FA++ DF +A S T + T+G Y A + S
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA------SATTDEKLTQLGNTVGTLYYXAPERFSES 210
Query: 215 EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246
+ D Y +L E +T P ++GD
Sbjct: 211 HATYRADIYALTCVLYECLTGSPP----YQGD 238
>pdb|3TYK|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(4)-Ia
Length = 362
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 122 ALKNICHRNLVRFISIAIDVASALDYLH---HHCQEL--ILHCDPKPSNVLLDNDLFAHI 176
A ++ H V +++ VA ALD L C E+ ++H D +NVL DN +
Sbjct: 176 ADPHVYHWQTVXDDTVSASVAQALDELXLWAEDCPEVRHLVHADFGSNNVLTDNGRITAV 235
Query: 177 GDFELARF---RQEVSN 190
D+ A F + EV+N
Sbjct: 236 IDWSEAXFGDSQYEVAN 252
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 46/155 (29%)
Query: 71 TDGFPLINLIGVGSFDAVY---QGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC 127
+D + + +G G++ V + RA+ IK S+ S + + E LK +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 128 HRNLVRFISIAID-------------------------------------VASALDYLHH 150
H N+++ D V S YLH
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 151 HCQELILHCDPKPSNVLLDN---DLFAHIGDFELA 182
H I+H D KP N+LL++ D I DF L+
Sbjct: 123 HN---IVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I D LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY---NNRERLLNKMCGTLPYVAPELLKRR 182
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 62/224 (27%)
Query: 61 KEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAV-VAIKVLSIQCQGA--SKSFM 117
+E +++ + + + ++ +G G++ +V FD + VA+K LS Q +K
Sbjct: 11 QELNKTIWEVPERYQNLSPVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTY 69
Query: 118 AECKALKNICHRNLVRFISIAIDVASALD----YLHHH-----------CQEL------- 155
E + LK++ H N++ + + S + YL H CQ+L
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 156 ----------------ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199
I+H D KPSN+ ++ D I D LAR +
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD------------ 177
Query: 200 RRTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 -EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY---NNRERLLNKMCGTLPYVAPELLKRR 182
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY---NNRERLLNKMCGTLPYVAPELLKRR 182
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY---NNRERLLNKMCGTLPYVAPELLKRR 182
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY---NNRERLLNKMCGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 75/207 (36%), Gaps = 40/207 (19%)
Query: 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHR 129
+ + L+ +G G++ V V + VA+K++ ++ ++ E K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 130 NLVRFIS---------------------------IAIDVASALDYLHHHCQEL------- 155
N+V+F I + A + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183
I+H D KP+N LL+ D + DF LAR
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 45/156 (28%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNL 131
+ ++ ++G GSF V + + + A+KV++ + + + E + LK + H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 132 VRFISIAID-------------------------------------VASALDYLHHHCQE 154
++ I D V S + Y+H H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 155 LILHCDPKPSNVLLDN---DLFAHIGDFELARFRQE 187
I+H D KP N+LL++ D I DF L+ Q+
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR-FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS 214
I H D KP N+LLD I DF LA FR N + N + T+ Y A +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFR---YNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 215 EVSTNG-DAYNYGILLLEMVTRRKPID 240
E D ++ GI+L M+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 45/156 (28%)
Query: 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNL 131
+ ++ ++G GSF V + + + A+KV++ + + + E + LK + H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 132 VRFISIAID-------------------------------------VASALDYLHHHCQE 154
++ I D V S + Y+H H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 155 LILHCDPKPSNVLLDN---DLFAHIGDFELARFRQE 187
I+H D KP N+LL++ D I DF L+ Q+
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 66 SLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLS------IQCQGASKSFMAE 119
SLL+ + L IG GS+ V + + RA+ AIK+++ I + + E
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER-IKTE 78
Query: 120 CKALKNICHRNLVRFISIAID 140
+ +K + H N+ R + D
Sbjct: 79 VRLMKKLHHPNIARLYEVYED 99
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL---SIQCQGASKSFMAECKALKNICH 128
D F + +G G F VY + +VA+KVL I+ +G E + ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 129 RNLVRFISIAID 140
N++R + D
Sbjct: 83 PNILRLYNYFYD 94
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 144 ALDYLHHHCQELILHCDPKPSNVLLDND-LFAHIGDFELARFRQEVS-NPTQSSSNGVRR 201
L+YLH ILH D K NVLL +D A + DF A Q + + + +
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 202 TIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNL 249
T + A + LG D ++ ++L M+ P F G L L
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 301
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 23/103 (22%)
Query: 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200
+ L Y+H I+H D KPSN+ ++ D I DF L R +
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD------------- 177
Query: 201 RTIGYTALDYDLGSEVSTNG-------DAYNYGILLLEMVTRR 236
GY A + E+ N D ++ G ++ E++T R
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 23/113 (20%)
Query: 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLL----DNDLFAHIGDFELAR-FRQEVSN 190
++ + ++YLH + ++H D KPSN+L N I DF A+ R E
Sbjct: 120 AVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE--- 173
Query: 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNG-----DAYNYGILLLEMVTRRKP 238
NG+ T YTA ++ + G D ++ G+LL M+T P
Sbjct: 174 ------NGLLMTPCYTA-NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 139 IDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173
I++ AL+YL + + H D KP N+LLD+ F
Sbjct: 144 IEILKALNYLR---KMSLTHTDLKPENILLDDPYF 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,479,890
Number of Sequences: 62578
Number of extensions: 354638
Number of successful extensions: 2224
Number of sequences better than 100.0: 794
Number of HSP's better than 100.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 519
Number of HSP's that attempted gapping in prelim test: 1553
Number of HSP's gapped (non-prelim): 1048
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)