Query 039228
Match_columns 356
No_of_seqs 370 out of 2679
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 07:36:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039228.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039228hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 2.8E-45 6.1E-50 343.3 20.7 250 58-330 61-355 (361)
2 KOG0593 Predicted protein kina 100.0 1.1E-43 2.3E-48 308.9 16.7 239 72-322 2-283 (396)
3 KOG0591 NIMA (never in mitosis 100.0 6.1E-44 1.3E-48 307.6 13.4 221 71-326 18-284 (375)
4 KOG0192 Tyrosine kinase specif 100.0 4.4E-43 9.6E-48 326.6 19.0 225 72-334 41-310 (362)
5 KOG0575 Polo-like serine/threo 100.0 4.9E-43 1.1E-47 330.2 16.3 212 72-323 18-269 (592)
6 KOG0581 Mitogen-activated prot 100.0 4E-43 8.7E-48 314.0 14.4 216 72-323 79-335 (364)
7 KOG0615 Serine/threonine prote 100.0 1.3E-43 2.8E-48 319.7 10.2 216 71-322 171-436 (475)
8 KOG0598 Ribosomal protein S6 k 100.0 8.1E-42 1.8E-46 305.5 13.9 164 71-241 24-227 (357)
9 KOG0193 Serine/threonine prote 100.0 1.2E-41 2.5E-46 319.9 12.7 233 63-331 383-657 (678)
10 KOG0600 Cdc2-related protein k 100.0 6E-41 1.3E-45 309.3 16.0 241 71-323 116-400 (560)
11 KOG0592 3-phosphoinositide-dep 100.0 3.6E-41 7.9E-46 313.1 14.2 243 68-352 69-361 (604)
12 KOG0659 Cdk activating kinase 100.0 1.7E-40 3.6E-45 284.3 16.4 240 72-323 2-281 (318)
13 KOG0197 Tyrosine kinases [Sign 100.0 2.6E-41 5.6E-46 315.2 12.5 220 72-331 206-465 (468)
14 KOG0582 Ste20-like serine/thre 100.0 2.3E-40 4.9E-45 301.4 16.5 228 70-323 24-293 (516)
15 KOG0595 Serine/threonine-prote 100.0 7.7E-41 1.7E-45 301.9 13.3 164 70-241 8-216 (429)
16 KOG0661 MAPK related serine/th 100.0 5.7E-41 1.2E-45 307.5 10.9 236 71-323 9-291 (538)
17 KOG0198 MEKK and related serin 100.0 1.6E-40 3.4E-45 301.1 12.3 226 71-330 16-283 (313)
18 KOG0597 Serine-threonine prote 100.0 6.3E-40 1.4E-44 305.6 14.7 212 72-323 2-251 (808)
19 KOG0578 p21-activated serine/t 100.0 4.9E-39 1.1E-43 300.9 16.6 215 72-323 273-523 (550)
20 KOG0660 Mitogen-activated prot 100.0 2.3E-39 5E-44 288.8 13.1 243 70-323 20-310 (359)
21 KOG0201 Serine/threonine prote 100.0 2.6E-39 5.6E-44 294.2 13.0 213 72-323 13-263 (467)
22 KOG0663 Protein kinase PITSLRE 100.0 5.1E-39 1.1E-43 283.1 13.8 242 71-323 75-361 (419)
23 KOG0585 Ca2+/calmodulin-depend 100.0 5.2E-39 1.1E-43 294.4 13.9 223 68-324 93-373 (576)
24 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.2E-38 2.6E-43 298.6 16.1 224 70-329 5-336 (338)
25 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.7E-38 3.8E-43 297.1 16.9 233 73-323 1-290 (338)
26 cd05108 PTKc_EGFR Catalytic do 100.0 2.5E-38 5.5E-43 293.8 17.8 226 71-333 6-274 (316)
27 cd07848 STKc_CDKL5 Catalytic d 100.0 8.7E-38 1.9E-42 285.8 20.3 240 72-322 1-283 (287)
28 KOG0583 Serine/threonine prote 100.0 6.7E-38 1.5E-42 294.2 17.0 219 69-328 14-279 (370)
29 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.3E-38 1.8E-42 288.5 17.1 241 71-322 4-287 (303)
30 KOG2345 Serine/threonine prote 100.0 1.3E-38 2.7E-43 270.3 10.5 228 70-327 19-300 (302)
31 PHA03212 serine/threonine kina 100.0 9.2E-38 2E-42 298.0 17.7 234 71-322 91-375 (391)
32 KOG0658 Glycogen synthase kina 100.0 6.6E-38 1.4E-42 279.9 15.0 233 73-322 25-305 (364)
33 KOG0694 Serine/threonine prote 100.0 1.1E-37 2.3E-42 297.5 15.9 210 68-317 364-613 (694)
34 KOG1035 eIF-2alpha kinase GCN2 100.0 2.8E-38 6E-43 316.4 12.4 221 68-322 475-870 (1351)
35 cd05612 STKc_PRKX_like Catalyt 100.0 2.3E-37 5.1E-42 284.0 17.3 209 72-323 1-254 (291)
36 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.8E-37 8.3E-42 289.1 19.0 243 69-323 12-298 (343)
37 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.8E-37 3.9E-42 284.3 15.7 242 71-322 4-284 (288)
38 KOG0594 Protein kinase PCTAIRE 100.0 9.3E-38 2E-42 279.0 13.2 244 73-328 12-309 (323)
39 KOG0616 cAMP-dependent protein 100.0 4.6E-38 1E-42 273.1 10.9 161 71-241 43-243 (355)
40 cd07862 STKc_CDK6 Catalytic do 100.0 3.8E-37 8.3E-42 282.0 17.2 231 72-322 1-286 (290)
41 cd07876 STKc_JNK2 Catalytic do 100.0 3.2E-37 7E-42 291.4 17.2 165 70-242 19-225 (359)
42 KOG0580 Serine/threonine prote 100.0 9.4E-38 2E-42 263.8 11.8 212 70-323 20-273 (281)
43 cd07874 STKc_JNK3 Catalytic do 100.0 4.8E-37 1E-41 289.8 18.0 164 70-241 15-220 (355)
44 cd05631 STKc_GRK4 Catalytic do 100.0 2.5E-37 5.4E-42 282.9 15.4 213 73-322 1-260 (285)
45 cd05096 PTKc_DDR1 Catalytic do 100.0 3.8E-37 8.2E-42 284.2 16.1 226 71-326 4-304 (304)
46 KOG0605 NDR and related serine 100.0 1.1E-37 2.5E-42 289.9 12.4 169 70-241 139-390 (550)
47 cd05052 PTKc_Abl Catalytic dom 100.0 1E-36 2.3E-41 275.3 18.5 217 72-327 6-262 (263)
48 PLN00034 mitogen-activated pro 100.0 4.5E-37 9.8E-42 289.8 16.7 217 71-323 73-328 (353)
49 KOG4279 Serine/threonine prote 100.0 8.1E-38 1.7E-42 297.1 11.2 208 79-323 582-832 (1226)
50 cd07875 STKc_JNK1 Catalytic do 100.0 8.4E-37 1.8E-41 289.1 17.7 165 70-242 22-228 (364)
51 cd05104 PTKc_Kit Catalytic dom 100.0 7.1E-37 1.5E-41 290.7 17.2 221 71-327 34-374 (375)
52 cd05048 PTKc_Ror Catalytic Dom 100.0 7.1E-37 1.5E-41 279.1 16.4 219 72-327 5-283 (283)
53 cd05106 PTKc_CSF-1R Catalytic 100.0 5E-37 1.1E-41 291.6 15.7 222 71-328 37-373 (374)
54 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-36 4.6E-41 282.7 19.6 162 71-241 4-204 (331)
55 PHA02988 hypothetical protein; 100.0 9.2E-37 2E-41 279.1 16.7 208 78-328 26-280 (283)
56 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-36 2.6E-41 288.9 18.1 238 73-323 1-288 (372)
57 PTZ00263 protein kinase A cata 100.0 4.7E-37 1E-41 286.9 14.9 210 71-323 17-271 (329)
58 cd05571 STKc_PKB Catalytic dom 100.0 5.3E-37 1.1E-41 285.9 15.0 205 78-322 1-250 (323)
59 cd05111 PTK_HER3 Pseudokinase 100.0 2.3E-36 5.1E-41 275.6 18.6 223 72-331 7-272 (279)
60 cd08228 STKc_Nek6 Catalytic do 100.0 2.1E-36 4.6E-41 273.5 18.0 221 72-328 2-266 (267)
61 PTZ00036 glycogen synthase kin 100.0 6.3E-37 1.4E-41 296.6 15.4 235 70-323 64-351 (440)
62 PTZ00283 serine/threonine prot 100.0 8.4E-37 1.8E-41 299.4 16.0 218 69-323 29-297 (496)
63 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.3E-36 2.8E-41 277.6 16.2 233 74-328 6-282 (283)
64 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.4E-36 3E-41 275.1 16.2 218 72-327 5-265 (266)
65 cd07863 STKc_CDK4 Catalytic do 100.0 2E-36 4.4E-41 276.8 17.4 236 73-322 1-284 (288)
66 cd05110 PTKc_HER4 Catalytic do 100.0 2.6E-36 5.6E-41 278.7 18.1 242 71-349 6-290 (303)
67 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.7E-37 1.2E-41 286.8 13.9 217 72-323 1-257 (333)
68 KOG4721 Serine/threonine prote 100.0 4.9E-38 1.1E-42 293.1 6.5 219 67-333 119-374 (904)
69 KOG0033 Ca2+/calmodulin-depend 100.0 5.5E-38 1.2E-42 266.0 5.9 215 70-321 9-265 (355)
70 cd05054 PTKc_VEGFR Catalytic d 100.0 1.7E-36 3.7E-41 284.1 16.7 224 70-329 5-335 (337)
71 cd05093 PTKc_TrkB Catalytic do 100.0 2.4E-36 5.1E-41 276.8 17.1 223 72-331 5-283 (288)
72 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-36 3.3E-41 273.5 15.4 218 70-327 4-261 (261)
73 cd05109 PTKc_HER2 Catalytic do 100.0 2.7E-36 5.9E-41 274.9 17.0 223 71-330 6-271 (279)
74 cd05585 STKc_YPK1_like Catalyt 100.0 1.5E-36 3.2E-41 281.5 15.4 201 80-320 1-241 (312)
75 KOG0588 Serine/threonine prote 100.0 5.9E-37 1.3E-41 290.7 12.4 213 71-324 11-264 (786)
76 cd05075 PTKc_Axl Catalytic dom 100.0 4E-36 8.6E-41 272.5 17.4 217 74-327 1-271 (272)
77 KOG1026 Nerve growth factor re 100.0 1.7E-37 3.8E-42 303.0 9.0 224 71-331 485-766 (774)
78 cd08229 STKc_Nek7 Catalytic do 100.0 6.3E-36 1.4E-40 270.4 18.5 221 72-328 2-266 (267)
79 cd05091 PTKc_Ror2 Catalytic do 100.0 1.8E-36 3.8E-41 276.6 14.9 218 72-326 5-282 (283)
80 cd05035 PTKc_Axl_like Catalyti 100.0 7.8E-36 1.7E-40 270.4 18.5 217 74-327 1-272 (273)
81 cd05072 PTKc_Lyn Catalytic dom 100.0 2.8E-36 6.1E-41 271.9 15.3 216 71-326 5-260 (261)
82 cd05049 PTKc_Trk Catalytic dom 100.0 4.9E-36 1.1E-40 273.0 17.1 218 71-325 4-279 (280)
83 cd05573 STKc_ROCK_NDR_like Cat 100.0 2E-36 4.4E-41 284.7 14.9 217 72-323 1-285 (350)
84 cd05593 STKc_PKB_gamma Catalyt 100.0 3.3E-36 7.2E-41 281.1 16.1 206 78-323 1-251 (328)
85 PHA02882 putative serine/threo 100.0 5E-36 1.1E-40 275.6 17.0 226 71-324 11-293 (294)
86 cd06619 PKc_MKK5 Catalytic dom 100.0 4.3E-36 9.3E-41 273.8 16.3 217 72-323 1-253 (279)
87 cd05595 STKc_PKB_beta Catalyti 100.0 2.6E-36 5.6E-41 281.2 15.1 205 78-322 1-250 (323)
88 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.3E-36 7.1E-41 275.0 15.4 235 71-327 3-283 (284)
89 KOG1095 Protein tyrosine kinas 100.0 1E-36 2.2E-41 307.3 12.9 223 72-331 692-965 (1025)
90 KOG1989 ARK protein kinase fam 100.0 3E-36 6.6E-41 295.3 15.8 224 71-330 36-314 (738)
91 cd05033 PTKc_EphR Catalytic do 100.0 8.3E-36 1.8E-40 269.7 17.6 220 71-327 3-265 (266)
92 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.5E-36 1.2E-40 277.2 16.7 238 72-322 6-285 (309)
93 cd05089 PTKc_Tie1 Catalytic do 100.0 8.9E-36 1.9E-40 274.2 17.7 224 72-335 2-283 (297)
94 cd05094 PTKc_TrkC Catalytic do 100.0 6.7E-36 1.4E-40 274.2 16.6 223 72-331 5-286 (291)
95 cd07868 STKc_CDK8 Catalytic do 100.0 1.9E-35 4.2E-40 274.3 19.5 160 77-242 6-219 (317)
96 cd05068 PTKc_Frk_like Catalyti 100.0 1E-35 2.2E-40 268.5 17.1 216 71-326 5-260 (261)
97 cd05589 STKc_PKN Catalytic dom 100.0 6E-36 1.3E-40 278.9 16.1 209 74-322 1-256 (324)
98 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.4E-35 5.2E-40 266.3 19.6 221 72-328 2-266 (267)
99 PTZ00267 NIMA-related protein 100.0 6.1E-36 1.3E-40 292.7 16.7 213 73-322 68-322 (478)
100 KOG0194 Protein tyrosine kinas 100.0 8.9E-37 1.9E-41 288.7 10.3 233 63-334 148-427 (474)
101 cd05062 PTKc_IGF-1R Catalytic 100.0 4.3E-36 9.4E-41 273.3 14.5 220 70-326 4-277 (277)
102 PTZ00284 protein kinase; Provi 100.0 1E-35 2.2E-40 290.8 17.9 163 68-241 125-347 (467)
103 cd06650 PKc_MEK1 Catalytic dom 100.0 1.7E-35 3.7E-40 276.9 18.7 162 71-241 4-204 (333)
104 cd05599 STKc_NDR_like Catalyti 100.0 4.9E-36 1.1E-40 283.8 15.1 167 72-241 1-241 (364)
105 cd05116 PTKc_Syk Catalytic dom 100.0 1.3E-35 2.7E-40 267.3 17.0 212 79-326 2-254 (257)
106 cd05071 PTKc_Src Catalytic dom 100.0 1.2E-35 2.6E-40 268.4 16.9 217 71-327 5-260 (262)
107 PRK13184 pknD serine/threonine 100.0 1E-35 2.2E-40 301.7 18.1 226 72-330 2-293 (932)
108 cd05060 PTKc_Syk_like Catalyti 100.0 1.5E-35 3.3E-40 266.7 17.4 215 78-328 1-256 (257)
109 PTZ00426 cAMP-dependent protei 100.0 4.6E-36 1E-40 281.4 14.5 210 71-323 29-284 (340)
110 cd05043 PTK_Ryk Pseudokinase d 100.0 9.9E-36 2.2E-40 271.3 16.2 223 71-330 5-279 (280)
111 cd05084 PTKc_Fes Catalytic dom 100.0 1E-35 2.2E-40 266.9 16.0 211 78-325 1-251 (252)
112 cd07849 STKc_ERK1_2_like Catal 100.0 1.8E-35 3.9E-40 277.0 18.2 248 71-328 4-299 (336)
113 PF00069 Pkinase: Protein kina 100.0 1.8E-35 3.9E-40 265.9 16.8 216 74-322 1-256 (260)
114 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-35 3.2E-40 266.6 16.2 213 72-324 4-255 (256)
115 cd05058 PTKc_Met_Ron Catalytic 100.0 2E-35 4.3E-40 266.4 16.9 217 78-329 1-261 (262)
116 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.6E-35 3.5E-40 266.9 16.3 217 70-326 4-259 (260)
117 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.3E-35 2.9E-40 267.5 15.7 216 71-326 5-259 (260)
118 cd05045 PTKc_RET Catalytic dom 100.0 2E-35 4.4E-40 270.8 17.1 220 73-329 1-288 (290)
119 cd05626 STKc_LATS2 Catalytic d 100.0 1.2E-35 2.6E-40 283.0 16.1 166 73-241 2-250 (381)
120 cd07839 STKc_CDK5 Catalytic do 100.0 3E-35 6.4E-40 268.6 18.0 240 73-322 1-280 (284)
121 cd05596 STKc_ROCK Catalytic do 100.0 6.1E-36 1.3E-40 283.8 13.8 220 69-323 40-304 (370)
122 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-35 3.3E-40 269.8 15.9 218 71-325 5-276 (277)
123 cd05090 PTKc_Ror1 Catalytic do 100.0 1.4E-35 3.1E-40 270.7 15.8 218 72-326 5-282 (283)
124 PF07714 Pkinase_Tyr: Protein 100.0 6.1E-36 1.3E-40 270.1 13.0 212 76-324 3-259 (259)
125 cd05628 STKc_NDR1 Catalytic do 100.0 1.5E-35 3.3E-40 280.4 16.3 167 72-241 1-238 (363)
126 cd06646 STKc_MAP4K5 Catalytic 100.0 1.2E-35 2.6E-40 268.7 14.9 219 71-324 8-266 (267)
127 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.2E-35 4.8E-40 272.0 16.9 242 71-322 5-285 (301)
128 cd05605 STKc_GRK4_like Catalyt 100.0 1.8E-35 3.9E-40 270.7 15.9 214 73-323 1-261 (285)
129 KOG0589 Serine/threonine prote 100.0 3.1E-36 6.8E-41 280.1 11.0 214 71-323 3-258 (426)
130 PHA03211 serine/threonine kina 100.0 1.7E-35 3.6E-40 286.6 16.5 159 71-240 168-363 (461)
131 cd08529 STKc_FA2-like Catalyti 100.0 6E-35 1.3E-39 262.1 18.9 212 73-323 1-253 (256)
132 cd05594 STKc_PKB_alpha Catalyt 100.0 5.3E-36 1.2E-40 279.3 12.4 206 78-323 1-252 (325)
133 cd05092 PTKc_TrkA Catalytic do 100.0 2.1E-35 4.4E-40 269.5 15.9 217 72-325 5-279 (280)
134 cd05614 STKc_MSK2_N N-terminal 100.0 2.4E-35 5.2E-40 275.6 16.7 215 73-322 1-266 (332)
135 KOG0577 Serine/threonine prote 100.0 4.2E-36 9E-41 281.2 11.4 208 74-323 28-278 (948)
136 cd07855 STKc_ERK5 Catalytic do 100.0 4.4E-35 9.6E-40 274.1 18.4 248 71-323 4-294 (334)
137 cd05584 STKc_p70S6K Catalytic 100.0 2.5E-35 5.4E-40 274.6 16.6 205 78-322 2-255 (323)
138 PHA03209 serine/threonine kina 100.0 2.2E-35 4.7E-40 278.7 16.4 156 70-239 64-256 (357)
139 cd05053 PTKc_FGFR Catalytic do 100.0 1.5E-35 3.3E-40 271.8 14.7 223 69-328 9-292 (293)
140 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.8E-35 6.2E-40 266.4 16.1 221 71-327 4-267 (268)
141 cd06654 STKc_PAK1 Catalytic do 100.0 3.2E-35 7E-40 270.5 16.5 216 71-323 19-270 (296)
142 cd05592 STKc_nPKC_theta_delta 100.0 3.6E-35 7.7E-40 272.8 16.9 204 78-321 1-246 (316)
143 cd05115 PTKc_Zap-70 Catalytic 100.0 4.5E-35 9.8E-40 263.9 17.0 213 79-327 2-255 (257)
144 cd05082 PTKc_Csk Catalytic dom 100.0 3.4E-35 7.4E-40 264.2 16.2 210 72-327 6-256 (256)
145 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.4E-35 5.2E-40 265.5 15.2 214 72-325 4-256 (256)
146 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.9E-35 6.3E-40 268.2 15.9 235 72-328 4-284 (284)
147 KOG0667 Dual-specificity tyros 100.0 1.4E-35 3E-40 282.5 13.9 160 73-243 187-392 (586)
148 cd05590 STKc_nPKC_eta Catalyti 100.0 4.3E-35 9.2E-40 272.7 17.0 202 78-319 1-243 (320)
149 cd05587 STKc_cPKC Catalytic do 100.0 2.6E-35 5.6E-40 274.6 15.5 205 73-317 1-246 (324)
150 cd06645 STKc_MAP4K3 Catalytic 100.0 2.7E-35 5.8E-40 266.4 15.2 216 72-322 9-264 (267)
151 cd05591 STKc_nPKC_epsilon Cata 100.0 1.9E-35 4.2E-40 275.1 14.6 206 78-323 1-254 (321)
152 PHA03207 serine/threonine kina 100.0 3.1E-35 6.7E-40 281.1 16.2 237 71-323 91-375 (392)
153 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-35 3.2E-40 276.8 13.6 157 78-241 1-198 (329)
154 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-35 3.5E-40 282.1 14.1 166 73-241 2-250 (382)
155 cd06625 STKc_MEKK3_like Cataly 100.0 5.8E-35 1.3E-39 263.4 16.9 217 72-323 2-260 (263)
156 cd05069 PTKc_Yes Catalytic dom 100.0 7E-35 1.5E-39 262.9 17.5 215 72-326 6-259 (260)
157 cd05616 STKc_cPKC_beta Catalyt 100.0 3.2E-35 6.9E-40 273.9 15.7 205 73-317 1-246 (323)
158 cd05621 STKc_ROCK2 Catalytic d 100.0 2.2E-35 4.8E-40 279.9 14.8 169 67-241 38-249 (370)
159 cd05601 STKc_CRIK Catalytic do 100.0 1E-35 2.2E-40 277.9 12.4 215 72-322 1-262 (330)
160 cd05055 PTKc_PDGFR Catalytic d 100.0 5.5E-35 1.2E-39 269.8 17.1 221 71-327 34-301 (302)
161 cd06613 STKc_MAP4K3_like Catal 100.0 6.9E-35 1.5E-39 262.6 17.4 217 71-322 2-259 (262)
162 KOG0196 Tyrosine kinase, EPH ( 100.0 1.4E-36 3E-41 292.2 6.6 222 72-329 629-893 (996)
163 cd05065 PTKc_EphR_B Catalytic 100.0 4.2E-35 9.2E-40 265.5 16.0 221 72-327 4-268 (269)
164 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.9E-35 1.5E-39 269.1 17.6 223 71-330 14-299 (304)
165 cd07861 STKc_CDK1_euk Catalyti 100.0 5.9E-35 1.3E-39 266.6 16.9 233 73-322 1-281 (285)
166 cd05059 PTKc_Tec_like Catalyti 100.0 4.6E-35 1E-39 263.5 15.9 213 72-324 4-255 (256)
167 cd05607 STKc_GRK7 Catalytic do 100.0 3.4E-35 7.4E-40 267.7 15.2 209 80-324 1-251 (277)
168 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.1E-35 1.3E-39 264.8 16.6 217 74-327 1-272 (273)
169 KOG0584 Serine/threonine prote 100.0 2.2E-36 4.9E-41 285.9 7.3 210 75-323 43-296 (632)
170 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5E-35 1.1E-39 267.4 16.0 233 73-327 5-283 (284)
171 cd05575 STKc_SGK Catalytic dom 100.0 2.3E-35 5E-40 274.8 14.0 201 78-318 1-242 (323)
172 cd05608 STKc_GRK1 Catalytic do 100.0 4.8E-35 1E-39 267.1 15.8 207 80-322 1-256 (280)
173 cd05588 STKc_aPKC Catalytic do 100.0 3E-35 6.5E-40 274.8 14.8 157 78-241 1-198 (329)
174 cd05032 PTKc_InsR_like Catalyt 100.0 4.4E-35 9.4E-40 266.4 15.4 218 71-325 5-276 (277)
175 cd05570 STKc_PKC Catalytic dom 100.0 3.7E-35 8.1E-40 272.8 15.3 205 78-322 1-251 (318)
176 cd05088 PTKc_Tie2 Catalytic do 100.0 5.3E-35 1.1E-39 269.9 16.1 221 71-331 6-284 (303)
177 cd07867 STKc_CDC2L6 Catalytic 100.0 7.2E-35 1.6E-39 270.3 17.1 160 77-242 6-219 (317)
178 cd05103 PTKc_VEGFR2 Catalytic 100.0 9.8E-35 2.1E-39 272.8 18.1 223 71-329 6-341 (343)
179 cd05598 STKc_LATS Catalytic do 100.0 1.4E-35 3.1E-40 281.9 12.6 167 72-241 1-246 (376)
180 cd05051 PTKc_DDR Catalytic dom 100.0 5.8E-35 1.2E-39 268.2 16.1 225 71-325 4-295 (296)
181 cd05105 PTKc_PDGFR_alpha Catal 100.0 6E-35 1.3E-39 279.1 16.8 224 70-329 35-399 (400)
182 cd05056 PTKc_FAK Catalytic dom 100.0 1.2E-34 2.6E-39 262.8 17.9 220 72-329 6-267 (270)
183 cd05620 STKc_nPKC_delta Cataly 100.0 5.1E-35 1.1E-39 271.7 15.8 204 78-321 1-246 (316)
184 cd05039 PTKc_Csk_like Catalyti 100.0 7.1E-35 1.5E-39 262.0 16.2 212 71-327 5-256 (256)
185 cd05629 STKc_NDR_like_fungal C 100.0 2.9E-35 6.3E-40 279.9 14.4 167 72-241 1-250 (377)
186 cd08219 STKc_Nek3 Catalytic do 100.0 6.4E-35 1.4E-39 262.2 15.7 212 73-323 1-252 (255)
187 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.2E-34 4.8E-39 262.8 19.4 234 72-322 1-282 (286)
188 cd05097 PTKc_DDR_like Catalyti 100.0 7.1E-35 1.5E-39 267.9 16.2 224 72-325 5-294 (295)
189 cd06637 STKc_TNIK Catalytic do 100.0 5.2E-35 1.1E-39 265.2 15.0 215 69-322 3-268 (272)
190 cd07865 STKc_CDK9 Catalytic do 100.0 1.6E-34 3.4E-39 266.8 18.5 168 71-241 11-226 (310)
191 cd05095 PTKc_DDR2 Catalytic do 100.0 6.6E-35 1.4E-39 268.2 15.8 224 72-325 5-295 (296)
192 cd06624 STKc_ASK Catalytic dom 100.0 1.3E-34 2.8E-39 262.3 17.4 217 69-322 5-264 (268)
193 cd06609 STKc_MST3_like Catalyt 100.0 1.1E-34 2.4E-39 263.5 17.0 213 72-322 1-250 (274)
194 cd06643 STKc_SLK Catalytic dom 100.0 7.7E-35 1.7E-39 265.8 16.0 212 74-322 7-261 (282)
195 cd07850 STKc_JNK Catalytic dom 100.0 1.3E-34 2.9E-39 272.9 18.0 245 70-323 14-311 (353)
196 cd05602 STKc_SGK1 Catalytic do 100.0 4.8E-35 1E-39 272.9 14.7 205 78-322 1-246 (325)
197 cd05066 PTKc_EphR_A Catalytic 100.0 1E-34 2.2E-39 262.9 16.2 220 72-327 4-266 (267)
198 cd05061 PTKc_InsR Catalytic do 100.0 7.8E-35 1.7E-39 266.7 15.5 223 69-328 3-279 (288)
199 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.8E-34 3.9E-39 262.7 17.8 212 73-323 5-253 (277)
200 cd05619 STKc_nPKC_theta Cataly 100.0 8.2E-35 1.8E-39 270.3 15.8 204 78-321 1-246 (316)
201 cd06655 STKc_PAK2 Catalytic do 100.0 8.4E-35 1.8E-39 267.7 15.6 238 71-350 18-291 (296)
202 KOG4278 Protein tyrosine kinas 100.0 2.4E-35 5.1E-40 277.5 11.9 228 65-331 260-527 (1157)
203 cd06612 STKc_MST1_2 Catalytic 100.0 1.2E-34 2.7E-39 260.0 16.2 213 71-322 2-252 (256)
204 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.6E-34 3.4E-39 263.5 17.1 213 72-322 1-260 (283)
205 KOG0611 Predicted serine/threo 100.0 1.1E-35 2.4E-40 267.8 9.2 210 72-323 53-303 (668)
206 cd05604 STKc_SGK3 Catalytic do 100.0 3.8E-35 8.3E-40 273.6 13.1 207 78-324 1-248 (325)
207 cd07879 STKc_p38delta_MAPK13 C 100.0 1.9E-34 4.2E-39 270.7 17.9 244 71-329 14-305 (342)
208 cd05622 STKc_ROCK1 Catalytic d 100.0 8.7E-35 1.9E-39 275.9 15.7 171 65-241 36-249 (371)
209 cd05057 PTKc_EGFR_like Catalyt 100.0 1.8E-34 3.9E-39 262.9 17.1 222 72-330 7-271 (279)
210 cd06628 STKc_MAPKKK_Byr2_like 100.0 2E-34 4.4E-39 260.6 17.2 215 73-322 1-263 (267)
211 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.3E-34 4.9E-39 262.9 17.6 234 72-322 1-282 (286)
212 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-34 2.8E-39 265.0 16.0 212 74-322 2-260 (285)
213 cd06651 STKc_MEKK3 Catalytic d 100.0 2.1E-34 4.6E-39 260.6 17.1 166 72-241 2-211 (266)
214 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-34 2.3E-39 268.5 15.5 227 72-324 1-288 (308)
215 cd07860 STKc_CDK2_3 Catalytic 100.0 2.5E-34 5.5E-39 262.4 17.6 237 73-322 1-280 (284)
216 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.6E-34 3.4E-39 264.9 16.3 166 70-242 3-207 (291)
217 cd07857 STKc_MPK1 Catalytic do 100.0 1.6E-34 3.5E-39 270.1 16.7 242 73-322 1-291 (332)
218 cd05632 STKc_GRK5 Catalytic do 100.0 1.6E-34 3.5E-39 264.4 16.3 212 74-322 2-260 (285)
219 cd06656 STKc_PAK3 Catalytic do 100.0 1.1E-34 2.4E-39 267.0 15.3 215 71-322 18-268 (297)
220 cd06644 STKc_STK10_LOK Catalyt 100.0 2.2E-34 4.7E-39 264.2 17.1 215 71-322 11-268 (292)
221 cd05034 PTKc_Src_like Catalyti 100.0 1.7E-34 3.7E-39 260.2 16.0 217 70-326 4-260 (261)
222 cd05099 PTKc_FGFR4 Catalytic d 100.0 2E-34 4.4E-39 267.3 16.9 224 71-331 11-297 (314)
223 cd05603 STKc_SGK2 Catalytic do 100.0 9.6E-35 2.1E-39 270.4 14.8 201 78-318 1-242 (321)
224 PTZ00266 NIMA-related protein 100.0 1.3E-34 2.8E-39 294.8 16.9 217 69-322 10-294 (1021)
225 cd05041 PTKc_Fes_like Catalyti 100.0 2.1E-34 4.6E-39 258.1 16.4 210 78-325 1-250 (251)
226 cd06605 PKc_MAPKK Catalytic do 100.0 2.5E-34 5.3E-39 259.6 16.9 216 72-323 1-257 (265)
227 cd05073 PTKc_Hck Catalytic dom 100.0 2.3E-34 5E-39 259.5 16.7 217 70-326 4-259 (260)
228 PHA03210 serine/threonine kina 100.0 6.7E-35 1.5E-39 286.7 14.2 242 70-323 146-454 (501)
229 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.4E-34 5.3E-39 269.1 17.3 223 71-330 11-296 (334)
230 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-34 2.9E-39 267.6 15.3 224 71-331 17-303 (307)
231 cd08223 STKc_Nek4 Catalytic do 100.0 4.3E-34 9.2E-39 256.9 17.9 212 73-323 1-254 (257)
232 cd05050 PTKc_Musk Catalytic do 100.0 2.6E-34 5.7E-39 263.0 16.7 219 71-326 4-288 (288)
233 cd05582 STKc_RSK_N N-terminal 100.0 3E-35 6.5E-40 273.4 10.5 202 78-319 2-245 (318)
234 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.6E-34 3.4E-39 264.1 15.1 224 72-324 5-267 (284)
235 cd05085 PTKc_Fer Catalytic dom 100.0 4E-34 8.6E-39 256.2 17.3 209 78-325 1-249 (250)
236 cd05574 STKc_phototropin_like 100.0 4.6E-34 1E-38 264.9 18.3 217 72-322 1-288 (316)
237 cd06658 STKc_PAK5 Catalytic do 100.0 4.6E-34 9.9E-39 262.4 18.0 213 74-323 24-272 (292)
238 cd07842 STKc_CDK8_like Catalyt 100.0 6.7E-34 1.4E-38 263.4 19.1 168 73-244 1-221 (316)
239 cd05040 PTKc_Ack_like Catalyti 100.0 3.7E-34 7.9E-39 257.4 16.8 213 78-325 1-256 (257)
240 cd05627 STKc_NDR2 Catalytic do 100.0 7.9E-35 1.7E-39 275.2 13.0 167 72-241 1-238 (360)
241 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-33 2.3E-38 255.8 19.9 219 73-322 1-263 (268)
242 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.6E-34 2.1E-38 259.4 19.7 221 72-322 1-265 (287)
243 cd05047 PTKc_Tie Catalytic dom 100.0 4.1E-34 8.9E-39 259.4 17.1 211 78-328 1-269 (270)
244 cd07833 STKc_CDKL Catalytic do 100.0 3.7E-34 8.1E-39 261.6 16.9 240 72-322 1-284 (288)
245 cd07844 STKc_PCTAIRE_like Cata 100.0 3.7E-34 8.1E-39 262.3 16.9 165 71-242 4-207 (291)
246 cd06616 PKc_MKK4 Catalytic dom 100.0 2.1E-34 4.5E-39 263.6 15.0 217 72-323 4-267 (288)
247 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.1E-34 1.1E-38 267.3 17.9 246 71-329 4-299 (337)
248 cd05615 STKc_cPKC_alpha Cataly 100.0 3.5E-34 7.5E-39 266.9 16.7 206 73-318 1-247 (323)
249 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8E-34 1.7E-38 259.5 18.8 214 72-323 1-262 (286)
250 KOG0610 Putative serine/threon 100.0 3E-34 6.5E-39 259.5 15.6 218 70-321 75-390 (459)
251 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-34 3.6E-39 259.5 13.7 209 72-326 6-253 (254)
252 cd00192 PTKc Catalytic domain 100.0 7E-34 1.5E-38 255.4 17.6 211 78-325 1-262 (262)
253 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.4E-34 9.5E-39 257.9 16.4 221 72-322 1-263 (267)
254 cd08217 STKc_Nek2 Catalytic do 100.0 5.6E-34 1.2E-38 256.6 16.9 212 73-323 1-262 (265)
255 KOG0032 Ca2+/calmodulin-depend 100.0 1.7E-34 3.7E-39 271.2 14.0 216 71-323 34-293 (382)
256 cd08227 PK_STRAD_alpha Pseudok 100.0 3.7E-34 8E-39 267.1 16.2 164 76-242 2-213 (327)
257 cd06611 STKc_SLK_like Catalyti 100.0 3.2E-34 6.9E-39 261.3 15.4 216 71-323 4-262 (280)
258 cd06626 STKc_MEKK4 Catalytic d 100.0 1.1E-33 2.4E-38 255.1 18.4 218 73-322 1-260 (264)
259 cd06640 STKc_MST4 Catalytic do 100.0 7.5E-34 1.6E-38 258.7 17.4 213 72-323 4-253 (277)
260 KOG4717 Serine/threonine prote 100.0 1.3E-34 2.9E-39 267.5 12.4 220 71-331 17-280 (864)
261 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.6E-34 3.4E-39 269.7 13.1 207 78-318 1-249 (327)
262 cd07832 STKc_CCRK Catalytic do 100.0 1E-33 2.2E-38 258.4 18.1 241 73-323 1-282 (286)
263 PLN00113 leucine-rich repeat r 100.0 1.1E-33 2.4E-38 299.2 20.9 231 72-331 690-955 (968)
264 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.1E-34 2E-38 266.5 18.0 246 64-323 9-300 (345)
265 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.4E-34 9.6E-39 260.6 15.4 221 63-322 7-278 (282)
266 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-33 2.6E-38 260.2 18.3 213 74-323 23-271 (297)
267 cd06638 STKc_myosinIIIA Cataly 100.0 4.7E-34 1E-38 260.9 15.5 224 63-324 9-284 (286)
268 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.4E-34 7.3E-39 273.9 15.1 223 70-328 35-400 (401)
269 KOG0579 Ste20-like serine/thre 100.0 3.1E-35 6.7E-40 277.2 7.7 212 72-322 32-288 (1187)
270 cd05597 STKc_DMPK_like Catalyt 100.0 6.4E-34 1.4E-38 266.0 16.5 164 72-241 1-210 (331)
271 cd05044 PTKc_c-ros Catalytic d 100.0 5.5E-34 1.2E-38 258.0 15.5 212 78-326 1-269 (269)
272 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.2E-34 1.6E-38 256.9 16.2 202 78-324 1-261 (262)
273 cd08218 STKc_Nek1 Catalytic do 100.0 8.5E-34 1.8E-38 254.9 16.5 211 73-322 1-252 (256)
274 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.5E-33 3.3E-38 255.4 18.1 215 78-325 1-268 (269)
275 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-33 2.7E-38 255.4 17.5 215 72-322 2-260 (265)
276 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-33 2.7E-38 253.7 17.3 211 73-322 1-254 (258)
277 cd08221 STKc_Nek9 Catalytic do 100.0 9.9E-34 2.2E-38 254.5 16.6 213 73-324 1-254 (256)
278 cd05112 PTKc_Itk Catalytic dom 100.0 8.2E-34 1.8E-38 255.0 15.9 213 72-324 4-255 (256)
279 smart00219 TyrKc Tyrosine kina 100.0 1.5E-33 3.4E-38 252.9 17.6 213 74-324 1-258 (258)
280 cd06639 STKc_myosinIIIB Cataly 100.0 5.3E-34 1.2E-38 261.4 14.8 223 63-323 13-287 (291)
281 cd07866 STKc_BUR1 Catalytic do 100.0 2.4E-33 5.1E-38 259.0 19.1 244 71-322 7-307 (311)
282 cd08220 STKc_Nek8 Catalytic do 100.0 1.8E-33 3.8E-38 252.5 17.6 211 73-323 1-253 (256)
283 KOG2052 Activin A type IB rece 100.0 7.6E-34 1.6E-38 258.8 15.2 232 72-329 211-505 (513)
284 cd07845 STKc_CDK10 Catalytic d 100.0 1.7E-33 3.7E-38 260.4 17.8 239 71-323 6-290 (309)
285 cd06647 STKc_PAK_I Catalytic d 100.0 1E-33 2.3E-38 260.1 16.1 216 71-323 18-269 (293)
286 cd07834 STKc_MAPK Catalytic do 100.0 2.4E-33 5.2E-38 261.7 18.6 251 73-329 1-297 (330)
287 cd06607 STKc_TAO Catalytic dom 100.0 1.5E-33 3.3E-38 260.6 17.1 211 71-323 14-267 (307)
288 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.8E-34 6.2E-39 258.7 11.9 202 78-324 1-257 (258)
289 KOG4257 Focal adhesion tyrosin 100.0 2.4E-34 5.2E-39 270.9 11.6 218 74-329 391-651 (974)
290 cd06631 STKc_YSK4 Catalytic do 100.0 9.9E-34 2.2E-38 255.9 15.3 216 73-322 1-261 (265)
291 KOG4645 MAPKKK (MAP kinase kin 100.0 4.2E-35 9.1E-40 295.0 6.9 221 69-323 1232-1494(1509)
292 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-33 2.9E-38 264.4 16.6 241 71-323 6-295 (337)
293 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.5E-33 5.5E-38 254.2 17.9 219 73-323 2-269 (272)
294 cd07831 STKc_MOK Catalytic dom 100.0 3.5E-33 7.6E-38 254.3 18.9 236 74-322 1-278 (282)
295 cd05609 STKc_MAST Catalytic do 100.0 1.1E-33 2.3E-38 261.3 15.6 222 72-326 1-273 (305)
296 cd05578 STKc_Yank1 Catalytic d 100.0 2.1E-33 4.6E-38 252.7 16.9 211 73-321 1-253 (258)
297 cd07841 STKc_CDK7 Catalytic do 100.0 7.2E-33 1.6E-37 254.7 20.6 238 73-322 1-281 (298)
298 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2E-33 4.3E-38 252.7 16.5 202 78-325 1-259 (259)
299 KOG0599 Phosphorylase kinase g 100.0 1.1E-34 2.4E-39 249.5 7.7 216 71-323 16-283 (411)
300 cd05042 PTKc_Aatyk Catalytic d 100.0 2.5E-33 5.4E-38 253.9 17.1 214 79-325 2-268 (269)
301 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.4E-33 1.2E-37 251.9 19.2 214 79-325 2-267 (268)
302 cd07835 STKc_CDK1_like Catalyt 100.0 2.4E-33 5.2E-38 255.8 17.0 234 74-322 1-279 (283)
303 cd05046 PTK_CCK4 Pseudokinase 100.0 1.6E-33 3.5E-38 255.9 15.7 217 72-325 5-274 (275)
304 cd06623 PKc_MAPKK_plant_like C 100.0 1.8E-33 3.9E-38 253.5 15.8 216 72-323 1-256 (264)
305 cd07836 STKc_Pho85 Catalytic d 100.0 4.6E-33 1E-37 253.9 18.6 235 73-322 1-280 (284)
306 cd07843 STKc_CDC2L1 Catalytic 100.0 2.3E-33 5E-38 257.4 16.7 241 71-322 4-289 (293)
307 cd05623 STKc_MRCK_alpha Cataly 100.0 1.2E-33 2.5E-38 264.3 14.9 164 72-241 1-210 (332)
308 cd07854 STKc_MAPK4_6 Catalytic 100.0 6E-33 1.3E-37 260.6 19.8 238 71-322 4-299 (342)
309 cd05624 STKc_MRCK_beta Catalyt 100.0 9.1E-34 2E-38 265.0 14.2 164 72-241 1-210 (331)
310 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.2E-33 2.6E-38 263.8 14.9 245 67-323 5-288 (328)
311 cd08528 STKc_Nek10 Catalytic d 100.0 2.3E-33 4.9E-38 254.1 16.1 214 73-325 1-268 (269)
312 cd06608 STKc_myosinIII_like Ca 100.0 1.6E-33 3.6E-38 255.1 15.1 216 69-322 3-271 (275)
313 cd05586 STKc_Sck1_like Catalyt 100.0 4.9E-34 1.1E-38 266.6 11.7 155 80-241 1-199 (330)
314 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.8E-33 3.9E-38 256.0 14.5 201 79-324 2-273 (274)
315 KOG0199 ACK and related non-re 100.0 9.1E-34 2E-38 269.9 12.8 222 71-328 109-373 (1039)
316 cd07837 STKc_CdkB_plant Cataly 100.0 6.9E-33 1.5E-37 254.3 18.4 239 72-322 1-290 (295)
317 cd05580 STKc_PKA Catalytic dom 100.0 4.2E-33 9.1E-38 255.5 16.7 207 72-321 1-252 (290)
318 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-33 1E-37 261.4 17.3 241 70-322 13-297 (343)
319 cd07840 STKc_CDK9_like Catalyt 100.0 6.8E-33 1.5E-37 252.8 17.8 237 74-322 1-283 (287)
320 cd06618 PKc_MKK7 Catalytic dom 100.0 5.6E-33 1.2E-37 255.4 17.3 217 70-323 13-273 (296)
321 cd05118 STKc_CMGC Catalytic do 100.0 1.4E-32 3E-37 250.4 19.7 236 74-322 1-279 (283)
322 cd07851 STKc_p38 Catalytic dom 100.0 6.1E-33 1.3E-37 260.7 17.6 242 70-323 13-298 (343)
323 cd06648 STKc_PAK_II Catalytic 100.0 8.4E-33 1.8E-37 253.0 18.1 212 74-322 21-268 (285)
324 cd08225 STKc_Nek5 Catalytic do 100.0 6.1E-33 1.3E-37 249.2 16.8 212 73-323 1-254 (257)
325 KOG0596 Dual specificity; seri 100.0 3.5E-34 7.6E-39 266.9 8.7 216 71-322 360-626 (677)
326 cd06635 STKc_TAO1 Catalytic do 100.0 6.9E-33 1.5E-37 257.5 17.5 213 74-328 27-282 (317)
327 KOG0666 Cyclin C-dependent kin 100.0 1.7E-33 3.7E-38 246.1 12.5 168 71-242 23-243 (438)
328 cd06641 STKc_MST3 Catalytic do 100.0 6.3E-33 1.4E-37 252.6 16.7 212 73-323 5-253 (277)
329 KOG0983 Mitogen-activated prot 100.0 2.7E-33 5.8E-38 241.0 12.9 216 72-323 92-349 (391)
330 cd06653 STKc_MEKK3_like_1 Cata 100.0 9E-33 2E-37 249.7 17.1 215 72-322 2-260 (264)
331 KOG1094 Discoidin domain recep 100.0 2.1E-33 4.4E-38 263.0 13.2 225 72-327 538-804 (807)
332 cd07864 STKc_CDK12 Catalytic d 100.0 9.9E-33 2.1E-37 254.1 17.6 241 70-322 5-298 (302)
333 PLN00009 cyclin-dependent kina 100.0 4.7E-33 1E-37 255.5 15.2 238 72-322 2-283 (294)
334 cd08530 STKc_CNK2-like Catalyt 100.0 2.4E-32 5.1E-37 245.1 19.1 209 73-322 1-252 (256)
335 cd05122 PKc_STE Catalytic doma 100.0 1.5E-32 3.2E-37 245.0 17.2 212 73-322 1-250 (253)
336 cd06657 STKc_PAK4 Catalytic do 100.0 1.3E-32 2.9E-37 252.7 17.2 209 77-322 25-269 (292)
337 cd06917 STKc_NAK1_like Catalyt 100.0 1E-32 2.2E-37 250.9 16.0 213 73-323 2-255 (277)
338 cd06614 STKc_PAK Catalytic dom 100.0 1.4E-32 2.9E-37 251.4 16.2 216 70-323 17-270 (286)
339 KOG3653 Transforming growth fa 100.0 1.2E-32 2.5E-37 252.7 15.6 243 71-331 209-507 (534)
340 cd07838 STKc_CDK4_6_like Catal 100.0 2.8E-32 6.1E-37 248.9 18.2 234 74-322 1-283 (287)
341 KOG0690 Serine/threonine prote 100.0 2.9E-33 6.3E-38 246.0 11.1 164 71-241 167-370 (516)
342 KOG4250 TANK binding protein k 100.0 4.2E-33 9E-38 266.8 13.1 241 74-329 15-312 (732)
343 cd08216 PK_STRAD Pseudokinase 100.0 6.7E-32 1.4E-36 250.1 20.7 234 84-323 12-295 (314)
344 cd08215 STKc_Nek Catalytic dom 100.0 3.2E-32 7E-37 244.0 18.0 212 73-323 1-255 (258)
345 cd06634 STKc_TAO2 Catalytic do 100.0 1.8E-32 3.9E-37 253.6 16.7 212 72-325 15-269 (308)
346 cd08226 PK_STRAD_beta Pseudoki 100.0 1.4E-32 3E-37 256.7 15.9 249 78-330 4-317 (328)
347 cd07829 STKc_CDK_like Catalyti 100.0 8.6E-32 1.9E-36 245.1 20.5 234 74-322 1-278 (282)
348 cd06606 STKc_MAPKKK Catalytic 100.0 2.2E-32 4.8E-37 244.9 16.1 215 73-322 1-256 (260)
349 cd06633 STKc_TAO3 Catalytic do 100.0 4.1E-32 8.9E-37 251.8 18.1 208 74-323 23-273 (313)
350 cd05579 STKc_MAST_like Catalyt 100.0 2.8E-32 6E-37 245.6 16.2 212 80-325 1-256 (265)
351 KOG0586 Serine/threonine prote 100.0 6.4E-33 1.4E-37 262.1 11.5 212 70-322 54-305 (596)
352 PTZ00024 cyclin-dependent prot 100.0 4.7E-32 1E-36 253.7 17.3 244 71-322 7-312 (335)
353 cd06627 STKc_Cdc7_like Catalyt 100.0 5E-32 1.1E-36 242.5 16.4 211 73-322 1-250 (254)
354 KOG0986 G protein-coupled rece 100.0 2.2E-33 4.7E-38 256.1 7.6 211 71-318 184-436 (591)
355 cd07830 STKc_MAK_like Catalyti 100.0 1.6E-31 3.4E-36 243.7 19.9 237 74-323 1-280 (283)
356 KOG1006 Mitogen-activated prot 100.0 6.5E-34 1.4E-38 243.9 3.9 219 72-323 64-327 (361)
357 cd05633 STKc_GRK3 Catalytic do 100.0 4.6E-32 1E-36 247.4 16.0 206 79-323 1-255 (279)
358 cd05572 STKc_cGK_PKG Catalytic 100.0 6.4E-32 1.4E-36 243.7 16.7 206 80-322 1-251 (262)
359 cd05581 STKc_PDK1 Catalytic do 100.0 7E-32 1.5E-36 245.2 17.0 215 72-322 1-276 (280)
360 KOG0574 STE20-like serine/thre 100.0 2.8E-34 6.1E-39 250.0 0.7 212 73-323 34-283 (502)
361 cd05577 STKc_GRK Catalytic dom 100.0 7.5E-32 1.6E-36 245.5 15.7 203 80-319 1-245 (277)
362 KOG4236 Serine/threonine prote 100.0 2.5E-33 5.4E-38 259.7 5.5 158 77-242 569-769 (888)
363 KOG1025 Epidermal growth facto 100.0 1.1E-31 2.4E-36 259.5 16.0 220 74-330 698-960 (1177)
364 KOG0669 Cyclin T-dependent kin 100.0 4.7E-33 1E-37 237.0 5.1 169 71-242 16-232 (376)
365 cd05583 STKc_MSK_N N-terminal 100.0 3.2E-31 6.8E-36 242.6 17.2 220 73-327 1-267 (288)
366 cd08222 STKc_Nek11 Catalytic d 100.0 6.4E-31 1.4E-35 236.9 18.6 210 73-322 1-256 (260)
367 PHA03390 pk1 serine/threonine- 100.0 3.6E-31 7.9E-36 239.9 16.8 211 67-322 9-261 (267)
368 cd05611 STKc_Rim15_like Cataly 100.0 2.1E-31 4.5E-36 240.0 15.1 207 78-324 2-249 (260)
369 cd05606 STKc_beta_ARK Catalyti 100.0 5E-31 1.1E-35 240.4 17.3 205 79-322 1-254 (278)
370 KOG0662 Cyclin-dependent kinas 100.0 1.7E-31 3.6E-36 217.1 12.3 239 73-322 3-282 (292)
371 cd05613 STKc_MSK1_N N-terminal 100.0 6.3E-31 1.4E-35 240.9 17.3 215 73-322 1-267 (290)
372 KOG0603 Ribosomal protein S6 k 100.0 1.1E-31 2.4E-36 254.9 11.7 206 70-323 320-563 (612)
373 KOG0604 MAP kinase-activated p 100.0 7.7E-32 1.7E-36 234.6 7.4 215 70-322 59-321 (400)
374 cd05123 STKc_AGC Catalytic dom 100.0 4.1E-30 9E-35 229.8 18.5 200 80-319 1-240 (250)
375 KOG0612 Rho-associated, coiled 100.0 3.7E-31 7.9E-36 263.7 12.0 170 65-240 68-282 (1317)
376 PLN03225 Serine/threonine-prot 100.0 2.9E-30 6.4E-35 255.9 17.7 233 70-323 130-450 (566)
377 cd05610 STKc_MASTL Catalytic d 100.0 2.5E-30 5.5E-35 262.0 17.1 110 71-183 3-152 (669)
378 KOG0614 cGMP-dependent protein 100.0 4.7E-31 1E-35 243.7 8.7 164 70-241 418-621 (732)
379 KOG0668 Casein kinase II, alph 100.0 1.5E-30 3.4E-35 218.8 10.4 241 70-322 36-321 (338)
380 KOG0696 Serine/threonine prote 100.0 2.1E-30 4.7E-35 234.2 10.9 165 71-242 348-553 (683)
381 KOG0607 MAP kinase-interacting 100.0 6.2E-30 1.3E-34 224.5 13.2 249 78-344 84-386 (463)
382 KOG0200 Fibroblast/platelet-de 100.0 1.2E-29 2.5E-34 253.8 16.7 228 66-328 290-580 (609)
383 KOG0671 LAMMER dual specificit 100.0 1.7E-30 3.6E-35 233.2 8.4 239 70-322 87-405 (415)
384 KOG0664 Nemo-like MAPK-related 100.0 3.8E-30 8.3E-35 221.6 9.4 163 73-241 54-260 (449)
385 smart00220 S_TKc Serine/Threon 100.0 6.5E-29 1.4E-33 219.9 17.6 202 84-322 1-240 (244)
386 KOG1151 Tousled-like protein k 100.0 5E-31 1.1E-35 240.2 3.1 225 70-322 461-740 (775)
387 cd05576 STKc_RPK118_like Catal 100.0 2.4E-29 5.2E-34 224.0 13.4 184 83-318 4-224 (237)
388 KOG0984 Mitogen-activated prot 100.0 7.7E-30 1.7E-34 211.6 6.4 181 67-254 41-267 (282)
389 KOG0695 Serine/threonine prote 100.0 4.2E-29 9.2E-34 220.7 11.0 166 69-241 247-453 (593)
390 KOG1024 Receptor-like protein 100.0 1.2E-29 2.6E-34 228.0 7.6 231 65-332 277-560 (563)
391 KOG1027 Serine/threonine prote 100.0 4.3E-30 9.3E-35 249.6 4.9 208 74-322 511-766 (903)
392 KOG0670 U4/U6-associated splic 100.0 2.6E-28 5.6E-33 226.2 10.3 243 70-322 430-745 (752)
393 PLN03224 probable serine/threo 99.9 2.8E-27 6.1E-32 229.7 16.3 165 70-240 143-434 (507)
394 KOG0587 Traf2- and Nck-interac 99.9 1.5E-27 3.4E-32 232.9 13.8 221 64-322 11-281 (953)
395 KOG1290 Serine/threonine prote 99.9 3.1E-27 6.7E-32 217.7 13.6 95 71-168 77-221 (590)
396 KOG0665 Jun-N-terminal kinase 99.9 1.4E-27 3E-32 209.9 10.6 238 71-322 16-309 (369)
397 KOG1152 Signal transduction se 99.9 6.1E-28 1.3E-32 226.2 7.2 161 71-240 560-770 (772)
398 KOG0608 Warts/lats-like serine 99.9 1E-27 2.2E-32 226.6 6.9 171 72-245 629-877 (1034)
399 KOG1345 Serine/threonine kinas 99.9 1.2E-25 2.5E-30 193.8 13.4 216 72-323 24-284 (378)
400 cd00180 PKc Catalytic domain o 99.9 4.4E-25 9.6E-30 190.4 15.8 173 80-323 1-214 (215)
401 KOG1167 Serine/threonine prote 99.9 7.3E-26 1.6E-30 205.8 9.5 250 67-323 31-381 (418)
402 smart00750 KIND kinase non-cat 99.9 3.9E-25 8.5E-30 187.5 13.3 156 130-330 15-172 (176)
403 KOG0576 Mitogen-activated prot 99.9 1.7E-26 3.7E-31 219.7 4.5 218 70-322 13-270 (829)
404 smart00221 STYKc Protein kinas 99.9 2.4E-24 5.1E-29 188.9 15.4 162 74-241 1-202 (225)
405 PLN00181 protein SPA1-RELATED; 99.9 3.3E-24 7.2E-29 222.1 12.1 156 130-322 78-264 (793)
406 PRK09188 serine/threonine prot 99.9 3.2E-22 7E-27 186.8 11.3 142 70-214 16-195 (365)
407 KOG1164 Casein kinase (serine/ 99.9 2.3E-21 4.9E-26 180.5 16.5 228 73-331 19-301 (322)
408 PF14531 Kinase-like: Kinase-l 99.9 8.7E-21 1.9E-25 170.3 13.5 194 74-314 14-288 (288)
409 KOG0590 Checkpoint kinase and 99.8 2.3E-21 5.1E-26 192.3 8.0 221 75-322 321-584 (601)
410 KOG1165 Casein kinase (serine/ 99.8 1.2E-19 2.5E-24 161.0 17.0 167 72-243 28-240 (449)
411 KOG1163 Casein kinase (serine/ 99.8 5.3E-20 1.2E-24 156.6 12.9 170 70-244 13-226 (341)
412 KOG0606 Microtubule-associated 99.8 1.1E-20 2.5E-25 188.6 7.2 232 70-345 81-331 (1205)
413 COG0515 SPS1 Serine/threonine 99.8 6E-19 1.3E-23 161.7 17.9 222 74-323 2-275 (384)
414 KOG1033 eIF-2alpha kinase PEK/ 99.8 6.2E-21 1.3E-25 178.8 2.2 93 136-234 363-457 (516)
415 KOG1240 Protein kinase contain 99.8 1.8E-19 3.9E-24 180.4 11.6 214 73-324 24-292 (1431)
416 KOG4158 BRPK/PTEN-induced prot 99.8 5.9E-19 1.3E-23 159.9 8.0 152 137-322 346-509 (598)
417 PRK10359 lipopolysaccharide co 99.8 3.8E-19 8.2E-24 155.2 6.2 142 70-233 29-216 (232)
418 KOG0195 Integrin-linked kinase 99.8 2.9E-19 6.2E-24 154.6 5.1 211 74-327 192-446 (448)
419 KOG0603 Ribosomal protein S6 k 99.7 9.3E-19 2E-23 167.2 2.7 150 79-241 1-193 (612)
420 cd05147 RIO1_euk RIO kinase fa 99.7 7.5E-18 1.6E-22 144.7 7.2 103 77-184 2-166 (190)
421 cd05145 RIO1_like RIO kinase f 99.7 2.8E-17 6E-22 141.4 10.3 104 77-185 2-167 (190)
422 PRK12274 serine/threonine prot 99.7 3.4E-17 7.3E-22 140.2 8.1 163 75-242 5-210 (218)
423 KOG1023 Natriuretic peptide re 99.7 1.2E-16 2.6E-21 152.5 9.6 168 135-331 51-228 (484)
424 KOG1166 Mitotic checkpoint ser 99.7 1.4E-16 3.1E-21 162.0 9.9 164 66-238 692-902 (974)
425 PRK10345 hypothetical protein; 99.6 1.9E-15 4.2E-20 131.2 9.7 102 75-182 5-156 (210)
426 smart00090 RIO RIO-like kinase 99.6 1E-14 2.2E-19 129.6 10.3 115 67-184 23-197 (237)
427 cd05144 RIO2_C RIO kinase fami 99.6 1.9E-14 4.1E-19 124.5 11.2 116 66-185 9-175 (198)
428 TIGR03724 arch_bud32 Kae1-asso 99.5 1.1E-13 2.4E-18 119.7 9.4 100 79-184 1-138 (199)
429 PRK14879 serine/threonine prot 99.5 1.1E-13 2.3E-18 120.8 9.2 100 78-183 2-142 (211)
430 cd05119 RIO RIO kinase family, 99.5 1.5E-13 3.2E-18 117.6 9.4 104 77-185 2-164 (187)
431 PRK09605 bifunctional UGMP fam 99.5 1.2E-13 2.6E-18 137.2 8.8 109 70-184 331-476 (535)
432 KOG0590 Checkpoint kinase and 99.5 4.7E-15 1E-19 147.5 -1.2 220 71-322 19-285 (601)
433 PRK01723 3-deoxy-D-manno-octul 99.3 3.4E-12 7.5E-17 113.5 8.9 102 78-184 37-191 (239)
434 cd05120 APH_ChoK_like Aminogly 99.3 1.3E-11 2.8E-16 100.8 9.0 104 76-183 2-137 (155)
435 KOG1266 Protein kinase [Signal 99.2 2.4E-11 5.2E-16 108.5 7.1 102 136-238 180-281 (458)
436 KOG0601 Cyclin-dependent kinas 99.2 7.5E-12 1.6E-16 120.0 3.9 164 73-240 115-328 (524)
437 KOG1243 Protein kinase [Genera 99.2 7.5E-10 1.6E-14 107.6 14.8 139 90-236 30-200 (690)
438 COG4248 Uncharacterized protei 99.0 5.3E-09 1.2E-13 96.8 14.7 186 135-344 120-319 (637)
439 TIGR01982 UbiB 2-polyprenylphe 99.0 9.7E-10 2.1E-14 106.2 10.1 47 137-186 261-308 (437)
440 cd05151 ChoK Choline Kinase (C 99.0 9.4E-10 2E-14 92.3 7.5 103 77-183 3-135 (170)
441 KOG2137 Protein kinase [Signal 98.9 4.7E-10 1E-14 109.4 3.1 162 69-238 34-208 (700)
442 PRK04750 ubiB putative ubiquin 98.8 1E-08 2.2E-13 100.7 9.1 35 72-107 120-154 (537)
443 KOG0601 Cyclin-dependent kinas 98.8 2.3E-09 4.9E-14 103.1 4.3 163 67-238 260-465 (524)
444 cd05146 RIO3_euk RIO kinase fa 98.8 2.2E-08 4.7E-13 85.8 8.4 104 77-184 2-173 (197)
445 KOG0606 Microtubule-associated 98.8 2.4E-09 5.3E-14 108.5 2.6 170 70-242 802-1038(1205)
446 COG3642 Mn2+-dependent serine/ 98.5 9E-07 2E-11 73.9 8.6 101 78-184 2-140 (204)
447 KOG3741 Poly(A) ribonuclease s 98.4 5.6E-06 1.2E-10 79.0 14.0 130 85-238 289-475 (655)
448 KOG3087 Serine/threonine prote 98.3 1.9E-06 4E-11 71.9 7.5 103 76-183 11-164 (229)
449 PF01163 RIO1: RIO1 family; I 98.2 1.4E-05 3.1E-10 68.1 11.0 92 87-183 1-154 (188)
450 cd05154 ACAD10_11_like Acyl-Co 98.1 1.1E-05 2.5E-10 70.3 9.1 105 78-183 4-205 (223)
451 COG0478 RIO-like serine/threon 98.0 3.7E-05 8E-10 68.2 9.2 106 73-182 92-249 (304)
452 PRK15123 lipopolysaccharide co 97.9 5.2E-05 1.1E-09 68.5 8.6 45 136-183 142-193 (268)
453 PRK09902 hypothetical protein; 97.9 4.7E-05 1E-09 65.7 7.5 100 80-184 26-179 (216)
454 COG1718 RIO1 Serine/threonine 97.6 0.00057 1.2E-08 60.1 10.2 124 55-183 28-214 (268)
455 KOG0576 Mitogen-activated prot 97.6 1.8E-05 4E-10 77.3 0.6 150 71-239 241-430 (829)
456 COG0661 AarF Predicted unusual 97.5 0.00037 8E-09 68.5 8.5 36 148-186 281-316 (517)
457 PF06293 Kdo: Lipopolysacchari 97.5 0.00011 2.4E-09 63.9 4.2 47 135-184 121-170 (206)
458 PF06176 WaaY: Lipopolysacchar 97.4 0.0011 2.4E-08 57.6 9.6 108 70-183 29-182 (229)
459 COG2112 Predicted Ser/Thr prot 97.2 0.0017 3.7E-08 54.2 8.1 104 74-184 24-155 (201)
460 PF13095 FTA2: Kinetochore Sim 97.1 0.0025 5.5E-08 54.6 7.8 101 72-182 37-206 (207)
461 PF01636 APH: Phosphotransfera 97.0 0.0037 8E-08 54.6 8.6 47 77-127 2-48 (239)
462 TIGR02172 Fb_sc_TIGR02172 Fibr 97.0 0.0036 7.9E-08 55.1 8.2 27 156-183 155-181 (226)
463 TIGR02721 ycfN_thiK thiamine k 96.7 0.006 1.3E-07 54.7 7.5 27 156-183 148-174 (256)
464 KOG1035 eIF-2alpha kinase GCN2 96.5 0.012 2.5E-07 62.1 9.2 164 116-329 229-440 (1351)
465 cd05157 ETNK_euk Ethanolamine 96.4 0.018 4E-07 50.7 8.7 29 155-183 171-200 (235)
466 cd05153 HomoserineK_II Homoser 96.1 0.02 4.3E-07 52.5 7.3 28 156-183 177-204 (296)
467 KOG2268 Serine/threonine prote 95.8 0.02 4.3E-07 52.6 5.7 106 73-182 93-249 (465)
468 KOG1235 Predicted unusual prot 95.7 0.081 1.8E-06 52.2 10.2 30 156-185 322-355 (538)
469 PLN02236 choline kinase 95.6 0.06 1.3E-06 50.6 8.7 29 155-183 201-230 (344)
470 PRK09550 mtnK methylthioribose 95.6 0.093 2E-06 50.2 9.8 50 77-126 31-87 (401)
471 PRK05231 homoserine kinase; Pr 95.5 0.063 1.4E-06 49.7 8.4 28 156-183 189-216 (319)
472 TIGR00938 thrB_alt homoserine 95.5 0.08 1.7E-06 48.9 9.0 29 155-183 188-216 (307)
473 PF10707 YrbL-PhoP_reg: PhoP r 95.2 0.14 3E-06 44.1 8.7 96 77-178 6-165 (199)
474 KOG1826 Ras GTPase activating 95.2 0.006 1.3E-07 65.9 0.3 80 156-239 1361-1440(2724)
475 PF07387 Seadorna_VP7: Seadorn 94.7 0.064 1.4E-06 46.7 5.2 40 142-182 151-190 (308)
476 PRK12396 5-methylribose kinase 94.5 0.24 5.2E-06 47.2 9.1 50 77-126 34-89 (409)
477 PLN02876 acyl-CoA dehydrogenas 94.1 0.33 7.2E-06 51.2 10.1 55 77-131 43-101 (822)
478 PF12260 PIP49_C: Protein-kina 93.5 0.17 3.6E-06 43.3 5.5 56 130-185 57-112 (188)
479 KOG2270 Serine/threonine prote 93.4 0.27 5.8E-06 46.2 7.0 104 76-183 148-312 (520)
480 TIGR01767 MTRK 5-methylthiorib 93.4 0.45 9.7E-06 44.8 8.6 48 79-126 2-56 (370)
481 COG5072 ALK1 Serine/threonine 93.2 0.27 6E-06 46.0 6.6 47 135-184 324-370 (488)
482 PLN02421 phosphotransferase, a 93.0 0.55 1.2E-05 43.8 8.7 28 156-183 184-212 (330)
483 cd05155 APH_ChoK_like_1 Unchar 92.7 0.1 2.2E-06 46.1 3.1 29 155-183 165-193 (235)
484 cd05156 ChoK_euk Choline Kinas 92.5 0.24 5.2E-06 45.5 5.5 30 154-183 179-212 (302)
485 PRK10271 thiK thiamine kinase; 92.2 0.11 2.3E-06 44.2 2.5 27 156-183 79-105 (188)
486 cd05150 APH Aminoglycoside 3'- 92.0 0.13 2.8E-06 45.6 2.9 29 155-183 164-192 (244)
487 PHA03111 Ser/Thr kinase; Provi 91.7 0.19 4.1E-06 46.4 3.7 49 137-185 284-351 (444)
488 PF03109 ABC1: ABC1 family; I 91.5 0.092 2E-06 41.2 1.3 30 77-107 16-45 (119)
489 TIGR02906 spore_CotS spore coa 91.1 0.35 7.6E-06 44.4 5.0 28 155-183 188-215 (313)
490 PF01633 Choline_kinase: Choli 90.6 0.17 3.7E-06 43.8 2.3 28 156-183 145-173 (211)
491 COG0510 ycfN Thiamine kinase a 90.2 0.44 9.5E-06 43.1 4.6 28 156-183 155-182 (269)
492 PF03881 Fructosamin_kin: Fruc 89.8 0.83 1.8E-05 41.8 6.1 48 75-127 20-67 (288)
493 cd05152 MPH2' Macrolide 2'-Pho 89.2 0.32 6.9E-06 44.2 3.0 30 155-184 186-216 (276)
494 PF05445 Pox_ser-thr_kin: Poxv 89.2 0.27 5.7E-06 45.7 2.3 32 155-186 299-348 (434)
495 smart00587 CHK ZnF_C4 abd HLH 88.9 0.37 8E-06 41.3 3.0 28 156-183 122-154 (196)
496 KOG1093 Predicted protein kina 88.8 0.31 6.8E-06 47.6 2.6 78 218-318 110-189 (725)
497 COG2334 Putative homoserine ki 88.7 0.34 7.4E-06 45.1 2.8 28 156-183 199-227 (331)
498 TIGR02904 spore_ysxE spore coa 86.7 0.39 8.4E-06 44.4 1.9 28 156-183 198-225 (309)
499 PTZ00296 choline kinase; Provi 86.4 3.5 7.7E-05 40.1 8.4 27 156-183 286-312 (442)
500 KOG1236 Predicted unusual prot 86.1 1.1 2.5E-05 42.7 4.6 31 78-108 195-240 (565)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-45 Score=343.30 Aligned_cols=250 Identities=32% Similarity=0.536 Sum_probs=211.4
Q ss_pred cCChhhHHHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---
Q 039228 58 AIPKEYYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--- 134 (356)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--- 134 (356)
....|++.++..+|++|.-.+.||+|+||.||+|....+ ..||||.+........++|.+|+.++.+++|||+|++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 567799999999999999999999999999999999866 8999998875433214569999999999999999987
Q ss_pred -------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEc
Q 039228 135 -------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIG 177 (356)
Q Consensus 135 -------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 177 (356)
+.|+.++|.||+|||+.+.++||||||||+|||||+++++||+
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 4799999999999999988899999999999999999999999
Q ss_pred cccccccccc-CCCCCccCCCCc-cccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccc-cCCccHHHHHH
Q 039228 178 DFELARFRQE-VSNPTQSSSNGV-RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMF-EGDLNLHNFAR 254 (356)
Q Consensus 178 Dfg~a~~~~~-~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~-~~~~~~~~~~~ 254 (356)
|||+|+.... ... .... .||.+|++||+...+..+.++|||||||+++|++||+.|.+... .+...+..|+.
T Consensus 220 DFGLa~~~~~~~~~-----~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTS-----VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred CccCcccCCccccc-----eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 9999975443 111 1111 78999999999999999999999999999999999999987544 33455888887
Q ss_pred HhCC-CchHHHhhhhhc-cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhh
Q 039228 255 MAFP-NRVMDIVNLVLL-NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNI 330 (356)
Q Consensus 255 ~~~~-~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~ 330 (356)
..+. ..+.+++|+.+. ..+.. ..+...+..++.+|++.+|.+||+|.+|+++|+.+...
T Consensus 295 ~~~~~~~~~eiiD~~l~~~~~~~-----------------~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 295 PLLEEGKLREIVDPRLKEGEYPD-----------------EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHCcchhheeCCCccCCCCCh-----------------HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 7664 478899999886 33321 15777899999999999999999999999999666544
No 2
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.1e-43 Score=308.91 Aligned_cols=239 Identities=18% Similarity=0.192 Sum_probs=178.8
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
+.|+.+.++|+|+||.||+++++.||+.||||++-... ....+-.++|+++|++|+|+|+|.+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35888899999999999999999999999999996443 2334567899999999999999998
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.|+.|+|+++ +|||||||+||||+.+|.+||+|||+|+.+...+
T Consensus 82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg--- 155 (396)
T KOG0593|consen 82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPG--- 155 (396)
T ss_pred ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCc---
Confidence 347889999999999999 9999999999999999999999999999876432
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCcc-HHHHHHHhCCCchHHHhhh--h
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLN-LHNFARMAFPNRVMDIVNL--V 268 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~ 268 (356)
...+..+.|.+|+|||.+.+ -.|+..+||||+||++.||++|.+-|.+.++-+.- .....-..+..+..++... .
T Consensus 156 -d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 156 -DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred -chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 23345788999999999988 67999999999999999999999999864432211 1111111122233333221 1
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+.+-.-......+ ......+.....+++++..||+.||++|++-++++.
T Consensus 235 F~Gv~lP~~~~~e-----pLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPE-----PLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCcc-----chhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111000000011 111122345557889999999999999999999975
No 3
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-44 Score=307.62 Aligned_cols=221 Identities=24% Similarity=0.304 Sum_probs=177.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
..+|+++++||+|.||+||++....++..||.|.++.. +....+.+..|+.+|++|+|||||++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 34699999999999999999999999999999998743 23344678899999999999999998
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCC-CcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQ-ELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~-~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
++++.|++.||..+|+.-. .-|+||||||.||+|+.+|.+||+|||++++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 5688999999999998321 1289999999999999999999999999998
Q ss_pred cccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
+... .......+||+.||+||.+.+.+|+.+|||||+||++|||..-++||.+. ++.+......
T Consensus 178 l~s~----~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~------- 241 (375)
T KOG0591|consen 178 LSSK----TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIE------- 241 (375)
T ss_pred hcch----hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHH-------
Confidence 7643 34456689999999999999999999999999999999999999999742 3333222211
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
.++++. --..-....|..|+..|+..||+.||+.-.++..+..
T Consensus 242 -----qgd~~~--------------~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 242 -----QGDYPP--------------LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----cCCCCC--------------CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 111110 0001445577899999999999999996666555544
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-43 Score=326.63 Aligned_cols=225 Identities=28% Similarity=0.413 Sum_probs=179.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccc--hHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA--SKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
..+.+.+.||+|+||+||+|.+..+ ..||||++....... .+.|.+|+.+|.+++|||||++
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 3455666799999999999999843 339999997543222 4689999999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC-ceEEcccccccccccC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL-FAHIGDFELARFRQEV 188 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 188 (356)
+.++.||+.|+.|||+.+. ||||||||+|||++.++ ++||+|||+++.....
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 5689999999999999873 99999999999999997 9999999999865432
Q ss_pred CCCCccCCCCccccccccchhhhc--CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDL--GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
. .......||+.|||||++. ...|+.++||||||+++|||+||+.||...... .... .++.
T Consensus 198 ~----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~--~~~~-----------~v~~ 260 (362)
T KOG0192|consen 198 K----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV--QVAS-----------AVVV 260 (362)
T ss_pred c----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH--HHHH-----------HHHh
Confidence 2 2223378899999999999 568999999999999999999999999864331 1111 1111
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhccc
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLPE 334 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~~ 334 (356)
...... .+..++..+..++..||+.||..||++.+++..|+.+...+...
T Consensus 261 ~~~Rp~------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~ 310 (362)
T KOG0192|consen 261 GGLRPP------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA 310 (362)
T ss_pred cCCCCC------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence 111111 11246678899999999999999999999999999998876543
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-43 Score=330.22 Aligned_cols=212 Identities=21% Similarity=0.264 Sum_probs=176.9
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
..|+..++||+|||+.||.+++..+|..||+|++.+. .....+.+.+|+++.+.|+|||||++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4699999999999999999999999999999999753 34556789999999999999999998
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.||+.||.|||+++ |||||||-.|+|++++.++||+|||+|..+....
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-- 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-- 172 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCcc--
Confidence 348899999999999999 9999999999999999999999999998776432
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......+||+.|.|||++....++..+||||+||+||.||+|++||+.. .+.+.++..-..
T Consensus 173 --Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----------------~vkety~~Ik~~ 233 (592)
T KOG0575|consen 173 --ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----------------TVKETYNKIKLN 233 (592)
T ss_pred --cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----------------hHHHHHHHHHhc
Confidence 3344589999999999999999999999999999999999999999742 122233332222
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
++.. +........+||.++|+.||.+|||+++|+..
T Consensus 234 ~Y~~----------------P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 234 EYSM----------------PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred Cccc----------------ccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2210 01223345789999999999999999999875
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-43 Score=313.96 Aligned_cols=216 Identities=21% Similarity=0.256 Sum_probs=179.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc-CccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++++.++.||+|..|+||+++++.|++.+|+|.+... .....+++.+|+++++..+||+||.+
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 3577788999999999999999999999999999544 34456789999999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
-.|+.++++||.|||+ ++ ||||||||+|||++..|.+||+|||.++.+...
T Consensus 159 YMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred hcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 2478899999999996 77 999999999999999999999999999876532
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
....++||..|||||.+.+..|+.++||||||++++|+++|+.||....... ....++++....+
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~------------~~~~~Ll~~Iv~~ 297 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY------------LDIFELLCAIVDE 297 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC------------CCHHHHHHHHhcC
Confidence 4567899999999999999999999999999999999999999997531111 2333444444433
Q ss_pred ccccccccccchhhhhchhhHH-HHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRL-ECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.++. .+. .+..++.+++..||+.||.+|||+.|+++.
T Consensus 298 ppP~---------------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 298 PPPR---------------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCC---------------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 3221 111 356678999999999999999999999864
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-43 Score=319.74 Aligned_cols=216 Identities=22% Similarity=0.259 Sum_probs=170.3
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc-------chHHHHHHHHHHhhcCCCChHHH---------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG-------ASKSFMAECKALKNICHRNLVRF--------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l--------- 134 (356)
.+.|.+.+.||+|+||.|-+|..+.+++.||||++++.... ....+.+|+++|++|+|||||++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 35688999999999999999999999999999999754211 12235699999999999999997
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC---CceEEccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND---LFAHIGDFELAR 183 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~a~ 183 (356)
.-++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||+|+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccchhh
Confidence 237899999999999999 9999999999999755 789999999999
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcCCCC---CCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCc
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEV---STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNR 260 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 260 (356)
..+. .......+||+.|.|||++.+..+ ..++||||+||+||-+++|.+||........-..+.
T Consensus 328 ~~g~-----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI-------- 394 (475)
T KOG0615|consen 328 VSGE-----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI-------- 394 (475)
T ss_pred cccc-----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH--------
Confidence 7653 344566899999999999987653 347799999999999999999998644332111111
Q ss_pred hHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 261 VMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+.+.+.. ....| .+..++..+||.++|..||++|||+.|++.
T Consensus 395 --------~~G~y~f--------~p~~w----~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 395 --------LKGRYAF--------GPLQW----DRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred --------hcCcccc--------cChhh----hhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 1111110 00111 245556789999999999999999999986
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-42 Score=305.45 Aligned_cols=164 Identities=30% Similarity=0.392 Sum_probs=146.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
.++|+++++||+|+||.||+++.+.+++.+|+|++++.. ....+....|..+|.+++||+||.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 567999999999999999999999999999999997542 3345678899999999999999998
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
.-++.+|+.||.|||+.+ ||||||||+|||||..|+++|+|||+++..-...
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~- 179 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG- 179 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccCC-
Confidence 236778999999999999 9999999999999999999999999998543322
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.....++||+.|||||++.+..|+..+|+||||+++|||++|.+||..
T Consensus 180 ---~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~ 227 (357)
T KOG0598|consen 180 ---DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA 227 (357)
T ss_pred ---CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence 233448999999999999999999999999999999999999999974
No 9
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=319.92 Aligned_cols=233 Identities=27% Similarity=0.395 Sum_probs=185.9
Q ss_pred hHHHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH------
Q 039228 63 YYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------ 134 (356)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------ 134 (356)
...+|....+.+.+...||+|.||+||+|+|- ..||||+++... .+..+.|.+|+..+++-+|-||+-|
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 33667777788899999999999999999996 569999998653 3456789999999999999999976
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
++|+.||++|+.|||.++ |||||||..||++.+++.|||+|||++.
T Consensus 460 p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 460 PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEeccccee
Confidence 669999999999999999 9999999999999999999999999997
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcC---CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCc
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLG---SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNR 260 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 260 (356)
...... .........|...|||||++.. .+|++.+||||||+++|||+||..||.....+...+..-.....++
T Consensus 537 vk~~w~--g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd- 613 (678)
T KOG0193|consen 537 VKTRWS--GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD- 613 (678)
T ss_pred eeeeec--cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc-
Confidence 654442 2334455677889999999863 5799999999999999999999999972221211111000000010
Q ss_pred hHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 261 VMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
+ .....+|++++.+|+..||..++++||.+.+|+.+|+.+..++
T Consensus 614 --------~-------------------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 614 --------L-------------------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred --------c-------------------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 0 0112378889999999999999999999999999999887764
No 10
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-41 Score=309.31 Aligned_cols=241 Identities=23% Similarity=0.292 Sum_probs=179.4
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.+.|+.++.||+|.||.||+|++..+|+.||+|.+.... .+...-..+||.+|++|+||||+++
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 356889999999999999999999999999999997654 4556778899999999999999998
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||.|+|++| |+|||||.+|||||++|.+||+|||+|++.....
T Consensus 196 VFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 196 VFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 348899999999999999 9999999999999999999999999999776544
Q ss_pred CCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-C-CchHHHhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-P-NRVMDIVN 266 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~-~~~~~~~~ 266 (356)
. ...+..+-|++|.|||.+.|. .|+.+.|+||.||||.||++|++.|.+..+-. .+.......- | +..+...+
T Consensus 273 ~---~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve-Ql~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 273 S---APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE-QLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred C---cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH-HHHHHHHHhCCCChhcccccc
Confidence 2 224456779999999999875 69999999999999999999999997643321 2222222221 1 11111111
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
-.....+. ........+.+.. ...+...++|+..+|..||.+|.|+.+++..
T Consensus 349 LP~~~~~k-p~~~y~r~l~E~~----~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 349 LPHATIFK-PQQPYKRRLRETF----KDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CCcccccC-CCCcccchHHHHh----ccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 00000000 0011111222221 1233456789999999999999999988753
No 11
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=313.12 Aligned_cols=243 Identities=22% Similarity=0.288 Sum_probs=187.7
Q ss_pred HhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhc-CCCChHHH---------
Q 039228 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNI-CHRNLVRF--------- 134 (356)
Q Consensus 68 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l--------- 134 (356)
.+...+|..++.||.|+|++|++|+.+.+++.||||++.+. .....+.+..|-.+|.+| .||.|++|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 55678999999999999999999999999999999999643 233345677899999999 79999997
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
..++.+|+.||+|||++| ||||||||+|||||.+|+++|+|||.|+.+.
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 237889999999999999 9999999999999999999999999999875
Q ss_pred cCCCC---------CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC
Q 039228 187 EVSNP---------TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF 257 (356)
Q Consensus 187 ~~~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~ 257 (356)
..... .......++||..|.+||++.....++.+|+|+|||++|+|+.|.+||....+ ...++....
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-yliFqkI~~--- 301 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-YLIFQKIQA--- 301 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-HHHHHHHHH---
Confidence 43322 11122569999999999999999999999999999999999999999974321 111111111
Q ss_pred CCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhcccccc
Q 039228 258 PNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLPETVF 337 (356)
Q Consensus 258 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~~~~~ 337 (356)
++-.+.+ ..++...+|+.+.|..||.+|+|+.+|-+. -+.....|
T Consensus 302 -------l~y~fp~----------------------~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H------pFF~~Vdw 346 (604)
T KOG0592|consen 302 -------LDYEFPE----------------------GFPEDARDLIKKLLVRDPSDRLTSQQIKAH------PFFEGVDW 346 (604)
T ss_pred -------hcccCCC----------------------CCCHHHHHHHHHHHccCccccccHHHHhhC------cccccCCh
Confidence 1111111 222356789999999999999999655432 23444556
Q ss_pred ccCCcCCcccccccc
Q 039228 338 KSLTNNRAPKLKASS 352 (356)
Q Consensus 338 ~~~~~~~~~~~~~~~ 352 (356)
+++-.+..|.+++.-
T Consensus 347 ~nlw~~~PP~l~py~ 361 (604)
T KOG0592|consen 347 ENLWQQTPPKLQPYK 361 (604)
T ss_pred hhhhhcCCCcccCCC
Confidence 666677777766653
No 12
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.7e-40 Score=284.35 Aligned_cols=240 Identities=22% Similarity=0.238 Sum_probs=177.9
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRFI-------------- 135 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~-------------- 135 (356)
.+|...++||+|.||.||+|++..+|+.||||.++.... ......++|++.|+.++|+||+.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 468888999999999999999999999999999975532 2345688999999999999999983
Q ss_pred -----------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 136 -----------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 136 -----------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
.++.+++.||+|||.+. |+||||||.|+|++++|.+||+|||+|+.+.......
T Consensus 82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence 36778999999999999 9999999999999999999999999999876544322
Q ss_pred ccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
. ..+-|.+|+|||.+.|. .|+...||||.||++.||+-|.+-|.+..+ -..+....+..-.....+|-+..-.+
T Consensus 159 ~----~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-idQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 159 T----HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-IDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred c----cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-HHHHHHHHHHcCCCCcccCccccccc
Confidence 1 22669999999998874 599999999999999999999887764322 12233333333222222222222222
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
++...........+.... .+.....+|+..++..||.+|++++|++++
T Consensus 234 dY~~~~~~P~~~~~~lf~----aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFP----AASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccc----cccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 222111111111122222 344556899999999999999999999875
No 13
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-41 Score=315.16 Aligned_cols=220 Identities=24% Similarity=0.396 Sum_probs=179.1
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
+.+++++.||+|.||.||.|.++.+ ..||+|.++.. ....+.|.+|+++|++|+|+|||++
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence 3466788999999999999999855 69999998754 3445789999999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+.++.||+.|++||++++ +|||||.+.|||++++..+||+|||+|+......
T Consensus 284 ~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~--- 357 (468)
T KOG0197|consen 284 PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDE--- 357 (468)
T ss_pred ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCc---
Confidence 679999999999999999 9999999999999999999999999999433221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
........-+.-|.|||.+..+.++.+||||||||+||||+| |+.||..+... +. .+.++...
T Consensus 358 Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-----ev---------~~~le~Gy-- 421 (468)
T KOG0197|consen 358 YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-----EV---------LELLERGY-- 421 (468)
T ss_pred eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-----HH---------HHHHhccC--
Confidence 222333344667999999999999999999999999999999 99998754321 11 11122211
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
.+..+..|+..+.+||..||+.+|++|||+..+...|+.+....
T Consensus 422 ----------------Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 422 ----------------RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred ----------------cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 12223478889999999999999999999999999998887643
No 14
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=301.43 Aligned_cols=228 Identities=21% Similarity=0.279 Sum_probs=177.6
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
..++|++..+||.|.-++||+|+...++..||||+++.+.. ...+.+.+|+..|+.++||||+++
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 35789999999999999999999999999999999986543 335889999999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..|+++++.||.|||.+| .||||||+.||||+++|.+||+|||.+..+....
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 237789999999999999 9999999999999999999999999988776554
Q ss_pred CCCccCCCCccccccccchhhhcC--CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLG--SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.........++||+.|||||++.. ..|+.|+||||||++..||.+|..||.....-..-+... ....|.......+
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL-qn~pp~~~t~~~~- 258 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL-QNDPPTLLTSGLD- 258 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh-cCCCCCcccccCC-
Confidence 333333377899999999999643 569999999999999999999999997432211111110 0000000000000
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+........+.+++..||..||.+|||++++++.
T Consensus 259 ---------------------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 259 ---------------------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ---------------------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 01112334478899999999999999999999863
No 15
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-41 Score=301.94 Aligned_cols=164 Identities=31% Similarity=0.475 Sum_probs=147.2
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
..++|.+.+.||+|+||+||+|+++.++..||||.+.+. .....+.+..|+.+|+.++|||||++
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 357899999999999999999999999999999999765 45556778899999999999999998
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC------CceEEcccccccc
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND------LFAHIGDFELARF 184 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~------~~~kl~Dfg~a~~ 184 (356)
..++.|++.||++||+++ ||||||||+||||+.. -.+||+|||+|+.
T Consensus 88 MEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 337789999999999999 9999999999999764 4689999999998
Q ss_pred cccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
+.. .......+|++.|||||++....|+.|+|+||+|+++|+|++|+.||+.
T Consensus 165 L~~-----~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 165 LQP-----GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred CCc-----hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 763 3445568999999999999999999999999999999999999999974
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-41 Score=307.45 Aligned_cols=236 Identities=19% Similarity=0.220 Sum_probs=177.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchH-HHHHHHHHHhhcC-CCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK-SFMAECKALKNIC-HRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~l-------------- 134 (356)
-++|.+++.||.|.||.||+|+...++..||||.++.......+ .-++|+..|++|+ |||||++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 45799999999999999999999999999999999755333222 2468999999999 9999998
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..|+.||++||+|+|.+| +.|||+||+|||+.....+||+|||+|+.....
T Consensus 89 fE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk-- 163 (538)
T KOG0661|consen 89 FEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRSK-- 163 (538)
T ss_pred HHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccccC--
Confidence 458899999999999999 999999999999999999999999999976542
Q ss_pred CCccCCCCccccccccchhhhc-CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-CC---ch--HH
Q 039228 191 PTQSSSNGVRRTIGYTALDYDL-GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-PN---RV--MD 263 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~---~~--~~ 263 (356)
...+..+.|.+|+|||++. .+-|+.+.|||++||+++|+.+-++-|.+..+-+... ....-.- |. +. ..
T Consensus 164 ---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~-KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 164 ---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIY-KICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred ---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHH-HHHHHhCCCccccchhHHH
Confidence 3344578899999999876 4678999999999999999999999998765433221 1111111 11 11 11
Q ss_pred HhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 264 IVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 264 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+... +.-..+ .+...........+..+..+|+.+|+++||++||||+++++.
T Consensus 240 La~~-mnf~~P-------~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 LASA-MNFRFP-------QVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHH-hccCCC-------cCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111 111110 111111111222455677899999999999999999999875
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=301.12 Aligned_cols=226 Identities=23% Similarity=0.308 Sum_probs=175.1
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
..++...+.||+|+||.||++.+..++...|||.+........+.+.+|+.+|.+++|||||++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 3458888999999999999999998899999999876543346778999999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC-CCceEEcccccccccccCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN-DLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~ 189 (356)
..+..||+.||.|||++| ||||||||+|||++. ++.+||+|||+++.... .
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~-~ 171 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES-K 171 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc-c
Confidence 347789999999999999 999999999999999 79999999999987664 1
Q ss_pred CCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
...........||+.|||||++.++ ....++|||||||++.||+||+.||..... .............
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~---~~~~~~~ig~~~~-------- 240 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE---EAEALLLIGREDS-------- 240 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc---hHHHHHHHhccCC--------
Confidence 1222334458899999999999853 334599999999999999999999975311 0011111111000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhh
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNI 330 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~ 330 (356)
. +..+...+....+++..|+..||+.||||++++....-....
T Consensus 241 -~------------------P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 241 -L------------------PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred -C------------------CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 0 011113344567999999999999999999999876554433
No 18
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.3e-40 Score=305.63 Aligned_cols=212 Identities=26% Similarity=0.361 Sum_probs=176.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+... ...+.+.+|+++++.++|||||.+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 578999999999999999999999999999999975533 345678999999999999999998
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.+++.||.|||+.+ |+|||+||.|||++.+|.+|++|||+|+.+... .
T Consensus 82 ~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~----t 154 (808)
T KOG0597|consen 82 YAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN----T 154 (808)
T ss_pred hhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccC----c
Confidence 347889999999999999 999999999999999999999999999976542 3
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDN 273 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 273 (356)
.....+.||+.|||||...+.+|+..+|+||+||++|||++|++||-. ..+.+++...+..+.
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----------------~si~~Lv~~I~~d~v 217 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----------------RSITQLVKSILKDPV 217 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----------------HHHHHHHHHHhcCCC
Confidence 445568899999999999999999999999999999999999999952 122233332222221
Q ss_pred ccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 274 KVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.. +.+....+.+++...|..||..|.++.+++..
T Consensus 218 ~~----------------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 KP----------------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred CC----------------cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 10 01344457889999999999999999999864
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=300.94 Aligned_cols=215 Identities=21% Similarity=0.255 Sum_probs=179.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
..|.....||+|+.|.||.|....+++.||||.+........+-+++|+.+|+..+|+|||.+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 457888899999999999999999999999999998877777789999999999999999998
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..||++++.||+|||.+| |+|||||.+|||++.+|.+||+|||++..+.... ..
T Consensus 353 ~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~----~K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ----SK 425 (550)
T ss_pred CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc----Cc
Confidence 248899999999999999 9999999999999999999999999998765443 24
Q ss_pred CCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
....+||+.|||||+.....|+++.||||||++++||+-|.+||-. +..+.......-.+. +.+
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLIa~ng~------P~l------ 489 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLIATNGT------PKL------ 489 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHHhhcCC------CCc------
Confidence 5668999999999999999999999999999999999999999853 222322221111110 000
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.........+.+++.+||..|+++||++.+||+.
T Consensus 490 --------------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 490 --------------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred --------------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1112445578899999999999999999999973
No 20
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=288.76 Aligned_cols=243 Identities=21% Similarity=0.206 Sum_probs=177.5
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEee--ccCccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLS--IQCQGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
....|..++.||+|+||.|+.|.+..+|+.||||.+. .......++..+|+++|+.++|+||+.+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3556777899999999999999999999999999987 4455667889999999999999999976
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
-.++.|+++||.|+|+.+ |+||||||+|++++.++.+||+|||+|+...
T Consensus 100 DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceeecc
Confidence 126789999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCccCCCCccccccccchhhhc-CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC----ch
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDL-GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN----RV 261 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~----~~ 261 (356)
.. ......+..+.|.+|.|||.+. ...|+.+.||||.|||+.||++|++-|.+...- .-........+. .+
T Consensus 177 ~~--~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v--~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 177 KF--FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV--HQLQLILELLGTPSEEDL 252 (359)
T ss_pred cc--CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH--HHHHHHHHhcCCCCHHHH
Confidence 54 2334446688899999999875 467999999999999999999999999753221 111111111111 11
Q ss_pred HHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 262 MDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 262 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
..+-+..........+.....-.....+ ......++|+.+||..||.+|+|++|.++.
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp----~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFP----NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcC----CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111111110000000011111111112 223345789999999999999999998863
No 21
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=294.19 Aligned_cols=213 Identities=22% Similarity=0.262 Sum_probs=173.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRFIS-------------- 136 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~-------------- 136 (356)
..|+..+.||+|.||.||+|.+..+++.||+|++...... ..+.+.+|+.+|..++++||.+++.
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3477789999999999999999999999999999866443 4577889999999999999988722
Q ss_pred -----------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 137 -----------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 137 -----------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
++++++.||.|||.++ .+|||||+.|||+..+|.+||+|||++..+....
T Consensus 93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~---- 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV---- 165 (467)
T ss_pred hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh----
Confidence 6678999999999999 9999999999999999999999999998665432
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDN 273 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 273 (356)
.....++||+.|||||++.+..|+.++||||||++.+||++|.+|+....... +...++.+. .|.+.+
T Consensus 166 ~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr------vlflIpk~~----PP~L~~-- 233 (467)
T KOG0201|consen 166 KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR------VLFLIPKSA----PPRLDG-- 233 (467)
T ss_pred hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce------EEEeccCCC----CCcccc--
Confidence 33367999999999999998899999999999999999999999987533211 000111111 111111
Q ss_pred ccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 274 KVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+...+.+++..||+.||+.||+|.++++.
T Consensus 234 --------------------~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 234 --------------------DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred --------------------ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 233457899999999999999999999863
No 22
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.1e-39 Score=283.09 Aligned_cols=242 Identities=22% Similarity=0.251 Sum_probs=175.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.+.|+.++.|++|.||.||+|+++.+++.||+|+++... ....-..++||.+|.+.+|||||.+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 456999999999999999999999999999999997543 2333457899999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..+..|++.||+|||.+. |+|||||++|+|+.+.|.+||+|||+|+..+...
T Consensus 155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 236789999999999999 9999999999999999999999999999776542
Q ss_pred CCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHh-CCC-chHHHhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA-FPN-RVMDIVN 266 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~-~~~~~~~ 266 (356)
...+..+-|++|+|||.+.+. .|++..|+||+|||+.||+++++-|.+..+-+ .+....... .|. .++.-++
T Consensus 232 ----k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d-Ql~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 232 ----KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID-QLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred ----ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH-HHHHHHHHhCCCccccCCCcc
Confidence 234456779999999999875 58999999999999999999999998654432 222222222 121 1111000
Q ss_pred hh-hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 267 LV-LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 267 ~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.. ..+.. .........++..+.... ..+.-.+|+...+..||.+|.|+++.++.
T Consensus 307 ~lp~~k~~-~f~~~pyn~lr~kF~~~~--lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 307 ELPAVKKM-TFSEHPYNNLRKKFGALS--LSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccchhhcc-ccCCCCchhhhhhccccc--cchhHHHHHHHHhccCccccccHHHhhcc
Confidence 00 00000 000011111111111111 22345788999999999999999998763
No 23
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-39 Score=294.39 Aligned_cols=223 Identities=24% Similarity=0.249 Sum_probs=174.4
Q ss_pred HhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--------------ccchHHHHHHHHHHhhcCCCChHH
Q 039228 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--------------QGASKSFMAECKALKNICHRNLVR 133 (356)
Q Consensus 68 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~E~~~l~~l~h~niv~ 133 (356)
.+..+.|++...||+|.||.|-+|++..+++.||||++.+.. ....+...+|+.+|+++.|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345688999999999999999999999999999999996431 122357889999999999999999
Q ss_pred H---------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCce
Q 039228 134 F---------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA 174 (356)
Q Consensus 134 l---------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 174 (356)
| ..++.+++.||+|||.+| ||||||||+|+||+++|.+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcE
Confidence 8 458999999999999999 9999999999999999999
Q ss_pred EEcccccccccccCCC-CCccCCCCccccccccchhhhcCCC----CCCccchHhHHHHHHHHHcCCCCCCccccCCccH
Q 039228 175 HIGDFELARFRQEVSN-PTQSSSNGVRRTIGYTALDYDLGSE----VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNL 249 (356)
Q Consensus 175 kl~Dfg~a~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~ 249 (356)
||+|||.+........ .........+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||...+.
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----- 324 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----- 324 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH-----
Confidence 9999999986643322 1122334588999999999987633 34678999999999999999999963211
Q ss_pred HHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 250 HNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
... ...+++..+.-. ..++.-+.+.+|+.++|..||+.|.+..+|....
T Consensus 325 ~~l--------~~KIvn~pL~fP------------------~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 325 LEL--------FDKIVNDPLEFP------------------ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred HHH--------HHHHhcCcccCC------------------CcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 111 112222222100 1113445678999999999999999998886544
No 24
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.2e-38 Score=298.64 Aligned_cols=224 Identities=22% Similarity=0.300 Sum_probs=170.2
Q ss_pred hcCCCCccccceecCceEEEEEEEC-----CCCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHHH-------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFD-----LNRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRFI------- 135 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~------- 135 (356)
..++|++.+.||+|+||.||+|.+. .++..||+|++.... ....+.+.+|+.++..+ +||||++++
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 3567999999999999999999852 345789999987432 23346788999999999 899998751
Q ss_pred --------------------------------------------------------------------------------
Q 039228 136 -------------------------------------------------------------------------------- 135 (356)
Q Consensus 136 -------------------------------------------------------------------------------- 135 (356)
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence
Q ss_pred -------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCcccc
Q 039228 136 -------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRT 202 (356)
Q Consensus 136 -------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt 202 (356)
.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....... ........++
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~~~ 239 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKGSARLP 239 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcc--hhcccCCCCC
Confidence 14569999999999999 99999999999999999999999999976532211 1112234456
Q ss_pred ccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccccccc
Q 039228 203 IGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNS 281 (356)
Q Consensus 203 ~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 281 (356)
..|+|||++.+..++.++|||||||++|||++ |..||....... .+.. ....+ ... .
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~---~~~~~--------~~~-~--------- 297 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQ---RLKDG--------TRM-R--------- 297 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHH---HHhcC--------CCC-C---------
Confidence 78999999999899999999999999999997 999997432111 1111 00000 000 0
Q ss_pred chhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhh
Q 039228 282 NMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNN 329 (356)
Q Consensus 282 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~ 329 (356)
.+..++..+.+|+.+||+.||++|||+.+|++.|+.+..
T Consensus 298 ---------~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 298 ---------APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ---------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 001233467899999999999999999999999998765
No 25
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.7e-38 Score=297.15 Aligned_cols=233 Identities=19% Similarity=0.195 Sum_probs=168.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|+||.||+|++..++..||||.+... .......+.+|+.+++.++||||+++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 488899999999999999999999999999998643 22334568899999999999999875
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 81 VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 347789999999999999 9999999999999999999999999997543222
Q ss_pred CCCccCCCCccccccccchhhhcC--CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCc----hH-
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLG--SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNR----VM- 262 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~----~~- 262 (356)
.. ........||..|+|||++.+ ..++.++|||||||++|||++|++||..... .............. ..
T Consensus 158 ~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 158 PT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred Cc-cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHH
Confidence 11 112234678999999999865 6789999999999999999999999964321 11111111111000 00
Q ss_pred -------HHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 263 -------DIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 263 -------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
..+......... -... ........+.+++.+||+.||++|||++++++.
T Consensus 235 i~~~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPV--------PFSQ----KFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhhhHHHHHHhhcccCCC--------chHH----hcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 011100000000 0000 001123456899999999999999999999864
No 26
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.5e-38 Score=293.76 Aligned_cols=226 Identities=22% Similarity=0.338 Sum_probs=173.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCe----EEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRA----VVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
..+|++.+.||+|+||.||+|.+..++. .||+|.++... ....+.+..|+.+++.++||||+++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~ 85 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 85 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCcee
Confidence 3569999999999999999999865544 48999986443 3345678899999999999999987
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
+.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccCC
Confidence 457889999999999999 999999999999999999999999999876433
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
... .......++..|+|||++.+..++.++||||||+++|||++ |..||...... .+.. ++..
T Consensus 163 ~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~------------~~~~ 226 (316)
T cd05108 163 EKE--YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS------------ILEK 226 (316)
T ss_pred Ccc--eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHH------------HHhC
Confidence 221 11122334678999999999999999999999999999998 99998642111 1111 1111
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhcc
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLP 333 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~ 333 (356)
..... .+..+...+.+++.+||+.+|++||++.+++..|..+...-..
T Consensus 227 ~~~~~------------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~ 274 (316)
T cd05108 227 GERLP------------------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 274 (316)
T ss_pred CCCCC------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCch
Confidence 00000 0012334578999999999999999999999999888765433
No 27
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=8.7e-38 Score=285.83 Aligned_cols=240 Identities=19% Similarity=0.232 Sum_probs=172.2
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46999999999999999999999999999999987542 2334678899999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 155 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-- 155 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccccc--
Confidence 347889999999999999 99999999999999999999999999986533221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHh--CCCchHHHh--hhh
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA--FPNRVMDIV--NLV 268 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~ 268 (356)
.......|+..|+|||++.+..++.++|||||||++|||++|++||......+ .+....... .+....... ++.
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 156 -ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred -ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCCCCHHHHHhhhccch
Confidence 12234568999999999998889999999999999999999999997532211 111111110 111100000 000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
............... ...........+.+++.+||+.||++|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~----~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSL----ERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccH----HHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000000000 00001123456899999999999999999999875
No 28
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-38 Score=294.20 Aligned_cols=219 Identities=21% Similarity=0.262 Sum_probs=173.7
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc----Cc-cchHHHHHHHHHHhhcC-CCChHHH--------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ----CQ-GASKSFMAECKALKNIC-HRNLVRF-------- 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l-------- 134 (356)
...+.|.+.+.||+|+||.|+.|.+..++..||+|++... .. ...+.+.+|+.++++++ ||||+++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3467899999999999999999999999999999987653 12 23456778999999999 9999987
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC-CceEEcccccccc
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND-LFAHIGDFELARF 184 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~a~~ 184 (356)
..++.|++.|++|+|++| |+||||||+|||++.+ +++||+|||++..
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 348999999999999999 9999999999999999 9999999999987
Q ss_pred cccCCCCCccCCCCccccccccchhhhcCCC-CC-CccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchH
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLGSE-VS-TNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVM 262 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 262 (356)
.. .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+. ..........
T Consensus 171 ~~----~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-----~~~~~l~~ki------ 235 (370)
T KOG0583|consen 171 SP----GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-----SNVPNLYRKI------ 235 (370)
T ss_pred cC----CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----ccHHHHHHHH------
Confidence 63 1133455689999999999999877 75 789999999999999999999974 1111111111
Q ss_pred HHhhhhhccccccccccccchhhhhchhhHHHH-HHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 263 DIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLEC-LIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 263 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
..+.+.. +... ...+..|+.+|+..||.+|+|+.+++ .-.-+.
T Consensus 236 ------~~~~~~~----------------p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 236 ------RKGEFKI----------------PSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred ------hcCCccC----------------CCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 1111100 0011 23567999999999999999999999 433333
No 29
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.3e-38 Score=288.53 Aligned_cols=241 Identities=23% Similarity=0.291 Sum_probs=168.4
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.++|++.+.||.|+||.||+|....+++.||+|++..... .....+.+|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 4689999999999999999999998999999999875432 223467789999999999999986
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 157 (303)
T cd07869 84 YVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--- 157 (303)
T ss_pred CCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC---
Confidence 347789999999999999 9999999999999999999999999987543221
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh----h
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN----L 267 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 267 (356)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.........+..............+.. +
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 158 -HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred -ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 12233567899999999865 45788999999999999999999999753221111111111110000000000 0
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
....+.. ....+......+.. ......+.+++.+||+.||.+|||+.++++
T Consensus 237 ~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERF--TLYSPKNLRQAWNK--LSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccc--cccCCccHHHHhhc--cCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000 00000000000000 011235678999999999999999999985
No 30
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=270.31 Aligned_cols=228 Identities=18% Similarity=0.193 Sum_probs=181.6
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
..++|.+.+.||.|||+.||++....++..+|+|++.....+..+...+|++..++++|||++++
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45789999999999999999999999999999999988877788899999999999999999998
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
+.|+.++++||.+||+.. +++.||||||.|||+.+.+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 458899999999999985 679999999999999999999999999987
Q ss_pred ccccCCCC-----CccCCCCccccccccchhhhc---CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHH
Q 039228 184 FRQEVSNP-----TQSSSNGVRRTIGYTALDYDL---GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255 (356)
Q Consensus 184 ~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~ 255 (356)
........ ..........|..|+|||.+. +...+.++|||||||++|+|+.|..||+.....+.++.-.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA--- 254 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA--- 254 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe---
Confidence 54221110 111122344688999999885 4557899999999999999999999998766544332111
Q ss_pred hCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 256 AFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 256 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
+.+..+.- ++.. ...+.+.+++..|++.||.+||++.+|+..++.+
T Consensus 255 --------v~n~q~s~-----------------P~~~-~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 255 --------VQNAQISI-----------------PNSS-RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred --------eecccccc-----------------CCCC-CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11111100 0000 2445788999999999999999999999998764
No 31
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.2e-38 Score=298.00 Aligned_cols=234 Identities=19% Similarity=0.220 Sum_probs=169.4
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||+|+||.||+|.+..+++.||+|... ...+.+|+.++++++||||+++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 367999999999999999999999999999999753 2456789999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
+.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 165 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~---~~ 238 (391)
T PHA03212 165 YKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN---AN 238 (391)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc---cc
Confidence 457889999999999999 9999999999999999999999999997533221 11
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccC--C----ccHHHHHHHhC------CCchH
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEG--D----LNLHNFARMAF------PNRVM 262 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~--~----~~~~~~~~~~~------~~~~~ 262 (356)
......||+.|+|||++.+..++.++|||||||++|||++|..||...... . ..+........ +....
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 223467899999999999999999999999999999999999887432211 0 11111111110 10000
Q ss_pred HHhhhhh---ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 263 DIVNLVL---LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 263 ~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..++... .......... ..........+..+.+|+.+||+.||.+|||+.++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGS------RPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHHhccCCCCCC------CCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0011000 0000000000 0001111234557889999999999999999999985
No 32
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-38 Score=279.91 Aligned_cols=233 Identities=21% Similarity=0.192 Sum_probs=170.7
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH------------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------------ 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------------ 134 (356)
.|...+++|+|+||.||+|...++++.||||..-.... ---+|+.+|+.++|||||++
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 37778899999999999999999999999999754322 12369999999999999987
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC-CceEEcccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND-LFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~ 186 (356)
.-+..||.+||.|||+.+ |+||||||+|+|+|.+ |.+||+|||.|+.+.
T Consensus 101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 116779999999999999 9999999999999955 999999999999876
Q ss_pred cCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
..... .....|..|+|||.+.+ ..|+.+.||||.||++.||+.|++-|.+.. +...+...+...-...-.++-
T Consensus 178 ~~epn-----iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 178 KGEPN-----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred cCCCc-----eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHHHHhCCCCHHHHh
Confidence 54322 34677999999999887 469999999999999999999999998632 223444444443322222221
Q ss_pred hhhhccccccccccccchhhhhchh-hHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMN-SRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
. +. ..+. .-..+++....+.. .......+..+++.+++.++|.+|.++.+++.
T Consensus 252 ~-mn-~~y~--~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 252 S-MN-PNYT--EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred h-cC-cccc--cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 1 10 0000 00011111111111 11134446789999999999999999998875
No 33
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=297.49 Aligned_cols=210 Identities=22% Similarity=0.241 Sum_probs=173.2
Q ss_pred HhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcC-CCChHHH---------
Q 039228 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNIC-HRNLVRF--------- 134 (356)
Q Consensus 68 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l--------- 134 (356)
....++|.++++||+|+||.|++|..+.+++.+|||++++. .....+....|.+++.-.. ||.++.+
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 34567899999999999999999999999999999999865 3455677888988888775 9999998
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.+++.||.|||+++ |||||||.+|||||..|++||+|||+++....
T Consensus 444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccccCC
Confidence 337889999999999999 99999999999999999999999999985432
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
. .....+++||+.|+|||++.+..|+.++|.|||||+|||||.|..||.+..++ ++.|.
T Consensus 521 ~----g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----------------e~Fds 579 (694)
T KOG0694|consen 521 Q----GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----------------EVFDS 579 (694)
T ss_pred C----CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----------------HHHHH
Confidence 2 23556799999999999999999999999999999999999999999753322 23333
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCCh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNV 317 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 317 (356)
.+..+... +.-+..+.++++.+.+..||++|-.+
T Consensus 580 I~~d~~~y----------------P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 580 IVNDEVRY----------------PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HhcCCCCC----------------CCcccHHHHHHHHHHhccCcccccCC
Confidence 33322210 11344456889999999999999866
No 34
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-38 Score=316.37 Aligned_cols=221 Identities=23% Similarity=0.317 Sum_probs=171.0
Q ss_pred HhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 68 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+...+|+.++.||+||||.||+++++-+|+.||||++.... ......+.+|+.+|.+|+|||+|++
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 356778999999999999999999999999999999997553 3344678899999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 039228 135 -------------------------------------------------------------------------------- 134 (356)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (356)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -----------------------------------------------------------------HHHHHHHHHHHHHHh
Q 039228 135 -----------------------------------------------------------------ISIAIDVASALDYLH 149 (356)
Q Consensus 135 -----------------------------------------------------------------~~i~~~i~~aL~~LH 149 (356)
+.++.+|+.||+|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 558899999999999
Q ss_pred hcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc--------------cCCCCCccCCCCccccccccchhhhcCCC
Q 039228 150 HHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ--------------EVSNPTQSSSNGVRRTIGYTALDYDLGSE 215 (356)
Q Consensus 150 ~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~--------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 215 (356)
++| ||||||||.||++|+++.+||+|||+|+... ..........+..+||.-|+|||++.+..
T Consensus 715 ~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 999 9999999999999999999999999998621 00111223446688999999999997654
Q ss_pred ---CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhH
Q 039228 216 ---VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSR 292 (356)
Q Consensus 216 ---~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 292 (356)
|+.|+|||||||+++||+. ||....+....+.......+|.. .++.++.
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~------------------------ 843 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPE------------------------ 843 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-ccccccc------------------------
Confidence 9999999999999999985 56543222222222222222222 1111111
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 293 LECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 293 ~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
...=.++|.++++.||.+||||.||+.
T Consensus 844 ---~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 844 ---HPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ---chHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 112268999999999999999999985
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.3e-37 Score=284.02 Aligned_cols=209 Identities=22% Similarity=0.256 Sum_probs=165.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++.++||||+++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46899999999999999999999999999999986432 2234568889999999999999997
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--- 154 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC---
Confidence 347789999999999999 999999999999999999999999999755321
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.....|++.|+|||++.+..++.++|||||||++|+|++|+.||..... ...... +.....
T Consensus 155 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~--------i~~~~~-- 215 (291)
T cd05612 155 ----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEK--------ILAGKL-- 215 (291)
T ss_pred ----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH--------HHhCCc--
Confidence 1235689999999999998899999999999999999999999964221 111111 000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC-----hHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN-----VPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~~vl~~ 323 (356)
... ......+.+++.+||+.||.+||+ ++++++.
T Consensus 216 ~~~------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 EFP------------------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred CCC------------------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 000 012235679999999999999995 7777644
No 36
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.8e-37 Score=289.08 Aligned_cols=243 Identities=19% Similarity=0.214 Sum_probs=169.1
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHHH-----------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRFI----------- 135 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~----------- 135 (356)
...++|.+.+.||+|+||.||+|.+..+++.||||.+..... ...+.+.+|+.+++.++||||++++
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 346789999999999999999999999999999999864322 2345677899999999999999872
Q ss_pred ------------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccc
Q 039228 136 ------------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR 185 (356)
Q Consensus 136 ------------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 185 (356)
.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred cCcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccceec
Confidence 36789999999999999 999999999999999999999999999754
Q ss_pred ccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 186 QEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
... .....||..|+|||++.+ ..++.++|||||||++|+|++|+.||...... ..+..+..... ......
T Consensus 169 ~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~-~~~~~~ 239 (343)
T cd07878 169 DDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVG-TPSPEV 239 (343)
T ss_pred CCC-------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhC-CCCHHH
Confidence 321 223567999999999876 56889999999999999999999999642211 11111111110 000011
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
................+.................+.+++.+||+.||++|||+.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 10000000000000000000000000000112346799999999999999999999964
No 37
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.8e-37 Score=284.31 Aligned_cols=242 Identities=23% Similarity=0.291 Sum_probs=168.3
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.++|.+.+.||.|+||.||+|....++..||+|++..... .....+.+|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 4579999999999999999999999999999999875432 234567899999999999999986
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~--- 157 (288)
T cd07871 84 YLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT--- 157 (288)
T ss_pred CCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC---
Confidence 347789999999999999 9999999999999999999999999997543221
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||....... .+...... ......+........
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~ 234 (288)
T cd07871 158 -KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRL-LGTPTEETWPGITSN 234 (288)
T ss_pred -ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH-hCCCChHHhhccccc
Confidence 12233567899999998865 568899999999999999999999996432111 11111111 111000000000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.... ....+...................+++.+||..||.+|||+.|+++
T Consensus 235 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 235 EEFR-SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhh-ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000 0000000000000000112335679999999999999999999974
No 38
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=9.3e-38 Score=279.02 Aligned_cols=244 Identities=24% Similarity=0.277 Sum_probs=175.9
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCC-hHHH---------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRN-LVRF--------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l--------------- 134 (356)
.|..++.||+|.||+||+|+.+.+|+.||+|.+..... .......+|+.+|++++|+| |+++
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 47777889999999999999999999999999976543 34566789999999999999 8876
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
..+..||+.||+|||+++ |+||||||+||||+.+|.+||+|||+|+
T Consensus 92 l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 92 LYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred EEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHH
Confidence 247789999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchH
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVM 262 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 262 (356)
..... .......++|..|.|||++.+. .|++..||||+||+++||+++++-|.+..+-+ .+....+..-..+..
T Consensus 169 a~~ip----~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 169 AFSIP----MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNEK 243 (323)
T ss_pred HhcCC----cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCcc
Confidence 55422 2234557789999999999987 69999999999999999999999988655422 122222211111111
Q ss_pred HHhhhhhcccccc--ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH--HHHhh
Q 039228 263 DIVNLVLLNDNKV--LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD--LQSVN 328 (356)
Q Consensus 263 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~--L~~i~ 328 (356)
.|-.-...+++.. .......-+....+ .......+++.+|++.+|.+|.|+...+.+ +..+.
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~----~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILP----KLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhcc----ccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 1100000011110 00000000111111 111356789999999999999999999886 54443
No 39
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=273.06 Aligned_cols=161 Identities=27% Similarity=0.296 Sum_probs=145.7
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
.++|++++.||.|+||.|.+++.+.++..+|+|++++.. ....+...+|..+|+.+.||+++++
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 467999999999999999999999999999999997553 3445677899999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+|+.||+|||+.+ |++|||||+|||||.+|.+||+|||+|+.+...
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-- 197 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-- 197 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc--
Confidence 348889999999999999 999999999999999999999999999976432
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.-..+||+.|+|||++...+++.++|.|||||++|||+.|.+||..
T Consensus 198 -----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~ 243 (355)
T KOG0616|consen 198 -----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYD 243 (355)
T ss_pred -----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcC
Confidence 3358899999999999999999999999999999999999999964
No 40
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.8e-37 Score=281.98 Aligned_cols=231 Identities=23% Similarity=0.277 Sum_probs=164.6
Q ss_pred CCCCccccceecCceEEEEEEECC-CCeEEEEEEeeccCc--cchHHHHHHHHHHhhc---CCCChHHH-----------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDL-NRAVVAIKVLSIQCQ--GASKSFMAECKALKNI---CHRNLVRF----------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l----------- 134 (356)
++|++.+.||+|+||.||+|++.. ++..||+|.+..... .....+.+|+.+++.+ +||||+++
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 368999999999999999999854 568899999874422 2234566777777665 69999875
Q ss_pred --------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccc
Q 039228 135 --------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELA 182 (356)
Q Consensus 135 --------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 182 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccce
Confidence 347889999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-CC--
Q 039228 183 RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-PN-- 259 (356)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~-- 259 (356)
+..... .......|++.|+|||.+.+..++.++|||||||++|||++|.+||......+ .+........ +.
T Consensus 158 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~ 231 (290)
T cd07862 158 RIYSFQ-----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEE 231 (290)
T ss_pred EeccCC-----cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChh
Confidence 765322 22234568999999999998899999999999999999999999997532211 1111111110 00
Q ss_pred chHHHh---hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 260 RVMDIV---NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 260 ~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
...... ...+... ....... ........+.+++.+||+.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 232 DWPRDVALPRQAFHSK-------SAQPIEK----FVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hchhhhcccchhccCC-------CCCCHHH----HccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000 0000000 0000000 01123345679999999999999999999985
No 41
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.2e-37 Score=291.44 Aligned_cols=165 Identities=25% Similarity=0.250 Sum_probs=142.7
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
..++|++.+.||+|+||.||+|.+..++..||+|++... .......+.+|+.+++.++||||+++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 357899999999999999999999999999999998643 23345678899999999999999976
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 99 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred ceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 236789999999999999 99999999999999999999999999975432
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
. .......+|..|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 176 ~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 176 N-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred C-----ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 1 1223356789999999999999999999999999999999999999753
No 42
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.4e-38 Score=263.81 Aligned_cols=212 Identities=19% Similarity=0.231 Sum_probs=173.6
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHHH-----------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRFI----------- 135 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~----------- 135 (356)
..++|++.+.||+|.||.||+|+.+.++..||+|++.++ ......++.+|+++.+.|+||||++++
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 357899999999999999999999999999999998644 233456788999999999999999983
Q ss_pred ----------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 136 ----------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 136 ----------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
.+..|++.||.|+|..+ ||||||||+|+|++..+.+||+|||.+..-.
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 37789999999999988 9999999999999999999999999986432
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.......+||..|.+||...+..++..+|+|++|++.||++.|.+||..... +.-..+.....+ ..+
T Consensus 176 -----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-~etYkrI~k~~~-------~~p 242 (281)
T KOG0580|consen 176 -----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-SETYKRIRKVDL-------KFP 242 (281)
T ss_pred -----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-HHHHHHHHHccc-------cCC
Confidence 2344568899999999999999999999999999999999999999975432 111121111111 111
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
........++|..|+..+|.+|.+..|+++.
T Consensus 243 -------------------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 -------------------------STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -------------------------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1233356799999999999999999998763
No 43
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.8e-37 Score=289.76 Aligned_cols=164 Identities=26% Similarity=0.263 Sum_probs=142.5
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
..++|++.+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999999899999999987432 2334678889999999999999876
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred ceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 236789999999999999 99999999999999999999999999975432
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
. .......+|..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 172 ~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 172 S-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred c-----cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 2 122345689999999999998999999999999999999999999964
No 44
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.5e-37 Score=282.93 Aligned_cols=213 Identities=21% Similarity=0.232 Sum_probs=164.6
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.++|+||+++
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3778899999999999999999999999999986432 2223457889999999999999876
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 347789999999999999 9999999999999999999999999997643221
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
......||..|+|||++.+..++.++|||||||++|+|++|+.||....... ..... +..+.
T Consensus 157 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~-------------~~~~~ 218 (285)
T cd05631 157 ----TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEV-------------DRRVK 218 (285)
T ss_pred ----eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHH-------------HHHhh
Confidence 1223568999999999999999999999999999999999999997532211 00010 00000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC-----hHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN-----VPNAVH 322 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~~vl~ 322 (356)
.... .........+.+|+.+||+.||.+||+ ++++++
T Consensus 219 ~~~~---------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 219 EDQE---------------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cccc---------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 0000 000022335789999999999999997 677765
No 45
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.8e-37 Score=284.21 Aligned_cols=226 Identities=20% Similarity=0.292 Sum_probs=167.1
Q ss_pred cCCCCccccceecCceEEEEEEECC----------------CCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHH
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL----------------NRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVR 133 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 133 (356)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.+..... .....+.+|+.++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578999999999999999998642 345799999875432 33457889999999999999987
Q ss_pred H--------------------------------------------------------HHHHHHHHHHHHHHhhcCCCcEE
Q 039228 134 F--------------------------------------------------------ISIAIDVASALDYLHHHCQELIL 157 (356)
Q Consensus 134 l--------------------------------------------------------~~i~~~i~~aL~~LH~~~~~~ii 157 (356)
+ +.++.||+.||.|||+.+ |+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence 5 147889999999999999 99
Q ss_pred ecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc--C
Q 039228 158 HCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT--R 235 (356)
Q Consensus 158 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt--g 235 (356)
||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++ +
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY--YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce--eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 999999999999999999999999975533221 112223445778999999988899999999999999999987 5
Q ss_pred CCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC
Q 039228 236 RKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM 315 (356)
Q Consensus 236 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 315 (356)
..||...... .........+...... ... .....++..+.+++.+||+.||++||
T Consensus 239 ~~p~~~~~~~--~~~~~~~~~~~~~~~~----~~~-------------------~~~~~~~~~~~~li~~cl~~~p~~RP 293 (304)
T cd05096 239 EQPYGELTDE--QVIENAGEFFRDQGRQ----VYL-------------------FRPPPCPQGLYELMLQCWSRDCRERP 293 (304)
T ss_pred CCCCCcCCHH--HHHHHHHHHhhhcccc----ccc-------------------cCCCCCCHHHHHHHHHHccCCchhCc
Confidence 6677643211 1111111100000000 000 00113455788999999999999999
Q ss_pred ChHHHHHHHHH
Q 039228 316 NVPNAVHDLQS 326 (356)
Q Consensus 316 s~~~vl~~L~~ 326 (356)
|+.+|.+.|++
T Consensus 294 s~~~i~~~l~~ 304 (304)
T cd05096 294 SFSDIHAFLTE 304 (304)
T ss_pred CHHHHHHHHhC
Confidence 99999998863
No 46
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=289.86 Aligned_cols=169 Identities=22% Similarity=0.288 Sum_probs=145.8
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
..++|+++.+||+|+||.||+|+-+.||..+|+|++++.. ....+.+..|-.+|...++|+||++
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5689999999999999999999999999999999998653 3456778899999999999999998
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc--
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE-- 187 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 187 (356)
..++.+++.|+..+|..| +|||||||+|+|||..|++||+|||++.-+..
T Consensus 219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 347788999999999999 99999999999999999999999999853211
Q ss_pred -------------C----CCCC------------------------ccCCCCccccccccchhhhcCCCCCCccchHhHH
Q 039228 188 -------------V----SNPT------------------------QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYG 226 (356)
Q Consensus 188 -------------~----~~~~------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG 226 (356)
. .+.. .......+|||.|+|||++.+..|+..+|+||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 0000 0112346799999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCc
Q 039228 227 ILLLEMVTRRKPIDF 241 (356)
Q Consensus 227 ~~l~elltg~~Pf~~ 241 (356)
||+||||.|.+||..
T Consensus 376 ~ImyEmLvGyPPF~s 390 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCS 390 (550)
T ss_pred HHHHHHHhCCCCCCC
Confidence 999999999999974
No 47
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1e-36 Score=275.28 Aligned_cols=217 Identities=23% Similarity=0.372 Sum_probs=171.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
.+|.+.+.||+|+||.||+|.+..++..||+|.+... ......+.+|+.+++.++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 4588889999999999999999988999999998744 3335678899999999999999997
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-- 159 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-- 159 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee--
Confidence 347789999999999999 99999999999999999999999999976543221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.... ....... +......
T Consensus 160 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----~~~~~~~---------~~~~~~~ 224 (263)
T cd05052 160 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYEL---------LEKGYRM 224 (263)
T ss_pred -eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH---------HHCCCCC
Confidence 11112333567999999999999999999999999999998 999986421 1111111 1111100
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.. ...++..+.+++.+||+.+|++||++.+++++|+.+
T Consensus 225 ~~------------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ER------------------PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CC------------------CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 00 012345678999999999999999999999999875
No 48
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.5e-37 Score=289.80 Aligned_cols=217 Identities=21% Similarity=0.307 Sum_probs=166.5
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.++|+..+.||+|+||.||+|++..+++.||||++..... .....+.+|+.+++.++|+||+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 3457888999999999999999998999999999864432 334678899999999999999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 153 ~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~----~~~ 225 (353)
T PLN00034 153 FMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM----DPC 225 (353)
T ss_pred cCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc----ccc
Confidence 358899999999999999 9999999999999999999999999998654321 112
Q ss_pred CCccccccccchhhhcC-----CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 197 NGVRRTIGYTALDYDLG-----SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
....||..|+|||++.. ...+.++|||||||++|||++|+.||...... .+....... ...
T Consensus 226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~------------~~~ 291 (353)
T PLN00034 226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCAI------------CMS 291 (353)
T ss_pred cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHHH------------hcc
Confidence 34578999999998743 23456899999999999999999999732211 111111000 000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... .....+...+.+++.+||+.||++|||+.+|++.
T Consensus 292 ~~~---------------~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 292 QPP---------------EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCC---------------CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0001334467899999999999999999999874
No 49
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=297.12 Aligned_cols=208 Identities=20% Similarity=0.274 Sum_probs=172.0
Q ss_pred cceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHHHH----------------------
Q 039228 79 LIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFIS---------------------- 136 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~---------------------- 136 (356)
+||+|.||+||.|++..+....|||.+........+-+..|+.+.++|+|.|||++++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 7999999999999999999999999998777777788999999999999999999832
Q ss_pred ------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC-CCCceEEcccccccccccCCCCCccCCC
Q 039228 137 ------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLD-NDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 137 ------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
+.+||+.||.|||+.. |||||||-+|+|++ -.|.+||+|||.++.+...+ ....
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin----P~TE 734 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN----PCTE 734 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCC----cccc
Confidence 6789999999999998 99999999999996 68999999999999876544 2345
Q ss_pred CccccccccchhhhcCC--CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 198 GVRRTIGYTALDYDLGS--EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~--~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
.+.||+.|||||++..+ .|+.++|||||||++.||.||++||-+....... +..-.+-
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---------------MFkVGmy----- 794 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---------------MFKVGMY----- 794 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---------------hhhhcce-----
Confidence 58899999999999865 4889999999999999999999999754322111 1111110
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+..+.++.+...+..+++++|+.+||.+||+++++++.
T Consensus 795 ----------KvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 795 ----------KVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred ----------ecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 01123344666678899999999999999999999863
No 50
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.4e-37 Score=289.14 Aligned_cols=165 Identities=25% Similarity=0.252 Sum_probs=142.9
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
..++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999999999999999987432 3344678899999999999999876
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred CeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 236789999999999999 99999999999999999999999999975432
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
. .......+|..|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 179 ~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 179 S-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred C-----CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 2 1223356799999999999999999999999999999999999999743
No 51
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.1e-37 Score=290.68 Aligned_cols=221 Identities=22% Similarity=0.272 Sum_probs=167.8
Q ss_pred cCCCCccccceecCceEEEEEEE-----CCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHHH--------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVF-----DLNRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRFI-------- 135 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~-------- 135 (356)
.++|++.+.||+|+||.||+|.+ ..++..||||+++... ....+.+.+|+.++..+ +||||++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45699999999999999999974 3456789999986432 23346788999999999 899998752
Q ss_pred --------------------------------------------------------------------------------
Q 039228 136 -------------------------------------------------------------------------------- 135 (356)
Q Consensus 136 -------------------------------------------------------------------------------- 135 (356)
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence
Q ss_pred ------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 136 ------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 136 ------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 269 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSN- 269 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCccc-
Confidence 25679999999999999 99999999999999999999999999976543221
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
........++..|+|||++.+..++.++|||||||++|||++ |..||....... .+... +.....
T Consensus 270 -~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~------------~~~~~~ 335 (375)
T cd05104 270 -YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKM------------IKEGYR 335 (375)
T ss_pred -ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHH------------HHhCcc
Confidence 111222344667999999999999999999999999999998 899986432211 11111 111100
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.... ...+..+.+|+.+||+.||++|||+.+|++.|++.
T Consensus 336 ~~~~------------------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 MLSP------------------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCC------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0000 01233578999999999999999999999999863
No 52
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=7.1e-37 Score=279.11 Aligned_cols=219 Identities=21% Similarity=0.325 Sum_probs=170.7
Q ss_pred CCCCccccceecCceEEEEEEECCCC-----eEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNR-----AVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
++|++.+.||+|+||.||+|.....+ ..||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 46899999999999999999986554 7899999864432 334568899999999999999875
Q ss_pred ------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC
Q 039228 135 ------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL 172 (356)
Q Consensus 135 ------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~ 172 (356)
+.++.+++.||.|||+.+ ++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 147889999999999999 99999999999999999
Q ss_pred ceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHH
Q 039228 173 FAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHN 251 (356)
Q Consensus 173 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~ 251 (356)
.++|+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 162 ~~~L~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~ 237 (283)
T cd05048 162 TVKISDFGLSRDIYSADY--YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIE 237 (283)
T ss_pred cEEECCCcceeecccccc--ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence 999999999975432211 112233456788999999988899999999999999999998 99998643211 1111
Q ss_pred HHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 252 FARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.+...... ..+..++..+.+|+.+||+.||++||++++|++.|+++
T Consensus 238 ------------~i~~~~~~------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 238 ------------MIRSRQLL------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ------------HHHcCCcC------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11100000 00124556789999999999999999999999999764
No 53
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5e-37 Score=291.58 Aligned_cols=222 Identities=23% Similarity=0.278 Sum_probs=168.2
Q ss_pred cCCCCccccceecCceEEEEEEECCC-----CeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH---------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLN-----RAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF--------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l--------- 134 (356)
.++|++.+.||+|+||.||+|++... +..||+|.+.... ......+.+|+.+++.+ +|+||+++
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 45799999999999999999986433 3579999997543 23345688999999999 89999875
Q ss_pred --------------------------------------------------------------------------------
Q 039228 135 -------------------------------------------------------------------------------- 134 (356)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (356)
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
+.++.||+.||.|||+.+ |+||||||+|||+++++.++|+|||+++....... ....
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~--~~~~ 271 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN--YVVK 271 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcc--eeec
Confidence 125678999999999999 99999999999999999999999999976533221 1112
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
....++..|+|||++.+..++.++|||||||++|||++ |+.||....... .+... +.........
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~------------~~~~~~~~~~- 337 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKM------------VKRGYQMSRP- 337 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHH------------HHcccCccCC-
Confidence 22335678999999998899999999999999999997 999997432211 11111 1110000000
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
...+..+.+++.+||+.||++|||+.+|+++|+++.
T Consensus 338 -----------------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 -----------------DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -----------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 012335789999999999999999999999998863
No 54
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-36 Score=282.75 Aligned_cols=162 Identities=24% Similarity=0.346 Sum_probs=141.7
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.++|++.+.||+|+||.||++++..++..||+|.+..... ...+.+.+|+.++++++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 4689999999999999999999999999999999875432 334678999999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhc-CCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHH-CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~-~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+. + |+||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEcCCCChhhEEEcCCCcEEEccCccccccccc---
Confidence 35778999999999985 5 999999999999999999999999998754321
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 12335689999999999998999999999999999999999999964
No 55
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.2e-37 Score=279.07 Aligned_cols=208 Identities=20% Similarity=0.243 Sum_probs=163.3
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccCccc---hHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA---SKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
..||+|++|.||+|.+. |+.||||.+....... .+.+.+|+.+|++++||||+++
T Consensus 26 ~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 57899999999999984 7899999997543322 4667899999999999999986
Q ss_pred ---------------------HHHHHHHHHHHHHHhhc-CCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ---------------------ISIAIDVASALDYLHHH-CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~-~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+.++.+++.||.|||+. + ++||||||+||+++.++.+||+|||+++.....
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~---- 176 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSP---- 176 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhccc----
Confidence 44778999999999984 6 889999999999999999999999999754321
Q ss_pred ccCCCCccccccccchhhhcC--CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 193 QSSSNGVRRTIGYTALDYDLG--SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ....... +.....
T Consensus 177 ---~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-----~~~~~~i--------~~~~~~ 240 (283)
T PHA02988 177 ---PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-----KEIYDLI--------INKNNS 240 (283)
T ss_pred ---cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----HHHHHHH--------HhcCCC
Confidence 123457889999999976 6789999999999999999999999974321 1111100 000000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
.. .+..++..+.+++.+||+.||++|||+++|++.|+.+.
T Consensus 241 ~~------------------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 241 LK------------------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CC------------------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 00 00134556889999999999999999999999998764
No 56
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.2e-36 Score=288.87 Aligned_cols=238 Identities=20% Similarity=0.193 Sum_probs=168.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|+||.||+|.+..+++.||||.+... .....+.+.+|+.+++.++||||+++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999989999999998643 22334678899999999999999876
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 236789999999999999 9999999999999999999999999997643221
Q ss_pred CCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh--
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN-- 266 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 266 (356)
........++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.......-.....++..
T Consensus 158 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 158 ---SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ---cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHHhh
Confidence 1122334678899999998774 4789999999999999999999999743221 11111111111111111100
Q ss_pred ----hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 267 ----LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 267 ----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
..+..... ..+...... .........+.+|+.+||+.||++|||+.+++..
T Consensus 234 ~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPH----KPPSLPVLY--TLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCC----CCCchHHhc--ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000 000000000 0001223467899999999999999999999874
No 57
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.7e-37 Score=286.93 Aligned_cols=210 Identities=20% Similarity=0.165 Sum_probs=165.4
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 467999999999999999999999999999999987432 2334568899999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-- 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-- 171 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC--
Confidence 336789999999999999 999999999999999999999999999755321
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||..... ....... ....+.
T Consensus 172 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~~~i--------~~~~~~ 233 (329)
T PTZ00263 172 -----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----FRIYEKI--------LAGRLK 233 (329)
T ss_pred -----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----HHHHHHH--------hcCCcC
Confidence 1235689999999999999999999999999999999999999963211 1111110 000000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC-----hHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN-----VPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~~vl~~ 323 (356)
.+ ......+.+++.+||+.||.+||+ +.+++..
T Consensus 234 --~p------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 234 --FP------------------NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred --CC------------------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00 012234679999999999999997 5666643
No 58
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.3e-37 Score=285.89 Aligned_cols=205 Identities=20% Similarity=0.219 Sum_probs=160.6
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++++++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999997532 2334567889999999999999986
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~----~~~~~ 153 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD----GATMK 153 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----CCccc
Confidence 347789999999999999 999999999999999999999999998743221 11223
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...||+.|+|||++.+..++.++|||||||++|||++|..||.... ........ ......
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~~------------~~~~~~--- 213 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELI------------LMEEIR--- 213 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC-----HHHHHHHH------------HcCCCC---
Confidence 4678999999999999999999999999999999999999996321 11111110 000000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVH 322 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~ 322 (356)
.+......+.+++.+||+.||++|| ++.++++
T Consensus 214 -------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 214 -------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -------------CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 0002233578999999999999999 7888875
No 59
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.3e-36 Score=275.62 Aligned_cols=223 Identities=20% Similarity=0.292 Sum_probs=169.6
Q ss_pred CCCCccccceecCceEEEEEEECCCCe----EEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRA----VVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
++|++.+.||.|+||.||+|.+..++. .+++|.+..... .....+..|+..+++++||||+++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i 86 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV 86 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence 468889999999999999999876655 477777753322 223567788889999999999986
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
+.++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 458889999999999999 9999999999999999999999999998654322
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
. ........++..|++||++.+..++.++||||||+++|||++ |..||...... ... +++...
T Consensus 164 ~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~------------~~~~~~ 227 (279)
T cd05111 164 K--KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVP------------DLLEKG 227 (279)
T ss_pred c--ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHH------------HHHHCC
Confidence 1 112233456778999999998899999999999999999998 99998643211 111 111110
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
...... ..+...+.+++.+||..||++|||+.++++.|..+.+.-
T Consensus 228 ~~~~~~------------------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 228 ERLAQP------------------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred CcCCCC------------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 000000 012335678999999999999999999999998876543
No 60
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.1e-36 Score=273.52 Aligned_cols=221 Identities=20% Similarity=0.296 Sum_probs=172.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|+...+++.||||.+.... ......+.+|+.+++.++||||+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57999999999999999999999899999999876422 2334568899999999999999987
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 346789999999999999 99999999999999999999999999876543
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.. .......++..|+|||.+.+..++.++|+||||+++|+|++|..||...... ...+... +..
T Consensus 159 ~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~~---------~~~ 222 (267)
T cd08228 159 KT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQK---------IEQ 222 (267)
T ss_pred hh----HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHHH---------Hhc
Confidence 21 1122345788999999998888999999999999999999999998532211 1111111 000
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
...... ........+.+++.+||+.+|++||++.+|++.|+.+.
T Consensus 223 ~~~~~~-----------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 223 CDYPPL-----------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCCCCC-----------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 000000 00123346789999999999999999999999998753
No 61
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.3e-37 Score=296.59 Aligned_cols=235 Identities=21% Similarity=0.175 Sum_probs=165.1
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
..++|++.+.||+|+||.||+|....+++.||||.+.... ....+|+.+|+.++||||+++
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 4567999999999999999999999899999999885432 234579999999999999863
Q ss_pred ---------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC-ceEEcccc
Q 039228 135 ---------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL-FAHIGDFE 180 (356)
Q Consensus 135 ---------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg 180 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||
T Consensus 140 ~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 140 IFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred eEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 225679999999999999 99999999999999654 79999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN 259 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 259 (356)
+++.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||...... ..+..........
T Consensus 217 la~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p 290 (440)
T PTZ00036 217 SAKNLLAGQ-----RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTP 290 (440)
T ss_pred cchhccCCC-----CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCC
Confidence 998654321 12235678999999998764 6899999999999999999999999743221 1122221111111
Q ss_pred chHHH--hhhhhccccccccccccchhh-hhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 260 RVMDI--VNLVLLNDNKVLAGTNSNMLR-KTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 260 ~~~~~--~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
....+ ..+.... ...+.... ......+...+..+.+|+.+||..||.+|||+.++++.
T Consensus 291 ~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 291 TEDQLKEMNPNYAD------IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CHHHHHHhchhhhc------ccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 11110 0000000 00000000 00000001233467899999999999999999999843
No 62
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.4e-37 Score=299.44 Aligned_cols=218 Identities=19% Similarity=0.218 Sum_probs=171.2
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
...++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|+.++..++|+||+++
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34578999999999999999999999999999999987542 2334567889999999999988752
Q ss_pred -------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEc
Q 039228 135 -------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIG 177 (356)
Q Consensus 135 -------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 177 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEE
Confidence 236789999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC
Q 039228 178 DFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF 257 (356)
Q Consensus 178 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~ 257 (356)
|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||... .......
T Consensus 186 DFGls~~~~~~~~--~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~~~--- 255 (496)
T PTZ00283 186 DFGFSKMYAATVS--DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEVMH--- 255 (496)
T ss_pred ecccCeecccccc--ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHH---
Confidence 9999986543221 11223467899999999999999999999999999999999999999632 1111111
Q ss_pred CCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 258 PNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 258 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
..+...... .+...+..+.+++..||+.||.+||++.+++..
T Consensus 256 ---------~~~~~~~~~---------------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 256 ---------KTLAGRYDP---------------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ---------HHhcCCCCC---------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111111000 001234467899999999999999999999864
No 63
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.3e-36 Score=277.58 Aligned_cols=233 Identities=21% Similarity=0.302 Sum_probs=170.7
Q ss_pred CCccccceecCceEEEEEEE----CCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 74 FPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
|++.+.||+|+||+||++.. ..++..||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 38889999999999988754 34578999999875432 334678899999999999999986
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
+.++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||+++.......
T Consensus 86 v~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 86 IMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred EecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 457889999999999999 99999999999999999999999999986543221
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-CCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-PNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 269 (356)
. ........++..|+|||.+.+..++.++||||||+++|+|++|..||.................. ...+.+.++...
T Consensus 163 ~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T cd05080 163 Y-YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM 241 (283)
T ss_pred h-hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCC
Confidence 1 11112233466799999998888999999999999999999999998643221111110000000 011111121111
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
... .+..++..+.+++..||+.+|++|||+++|++.|+.+.
T Consensus 242 ~~~------------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 242 RLP------------------CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCC------------------CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 100 01134557899999999999999999999999999875
No 64
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.4e-36 Score=275.12 Aligned_cols=218 Identities=19% Similarity=0.319 Sum_probs=168.2
Q ss_pred CCCCccccceecCceEEEEEEEC---CCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFD---LNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
++|++.+.||+|+||.||+|.+. ..+..||+|.++.... .....+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46899999999999999999875 3467899999875432 334578899999999999999986
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
+.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 568889999999999999 9999999999999999999999999876432211
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
........++..|+|||++.+..++.++|||||||++||+++ |..||...... ..........
T Consensus 162 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~----------- 225 (266)
T cd05064 162 ---IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVEDGF----------- 225 (266)
T ss_pred ---hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCC-----------
Confidence 111112334678999999999999999999999999999775 99999643211 1111110000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
... .+..++..+.+++..||+.+|.+||++.+|++.|..+
T Consensus 226 ~~~-------------------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 RLP-------------------APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCC-------------------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 000 0113455788999999999999999999999998764
No 65
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2e-36 Score=276.81 Aligned_cols=236 Identities=23% Similarity=0.252 Sum_probs=164.3
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhc---CCCChHHH-------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNI---CHRNLVRF------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l------------- 134 (356)
+|++.+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.+ +||||+++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888999999999999999999999999999987432 22234556777777665 79999875
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcccc
Confidence 347789999999999999 99999999999999999999999999976
Q ss_pred cccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
..... ......++..|+|||++.+..++.++|||||||++|+|++|.+||......+ .+..............+
T Consensus 158 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 158 YSCQM-----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDW 231 (288)
T ss_pred ccCcc-----cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChhhC
Confidence 53221 1223567889999999998899999999999999999999999986432211 11111111100000000
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
- ................... .........+.+++.+||+.||++|||+.+++.
T Consensus 232 ~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 232 P-RDVTLPRGAFSPRGPRPVQ----SVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred c-ccccccccccCCCCCCchH----HhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 0000000000000000000 001123446789999999999999999999875
No 66
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.6e-36 Score=278.65 Aligned_cols=242 Identities=21% Similarity=0.333 Sum_probs=179.7
Q ss_pred cCCCCccccceecCceEEEEEEECCCCe----EEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRA----VVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
.++|+..+.||+|+||.||+|.+..++. .||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~ 85 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL 85 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCcee
Confidence 3568889999999999999999876665 578888764432 223468899999999999999986
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
+.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||+++.....
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccCc
Confidence 457789999999999999 999999999999999999999999999865432
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.. ........++..|+|||++.+..++.++||||||+++|||++ |..||...... ....+ +..
T Consensus 163 ~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~------------~~~ 226 (303)
T cd05110 163 EK--EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDL------------LEK 226 (303)
T ss_pred cc--ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH------------HHC
Confidence 21 111223345678999999998899999999999999999997 89998643211 11111 110
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhccccccccCCcCCccc
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLPETVFKSLTNNRAPK 347 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~~~~~~~~~~~~~~~ 347 (356)
..... .+..+...+.+++..||..+|++||++.+|++.|.++.+.......+..-.+...|+
T Consensus 227 ~~~~~------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 288 (303)
T cd05110 227 GERLP------------------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPS 288 (303)
T ss_pred CCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhhheeeccCCcCCCCC
Confidence 00000 001233457899999999999999999999999999876654444444444444444
Q ss_pred cc
Q 039228 348 LK 349 (356)
Q Consensus 348 ~~ 349 (356)
..
T Consensus 289 ~~ 290 (303)
T cd05110 289 PN 290 (303)
T ss_pred Cc
Confidence 43
No 67
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.7e-37 Score=286.77 Aligned_cols=217 Identities=18% Similarity=0.211 Sum_probs=168.8
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|++..+++.||+|++.... ......+..|+.++..++||||+++
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46999999999999999999999999999999997542 2234568889999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---- 153 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc----
Confidence 347789999999999999 99999999999999999999999999975432
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......||+.|+|||++.+..++.++|||||||++|||++|..||....... ..... ... .. .+......
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i-~~~-~~----~~~~~~~~ 223 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWENL-KYW-KE----TLQRPVYD 223 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHHH-Hhc-cc----cccCCCCC
Confidence 2234678999999999999999999999999999999999999997432111 00000 000 00 00000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
. ........+.+++.+||..+|.+||++.++++.
T Consensus 224 ~------------------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 224 D------------------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred c------------------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0 001234467899999999999999999999865
No 68
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-38 Score=293.05 Aligned_cols=219 Identities=21% Similarity=0.287 Sum_probs=175.7
Q ss_pred HHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 67 LLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 67 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
|+...+....++-||+|+.|.||+|+.. ++.||||.++.. -..+|+-|++|+||||+.|
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCI 189 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCI 189 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEE
Confidence 3334444556778999999999999987 789999997522 2347889999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
.+|..+||.|+.|||.+. |||||||.-||||..+..+||+|||.++.....
T Consensus 190 iMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~- 265 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK- 265 (904)
T ss_pred eeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh-
Confidence 457788999999999998 999999999999999999999999999865432
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.....+.||..|||||++.+.+.+.|+|||||||+|||||||..||.........+ ..-. + .
T Consensus 266 ----STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw-----GVGs-N-------s- 327 (904)
T KOG4721|consen 266 ----STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW-----GVGS-N-------S- 327 (904)
T ss_pred ----hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE-----eccC-C-------c-
Confidence 33445889999999999999999999999999999999999999997533221110 0000 0 0
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhcc
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLP 333 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~ 333 (356)
.....+..|+..+.-|+.+||+..|..||++.+++..|+-....+..
T Consensus 328 -----------------L~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~ 374 (904)
T KOG4721|consen 328 -----------------LHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLS 374 (904)
T ss_pred -----------------ccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence 11222347888899999999999999999999999999887766543
No 69
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-38 Score=266.04 Aligned_cols=215 Identities=19% Similarity=0.218 Sum_probs=172.3
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
.++.|++.+.||+|.|+.||++.+..+|+.+|+|+++.. .....+.+.+|+++-+.|+||||+++
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 356799999999999999999999999999999998643 34466889999999999999999998
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC---CCceEEccccccccccc
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN---DLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~ 187 (356)
-.++.||+.||.|+|.++ |||||+||+|+++.+ .--+||+|||+|..+..
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 126789999999999999 999999999999953 44689999999987652
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.....+..||++|||||++...+|+..+|||+.||+||-++.|.+||.+... .++...
T Consensus 166 -----g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-----------------~rlye~ 223 (355)
T KOG0033|consen 166 -----GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----------------HRLYEQ 223 (355)
T ss_pred -----ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-----------------HHHHHH
Confidence 3456678999999999999999999999999999999999999999964211 122222
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAV 321 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl 321 (356)
.+.+.++. ....|. ...++..+|+.+||..||.+|.|+.|.+
T Consensus 224 I~~g~yd~--------~~~~w~----~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 224 IKAGAYDY--------PSPEWD----TVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred HhccccCC--------CCcccC----cCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 22222211 111111 3334557999999999999999998765
No 70
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.7e-36 Score=284.08 Aligned_cols=224 Identities=22% Similarity=0.261 Sum_probs=169.8
Q ss_pred hcCCCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHHH-------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRFI------- 135 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~------- 135 (356)
..++|++.+.||.|+||.||+|.... +++.||+|++.... ....+.+..|+.++.++ +|+||++++
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 34579999999999999999997543 35789999987432 22345678899999999 799998762
Q ss_pred --------------------------------------------------------------------------------
Q 039228 136 -------------------------------------------------------------------------------- 135 (356)
Q Consensus 136 -------------------------------------------------------------------------------- 135 (356)
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence
Q ss_pred ------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccc
Q 039228 136 ------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTI 203 (356)
Q Consensus 136 ------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~ 203 (356)
.++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++..+..... ........++.
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~--~~~~~~~~~~~ 239 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKGDARLPL 239 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcc--hhhccCCCCCc
Confidence 24578999999999998 99999999999999999999999999986533221 11222345567
Q ss_pred cccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccc
Q 039228 204 GYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSN 282 (356)
Q Consensus 204 ~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 282 (356)
.|+|||++.+..++.++|||||||++|||++ |..||....... .+... +.......
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~------------~~~~~~~~---------- 296 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRR------------LKEGTRMR---------- 296 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHH------------HhccCCCC----------
Confidence 8999999999999999999999999999998 999986422111 11110 00000000
Q ss_pred hhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhh
Q 039228 283 MLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNN 329 (356)
Q Consensus 283 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~ 329 (356)
.+......+.+++.+||+.+|++||++.+|++.|+.+.+
T Consensus 297 --------~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 297 --------APEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred --------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 001233467899999999999999999999999998764
No 71
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.4e-36 Score=276.78 Aligned_cols=223 Identities=22% Similarity=0.347 Sum_probs=172.9
Q ss_pred CCCCccccceecCceEEEEEEEC-----CCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFD-----LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+|.+.+.||+|+||.||++... .++..+|+|.+........+.+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46889999999999999999852 3456799999876555556789999999999999999986
Q ss_pred --------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEE
Q 039228 135 --------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHI 176 (356)
Q Consensus 135 --------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 176 (356)
+.++.|++.||+|||+.+ ++||||||+||+++.++.++|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 236789999999999999 999999999999999999999
Q ss_pred cccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHH
Q 039228 177 GDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARM 255 (356)
Q Consensus 177 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~ 255 (356)
+|||+++....... ........++..|+|||++.+..++.++|||||||++|+|++ |..||....... ......
T Consensus 162 ~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i~- 236 (288)
T cd05093 162 GDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECIT- 236 (288)
T ss_pred ccCCccccccCCce--eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH-
Confidence 99999975432211 112223445778999999998889999999999999999998 999986432111 101000
Q ss_pred hCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 256 AFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 256 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
.+. .... ...++..+.+++.+||+.||.+|||+.+|++.|+.+....
T Consensus 237 --~~~--------~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 237 --QGR--------VLQR-------------------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred --cCC--------cCCC-------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 000 0000 0022345789999999999999999999999999998653
No 72
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.5e-36 Score=273.55 Aligned_cols=218 Identities=27% Similarity=0.401 Sum_probs=173.2
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
...+|++.+.||.|+||.||+|.+.. +..+|+|.+..........+..|+.+++.++||||+++
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34569999999999999999999987 78999999986655556788999999999999999986
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+++.||.|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 347789999999999999 99999999999999999999999999976533211
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
......++..|++||.+.+..++.++||||||+++|+|++ |+.||...... ....... ...
T Consensus 160 ----~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~------------~~~ 221 (261)
T cd05148 160 ----LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQIT------------AGY 221 (261)
T ss_pred ----cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHH------------hCC
Confidence 1123345678999999988889999999999999999998 89999643211 1111110 000
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
... ....++..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 222 ~~~------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 222 RMP------------------CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCC------------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000 0013445678999999999999999999999999864
No 73
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.7e-36 Score=274.94 Aligned_cols=223 Identities=23% Similarity=0.346 Sum_probs=170.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCe----EEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRA----VVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
.++|++.+.||+|+||.||+|.+..++. .||+|++..... .....+.+|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l 85 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL 85 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence 4578999999999999999999866655 489999864432 334678899999999999999864
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
+.++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 457889999999999999 999999999999999999999999999866432
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
... .......++..|+|||...+..++.++|||||||++|||++ |..||..... ..+... +..
T Consensus 163 ~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~------------~~~ 226 (279)
T cd05109 163 ETE--YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDL------------LEK 226 (279)
T ss_pred cce--eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH------------HHC
Confidence 211 11122334678999999998889999999999999999998 9999864221 111111 111
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNI 330 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~ 330 (356)
...... ...+...+.+++.+||+.||+.||++.++++.|+.+...
T Consensus 227 ~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 227 GERLPQ------------------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred CCcCCC------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 100000 012334678999999999999999999999999877543
No 74
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.5e-36 Score=281.52 Aligned_cols=201 Identities=22% Similarity=0.217 Sum_probs=157.1
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
||+|+||.||+|.+..+++.||+|++... .......+..|+.++.+++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999998743 22334567889999999999999987
Q ss_pred ---------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCc
Q 039228 135 ---------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199 (356)
Q Consensus 135 ---------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 199 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||+++...... ......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----~~~~~~ 153 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD----DKTNTF 153 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC----Cccccc
Confidence 347789999999999999 9999999999999999999999999997532211 122346
Q ss_pred cccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccccc
Q 039228 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGT 279 (356)
Q Consensus 200 ~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 279 (356)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......... ....
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~------------~~~~----- 211 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQ------------EPLR----- 211 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHc------------CCCC-----
Confidence 78999999999999999999999999999999999999996321 1111111111 0000
Q ss_pred ccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHH
Q 039228 280 NSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNA 320 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v 320 (356)
.+......+.+++.+||+.||.+||++.++
T Consensus 212 -----------~~~~~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 212 -----------FPDGFDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred -----------CCCcCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 001223356899999999999999865433
No 75
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-37 Score=290.68 Aligned_cols=213 Identities=19% Similarity=0.209 Sum_probs=174.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
.+-|++++.||.|+.|.|-+|++..||+.+|||++.+.. ......+.+|+-+|+-+.|||++++
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 456999999999999999999999999999999997542 2334568899999999999999998
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.||+.|+.|+|..+ |+||||||+|+|||..+++||+|||+|..-..
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~--- 164 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP--- 164 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC---
Confidence 458999999999999999 99999999999999999999999999975332
Q ss_pred CCccCCCCccccccccchhhhcCCCCC-CccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVS-TNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.......+|.+.|.+||++.|.+|. .++||||+|||||.||||+.||++ .++. .++...-
T Consensus 165 --gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir------------~LLlKV~ 225 (786)
T KOG0588|consen 165 --GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIR------------VLLLKVQ 225 (786)
T ss_pred --CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHH------------HHHHHHH
Confidence 2345568899999999999999985 789999999999999999999972 2332 2222222
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.+.+.. +-+.+.+..+|+.+|+..||..|.|+.||++.-
T Consensus 226 ~G~f~M----------------Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 226 RGVFEM----------------PSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred cCcccC----------------CCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 222211 113344567999999999999999999998753
No 76
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4e-36 Score=272.49 Aligned_cols=217 Identities=20% Similarity=0.380 Sum_probs=165.6
Q ss_pred CCccccceecCceEEEEEEECCCCe--EEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRA--VVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
|.+.+.||+|+||.||+|.+..++. .||+|.++.. .....+.+..|+.+++.++||||+++
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567889999999999999877654 6899988653 23345678899999999999999874
Q ss_pred ----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccc
Q 039228 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180 (356)
Q Consensus 135 ----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 180 (356)
..++.|++.||+|||+++ |+||||||+||+++.++.++|+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 236778999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCC
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPN 259 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 259 (356)
+++........ .......++..|++||+..+..++.++||||||+++|||++ |..||..... ..+..... .+
T Consensus 158 ~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~---~~ 230 (272)
T cd05075 158 LSKKIYNGDYY--RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYDYLR---QG 230 (272)
T ss_pred cccccCcccce--ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH---cC
Confidence 99865432211 11122345678999999998899999999999999999999 8899864211 11111100 00
Q ss_pred chHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 260 RVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 260 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
. .... ...++..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 231 ~--------~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 N--------RLKQ-------------------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred C--------CCCC-------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 0000 012334578999999999999999999999999875
No 77
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-37 Score=302.96 Aligned_cols=224 Identities=21% Similarity=0.314 Sum_probs=181.6
Q ss_pred cCCCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF---------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l---------- 134 (356)
..+....+.||+|.||.||+|+... ....||||.++..... ..++|.+|+.+|..|+|||||+|
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 4456677899999999999998643 3478999999866555 67889999999999999999998
Q ss_pred -----------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCc
Q 039228 135 -----------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173 (356)
Q Consensus 135 -----------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 173 (356)
+.|+.|||.|+.||-++. +|||||...|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceE
Confidence 569999999999999998 999999999999999999
Q ss_pred eEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHH
Q 039228 174 AHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNF 252 (356)
Q Consensus 174 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~ 252 (356)
|||+|||+++..-...- ........-...||+||.+..++++++||||||||+|||+++ |+.||.+....+ ..+.
T Consensus 642 VKIsDfGLsRdiYssDY--Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E--VIe~ 717 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDY--YKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE--VIEC 717 (774)
T ss_pred EEecccccchhhhhhhh--hcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH--HHHH
Confidence 99999999985432211 112223444778999999999999999999999999999999 999987543321 1111
Q ss_pred HHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 253 ARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
+ -+..+. ..+++|+.++.+||..||+.+|.+||+++||-..|+......
T Consensus 718 i-----------~~g~lL-------------------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 718 I-----------RAGQLL-------------------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred H-----------HcCCcc-------------------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 1 111111 223489999999999999999999999999999999876654
No 78
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.3e-36 Score=270.43 Aligned_cols=221 Identities=21% Similarity=0.278 Sum_probs=172.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|....++..||||.+.... ......+.+|+.+++.++||||+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 56889999999999999999998889999999886432 2234578899999999999999987
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
+.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 346778999999999999 99999999999999999999999999876543
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
... ......++..|+|||++.+..++.++|+||||+++|+|++|..||.....+ ........ .....+
T Consensus 159 ~~~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~-----~~~~~~ 226 (267)
T cd08229 159 KTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKI-----EQCDYP 226 (267)
T ss_pred CCc----ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhh-----hcCCCC
Confidence 221 122346788999999998888999999999999999999999998632211 11111100 000000
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
... .......+.+++.+||+.||++|||+.+|++++.+..
T Consensus 227 ~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 227 PLP---------------------SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCC---------------------cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 000 0124446789999999999999999999999998753
No 79
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.8e-36 Score=276.63 Aligned_cols=218 Identities=21% Similarity=0.294 Sum_probs=166.6
Q ss_pred CCCCccccceecCceEEEEEEECCC-----CeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLN-----RAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
.+|.+.+.||.|+||.||+|.+..+ +..||+|.++..... ....+..|+.++..++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 3478889999999999999987543 578999998754332 34568889999999999999865
Q ss_pred ------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC
Q 039228 135 ------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL 172 (356)
Q Consensus 135 ------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~ 172 (356)
..++.|++.||.|||+++ |+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCC
Confidence 236679999999999999 99999999999999999
Q ss_pred ceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHH
Q 039228 173 FAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHN 251 (356)
Q Consensus 173 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~ 251 (356)
.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |..||..... ..
T Consensus 162 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~ 234 (283)
T cd05091 162 NVKISDLGLFREVYAADY--YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QD 234 (283)
T ss_pred ceEecccccccccccchh--eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HH
Confidence 999999999876533221 111223445778999999988889999999999999999998 8888864211 11
Q ss_pred HHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 252 FARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
..... .+.... .. +..++..+.+++..||+.+|++||++++|+..|+.
T Consensus 235 ~~~~i--------~~~~~~-~~------------------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VIEMI--------RNRQVL-PC------------------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHH--------HcCCcC-CC------------------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111 010000 00 01344567899999999999999999999999864
No 80
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.8e-36 Score=270.42 Aligned_cols=217 Identities=18% Similarity=0.350 Sum_probs=166.0
Q ss_pred CCccccceecCceEEEEEEECCC---CeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLN---RAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
|++.+.||+|+||.||+|....+ +..||+|.++... ......+.+|+..++.++||||+++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999997653 4789999987542 2334578899999999999999875
Q ss_pred -----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccc
Q 039228 135 -----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF 179 (356)
Q Consensus 135 -----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 179 (356)
..++.|++.||.|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 236789999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCC
Q 039228 180 ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFP 258 (356)
Q Consensus 180 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 258 (356)
|+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..... .......
T Consensus 158 g~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~~~----- 228 (273)
T cd05035 158 GLSKKIYSGDYY--RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYDYL----- 228 (273)
T ss_pred cceeeccccccc--cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH-----
Confidence 999865432211 11112234668999999988889999999999999999999 8899864221 1111110
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
..+... ..+..+...+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 229 ----------~~~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 229 ----------RHGNRL---------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ----------HcCCCC---------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000000 00113445678999999999999999999999999875
No 81
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.8e-36 Score=271.95 Aligned_cols=216 Identities=24% Similarity=0.399 Sum_probs=168.3
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||+|+||.||+|.... +..||+|.+.... ...+.+.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 4579999999999999999999764 4779999876432 235678999999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.++.+++.||+|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY- 158 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence 347789999999999998 99999999999999999999999999986543221
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||...... ...........
T Consensus 159 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~------------ 222 (261)
T cd05072 159 --TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGYR------------ 222 (261)
T ss_pred --eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCC------------
Confidence 11223345678999999988889999999999999999998 99998642211 11111110000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
.. ....++..+.+++.+||+.+|++||+++++++.|+.
T Consensus 223 ~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 223 MP------------------RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CC------------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00 001233457899999999999999999999999975
No 82
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.9e-36 Score=273.00 Aligned_cols=218 Identities=26% Similarity=0.381 Sum_probs=168.1
Q ss_pred cCCCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF---------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l---------- 134 (356)
.++|.+.+.||+|+||.||+|.... ++..||+|.+...... ..+.+.+|+.+++.++|+||+++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3568899999999999999998743 3578999998755443 45689999999999999999987
Q ss_pred -----------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCc
Q 039228 135 -----------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173 (356)
Q Consensus 135 -----------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 173 (356)
..++.+++.||.|||+.+ ++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence 125778999999999999 999999999999999999
Q ss_pred eEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHH
Q 039228 174 AHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNF 252 (356)
Q Consensus 174 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~ 252 (356)
++|+|||++........ ........++..|+|||++.+..++.++|||||||++|||++ |..||...... .....
T Consensus 161 ~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~ 236 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIEC 236 (280)
T ss_pred EEECCcccceecccCcc--eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHH
Confidence 99999999875432211 111223345778999999999999999999999999999998 99998643211 11111
Q ss_pred HHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 253 ARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
... .... .. ....+..+.+++.+||+.||++||++.+|++.|+
T Consensus 237 ~~~-----------~~~~-~~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 ITQ-----------GRLL-QR------------------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHc-----------CCcC-CC------------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 110 0000 00 0123346789999999999999999999999986
No 83
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2e-36 Score=284.72 Aligned_cols=217 Identities=22% Similarity=0.240 Sum_probs=169.1
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|.+.+.||+|+||.||+|.+..+++.||||++.... ......+..|+.++..++||||+++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46999999999999999999999999999999997432 2345678889999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC-
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN- 190 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 190 (356)
..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 347789999999999999 99999999999999999999999999976543320
Q ss_pred ------------------------CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCC
Q 039228 191 ------------------------PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246 (356)
Q Consensus 191 ------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~ 246 (356)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-- 235 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL-- 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH--
Confidence 001223346789999999999999999999999999999999999999974321
Q ss_pred ccHHHHHHHhCCCchHHHhh--hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC-hHHHHHH
Q 039228 247 LNLHNFARMAFPNRVMDIVN--LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN-VPNAVHD 323 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~~vl~~ 323 (356)
..... .+.. ..+.... .......+.+++.+|+. ||.+||+ +.++++.
T Consensus 236 ---~~~~~--------~i~~~~~~~~~p~------------------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 ---QETYN--------KIINWKESLRFPP------------------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ---HHHHH--------HHhccCCcccCCC------------------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11110 1111 0000000 00123457889999997 9999999 9999874
No 84
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.3e-36 Score=281.09 Aligned_cols=206 Identities=22% Similarity=0.245 Sum_probs=161.4
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999997532 2334577889999999999999986
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~----~~~~~ 153 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD----AATMK 153 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc----ccccc
Confidence 347889999999999999 999999999999999999999999998753221 11223
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....... +.....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~~------------~~~~~~--- 213 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELI------------LMEDIK--- 213 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHHh------------ccCCcc---
Confidence 45689999999999988999999999999999999999999964211 1111111 000000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVHD 323 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~~ 323 (356)
.+......+.+++.+||+.||.+|| ++.++++.
T Consensus 214 -------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 -------------FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -------------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0002233567899999999999997 88888764
No 85
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5e-36 Score=275.63 Aligned_cols=226 Identities=21% Similarity=0.278 Sum_probs=163.0
Q ss_pred cCCCCccccceecCceEEEEEEECCC---CeEEEEEEeeccCccch-----------HHHHHHHHHHhhcCCCChHHH--
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLN---RAVVAIKVLSIQCQGAS-----------KSFMAECKALKNICHRNLVRF-- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l-- 134 (356)
.++|++.+.||+|+||.||+|.+..+ +..+|+|+......... .....+...+..+.|+|++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 46799999999999999999998877 67788887543322110 112233344556778877653
Q ss_pred --------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEE
Q 039228 135 --------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHI 176 (356)
Q Consensus 135 --------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 176 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcEEE
Confidence 348889999999999998 999999999999999999999
Q ss_pred cccccccccccCCCC---CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHH
Q 039228 177 GDFELARFRQEVSNP---TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFA 253 (356)
Q Consensus 177 ~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~ 253 (356)
+|||+++........ .........||+.|+|||+..+..++.++|||||||++|||++|..||....... ......
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~~~~~ 246 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NLIHAA 246 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HHHHHh
Confidence 999999866432211 1112233568999999999999999999999999999999999999997543222 111111
Q ss_pred HHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 254 RMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.. +++.....+... ...++..+.+++..|++.+|++||++.+|++.|
T Consensus 247 ~~-------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 247 KC-------DFIKRLHEGKIK-----------------IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HH-------HHHHHhhhhhhc-----------------cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 10 111111111000 013345688999999999999999999999876
No 86
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.3e-36 Score=273.81 Aligned_cols=217 Identities=22% Similarity=0.268 Sum_probs=169.1
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++++++||||+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 36888999999999999999999999999999987542 2334678899999999999999986
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...... ...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~------~~~ 151 (279)
T cd06619 81 MDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS------IAK 151 (279)
T ss_pred CCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc------ccc
Confidence 347889999999999999 999999999999999999999999999754321 223
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccH--HHHHHHhCCCchHHHhhhhhcccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNL--HNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
...++..|+|||++.+..++.++|+||||+++|+|++|+.||.......... ...... +.+... ....
T Consensus 152 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~- 221 (279)
T cd06619 152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC--------IVDEDP-PVLP- 221 (279)
T ss_pred CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHH--------HhccCC-CCCC-
Confidence 3568899999999999899999999999999999999999997533221111 010000 000000 0000
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.......+.+++.+||+.+|++||++.++++.
T Consensus 222 ----------------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 222 ----------------VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ----------------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00122357899999999999999999999875
No 87
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.6e-36 Score=281.24 Aligned_cols=205 Identities=20% Similarity=0.228 Sum_probs=160.1
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
+.||+|+||.||++....++..||+|++.... ......+..|+.+++.++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36899999999999999999999999997532 2334567789999999999999987
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~----~~~~~ 153 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD----GATMK 153 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCC----CCccc
Confidence 347889999999999999 999999999999999999999999998743211 11223
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....... ......
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~~------------~~~~~~--- 213 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELI------------LMEEIR--- 213 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHH------------hcCCCC---
Confidence 45689999999999999999999999999999999999999964211 1111100 000000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVH 322 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~ 322 (356)
.+......+.+++.+||+.||.+|| ++.++++
T Consensus 214 -------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 214 -------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -------------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 0002233567999999999999998 7888765
No 88
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.3e-36 Score=275.01 Aligned_cols=235 Identities=20% Similarity=0.292 Sum_probs=171.3
Q ss_pred cCCCCccccceecCceEEEEEEE----CCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
..+|++.+.||+|+||.||+|.. ..++..||+|.+........+.+.+|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 35789999999999999999984 34678999999876655556788999999999999999875
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
..++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 347789999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCC--CchHHH
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP--NRVMDI 264 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~ 264 (356)
...... .......++..|+|||++.+..++.++||||||+++|||++|..|+..... .+......... .....+
T Consensus 160 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 160 QDKEYY-KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred CCCcce-eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhhhhcccccccccchHHH
Confidence 322111 111112234569999999988899999999999999999998877542211 11110000000 001111
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.+. +..... ......++..+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 236 ~~~-~~~~~~--------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IEL-LKNNGR--------------LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHH-HhcCCc--------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 110 000000 000113445688999999999999999999999999876
No 89
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=307.33 Aligned_cols=223 Identities=22% Similarity=0.345 Sum_probs=176.8
Q ss_pred CCCCccccceecCceEEEEEEECCC-----CeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLN-----RAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
.+.+....||+|.||.||.|....- ...||||.++... ......|++|..+|+.++|||||++
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 4466778999999999999998643 2359999987653 4456789999999999999999987
Q ss_pred ---------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccc
Q 039228 135 ---------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFEL 181 (356)
Q Consensus 135 ---------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 181 (356)
+.++.|||+|+.||++++ +|||||..+|+||+....+||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccch
Confidence 668999999999999998 99999999999999999999999999
Q ss_pred ccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCc
Q 039228 182 ARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNR 260 (356)
Q Consensus 182 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 260 (356)
|+.+....- ........-...|||||.+..+.++.++|||||||++||++| |..||......
T Consensus 849 ArDiy~~~y--yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--------------- 911 (1025)
T KOG1095|consen 849 ARDIYDKDY--YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--------------- 911 (1025)
T ss_pred hHhhhhchh--eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH---------------
Confidence 994322111 111111233567999999999999999999999999999999 99998743211
Q ss_pred hHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 261 VMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
+++...+.+. ++..+..|+..+.+||..||+.+|++||++..|++.+..|....
T Consensus 912 --~v~~~~~~gg---------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 912 --EVLLDVLEGG---------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred --HHHHHHHhCC---------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 1111111000 12223478999999999999999999999999999999998654
No 90
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=295.34 Aligned_cols=224 Identities=19% Similarity=0.197 Sum_probs=179.0
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l--------------- 134 (356)
.-++++.+.|.+|||+.||+|.+...+..||+|++-..+....+.+.+|+.+|+.|+ |+|||.+
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 446788999999999999999999888999999987777777889999999999998 9999987
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
+.|+.|+++|+++||.. ++||||||||-+||||+.+|..||||||.|.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 67999999999999998 4889999999999999999999999999986
Q ss_pred ccccCC-CC-C---ccCCCCccccccccchhhh---cCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHH
Q 039228 184 FRQEVS-NP-T---QSSSNGVRRTIGYTALDYD---LGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255 (356)
Q Consensus 184 ~~~~~~-~~-~---~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~ 255 (356)
...... .. . ....-...-|+.|+|||++ .+..++.|+|||+|||+||-|+....||+....-
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l---------- 264 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL---------- 264 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----------
Confidence 422111 00 0 0000112248899999986 4678999999999999999999999999742111
Q ss_pred hCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhh
Q 039228 256 AFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNI 330 (356)
Q Consensus 256 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~ 330 (356)
.|++- .+. ....+.....|.+||..||+.||++||++-+|+..+.++...
T Consensus 265 -------aIlng----~Y~--------------~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 265 -------AILNG----NYS--------------FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -------eEEec----ccc--------------CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 11111 110 000125566789999999999999999999999999999864
No 91
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8.3e-36 Score=269.74 Aligned_cols=220 Identities=20% Similarity=0.357 Sum_probs=170.1
Q ss_pred cCCCCccccceecCceEEEEEEECCC---CeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLN---RAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.++|++.+.||+|+||.||+|.+..+ ...||+|.+..... .....+..|+.++++++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 35799999999999999999998643 46899999875433 334578899999999999999986
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
+.++.+++.||.|||+.+ |+|+||||+||++++++.++|+|||++......
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 457889999999999998 999999999999999999999999999876421
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ..........
T Consensus 160 ~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~---------- 225 (266)
T cd05033 160 EAT--YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGY---------- 225 (266)
T ss_pred ccc--eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC----------
Confidence 111 11112334678999999998899999999999999999998 99998643211 1111111000
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.... ...++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 226 --~~~~------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 --RLPP------------------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --CCCC------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000 012344678999999999999999999999999875
No 92
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.5e-36 Score=277.16 Aligned_cols=238 Identities=23% Similarity=0.306 Sum_probs=168.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|.+.+.||+|+||.||+|++..++..||+|.++.... .....+.+|+.++++++||||+++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 579999999999999999999998999999999875432 233467789999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 158 (309)
T cd07872 86 LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT---- 158 (309)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc----
Confidence 336789999999999999 9999999999999999999999999997543221
Q ss_pred cCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-C-CchH-HHhhhhh
Q 039228 194 SSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-P-NRVM-DIVNLVL 269 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~l 269 (356)
.......++..|+|||++.+ ..++.++|||||||++|+|+||+.||......+ .+........ + .... .+....-
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhhcchhh
Confidence 11223456889999998865 458899999999999999999999997533211 1111111110 0 0000 0000000
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.............. ..........+.+++.+||+.||.+|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 238 FKNYNFPKYKPQPL-----INHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhcCccCCCch-----hhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000000000 0011123445689999999999999999999987
No 93
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.9e-36 Score=274.21 Aligned_cols=224 Identities=21% Similarity=0.287 Sum_probs=169.9
Q ss_pred CCCCccccceecCceEEEEEEECCCCe--EEEEEEeecc-CccchHHHHHHHHHHhhc-CCCChHHH-------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRA--VVAIKVLSIQ-CQGASKSFMAECKALKNI-CHRNLVRF------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l------------- 134 (356)
++|++.+.||.|+||.||+|....++. .+++|.++.. .....+.+.+|+.++.++ +||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578999999999999999999876654 4788887643 233446788999999999 79999976
Q ss_pred ----------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCce
Q 039228 135 ----------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA 174 (356)
Q Consensus 135 ----------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 174 (356)
+.++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 236678999999999999 9999999999999999999
Q ss_pred EEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHH
Q 039228 175 HIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFA 253 (356)
Q Consensus 175 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~ 253 (356)
||+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||..... ....
T Consensus 159 kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-----~~~~ 228 (297)
T cd05089 159 KIADFGLSRGEEVYV-----KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-----AELY 228 (297)
T ss_pred EECCcCCCcccccee-----ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence 999999986322110 1111222457999999988889999999999999999997 9999864321 1111
Q ss_pred HHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhcc
Q 039228 254 RMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLP 333 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~ 333 (356)
.. +........ ...+...+.+++.+||+.+|.+||++.++++.|+.+.+....
T Consensus 229 ~~---------~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 229 EK---------LPQGYRMEK------------------PRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred HH---------HhcCCCCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 10 111000000 012334678999999999999999999999999999887654
Q ss_pred cc
Q 039228 334 ET 335 (356)
Q Consensus 334 ~~ 335 (356)
..
T Consensus 282 ~~ 283 (297)
T cd05089 282 YV 283 (297)
T ss_pred cc
Confidence 43
No 94
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.7e-36 Score=274.18 Aligned_cols=223 Identities=22% Similarity=0.347 Sum_probs=172.8
Q ss_pred CCCCccccceecCceEEEEEEEC-----CCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFD-----LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+|.+.+.||+|+||.||+|... .++..+++|.+........+.+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45888899999999999999864 2456799999876555555778999999999999999875
Q ss_pred -----------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCc
Q 039228 135 -----------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173 (356)
Q Consensus 135 -----------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 173 (356)
+.++.+|+.||+|||+++ |+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 236788999999999999 999999999999999999
Q ss_pred eEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHH
Q 039228 174 AHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNF 252 (356)
Q Consensus 174 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~ 252 (356)
++|+|||++........ ........++..|+|||++.+..++.++||||||+++|||+| |..||...... .....
T Consensus 162 ~~l~dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~ 237 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--EVIEC 237 (291)
T ss_pred EEECCCCcccccCCCce--eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence 99999999975433211 112233456788999999999999999999999999999999 99998643211 11110
Q ss_pred HHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 253 ARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
.. .+ ... .. ...++..+.+++.+||+.+|++||++.+|+++|+++....
T Consensus 238 ~~---~~--------~~~-~~------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 238 IT---QG--------RVL-ER------------------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred Hh---CC--------CCC-CC------------------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 00 00 000 00 0123446789999999999999999999999999997753
No 95
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.9e-35 Score=274.31 Aligned_cols=160 Identities=24% Similarity=0.318 Sum_probs=131.6
Q ss_pred cccceecCceEEEEEEECC--CCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 77 INLIGVGSFDAVYQGVFDL--NRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
...||+|+||.||+|+... +++.||+|.+.... ....+.+|+.++++++||||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 4589999999999999753 56899999986432 23457789999999999999976
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe----CCCCceEEccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL----DNDLFAHIGDFELAR 183 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~a~ 183 (356)
..++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 236789999999999999 9999999999999 466889999999998
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
........ ........+|+.|+|||++.+ ..++.++||||+||++|+|++|++||...
T Consensus 161 ~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 161 LFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCCcc-ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 65432211 122334678999999999876 45889999999999999999999999643
No 96
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1e-35 Score=268.47 Aligned_cols=216 Identities=27% Similarity=0.407 Sum_probs=168.1
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||+|++|.||+|.+..+ +.||+|.++... ...+.+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNT-TPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCC-eEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 46799999999999999999997654 789999987543 335678899999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||+++......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 157 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDI-- 157 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCc--
Confidence 457789999999999999 9999999999999999999999999998664221
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.........+..|+|||++.+..++.++|+||||+++|+|++ |+.||...... ..... ++....
T Consensus 158 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~------------~~~~~~ 222 (261)
T cd05068 158 -YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQ------------VDQGYR 222 (261)
T ss_pred -ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHH------------HHcCCC
Confidence 111122233467999999998899999999999999999999 99998643211 11110 110000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
... ...++..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 223 ~~~------------------~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 MPC------------------PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCC------------------CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 000 01234467899999999999999999999999975
No 97
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6e-36 Score=278.87 Aligned_cols=209 Identities=21% Similarity=0.248 Sum_probs=160.1
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHH---hhcCCCChHHH-------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKAL---KNICHRNLVRF------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l------------- 134 (356)
|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+..|+.++ +.++||||+++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 678899999999999999999999999999997432 22345566676654 56789999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-- 155 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-- 155 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCCC--
Confidence 458889999999999999 9999999999999999999999999986432211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||..... .... +.....
T Consensus 156 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-----~~~~------------~~i~~~ 216 (324)
T cd05589 156 --DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-----EEVF------------DSIVND 216 (324)
T ss_pred --CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----HHHH------------HHHHhC
Confidence 122346789999999999999999999999999999999999999964221 1111 111000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~ 322 (356)
... .+......+.+++.+||+.||.+|| ++.++++
T Consensus 217 ~~~----------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 217 EVR----------------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCC----------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 000 0002234567899999999999999 4566554
No 98
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.4e-35 Score=266.34 Aligned_cols=221 Identities=22% Similarity=0.320 Sum_probs=173.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|....+++.||+|.++.. .....+.+.+|+.++++++|+|++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 5799999999999999999999988999999988642 22335678899999999999999876
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
+.++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 346788999999999999 99999999999999999999999999876533
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.. .......++..|+|||.+.+..++.++|+||||+++|+|++|+.||.... .........
T Consensus 159 ~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~------------ 219 (267)
T cd08224 159 KT----TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKK------------ 219 (267)
T ss_pred CC----cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhh------------
Confidence 21 11223457888999999998889999999999999999999999985322 111111111
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
........ .........+.+++.+||..+|++|||+.+|+++|+.+.
T Consensus 220 ~~~~~~~~--------------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 220 IEKCDYPP--------------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhcCCCCC--------------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00000000 000133446789999999999999999999999998874
No 99
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.1e-36 Score=292.74 Aligned_cols=213 Identities=18% Similarity=0.193 Sum_probs=168.0
Q ss_pred CCCccccceecCceEEEEEEECCC-CeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLN-RAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
.|.+.+.||+|+||.||+|....+ +..||+|.+..........+..|+.+|+.++||||+++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 489999999999999999998877 78899998765555555667889999999999999986
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 236789999999999999 99999999999999999999999999986543221
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||..... .. ++...+.
T Consensus 225 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~------------~~~~~~~ 285 (478)
T PTZ00267 225 --LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----RE------------IMQQVLY 285 (478)
T ss_pred --cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HH------------HHHHHHh
Confidence 1223346789999999999999999999999999999999999999963211 11 1111111
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+.... .+..+...+.+++..||..||++||++.+++.
T Consensus 286 ~~~~~---------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 286 GKYDP---------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCC---------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11100 00123345789999999999999999999875
No 100
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-37 Score=288.70 Aligned_cols=233 Identities=21% Similarity=0.280 Sum_probs=182.7
Q ss_pred hHHHHHhhcCCCCccccceecCceEEEEEEECCCC----eEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH-
Q 039228 63 YYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNR----AVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF- 134 (356)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l- 134 (356)
..+.|+...++-.+.+.||+|+||.||+|.....+ ..||+|..+.. .....+++.+|+++|++++|||||++
T Consensus 148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY 227 (474)
T ss_pred cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 33456667788888899999999999999987542 23899998752 35567889999999999999999997
Q ss_pred -------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEc
Q 039228 135 -------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIG 177 (356)
Q Consensus 135 -------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 177 (356)
+.++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeC
Confidence 458889999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHH-HH
Q 039228 178 DFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFA-RM 255 (356)
Q Consensus 178 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~-~~ 255 (356)
|||+++..... ........-...|+|||.+....++.++|||||||++||+++ |..||.+.... .....+ ..
T Consensus 305 DFGLs~~~~~~----~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~~~ 378 (474)
T KOG0194|consen 305 DFGLSRAGSQY----VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIVKN 378 (474)
T ss_pred ccccccCCcce----eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHHhc
Confidence 99998754311 111111234678999999999999999999999999999999 88898754322 111111 11
Q ss_pred hCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhccc
Q 039228 256 AFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLPE 334 (356)
Q Consensus 256 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~~ 334 (356)
.++. ..+...+..+..++.+||..+|++||+|.++.+.|+.+.....+.
T Consensus 379 ~~r~------------------------------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 379 GYRM------------------------------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred CccC------------------------------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 1110 011134456778899999999999999999999999999887654
No 101
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.3e-36 Score=273.31 Aligned_cols=220 Identities=21% Similarity=0.341 Sum_probs=166.7
Q ss_pred hcCCCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH---------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF--------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l--------- 134 (356)
..++|++.+.||+|+||.||+|.+.. ++..||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45679999999999999999998642 35789999986432 2334568899999999999999976
Q ss_pred --------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEE
Q 039228 135 --------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHI 176 (356)
Q Consensus 135 --------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 176 (356)
+.++.+++.||.|||+.+ ++|+||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 225678999999999998 999999999999999999999
Q ss_pred cccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHH
Q 039228 177 GDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARM 255 (356)
Q Consensus 177 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~ 255 (356)
+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..... ......
T Consensus 161 ~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-----~~~~~~ 233 (277)
T cd05062 161 GDFGMTRDIYETDYY--RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-----EQVLRF 233 (277)
T ss_pred CCCCCccccCCccee--ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Confidence 999998754322211 11122345678999999998889999999999999999999 7889864321 111110
Q ss_pred hCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 256 AFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 256 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
+...... .. ...++..+.+++.+||+.||++|||+.++++.|++
T Consensus 234 --------~~~~~~~-~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 234 --------VMEGGLL-DK------------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred --------HHcCCcC-CC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 0000000 00 01234467899999999999999999999999863
No 102
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1e-35 Score=290.76 Aligned_cols=163 Identities=21% Similarity=0.317 Sum_probs=133.2
Q ss_pred HhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCC------hHHH-------
Q 039228 68 LKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRN------LVRF------- 134 (356)
Q Consensus 68 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l------- 134 (356)
....++|++.+.||+|+||.||+|.+..+++.||||+++... .....+..|+.++..++|.+ ++++
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 345678999999999999999999999899999999986432 22344566777777776543 3332
Q ss_pred ------------------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCC-----------
Q 039228 135 ------------------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDL----------- 172 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~----------- 172 (356)
..++.||+.||.|||+ .+ ||||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred CceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccccccccc
Confidence 3578899999999997 48 99999999999998665
Q ss_pred -----ceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 173 -----FAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 173 -----~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 281 ~~~~~~vkl~DfG~~~~~~-------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDER-------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred CCCCceEEECCCCccccCc-------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 49999999875321 122346789999999999999999999999999999999999999974
No 103
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-35 Score=276.85 Aligned_cols=162 Identities=25% Similarity=0.366 Sum_probs=140.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.++|++.+.||.|+||.||+|.+..++..+|+|++..... .....+.+|+++++.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 4689999999999999999999999999999999875432 334678899999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhc-CCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHH-CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~-~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+. + |+|+||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---
Confidence 34778999999999974 6 999999999999999999999999998754321
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12235678999999999988899999999999999999999999964
No 104
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.9e-36 Score=283.79 Aligned_cols=167 Identities=23% Similarity=0.257 Sum_probs=141.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|+.++..++||||+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999997532 2334567889999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||+|||+.+ |+||||||+|||++.++.++|+|||+++.+......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 347889999999999999 999999999999999999999999998754321110
Q ss_pred C----------------------------------ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCC
Q 039228 192 T----------------------------------QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRK 237 (356)
Q Consensus 192 ~----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~ 237 (356)
. ........||+.|+|||++.+..++.++|||||||++|||++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 0 001113468999999999999999999999999999999999999
Q ss_pred CCCc
Q 039228 238 PIDF 241 (356)
Q Consensus 238 Pf~~ 241 (356)
||..
T Consensus 238 Pf~~ 241 (364)
T cd05599 238 PFCS 241 (364)
T ss_pred CCCC
Confidence 9964
No 105
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.3e-35 Score=267.30 Aligned_cols=212 Identities=19% Similarity=0.296 Sum_probs=162.9
Q ss_pred cceecCceEEEEEEE--CCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 79 LIGVGSFDAVYQGVF--DLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
.||+|+||.||+|.+ ..++..+|+|++..... ...+.+..|+.+++.++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 589999999999975 45678999999864432 234678899999999999999976
Q ss_pred ----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCC
Q 039228 135 ----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198 (356)
Q Consensus 135 ----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 198 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......... .....
T Consensus 82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~ 157 (257)
T cd05116 82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY-KAKTH 157 (257)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCee-eecCC
Confidence 457889999999999999 9999999999999999999999999997654332211 11122
Q ss_pred ccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 199 ~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
..++..|+|||.+....++.++|+||||+++|||++ |..||...... ..... +........
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~------------i~~~~~~~~---- 219 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQM------------IESGERMEC---- 219 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH------------HHCCCCCCC----
Confidence 334578999999988889999999999999999998 99999743211 11111 111100000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
+..++..+.+++.+||+.||++||++.+|.+.|+.
T Consensus 220 --------------~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 220 --------------PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred --------------CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 01234467899999999999999999999999975
No 106
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.2e-35 Score=268.35 Aligned_cols=217 Identities=24% Similarity=0.391 Sum_probs=169.4
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||+|+||.||+|.+..+ ..||+|.+..... ..+.+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcC
Confidence 45699999999999999999998766 5699999875332 34678899999999999999875
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-- 157 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 157 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc--
Confidence 347789999999999999 99999999999999999999999999976543221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......++..|+|||+..+..++.++||||||+++|+|++ |..||...... ..... +......
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-----~~~~~---------~~~~~~~ 222 (262)
T cd05071 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQ---------VERGYRM 222 (262)
T ss_pred -ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-----HHHHH---------HhcCCCC
Confidence 11223445678999999988889999999999999999999 88898643211 00000 0000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
. ....++..+.+++.+||+.+|++||++.++++.|+..
T Consensus 223 ~------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 P------------------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred C------------------CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0 0113455678999999999999999999999999864
No 107
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1e-35 Score=301.69 Aligned_cols=226 Identities=23% Similarity=0.301 Sum_probs=173.5
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+++.+|+.++++++||||+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999999999999999987432 2234578999999999999999976
Q ss_pred ----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccc
Q 039228 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180 (356)
Q Consensus 135 ----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 180 (356)
+.++.||+.||+|||+.+ |+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 235679999999999999 9999999999999999999999999
Q ss_pred cccccccCCC--------------CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCC
Q 039228 181 LARFRQEVSN--------------PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD 246 (356)
Q Consensus 181 ~a~~~~~~~~--------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~ 246 (356)
+++....... ..........||+.|+|||++.+..++.++|||||||++|||+||..||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521110 01112234579999999999999999999999999999999999999996421111
Q ss_pred ccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-ChHHHHHHHH
Q 039228 247 LNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-NVPNAVHDLQ 325 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~~vl~~L~ 325 (356)
... .... .++.-... ....+..+.+++.+||+.||++|| +++++++.|+
T Consensus 239 i~~----~~~i-------~~P~~~~p-------------------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 239 ISY----RDVI-------LSPIEVAP-------------------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred hhh----hhhc-------cChhhccc-------------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 000 0000 00000000 013344678999999999999996 6888888888
Q ss_pred Hhhhh
Q 039228 326 SVNNI 330 (356)
Q Consensus 326 ~i~~~ 330 (356)
.....
T Consensus 289 ~~lq~ 293 (932)
T PRK13184 289 PHLQG 293 (932)
T ss_pred HHHhc
Confidence 87654
No 108
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.5e-35 Score=266.68 Aligned_cols=215 Identities=24% Similarity=0.303 Sum_probs=166.3
Q ss_pred ccceecCceEEEEEEECCCC---eEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNR---AVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..++ ..||+|.+..... ...+.+..|+.+++.++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 46999999999999876554 7899999875433 345678899999999999999986
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.|++.||.|||..+ ++|+||||+||+++.++.++|+|||+++......... ....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~-~~~~ 156 (257)
T cd05060 81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY-RATT 156 (257)
T ss_pred cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCccc-cccc
Confidence 458889999999999999 9999999999999999999999999998664433211 1112
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
...++..|+|||.+.+..++.++||||||+++|+|++ |..||..... ..+........+ ..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~------------~~---- 218 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGER------------LP---- 218 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCc------------CC----
Confidence 2234567999999998899999999999999999998 9999964321 111111111100 00
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
.+..++..+.+++.+||+.+|++||++.+|++.|+.+.
T Consensus 219 --------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 219 --------------RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 00123446789999999999999999999999998764
No 109
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=281.39 Aligned_cols=210 Identities=22% Similarity=0.234 Sum_probs=164.0
Q ss_pred cCCCCccccceecCceEEEEEEECCCC-eEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNR-AVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+... .....+.+.+|+.+++.++||||+++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 457999999999999999999876554 78999998643 22334578899999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCCC-
Confidence 347889999999999999 999999999999999999999999999765321
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.....||+.|+|||++.+..++.++|||||||++|||++|..||..... . ..... +.....
T Consensus 185 ------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~-~~~~~--------i~~~~~ 245 (340)
T PTZ00426 185 ------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP----L-LIYQK--------ILEGII 245 (340)
T ss_pred ------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH----H-HHHHH--------HhcCCC
Confidence 2235689999999999988899999999999999999999999964211 0 00000 000000
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVHD 323 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~~ 323 (356)
. .+ ......+.+++.+|++.||.+|+ +++++++.
T Consensus 246 ~--~p------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 Y--FP------------------KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred C--CC------------------CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0 00 01122457899999999999995 78877654
No 110
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=9.9e-36 Score=271.25 Aligned_cols=223 Identities=20% Similarity=0.352 Sum_probs=172.8
Q ss_pred cCCCCccccceecCceEEEEEEECC----CCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL----NRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
.++|++.+.||+|+||.||+|.+.. ++..|++|.+.... ....+.+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4679999999999999999999876 35889999986432 3345678899999999999999986
Q ss_pred -----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccc
Q 039228 135 -----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF 179 (356)
Q Consensus 135 -----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 179 (356)
+.++.+++.||.|||+.+ ++|+||||+||+++.++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 236779999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCC
Q 039228 180 ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFP 258 (356)
Q Consensus 180 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 258 (356)
|+++.+..... ........++..|+|||++.+..++.++||||||+++||+++ |+.||..... ..+..+.....
T Consensus 162 g~~~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~- 236 (280)
T cd05043 162 ALSRDLFPMDY--HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDGY- 236 (280)
T ss_pred CCcccccCCce--EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcCC-
Confidence 99975532211 111122345678999999998889999999999999999999 9999864211 11111111100
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhh
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNI 330 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~ 330 (356)
... ....++..+.+++.+||..||++|||+.+|++.|+.+.+.
T Consensus 237 -----------~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 237 -----------RLA------------------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -----------CCC------------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 000 0012344678999999999999999999999999998764
No 111
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1e-35 Score=266.90 Aligned_cols=211 Identities=22% Similarity=0.309 Sum_probs=162.1
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999999889999999876432 2334678999999999999999986
Q ss_pred ----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCC
Q 039228 135 ----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198 (356)
Q Consensus 135 ----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 198 (356)
+.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........ ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~ 155 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY--ASTGGM 155 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccc--cccCCC
Confidence 447889999999999999 99999999999999999999999999875432111 111111
Q ss_pred ccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 199 ~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...+..|+|||.+.+..++.++||||||+++|+|++ |..||...... .. ...+........
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~------------~~~~~~~~~~~~---- 217 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QT------------REAIEQGVRLPC---- 217 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HH------------HHHHHcCCCCCC----
Confidence 223457999999998889999999999999999998 88998642211 01 111111100000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
...++..+.+++.+||+.+|++|||+.+|+++|+
T Consensus 218 --------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 --------------PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred --------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0123446789999999999999999999999986
No 112
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.8e-35 Score=276.98 Aligned_cols=248 Identities=22% Similarity=0.202 Sum_probs=173.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc-CccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.++|++.+.||+|+||.||+|.+..+++.||+|.+... .......+..|+.++++++||||+++
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 57899999999999999999999999999999998643 22344668889999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 84 ~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 84 YIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred EEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 236778999999999999 9999999999999999999999999997654322
Q ss_pred CCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCC----CchHHH
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP----NRVMDI 264 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~----~~~~~~ 264 (356)
.. ........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... ..........+. +....+
T Consensus 161 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 161 DH-TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred cc-cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCCHHHHHHh
Confidence 21 112234567899999998754 5688999999999999999999999964211 011111111111 111111
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH--HHHhh
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD--LQSVN 328 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~--L~~i~ 328 (356)
.+.............. ........+.....+.+++.+||+.+|++|||+.++++. +....
T Consensus 238 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 238 ISLRARNYIKSLPFKP----KVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred hchhhhhHHhhcCcCC----cccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 1111000000000000 000000011234567899999999999999999999987 55443
No 113
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.8e-35 Score=265.95 Aligned_cols=216 Identities=24% Similarity=0.317 Sum_probs=166.3
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchH--HHHHHHHHHhhcCCCChHHH-----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK--SFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
|++.+.||+|+||+||++....+++.||+|++......... ....|+.++++++||||+++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 67789999999999999999999999999999866443322 34569999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.|++.||.+||+.+ |+|+||||+||+++.++.++|+|||.+..... ...
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~----~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSE----NNE 153 (260)
T ss_dssp TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTS----TTS
T ss_pred cccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc----ccc
Confidence 568899999999999999 99999999999999999999999999975411 122
Q ss_pred CCCCccccccccchhhhc-CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccc
Q 039228 195 SSNGVRRTIGYTALDYDL-GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDN 273 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 273 (356)
......++..|+|||++. +..++.++|+||+|+++|+|++|..||..... .+...... ......+....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~--------~~~~~~~~~~~ 223 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIE--------KILKRPLPSSS 223 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHH--------HHHHTHHHHHT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhh--------hcccccccccc
Confidence 333466788999999998 78899999999999999999999999975410 01111100 00100000000
Q ss_pred ccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 274 KVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
. ........+.+++..||+.||++||++.++++
T Consensus 224 ~----------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 Q----------------QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp T----------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred c----------------ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 00011257899999999999999999999975
No 114
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-35 Score=266.57 Aligned_cols=213 Identities=19% Similarity=0.344 Sum_probs=164.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
++|++.+.||+|+||.||+|.++.+ ..+|+|.+... ......+.+|+.++++++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~-~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQ-IKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccC-ceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 4588899999999999999998754 68999987643 2334678899999999999999986
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||.++.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05114 82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--- 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce---
Confidence 457789999999999999 99999999999999999999999999875432211
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
.......++..|+|||++.+..++.++|+||||+++|+|++ |+.||..... ......... .. .....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~---~~------~~~~~- 223 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISR---GF------RLYRP- 223 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHC---CC------CCCCC-
Confidence 11122334568999999988889999999999999999999 8999864211 111111100 00 00000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
......+.+++.+||+.+|++||++.++++.|
T Consensus 224 --------------------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 224 --------------------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --------------------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 01223578999999999999999999999987
No 115
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2e-35 Score=266.42 Aligned_cols=217 Identities=22% Similarity=0.336 Sum_probs=161.4
Q ss_pred ccceecCceEEEEEEECC---CCeEEEEEEeecc-CccchHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+.. .+..||+|.+... .....+.+.+|+.+++.++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 368999999999998643 3468999998533 23345678899999999999999986
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
+.++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 346779999999999998 999999999999999999999999999754322111111
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcC-CCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDN 273 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 273 (356)
......++..|+|||++.+..++.++||||||+++|||++| .+||.... ........ .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~~~~~~~------------~~~~~ 220 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-----SFDITVYL------------LQGRR 220 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH------------hcCCC
Confidence 12234456789999999888899999999999999999995 56664321 11111110 00000
Q ss_pred ccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhh
Q 039228 274 KVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNN 329 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~ 329 (356)
. ......+..+.+++..||+.+|++||++.+|++.|+++..
T Consensus 221 ~---------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 221 L---------------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred C---------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0 0001223467899999999999999999999999998753
No 116
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.6e-35 Score=266.94 Aligned_cols=217 Identities=24% Similarity=0.380 Sum_probs=168.9
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
..++|++.+.||+|+||.||+|.... ++.||+|.+.... .....+.+|+.++++++|+||+++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCC-CceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEc
Confidence 34679999999999999999999764 5789999987443 334678899999999999999876
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 347889999999999998 99999999999999999999999999976542211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||...... ..... +.....
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~------------~~~~~~ 221 (260)
T cd05067 158 --TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQN------------LERGYR 221 (260)
T ss_pred --ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHH------------HHcCCC
Confidence 11123345678999999998889999999999999999999 99999643211 11111 000000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
... ....+..+.+++.+||+.+|++||++++++..|+.
T Consensus 222 ~~~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 MPR------------------PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCC------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 000 01233468899999999999999999999999874
No 117
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.3e-35 Score=267.50 Aligned_cols=216 Identities=25% Similarity=0.419 Sum_probs=167.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||+|+||.||+|.... +..||+|.+..... ..+.+.+|+.++++++|+|++++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEec
Confidence 4578999999999999999998764 46799999875433 34678999999999999998875
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+++.||.|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 457789999999999999 99999999999999999999999999976543221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......++..|+|||+..+..++.++|+||||+++|+|++ |..||...... ..... +......
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~------------~~~~~~~ 222 (260)
T cd05070 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQ------------VERGYRM 222 (260)
T ss_pred -ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHH------------HHcCCCC
Confidence 11122334667999999988889999999999999999999 89998642211 11111 1100000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
.. ....+..+.+++.+||..+|++|||+.++.+.|+.
T Consensus 223 ~~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PC------------------PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CC------------------CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00 01233468899999999999999999999999875
No 118
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2e-35 Score=270.77 Aligned_cols=220 Identities=20% Similarity=0.310 Sum_probs=168.4
Q ss_pred CCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
+|++.+.||+|+||.||+|.... +...+++|.+..... .....+.+|+.+++.++||||+++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 47888999999999999998753 235789998864432 334678899999999999999975
Q ss_pred -------------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCC
Q 039228 135 -------------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSN 165 (356)
Q Consensus 135 -------------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~N 165 (356)
+.++.+++.||.|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 246779999999999999 9999999999
Q ss_pred eEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCcccc
Q 039228 166 VLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFE 244 (356)
Q Consensus 166 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~ 244 (356)
|++++++.++|+|||+++........ .......++..|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY--VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch--hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999999754322211 11122345678999999988889999999999999999998 9999864211
Q ss_pred CCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 245 GDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.. +.+.+........ +..+...+.+++..||+.+|++||++.++++.|
T Consensus 236 -----~~---------~~~~~~~~~~~~~------------------~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l 283 (290)
T cd05045 236 -----ER---------LFNLLKTGYRMER------------------PENCSEEMYNLMLTCWKQEPDKRPTFADISKEL 283 (290)
T ss_pred -----HH---------HHHHHhCCCCCCC------------------CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 11 1111111111000 013344678999999999999999999999999
Q ss_pred HHhhh
Q 039228 325 QSVNN 329 (356)
Q Consensus 325 ~~i~~ 329 (356)
+++..
T Consensus 284 ~~~~~ 288 (290)
T cd05045 284 EKMMV 288 (290)
T ss_pred HHHHh
Confidence 98864
No 119
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.2e-35 Score=282.99 Aligned_cols=166 Identities=23% Similarity=0.277 Sum_probs=139.9
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.|++++.||+|+||.||+|++..+++.||+|++.... ......+..|+.+++.++||||+++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5889999999999999999999999999999997532 2334568899999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC-
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP- 191 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~- 191 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+......
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 336789999999999999 999999999999999999999999997643110000
Q ss_pred ------------------------------------------CccCCCCccccccccchhhhcCCCCCCccchHhHHHHH
Q 039228 192 ------------------------------------------TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILL 229 (356)
Q Consensus 192 ------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l 229 (356)
.........||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 00011235799999999999988999999999999999
Q ss_pred HHHHcCCCCCCc
Q 039228 230 LEMVTRRKPIDF 241 (356)
Q Consensus 230 ~elltg~~Pf~~ 241 (356)
|||++|..||..
T Consensus 239 ~elltG~~Pf~~ 250 (381)
T cd05626 239 FEMLVGQPPFLA 250 (381)
T ss_pred HHHHhCCCCCcC
Confidence 999999999964
No 120
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3e-35 Score=268.56 Aligned_cols=240 Identities=21% Similarity=0.243 Sum_probs=167.1
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|+||.||+|++..+|..||+|.++... ......+.+|+.++++++||||+++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4888899999999999999999999999999987532 2233567789999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---- 153 (284)
T cd07839 81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV---- 153 (284)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC----
Confidence 347889999999999999 9999999999999999999999999997553321
Q ss_pred cCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
.......++..|+|||++.+. .++.++|||||||++|+|+||..||.........+..............+.......+
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 112234568899999998764 4789999999999999999999986433222111111111111111000000000000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
... ....... ..+..........+.+++.+||+.||.+|||+.+++.
T Consensus 234 ~~~-~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 234 YKP-YPMYPAT--TSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccc-cCCCCCc--chhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000 0000000 0000111234456789999999999999999999975
No 121
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.1e-36 Score=283.79 Aligned_cols=220 Identities=20% Similarity=0.177 Sum_probs=167.5
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
...++|++.+.||+|+||.||+|.+..+++.||+|++.... ......+..|+.+++.++||||+++
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34568999999999999999999999999999999996432 2233457789999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 346789999999999999 9999999999999999999999999997653221
Q ss_pred CCCccCCCCccccccccchhhhcCC----CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS----EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
........||+.|+|||++.+. .++.++|||||||++|||++|+.||..... .... ..+.
T Consensus 197 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~--------~~i~ 260 (370)
T cd05596 197 ---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTY--------SKIM 260 (370)
T ss_pred ---cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----HHHH--------HHHH
Confidence 1122346789999999998653 378899999999999999999999964211 1111 1111
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCC--CCChHHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQD--RMNVPNAVHD 323 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~~vl~~ 323 (356)
+..-....+ ........+.+++.+||+.+|.+ ||++.+++..
T Consensus 261 ~~~~~~~~~----------------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 261 DHKNSLTFP----------------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred cCCCcCCCC----------------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 100000000 00022346688999999999988 9999999764
No 122
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-35 Score=269.80 Aligned_cols=218 Identities=25% Similarity=0.350 Sum_probs=166.5
Q ss_pred cCCCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------- 134 (356)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.+..... .....+..|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4679999999999999999999976 678999999864432 234568899999999999999986
Q ss_pred ----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC---ceEEc
Q 039228 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL---FAHIG 177 (356)
Q Consensus 135 ----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~ 177 (356)
+.++.+|+.||.|||+.+ ++|+||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence 247889999999999999 99999999999998654 58999
Q ss_pred ccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHh
Q 039228 178 DFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMA 256 (356)
Q Consensus 178 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 256 (356)
|||+++....... .........+..|+|||++.+..++.++|||||||++|||++ |..||...... ....
T Consensus 162 dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~----- 232 (277)
T cd05036 162 DFGMARDIYRASY--YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVME----- 232 (277)
T ss_pred cCccccccCCccc--eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH-----
Confidence 9999986532111 111112233567999999998899999999999999999997 99998743211 1111
Q ss_pred CCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 257 FPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 257 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.+........ +..++..+.+++.+||+.+|++||++.+|++.|+
T Consensus 233 -------~~~~~~~~~~------------------~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 -------FVTGGGRLDP------------------PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -------HHHcCCcCCC------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1110000000 0123446789999999999999999999999886
No 123
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-35 Score=270.70 Aligned_cols=218 Identities=21% Similarity=0.314 Sum_probs=166.3
Q ss_pred CCCCccccceecCceEEEEEEEC----CCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFD----LNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
++|++.+.||+|+||.||+|.+. .++..||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 46889999999999999999863 345789999987433 2334678899999999999999876
Q ss_pred ------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC
Q 039228 135 ------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL 172 (356)
Q Consensus 135 ------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~ 172 (356)
+.++.+++.||.|||+.+ ++||||||+||+++.++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 126678999999999999 99999999999999999
Q ss_pred ceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHH
Q 039228 173 FAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHN 251 (356)
Q Consensus 173 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~ 251 (356)
.+||+|||+++....... ........++..|+|||++.+..++.++|+||||+++|||++ |..||..... ....+
T Consensus 162 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~ 237 (283)
T cd05090 162 HVKISDLGLSREIYSADY--YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIE 237 (283)
T ss_pred cEEeccccccccccCCcc--eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Confidence 999999999976533221 111222345678999999988889999999999999999998 9999864211 11111
Q ss_pred HHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 252 FARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
...... .... ...++..+.+++.+||+.||++||++.+|++.|..
T Consensus 238 ~~~~~~-----------~~~~-------------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQ-----------LLPC-------------------SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCC-----------cCCC-------------------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111100 0000 01234467899999999999999999999999864
No 124
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.1e-36 Score=270.07 Aligned_cols=212 Identities=27% Similarity=0.418 Sum_probs=160.3
Q ss_pred ccccceecCceEEEEEEEC----CCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 76 LINLIGVGSFDAVYQGVFD----LNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+.+.||.|.||.||+|.+. ..+..|+||.++.... ...+.+.+|++.+++++||||+++
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 5678999999999999998 4568899999965333 346789999999999999999997
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.|+.||+.||.|||+.+ ++|+||+++||+++.++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc-
Confidence 568999999999999998 99999999999999999999999999986522111
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
............|+|||.+.+..++.++||||||+++|||++ |+.||.... ....... + .....
T Consensus 159 -~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-----~~~~~~~--------~-~~~~~ 223 (259)
T PF07714_consen 159 -YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-----NEEIIEK--------L-KQGQR 223 (259)
T ss_dssp -EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-----HHHHHHH--------H-HTTEE
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccc--------c-ccccc
Confidence 122233456778999999988889999999999999999999 789986431 1111111 0 00000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
. ..+..++..+.+++..||+.||++|||+.+|++.|
T Consensus 224 ~------------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 L------------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp T------------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred c------------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0 00113445678999999999999999999999986
No 125
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.5e-35 Score=280.45 Aligned_cols=167 Identities=22% Similarity=0.248 Sum_probs=141.5
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|....+++.||+|++.... ......+..|+.++..++||||+++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999997532 2234567889999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 347889999999999999 999999999999999999999999998754321100
Q ss_pred -------------------------------CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCC
Q 039228 192 -------------------------------TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240 (356)
Q Consensus 192 -------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~ 240 (356)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 0001124579999999999999999999999999999999999999996
Q ss_pred c
Q 039228 241 F 241 (356)
Q Consensus 241 ~ 241 (356)
.
T Consensus 238 ~ 238 (363)
T cd05628 238 S 238 (363)
T ss_pred C
Confidence 4
No 126
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.2e-35 Score=268.73 Aligned_cols=219 Identities=17% Similarity=0.203 Sum_probs=167.3
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++||||+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 3579999999999999999999998899999999975544455678889999999999999986
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---- 160 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI---- 160 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc----
Confidence 346789999999999998 9999999999999999999999999997653221
Q ss_pred cCCCCccccccccchhhhc---CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 194 SSSNGVRRTIGYTALDYDL---GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.......++..|+|||.+. ...++.++|+|||||++|||++|..||......... .......+. .+.+.
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~-------~~~~~ 232 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMSKSNFQ-------PPKLK 232 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eeeecCCCC-------CCCCc
Confidence 1122356788999999874 345778999999999999999999998532211100 000000000 00000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
........+.+++.+||..+|++||++++|++.|
T Consensus 233 --------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 233 --------------------DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred --------------------cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0012234678999999999999999999998753
No 127
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.2e-35 Score=272.02 Aligned_cols=242 Identities=21% Similarity=0.253 Sum_probs=168.9
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.++|.+.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 3579999999999999999999998999999999875432 234567789999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--- 158 (301)
T cd07873 85 YLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT--- 158 (301)
T ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---
Confidence 337789999999999999 9999999999999999999999999997543221
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......++..|+|||++.+ ..++.++|||||||++|+|++|++||...... .....................+..
T Consensus 159 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 159 -KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred -CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhcc
Confidence 11223456889999998865 45788999999999999999999999743221 111111111111111111111100
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.... ....+.................+.+|+.+||+.||.+|||+.++++
T Consensus 236 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 236 EEFK-SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccc-ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0000000000000011123445789999999999999999999986
No 128
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.8e-35 Score=270.69 Aligned_cols=214 Identities=21% Similarity=0.202 Sum_probs=164.5
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
+|++.+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48889999999999999999998899999999864321 223457789999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 347789999999999999 9999999999999999999999999987643211
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
......|+..|+|||++.+..++.++|||||||++|+|++|..||....... ...... ..+....
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~~~~---------~~~~~~~- 221 (285)
T cd05605 157 ----TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KREEVE---------RRVKEDQ- 221 (285)
T ss_pred ----ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHHHHH---------HHhhhcc-
Confidence 1123467899999999998889999999999999999999999997422110 000100 0000000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~~ 323 (356)
... .......+.+++.+||+.||++|| ++.++++.
T Consensus 222 ~~~------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 EEY------------------SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ccc------------------CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 000 012334578999999999999999 67777543
No 129
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-36 Score=280.09 Aligned_cols=214 Identities=18% Similarity=0.246 Sum_probs=176.1
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
-++|..++.+|+|+||.+++++++..+..+++|.+..... .......+|+.++++++|||||.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 3579999999999999999999999999999999975532 233467899999999999999987
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
..++.|++.|+.|||+.. |+|||||+.|||+..++.++|+|||+|+.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 568999999999999888 999999999999999999999999999987643
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
. ......+||+.|++||.+.+.+|+.|+|||||||++|||++-+++|... +....+.. .
T Consensus 160 ~----~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-----~m~~Li~k------------i 218 (426)
T KOG0589|consen 160 D----SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-----NMSELILK------------I 218 (426)
T ss_pred h----hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-----chHHHHHH------------H
Confidence 2 2455689999999999999999999999999999999999999999742 22222111 1
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+..... ..+.....++..++..|++.+|..||++.+|+.+
T Consensus 219 ~~~~~~---------------Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 219 NRGLYS---------------PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred hhccCC---------------CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 111100 0011344468899999999999999999999987
No 130
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-35 Score=286.62 Aligned_cols=159 Identities=23% Similarity=0.314 Sum_probs=137.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
..+|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|++++|+||+++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999999999999999643 2345689999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
+.++.|++.||.|||+.+ ||||||||+|||++.++.++|+|||+++....... .
T Consensus 242 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--~ 316 (461)
T PHA03211 242 YRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS--T 316 (461)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc--c
Confidence 458899999999999999 99999999999999999999999999986533211 1
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCC
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~ 240 (356)
.......||..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 12234678999999999999999999999999999999999887653
No 131
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6e-35 Score=262.08 Aligned_cols=212 Identities=21% Similarity=0.306 Sum_probs=168.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|++|.||+|.+..++..|++|.+... .......+.+|+.+++.++||||+++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 478889999999999999999999999999998643 23445678899999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 347889999999999998 99999999999999999999999999886543221
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......++..|+|||+..+..++.++|+||||+++|+|++|+.||...... .... .....
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~------------~~~~~ 216 (256)
T cd08529 157 ---FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-----ALIL------------KIIRG 216 (256)
T ss_pred ---hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----HHHH------------HHHcC
Confidence 122346788999999999988999999999999999999999999643211 1000 00000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... .........+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~---------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 217 VFP---------------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCC---------------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 000 0001233467899999999999999999999864
No 132
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.3e-36 Score=279.33 Aligned_cols=206 Identities=20% Similarity=0.238 Sum_probs=159.7
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
+.||+|+||.||++.+..++..||+|++.... ......+..|+.++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999997532 2234567789999999999999986
Q ss_pred -----------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 -----------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~----~~~ 153 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG----ATM 153 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC----ccc
Confidence 3478899999999997 67 9999999999999999999999999987432211 122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||+.|+|||++.+..++.++|||||||++|+|++|..||..... ....... .......
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~~~i------------~~~~~~~- 215 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELI------------LMEEIRF- 215 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHHHHH------------hcCCCCC-
Confidence 335689999999999999999999999999999999999999964211 1111100 0000000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVHD 323 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~~ 323 (356)
+......+.+++.+||+.||++|+ ++.++++.
T Consensus 216 ---------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 ---------------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ---------------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 001223567899999999999997 88888753
No 133
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.1e-35 Score=269.46 Aligned_cols=217 Identities=23% Similarity=0.327 Sum_probs=167.1
Q ss_pred CCCCccccceecCceEEEEEEEC-----CCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFD-----LNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+|...+.||+|+||.||++... .++..+|+|.+..........+.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45788899999999999999743 3467899999876655566789999999999999999876
Q ss_pred ----------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCce
Q 039228 135 ----------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA 174 (356)
Q Consensus 135 ----------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 174 (356)
+.++.|++.||+|||+.+ ++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 236679999999999999 9999999999999999999
Q ss_pred EEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHH
Q 039228 175 HIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFA 253 (356)
Q Consensus 175 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~ 253 (356)
+|+|||++........ ........+++.|+|||++.+..++.++|||||||++|||++ |.+||...... .....
T Consensus 162 kL~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~- 236 (280)
T cd05092 162 KIGDFGMSRDIYSTDY--YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--EAIEC- 236 (280)
T ss_pred EECCCCceeEcCCCce--eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--HHHHH-
Confidence 9999999875432111 111223345678999999999999999999999999999998 99998642211 11000
Q ss_pred HHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 254 RMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
+....... .+..++..+.+++.+||+.||++||++.+|++.|+
T Consensus 237 -----------~~~~~~~~------------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 237 -----------ITQGRELE------------------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -----------HHcCccCC------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 00000000 00123446789999999999999999999999986
No 134
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-35 Score=275.63 Aligned_cols=215 Identities=20% Similarity=0.192 Sum_probs=161.1
Q ss_pred CCCccccceecCceEEEEEEEC---CCCeEEEEEEeecc----CccchHHHHHHHHHHhhcC-CCChHHH----------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFD---LNRAVVAIKVLSIQ----CQGASKSFMAECKALKNIC-HRNLVRF---------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~-h~niv~l---------- 134 (356)
+|++.+.||+|+||.||+++.. .+++.||+|++... .....+.+..|+.++..++ ||||+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5889999999999999998874 46799999998643 1223456788999999995 8999986
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 347789999999999999 99999999999999999999999999975432
Q ss_pred CCCCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
... .......||+.|+|||++.+. .++.++|||||||++|||++|..||....... ........... .+
T Consensus 158 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~~~~~~------~~ 227 (332)
T cd05614 158 EEK---ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEVSRRILK------CD 227 (332)
T ss_pred cCC---CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHHHHHHhc------CC
Confidence 221 122345789999999999765 47889999999999999999999996432211 11111111000 00
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVH 322 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~ 322 (356)
+.+. ......+.+++.+||+.||++|| +++++++
T Consensus 228 ~~~~----------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 228 PPFP----------------------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCC----------------------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 0000 02233567899999999999999 6667764
No 135
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=281.22 Aligned_cols=208 Identities=25% Similarity=0.310 Sum_probs=166.7
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
|.-++.||.|+||.||-|++..+.+.||||.++.... +....++.|+..|++++|||++.+
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 5556789999999999999999999999999975543 334578999999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..|+.+.+.||+|||+++ .||||||..|||+++.|.|||+|||.|...
T Consensus 108 ClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~-------- 176 (948)
T KOG0577|consen 108 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIM-------- 176 (948)
T ss_pred HhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhc--------
Confidence 236778999999999999 999999999999999999999999999754
Q ss_pred cCCCCccccccccchhhhc---CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 194 SSSNGVRRTIGYTALDYDL---GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
...+.++||+.|||||++. .+.|+.++||||||++..|+.-.++|+..+..- .....+... -.|.+.
T Consensus 177 ~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM--SALYHIAQN--------esPtLq 246 (948)
T KOG0577|consen 177 APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQN--------ESPTLQ 246 (948)
T ss_pred CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH--HHHHHHHhc--------CCCCCC
Confidence 3445699999999999986 467999999999999999999999997654211 110001110 111121
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.. +-...+.+++..||+.-|.+|||..+++..
T Consensus 247 s~---------------------eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 SN---------------------EWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred Cc---------------------hhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 11 333457899999999999999999988754
No 136
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=4.4e-35 Score=274.14 Aligned_cols=248 Identities=19% Similarity=0.196 Sum_probs=172.5
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.++|++.+.||.|+||.||+|....+++.||+|++.... ....+.+.+|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367999999999999999999999999999999987542 2345677889999999999999976
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 346789999999999999 999999999999999999999999999765433
Q ss_pred CCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
............++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... ................+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~~g~~~~~~~~~ 238 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSVLGSPSEEVLNR 238 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHHhCCChhHhhhh
Confidence 3222222334578889999998865 45889999999999999999999999643211 11111111111111111110
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.............+......+..........+.+++.+||+.+|++||++.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000000000000000000000011335578999999999999999999998873
No 137
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.5e-35 Score=274.60 Aligned_cols=205 Identities=20% Similarity=0.208 Sum_probs=157.7
Q ss_pred ccceecCceEEEEEEEC---CCCeEEEEEEeeccC----ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 78 NLIGVGSFDAVYQGVFD---LNRAVVAIKVLSIQC----QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+.||+|+||.||+++.. .+++.||+|++.... ......+..|+.+++.++||||+++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999864 467899999987431 2233467789999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 154 (323)
T cd05584 82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---- 154 (323)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC----
Confidence 236779999999999999 9999999999999999999999999987432211
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDN 273 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 273 (356)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....... +....
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~~~~~------------~~~~~ 217 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKTIDKI------------LKGKL 217 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHHHHHH------------HcCCC
Confidence 122335689999999999988899999999999999999999999964211 1111111 11000
Q ss_pred ccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHH
Q 039228 274 KVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVH 322 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~ 322 (356)
. .+......+.+++.+||+.||++|| ++.++++
T Consensus 218 ~----------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 N----------------LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred C----------------CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0 0002233568999999999999999 7787766
No 138
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-35 Score=278.74 Aligned_cols=156 Identities=24% Similarity=0.358 Sum_probs=134.1
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
...+|++.+.||+|+||.||+|....++..||+|+.... ....|+.++++++||||+++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 346799999999999999999999989999999985422 23569999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++.....
T Consensus 138 ~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 210 (357)
T PHA03209 138 HYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---- 210 (357)
T ss_pred ccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC----
Confidence 347889999999999999 999999999999999999999999999743221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCC
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf 239 (356)
.......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 -PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred -cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223456899999999999999999999999999999999865554
No 139
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.5e-35 Score=271.83 Aligned_cols=223 Identities=21% Similarity=0.300 Sum_probs=169.6
Q ss_pred hhcCCCCccccceecCceEEEEEEECCC-----CeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH-------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLN-----RAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF------- 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l------- 134 (356)
...++|++.+.||+|+||.||+|..... ...+|+|.+.... ......+.+|+.++.++ +|+||+++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 3456799999999999999999997643 3789999987532 23345688999999999 79999865
Q ss_pred ----------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe
Q 039228 135 ----------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL 168 (356)
Q Consensus 135 ----------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll 168 (356)
+.++.|++.||.|||+.+ |+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence 137889999999999998 9999999999999
Q ss_pred CCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCc
Q 039228 169 DNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDL 247 (356)
Q Consensus 169 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~ 247 (356)
+.++.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--- 240 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYY--RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--- 240 (293)
T ss_pred cCCCeEEeCccccccccccccce--eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH---
Confidence 99999999999999865432211 11122334677999999988889999999999999999998 9999863211
Q ss_pred cHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 248 NLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.+... .+....... .+..+...+.+|+.+||+.||++|||+.++++.|+.+
T Consensus 241 --~~~~~---------~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 241 --EELFK---------LLKEGYRME------------------KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred --HHHHH---------HHHcCCcCC------------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 11111 111100000 0113344678999999999999999999999999887
Q ss_pred h
Q 039228 328 N 328 (356)
Q Consensus 328 ~ 328 (356)
.
T Consensus 292 ~ 292 (293)
T cd05053 292 L 292 (293)
T ss_pred h
Confidence 4
No 140
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.8e-35 Score=266.43 Aligned_cols=221 Identities=21% Similarity=0.386 Sum_probs=168.4
Q ss_pred cCCCCccccceecCceEEEEEEECCCCe---EEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRA---VVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.++|+..+.||+|+||.||+|....++. .+|+|.+.... ....+.+..|+.++++++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 3568889999999999999999875543 79999986542 2335678899999999999999876
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 457889999999999999 999999999999999999999999999765432
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.... ........+..|+|||++.+..++.++|||||||++|||++ |..||..... ...... +..
T Consensus 161 ~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~~~---------i~~ 225 (268)
T cd05063 161 PEGT-YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVMKA---------IND 225 (268)
T ss_pred cccc-eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHH---------Hhc
Confidence 2111 11111223457999999988889999999999999999998 9999864221 111111 110
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
...... ...++..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 226 ~~~~~~------------------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 GFRLPA------------------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCC------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000 012344678999999999999999999999999875
No 141
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.2e-35 Score=270.46 Aligned_cols=216 Identities=19% Similarity=0.203 Sum_probs=170.5
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
..+|++.+.||+|+||.||+|++..+++.||+|.+........+.+.+|+.+++.++|||++++
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 4579999999999999999999988899999999986655556788899999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++....... .
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~----~ 171 (296)
T cd06654 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----S 171 (296)
T ss_pred cCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc----c
Confidence 457789999999999999 9999999999999999999999999987543221 1
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
......+++.|+|||.+.+..++.++|||||||++|+|++|+.||....... .+........ +.+. .
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-~~~~~~~~~~---------~~~~-~-- 238 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGT---------PELQ-N-- 238 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-hHHHHhcCCC---------CCCC-C--
Confidence 1223467889999999998889999999999999999999999996422111 0000000000 0000 0
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.......+.+++.+||..+|++||++.+|+..
T Consensus 239 -----------------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 239 -----------------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -----------------ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 01233457889999999999999999999973
No 142
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.6e-35 Score=272.76 Aligned_cols=204 Identities=22% Similarity=0.218 Sum_probs=155.3
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhh-cCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKN-ICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|+++... ....+.+..|..++.. .+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999999999999999997532 2233455667777764 479999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~----~~~ 153 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE----GKA 153 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC----Ccc
Confidence 347889999999999999 9999999999999999999999999997542211 223
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||+.|+|||++.+..++.++|||||||++|||++|..||..... ....... ... ....+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i--------~~~--~~~~~-- 216 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSI--------LND--RPHFP-- 216 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHH--------HcC--CCCCC--
Confidence 346789999999999998999999999999999999999999974321 1111110 000 00000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH-HHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP-NAV 321 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-~vl 321 (356)
......+.+++.+||+.||.+||++. +++
T Consensus 217 ----------------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 217 ----------------RWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ----------------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 01233567899999999999999875 453
No 143
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.5e-35 Score=263.95 Aligned_cols=213 Identities=23% Similarity=0.327 Sum_probs=162.5
Q ss_pred cceecCceEEEEEEEC--CCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------------
Q 039228 79 LIGVGSFDAVYQGVFD--LNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------------- 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------------- 134 (356)
.||+|+||.||+|.+. .++..||+|++..... ...+.+.+|+.++++++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 4899999999999875 4456799999875433 234568899999999999999976
Q ss_pred ----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCC
Q 039228 135 ----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198 (356)
Q Consensus 135 ----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 198 (356)
+.++.+++.||.|||+++ ++||||||+||+++.++.+||+|||++.......... .....
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~ 157 (257)
T cd05115 82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY-KARSA 157 (257)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccce-eccCC
Confidence 457889999999999999 9999999999999999999999999997554322211 11112
Q ss_pred ccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 199 ~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
..++..|+|||.+.+..++.++||||||+++|++++ |..||...... .... .+........
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~------------~~~~~~~~~~---- 219 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMS------------FIEQGKRLDC---- 219 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHH------------HHHCCCCCCC----
Confidence 233568999999988889999999999999999996 99999743211 1111 1111100000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
+..++..+.+++.+||..+|++||++.+|.+.|+.+
T Consensus 220 --------------~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 --------------PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred --------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 013445678999999999999999999999999865
No 144
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.4e-35 Score=264.22 Aligned_cols=210 Identities=24% Similarity=0.390 Sum_probs=165.5
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
.+|++.+.||+|+||.||+|... +..||+|.+... ...+.+.+|+.++++++|+|++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 46899999999999999999876 678999998643 234678899999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.++.+++.||+|||+++ ++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 457889999999999999 9999999999999999999999999987543211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
....++..|+|||++.+..++.++|||||||++|+|++ |+.||... ......... .....
T Consensus 157 -----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~---------~~~~~ 217 (256)
T cd05082 157 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRV---------EKGYK 217 (256)
T ss_pred -----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHH---------hcCCC
Confidence 12334567999999998889999999999999999997 99998632 111111110 00000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.. ....++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 218 ~~------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 MD------------------APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CC------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00 0013345678999999999999999999999999764
No 145
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.4e-35 Score=265.50 Aligned_cols=214 Identities=20% Similarity=0.329 Sum_probs=165.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
++|++.+.||+|+||.||.|.+... ..+|+|.+.... .....+.+|+.++++++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~-~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCC-CcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 4688899999999999999987643 569999886432 334678999999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
+.++.+|+.||.|||+.+ ++|+||||+||+++.++.+||+|||.++.......
T Consensus 82 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05113 82 SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--- 155 (256)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCce---
Confidence 458889999999999999 99999999999999999999999999875532211
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
.......++..|++||++.+..++.++||||||+++|+|++ |..||...... ...... .. .....
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~-----------~~-~~~~~ 221 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKV-----------SQ-GLRLY 221 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHH-----------hc-CCCCC
Confidence 11122345678999999988889999999999999999999 99998643211 010100 00 00000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.. ......+.+++.+||+.+|.+||++.+|++.|+
T Consensus 222 ~~------------------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 RP------------------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CC------------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00 012346789999999999999999999998773
No 146
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.9e-35 Score=268.20 Aligned_cols=235 Identities=20% Similarity=0.296 Sum_probs=173.0
Q ss_pred CCCCccccceecCceEEEEEEECC----CCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDL----NRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
++|++.+.||+|+||.||+|.+.. ++..||+|.+...... ..+.+.+|+.+++.++||||+++
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 457888999999999999999753 4789999999755443 45679999999999999999986
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 347789999999999999 9999999999999999999999999998664
Q ss_pred cCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC-chHHHh
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN-RVMDIV 265 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 265 (356)
..... ........++..|++||.+.+..++.++||||||+++|||++|..|+......... +....... ....+.
T Consensus 161 ~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~ 236 (284)
T cd05038 161 EDKDY-YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLL 236 (284)
T ss_pred cCCcc-eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHH
Confidence 22211 11111233456799999998888999999999999999999999998643221111 00000000 011111
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
+ .+..... ......++..+.+++.+||+.+|++||||.+|+++|+.+.
T Consensus 237 ~-~~~~~~~--------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 237 E-LLKEGER--------------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred H-HHHcCCc--------------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1 1110000 0001134467889999999999999999999999998863
No 147
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=282.55 Aligned_cols=160 Identities=26% Similarity=0.356 Sum_probs=136.5
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CC-----ChHHH------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HR-----NLVRF------------ 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l------------ 134 (356)
+|.+.++||+|.||.|.+|.+..|++.||||+++.. .....+...|+.+|..|+ |. |+|++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 578999999999999999999999999999999754 334456678999999997 42 67765
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC--CCceEEcccccccccc
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN--DLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~ 186 (356)
..++.||+.||.+||+.+ |||+||||+||||.+ ...+||+|||.+.+..
T Consensus 266 VfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 266 VFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred eehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccccC
Confidence 347889999999999999 999999999999964 4479999999998654
Q ss_pred cCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccc
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMF 243 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~ 243 (356)
... -....+..|+|||++.|.+|+.+.||||||||+.||++|.+.|.+..
T Consensus 343 q~v-------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 343 QRV-------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred Ccc-------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 321 14667889999999999999999999999999999999988887543
No 148
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.3e-35 Score=272.70 Aligned_cols=202 Identities=23% Similarity=0.216 Sum_probs=156.1
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhc-CCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNI-CHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.++.+++.||+|++... .......+..|..++..+ +||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999999999999999998743 223345677888888876 69999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||+++..... ....
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~----~~~~ 153 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN----GKTT 153 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC----CCcc
Confidence 347789999999999999 999999999999999999999999998753211 1122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....... .......
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i------------~~~~~~~- 215 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAI------------LNDEVVY- 215 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHH------------hcCCCCC-
Confidence 345789999999999998999999999999999999999999964221 1111111 1000000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPN 319 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~ 319 (356)
+......+.+++.+||+.||++||++.+
T Consensus 216 ---------------~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 216 ---------------PTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred ---------------CCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 0012235689999999999999999833
No 149
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.6e-35 Score=274.57 Aligned_cols=205 Identities=22% Similarity=0.235 Sum_probs=158.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCC-hHHH--------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRN-LVRF-------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~n-iv~l-------------- 134 (356)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+..|..++..++|++ |+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5889999999999999999999999999999997532 234466788999999998765 5544
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~--- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG--- 154 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC---
Confidence 347889999999999999 999999999999999999999999998643211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...... +.....
T Consensus 155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~~--------i~~~~~-- 218 (324)
T cd05587 155 -GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-----DELFQS--------IMEHNV-- 218 (324)
T ss_pred -CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHH--------HHcCCC--
Confidence 1122345689999999999999999999999999999999999999964221 111110 000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCCh
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNV 317 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 317 (356)
... ......+.+++.+||..||.+||+.
T Consensus 219 ~~~------------------~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 219 SYP------------------KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCC------------------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 000 0122356789999999999999986
No 150
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.7e-35 Score=266.43 Aligned_cols=216 Identities=19% Similarity=0.238 Sum_probs=166.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
++|.+.+.||+|+||.||+|.+..+++.||+|.++.........+.+|+.+++.++||||+++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 468889999999999999999998999999999976654455668889999999999999886
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~----~ 161 (267)
T cd06645 89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI----A 161 (267)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc----c
Confidence 347889999999999999 9999999999999999999999999987553221 1
Q ss_pred CCCCccccccccchhhhc---CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 195 SSNGVRRTIGYTALDYDL---GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......|+..|+|||++. ...++.++|+|||||++|+|++|..||....... ........... .+....
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-~~~~~~~~~~~-------~~~~~~ 233 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-ALFLMTKSNFQ-------PPKLKD 233 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-hHHhhhccCCC-------CCcccc
Confidence 223456889999999874 4568889999999999999999999985322111 00000000000 000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.......+.+++.+||+.+|++||++++|++
T Consensus 234 --------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 234 --------------------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred --------------------cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0012235678999999999999999999875
No 151
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.9e-35 Score=275.09 Aligned_cols=206 Identities=23% Similarity=0.241 Sum_probs=158.3
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhc-CCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNI-CHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l------------------- 134 (356)
+.||+|+||.||+|++..+++.||+|++.... ......+..|..++..+ +||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36899999999999999999999999987532 23345677888888865 79999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~----~~~ 153 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG----VTT 153 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC----ccc
Confidence 347889999999999999 9999999999999999999999999987532211 122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...... .......
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----~~~~~~------------i~~~~~~-- 214 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----DDLFES------------ILHDDVL-- 214 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----HHHHHH------------HHcCCCC--
Confidence 345689999999999998999999999999999999999999974321 111111 1110000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-------ChHHHHHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-------NVPNAVHD 323 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-------s~~~vl~~ 323 (356)
. +......+.+++.+||+.||++|| ++.++++.
T Consensus 215 ---~-----------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 215 ---Y-----------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred ---C-----------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 0 001223567899999999999999 66777643
No 152
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-35 Score=281.10 Aligned_cols=237 Identities=20% Similarity=0.201 Sum_probs=167.4
Q ss_pred cCCCCccccceecCceEEEEEEECC--CCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL--NRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
..+|.+.+.||.|+||.||+|.... ++..||+|.+... ....+|+.+|+.++||||+++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 4579999999999999999997643 4678999987633 335689999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+.++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++........
T Consensus 166 e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-- 240 (392)
T PHA03207 166 PKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-- 240 (392)
T ss_pred hhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcccc--
Confidence 457889999999999999 99999999999999999999999999976543221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCC--ccHHHHHHHh------CCCch-HH
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD--LNLHNFARMA------FPNRV-MD 263 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~--~~~~~~~~~~------~~~~~-~~ 263 (356)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+....... ++... ..
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 122234678999999999999999999999999999999999999996543221 1111111111 11100 00
Q ss_pred Hhhhhhccccccccc-cccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 264 IVNLVLLNDNKVLAG-TNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 264 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+....-.-....+.. ..+..+.. ......+.+++.+||..||++|||+.+++..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVIRK------YGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHhhcccccCCccccchhhc------cCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000000000 00000000 0123356789999999999999999999875
No 153
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.5e-35 Score=276.84 Aligned_cols=157 Identities=24% Similarity=0.343 Sum_probs=133.8
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhc-CCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNI-CHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|++.... ......+..|+.++.++ +||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36899999999999999999999999997542 23345677888888776 79999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~----~~~ 153 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG----DTT 153 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC----Ccc
Confidence 347789999999999999 9999999999999999999999999987432211 122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
....||..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 346789999999999999999999999999999999999999964
No 154
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.6e-35 Score=282.15 Aligned_cols=166 Identities=23% Similarity=0.282 Sum_probs=139.6
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.|++++.||+|+||.||+|+...+++.||+|++.... ......+.+|+.+++.++||||+++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5889999999999999999999999999999987432 2334568889999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC--
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN-- 190 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-- 190 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 346789999999999999 99999999999999999999999999753211000
Q ss_pred -----------------------------------------CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHH
Q 039228 191 -----------------------------------------PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILL 229 (356)
Q Consensus 191 -----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l 229 (356)
..........||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 000011235789999999999999999999999999999
Q ss_pred HHHHcCCCCCCc
Q 039228 230 LEMVTRRKPIDF 241 (356)
Q Consensus 230 ~elltg~~Pf~~ 241 (356)
|||++|+.||..
T Consensus 239 ~elltG~~Pf~~ 250 (382)
T cd05625 239 YEMLVGQPPFLA 250 (382)
T ss_pred HHHHhCCCCCCC
Confidence 999999999964
No 155
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5.8e-35 Score=263.40 Aligned_cols=217 Identities=18% Similarity=0.226 Sum_probs=167.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-----cchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-----GASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
++|.+.+.||+|++|.||.|....+++.||+|.+..... ...+.+.+|+.++++++||||+++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 579999999999999999999998899999999864321 123567889999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||+++......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 347789999999999999 9999999999999999999999999997653321
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.. ........++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ....... .....
T Consensus 159 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~---------~~~~~ 224 (263)
T cd06625 159 SS-GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIFKI---------ATQPT 224 (263)
T ss_pred cc-cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHHHH---------hccCC
Confidence 11 1111235577899999999998899999999999999999999999864211 1111000 00000
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... .+......+.+++.+||..+|++|||+.++++.
T Consensus 225 ~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 NPQ------------------LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCC------------------CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000 001233457899999999999999999999864
No 156
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7e-35 Score=262.89 Aligned_cols=215 Identities=24% Similarity=0.397 Sum_probs=167.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
++|.+...||+|+||.||+|.+..+ ..+|+|.+.... ...+.+.+|+.++++++|||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCC
Confidence 5688999999999999999998765 469999876432 234678899999999999999876
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc---
Confidence 357789999999999999 99999999999999999999999999976533221
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
.......++..|+|||+..+..++.++||||||+++|+|++ |..||...... ........... ..
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~------------~~ 223 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERGYR------------MP 223 (260)
T ss_pred cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC------------CC
Confidence 11222345678999999998889999999999999999999 99998643211 11111100000 00
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
.....+..+.+++.+||+.||++||++++|++.|+.
T Consensus 224 ------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 ------------------CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ------------------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 001234467899999999999999999999999975
No 157
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.2e-35 Score=273.87 Aligned_cols=205 Identities=21% Similarity=0.227 Sum_probs=157.9
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcC-CCChHHH--------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNIC-HRNLVRF-------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l-------------- 134 (356)
+|.+.+.||+|+||.||+|++..+++.||+|++.... ......+..|..++..+. |++|+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5888999999999999999999999999999987542 223345677888887774 7777765
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~--- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD--- 154 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC---
Confidence 457889999999999999 999999999999999999999999998743211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +.....
T Consensus 155 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-----~~~~~--------i~~~~~-- 218 (323)
T cd05616 155 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQS--------IMEHNV-- 218 (323)
T ss_pred -CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-----HHHHH--------HHhCCC--
Confidence 11223466899999999999999999999999999999999999999742211 11111 000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCCh
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNV 317 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 317 (356)
..+ ......+.+++.+|++.||.+|++.
T Consensus 219 ~~p------------------~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 AYP------------------KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCC------------------CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 000 0223356899999999999999985
No 158
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.2e-35 Score=279.87 Aligned_cols=169 Identities=23% Similarity=0.289 Sum_probs=142.8
Q ss_pred HHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH---------
Q 039228 67 LLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF--------- 134 (356)
Q Consensus 67 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l--------- 134 (356)
+....++|++.+.||+|+||.||+|.+..+++.||+|++... .......+..|+.+++.++||||+++
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 344567899999999999999999999999999999998642 12234567789999999999999987
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 347789999999999999 99999999999999999999999999986532
Q ss_pred CCCCCccCCCCccccccccchhhhcCCC----CCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSE----VSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.. ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||..
T Consensus 195 ~~---~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 195 TG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred CC---ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 21 11223467899999999987543 78899999999999999999999964
No 159
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1e-35 Score=277.94 Aligned_cols=215 Identities=18% Similarity=0.162 Sum_probs=164.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|.+.+.||+|+||.||+|.+..+++.||+|+++... ....+.+..|+.+++.++||||+++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46999999999999999999999999999999997542 2234567889999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 236789999999999999 99999999999999999999999999976543221
Q ss_pred CCccCCCCccccccccchhhhc------CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 191 PTQSSSNGVRRTIGYTALDYDL------GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
.......||+.|+|||++. ...++.++|||||||++|+|++|..||..... ..... .+
T Consensus 158 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~--------~i 221 (330)
T cd05601 158 ---VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----AKTYN--------NI 221 (330)
T ss_pred ---eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----HHHHH--------HH
Confidence 1222346899999999986 45678999999999999999999999964221 11111 11
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.......... ........+.+|+..|+. +|.+||++.+++.
T Consensus 222 ~~~~~~~~~~----------------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 222 MNFQRFLKFP----------------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HcCCCccCCC----------------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 1000000000 000223356789999997 9999999999875
No 160
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5.5e-35 Score=269.75 Aligned_cols=221 Identities=21% Similarity=0.276 Sum_probs=168.6
Q ss_pred cCCCCccccceecCceEEEEEEEC-----CCCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH---------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFD-----LNRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF--------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l--------- 134 (356)
.++|.+.+.||+|+||.||+|.+. .++..||+|.++... ....+.+.+|+.+++++ +||||+++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 346999999999999999999852 345689999987543 23345788999999999 79999987
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccccc
Confidence 347789999999999998 99999999999999999999999999975
Q ss_pred cccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHH
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMD 263 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 263 (356)
...... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||....... .+..
T Consensus 191 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~------------ 255 (302)
T cd05055 191 IMNDSN--YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYK------------ 255 (302)
T ss_pred ccCCCc--eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHH------------
Confidence 533221 111223345778999999998889999999999999999998 999986432111 1111
Q ss_pred HhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 264 IVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 264 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.+......... ......+.+++.+||+.+|++|||+.+|++.|++.
T Consensus 256 ~~~~~~~~~~~------------------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 256 LIKEGYRMAQP------------------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHcCCcCCCC------------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11111100000 01223578999999999999999999999999864
No 161
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.9e-35 Score=262.60 Aligned_cols=217 Identities=20% Similarity=0.267 Sum_probs=170.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||.|+||.||+|.+..+++.+++|.+........+.+.+|+.++++++||||+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 3679999999999999999999988889999999986655566789999999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 155 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--- 155 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh---
Confidence 347889999999999999 9999999999999999999999999987654321
Q ss_pred ccCCCCccccccccchhhhcCC---CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 193 QSSSNGVRRTIGYTALDYDLGS---EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|..||....... .........+.. ..
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-~~~~~~~~~~~~-------~~- 225 (262)
T cd06613 156 -AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR-ALFLISKSNFPP-------PK- 225 (262)
T ss_pred -hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCCC-------cc-
Confidence 122335678889999998776 78899999999999999999999986432111 000000000000 00
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.......+..+.+++.+||..+|.+|||+.+|+.
T Consensus 226 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 -------------------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -------------------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0011134456889999999999999999999975
No 162
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=292.22 Aligned_cols=222 Identities=21% Similarity=0.373 Sum_probs=180.4
Q ss_pred CCCCccccceecCceEEEEEEECCCC---eEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNR---AVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
...+|.++||.|.||.||.|+++..+ ..||||.++....+ ....|+.|+.||.+++||||++|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 45678899999999999999997654 57999999866544 44679999999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++++|+.|+.||.+.+ +|||||.+.|||++.+..+|++|||+++.+.+..
T Consensus 709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 568899999999999999 9999999999999999999999999999876554
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
.. .....+..-...|.|||.+...+++.+||||||||+|||.++ |..||=++...+ .... +...
T Consensus 786 ~~-~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd--VIka------------Ie~g 850 (996)
T KOG0196|consen 786 EA-AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VIKA------------IEQG 850 (996)
T ss_pred Cc-cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH--HHHH------------HHhc
Confidence 22 222233334678999999999999999999999999999887 999985443221 1111 1111
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhh
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNN 329 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~ 329 (356)
.. ..-+.+|+..|.+||+.||+.|-..||.+.+|+.+|+++..
T Consensus 851 yR------------------LPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 851 YR------------------LPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred cC------------------CCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 11 11223899999999999999999999999999999988753
No 163
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.2e-35 Score=265.54 Aligned_cols=221 Identities=22% Similarity=0.386 Sum_probs=168.1
Q ss_pred CCCCccccceecCceEEEEEEECCCCe---EEEEEEeecc-CccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRA---VVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
++|++.+.||+|+||.||+|.+..++. .||+|.+... .....+.+..|+.+++.++||||+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 458889999999999999999876543 6999998754 23345679999999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
+.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 457789999999999999 9999999999999999999999999987654322
Q ss_pred CCCc-cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 190 NPTQ-SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.... ........+..|+|||++.+..++.++|||||||++|||++ |..||...... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~~~~---------- 228 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIEQDY---------- 228 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCC----------
Confidence 1111 11111112457999999998899999999999999999887 99998642211 1111111000
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.. .....++..+.+++..||+.+|++||++.+|+..|+++
T Consensus 229 --~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 --RL------------------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --cC------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 00013344678999999999999999999999999865
No 164
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.9e-35 Score=269.12 Aligned_cols=223 Identities=21% Similarity=0.300 Sum_probs=169.4
Q ss_pred cCCCCccccceecCceEEEEEEEC-------CCCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH-------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFD-------LNRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l------- 134 (356)
.++|.+.+.||+|+||.||+|... ..+..||+|.+.... ......+.+|+.+++.+ +||||+++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456889999999999999999752 234579999986432 23446788999999999 79999986
Q ss_pred ----------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe
Q 039228 135 ----------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL 168 (356)
Q Consensus 135 ----------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll 168 (356)
+.++.||+.||.|||+++ ++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence 124669999999999999 9999999999999
Q ss_pred CCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCc
Q 039228 169 DNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDL 247 (356)
Q Consensus 169 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~ 247 (356)
+.++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---- 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---- 244 (304)
T ss_pred cCCCcEEECCCccceeccccccc--ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC----
Confidence 99999999999999865432211 11222345678999999988889999999999999999998 788875321
Q ss_pred cHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 248 NLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
........ ....... ....++..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 245 -~~~~~~~~---------~~~~~~~------------------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~ 296 (304)
T cd05101 245 -VEELFKLL---------KEGHRMD------------------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296 (304)
T ss_pred -HHHHHHHH---------HcCCcCC------------------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence 11111111 0000000 0013445678999999999999999999999999887
Q ss_pred hhh
Q 039228 328 NNI 330 (356)
Q Consensus 328 ~~~ 330 (356)
...
T Consensus 297 ~~~ 299 (304)
T cd05101 297 LTL 299 (304)
T ss_pred HHh
Confidence 654
No 165
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.9e-35 Score=266.56 Aligned_cols=233 Identities=23% Similarity=0.266 Sum_probs=165.7
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|++|.||+|+...++..||+|.+.... ....+.+.+|+.+++.++||||+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4888999999999999999999889999999986442 2234678899999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (285)
T cd07861 81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-- 155 (285)
T ss_pred CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc--
Confidence 347889999999999999 9999999999999999999999999997543221
Q ss_pred CccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCC--Cc----hHHH
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP--NR----VMDI 264 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~--~~----~~~~ 264 (356)
.......+++.|+|||++.+. .++.++||||||+++|+|+||++||....... ........... .. ....
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 156 --RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred --ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhcchhh
Confidence 112234568889999988654 47889999999999999999999997432211 11111110000 00 0000
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+... .. +.+...............+.+++.+||..||++|||+.+|+.
T Consensus 233 ~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 233 PDYKN--TF-------PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHh--hc-------cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000 00 000000000001123446689999999999999999999875
No 166
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.6e-35 Score=263.49 Aligned_cols=213 Identities=22% Similarity=0.343 Sum_probs=164.1
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
.+|++.+.||+|+||.||+|.+.. +..+|+|.+.... .....+.+|+.+++.++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 358889999999999999998864 5789999986432 234578889999999999999975
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
+.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~---~ 155 (256)
T cd05059 82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ---Y 155 (256)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccc---c
Confidence 457889999999999999 9999999999999999999999999997653221 1
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
.......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ........ .....
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~------------~~~~~ 221 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESVSA------------GYRLY 221 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHHHc------------CCcCC
Confidence 11122233567999999998899999999999999999999 89998642211 11111000 00000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
. +..++..+.+++.+||+.+|++|||+.+|++.|
T Consensus 222 ~------------------~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 R------------------PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred C------------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0 012344688999999999999999999999987
No 167
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.4e-35 Score=267.72 Aligned_cols=209 Identities=21% Similarity=0.192 Sum_probs=158.9
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
||+|+||.||++....+++.||+|.+.... ......+..|+.++++++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999999999999999986432 1223455679999999999999976
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-----~~~ 152 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-----TIT 152 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-----eee
Confidence 346789999999999999 9999999999999999999999999987654321 112
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...|+..|+|||++.+..++.++|||||||++|||++|+.||....... ............. ....
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~--------~~~~----- 218 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTLEDE--------VKFE----- 218 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhhccc--------cccc-----
Confidence 3457889999999998889999999999999999999999996432111 1111111111000 0000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.......+.+++.+||+.||++||++.++++.+
T Consensus 219 --------------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 219 --------------HQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred --------------cccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 002233568999999999999999998876443
No 168
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.1e-35 Score=264.85 Aligned_cols=217 Identities=20% Similarity=0.351 Sum_probs=165.6
Q ss_pred CCccccceecCceEEEEEEECC---CCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
|.+.+.||+|+||.||+|.+.. ++..||||++.... ....+.+.+|+.+++.++||||+++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5678899999999999998643 57899999986542 3345678899999999999998654
Q ss_pred -----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccc
Q 039228 135 -----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF 179 (356)
Q Consensus 135 -----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 179 (356)
..++.|++.||+|||+.+ |+||||||+||+++.++.++|+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 346788999999999998 999999999999999999999999
Q ss_pred ccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCC
Q 039228 180 ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFP 258 (356)
Q Consensus 180 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 258 (356)
|+++....... ........++..|++||.+.+..++.++||||||+++|+|++ |.+||..... ..........
T Consensus 158 g~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~-- 231 (273)
T cd05074 158 GLSKKIYSGDY--YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKG-- 231 (273)
T ss_pred cccccccCCcc--eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcC--
Confidence 99986533211 111122334567999999998889999999999999999999 8899864321 1111111000
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
. .+. .....+..+.+++.+||+.+|++||++.+|++.|+.+
T Consensus 232 ~--------~~~--------------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 N--------RLK--------------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred C--------cCC--------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 000 0012334688999999999999999999999999876
No 169
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=285.86 Aligned_cols=210 Identities=23% Similarity=0.317 Sum_probs=168.9
Q ss_pred CccccceecCceEEEEEEECCCCeEEEEEEeecc----CccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 75 PLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ----CQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+...+||+|+|-+||+|.+..+|..||--.++.. .....++|..|+.+|+.|+||||+++
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 3456899999999999999999999987665422 33445789999999999999999998
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC-CCCceEEcccccccccccCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLD-NDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..|++||+.||.|||++ .+||||||||.+||+|+ ..|.+||+|+|+|..+..
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~--- 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK--- 198 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc---
Confidence 35999999999999998 48999999999999997 568999999999987643
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.....+.||+.|||||+.. ..|+..+||||||+.++||+|+..||..................|..+..+-|+
T Consensus 199 ---s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dP--- 271 (632)
T KOG0584|consen 199 ---SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDP--- 271 (632)
T ss_pred ---cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCH---
Confidence 2333489999999999987 789999999999999999999999998654333223332222223333333332
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
++.++|.+|+.. ..+|||+.|||..
T Consensus 272 ---------------------------evr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 272 ---------------------------EVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ---------------------------HHHHHHHHHhcC-chhccCHHHHhhC
Confidence 357899999999 9999999999864
No 170
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5e-35 Score=267.39 Aligned_cols=233 Identities=18% Similarity=0.281 Sum_probs=169.2
Q ss_pred CCCccccceecCceEEEEEEE----CCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVF----DLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
.|++++.||+|+||.||+|.+ ..++..||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 478899999999999999985 3467899999986443 3334678899999999999999876
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
+.++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccccc
Confidence 457789999999999999 99999999999999999999999999986543
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-CCchHHHhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-PNRVMDIVN 266 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 266 (356)
.... ........++..|+|||++.+..++.++||||||+++|+|+++..|+..... .+........ .......+.
T Consensus 162 ~~~~-~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 162 DKEY-YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMT---LFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred Cccc-eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccc---hhhhhcccccccccHHHHHH
Confidence 2211 1112234567789999999888899999999999999999998776532111 0000000000 000011110
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
....+.. ......++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 238 ~~~~~~~---------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGKR---------------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCcc---------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000000 000113445789999999999999999999999999876
No 171
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.3e-35 Score=274.83 Aligned_cols=201 Identities=26% Similarity=0.257 Sum_probs=154.0
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHH-HHhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECK-ALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|++.... ......+..|.. +++.++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36899999999999999999999999997432 222344555554 5678999999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~----~~~~ 153 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH----SKTT 153 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC----CCcc
Confidence 347889999999999999 999999999999999999999999998743221 1222
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.... ........ +.....-
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i--------~~~~~~~----- 215 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDNI--------LNKPLRL----- 215 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHHH--------HcCCCCC-----
Confidence 34568999999999999999999999999999999999999996421 11111111 1100000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP 318 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 318 (356)
.......+.+++.+||+.||.+||++.
T Consensus 216 ---------------~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 ---------------KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ---------------CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 001233568999999999999999985
No 172
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.8e-35 Score=267.14 Aligned_cols=207 Identities=24% Similarity=0.250 Sum_probs=158.7
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
||+|+||+||++.+..+++.||+|.+..... ...+.+..|+.+++.++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 6999999999999999999999999864322 223567789999999999999976
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~----~~ 153 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ----SK 153 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCC----cc
Confidence 347789999999999999 9999999999999999999999999997554322 12
Q ss_pred CCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ............. . .
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~--------~--~--- 219 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILNDS--------V--T--- 219 (280)
T ss_pred ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcccC--------C--C---
Confidence 234568999999999999999999999999999999999999996432111 1111111110000 0 0
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVH 322 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~ 322 (356)
.....+..+.+++.+||+.||++|| +++++++
T Consensus 220 ---------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 220 ---------------YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred ---------------CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 0012344678999999999999999 5556654
No 173
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3e-35 Score=274.75 Aligned_cols=157 Identities=24% Similarity=0.342 Sum_probs=134.4
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhc-CCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNI-CHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|+++... ......+..|..++..+ +||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999999999999999997532 23345678899999988 69999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----~~~~ 153 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP----GDTT 153 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC----CCcc
Confidence 457889999999999999 999999999999999999999999998742211 1122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
....||+.|+|||++.+..++.++|+|||||++|+|++|+.||+.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 346789999999999999999999999999999999999999964
No 174
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.4e-35 Score=266.36 Aligned_cols=218 Identities=23% Similarity=0.339 Sum_probs=167.2
Q ss_pred cCCCCccccceecCceEEEEEEECCC-----CeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLN-----RAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------- 134 (356)
.++|.+.+.||+|+||.||+|..... +..||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 45789999999999999999998643 4789999986443 2334578899999999999999976
Q ss_pred -------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEc
Q 039228 135 -------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIG 177 (356)
Q Consensus 135 -------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 177 (356)
+.++.|++.||.|||+.+ |+||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 226679999999999998 9999999999999999999999
Q ss_pred ccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHh
Q 039228 178 DFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMA 256 (356)
Q Consensus 178 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 256 (356)
|||+++....... ........++..|+|||.+.+..++.++|||||||++||+++ |..||...... .......
T Consensus 162 dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~~-- 235 (277)
T cd05032 162 DFGMTRDIYETDY--YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVLKFVI-- 235 (277)
T ss_pred CcccchhhccCcc--cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHHHHHh--
Confidence 9999875533221 111223445778999999988889999999999999999998 99998632211 1111110
Q ss_pred CCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 257 FPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 257 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
+.... .. +..++..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 236 ---------~~~~~-~~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 ---------DGGHL-DL------------------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ---------cCCCC-CC------------------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 00000 00 0123446789999999999999999999999986
No 175
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.7e-35 Score=272.84 Aligned_cols=205 Identities=20% Similarity=0.192 Sum_probs=159.1
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhc-CCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNI-CHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|++.... ......+..|..++..+ +||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999999999999999997542 23345677888898887 69999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----~~~ 153 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG----VTT 153 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC----Ccc
Confidence 347789999999999999 9999999999999999999999999986432111 122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....|+..|+|||++.+..++.++|||||||++|+|++|+.||..... ....... ...... .
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~~~~i--------~~~~~~--~--- 215 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DELFQSI--------LEDEVR--Y--- 215 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHHHHHH--------HcCCCC--C---
Confidence 335689999999999999999999999999999999999999964221 1111110 000000 0
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCCh-----HHHHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNV-----PNAVH 322 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~~vl~ 322 (356)
+......+.+++.+||+.||.+||++ .++++
T Consensus 216 ---------------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 216 ---------------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ---------------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 00223357899999999999999999 77765
No 176
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.3e-35 Score=269.95 Aligned_cols=221 Identities=22% Similarity=0.306 Sum_probs=166.4
Q ss_pred cCCCCccccceecCceEEEEEEECCCCe--EEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRA--VVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l------------ 134 (356)
.++|++.+.||+|+||.||+|.+..++. .+|+|.+.... ......+.+|+.++.++ +||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 3578999999999999999999876664 45777765432 23345788899999999 89999876
Q ss_pred -----------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCc
Q 039228 135 -----------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF 173 (356)
Q Consensus 135 -----------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 173 (356)
+.++.|++.||+|||+.+ ++||||||+|||++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence 135678999999999999 999999999999999999
Q ss_pred eEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHH
Q 039228 174 AHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNF 252 (356)
Q Consensus 174 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~ 252 (356)
++|+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||..... ...
T Consensus 163 ~kl~dfg~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~ 232 (303)
T cd05088 163 AKIADFGLSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AEL 232 (303)
T ss_pred EEeCccccCcccchh-----hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-----HHH
Confidence 999999998632211 11111223567999999988889999999999999999998 9999863221 111
Q ss_pred HHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 253 ARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 253 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
... +........ .......+.+++.+||+.+|++||++.+++++|..+.+.-
T Consensus 233 ~~~---------~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 233 YEK---------LPQGYRLEK------------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred HHH---------HhcCCcCCC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 110 000000000 0022335789999999999999999999999999887654
No 177
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.2e-35 Score=270.27 Aligned_cols=160 Identities=24% Similarity=0.322 Sum_probs=131.1
Q ss_pred cccceecCceEEEEEEECC--CCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 77 INLIGVGSFDAVYQGVFDL--NRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
...||+|+||.||+|+... ++..||+|.+.... ....+.+|+.+++.++||||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3579999999999999754 56889999986432 23467889999999999999875
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe----CCCCceEEccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL----DNDLFAHIGDFELAR 183 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~a~ 183 (356)
..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 246789999999999999 9999999999999 567899999999998
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
........ ........+|..|+|||++.+ ..++.++|||||||++|||+||++||...
T Consensus 161 ~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCccc-ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 65432211 122334678999999999876 45789999999999999999999999643
No 178
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=9.8e-35 Score=272.85 Aligned_cols=223 Identities=21% Similarity=0.258 Sum_probs=167.8
Q ss_pred cCCCCccccceecCceEEEEEEEC-----CCCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHHHH-------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFD-----LNRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRFIS------- 136 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~------- 136 (356)
.++|++.+.||+|+||.||+|.+. .+++.||||+++... ......+.+|+.++.++ +||||+++++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 467999999999999999999852 456899999997543 22345688999999999 6899998721
Q ss_pred --------------------------------------------------------------------------------
Q 039228 137 -------------------------------------------------------------------------------- 136 (356)
Q Consensus 137 -------------------------------------------------------------------------------- 136 (356)
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence
Q ss_pred ------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCC
Q 039228 137 ------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198 (356)
Q Consensus 137 ------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 198 (356)
++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++........ ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~ 240 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKGD 240 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcc--hhhcCC
Confidence 3558999999999999 99999999999999999999999999976532211 111222
Q ss_pred ccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 199 ~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
..++..|+|||.+.+..++.++||||||+++|+|++ |..||....... .+... +........
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~------------~~~~~~~~~---- 303 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR------------LKEGTRMRA---- 303 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHH------------HhccCCCCC----
Confidence 345677999999988889999999999999999997 999986432110 11110 000000000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhh
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNN 329 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~ 329 (356)
+......+.+++..||+.||++|||+.+|++.|+.+.+
T Consensus 304 --------------~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 304 --------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred --------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00112357899999999999999999999999998765
No 179
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.4e-35 Score=281.92 Aligned_cols=167 Identities=23% Similarity=0.271 Sum_probs=139.8
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++++.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+|+.++||||+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36999999999999999999999999999999986432 2234567889999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC-
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN- 190 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 190 (356)
..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 336789999999999999 99999999999999999999999999753210000
Q ss_pred --------------------------------------CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHH
Q 039228 191 --------------------------------------PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEM 232 (356)
Q Consensus 191 --------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~el 232 (356)
..........||+.|+|||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 000111235789999999999999999999999999999999
Q ss_pred HcCCCCCCc
Q 039228 233 VTRRKPIDF 241 (356)
Q Consensus 233 ltg~~Pf~~ 241 (356)
++|+.||..
T Consensus 238 l~G~~Pf~~ 246 (376)
T cd05598 238 LVGQPPFLA 246 (376)
T ss_pred hhCCCCCCC
Confidence 999999964
No 180
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5.8e-35 Score=268.22 Aligned_cols=225 Identities=22% Similarity=0.322 Sum_probs=167.0
Q ss_pred cCCCCccccceecCceEEEEEEECCCC----------------eEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHH
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNR----------------AVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVR 133 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~----------------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 133 (356)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ....+.+.+|+.++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 457999999999999999999876533 568999987543 234567889999999999999987
Q ss_pred H------------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCC
Q 039228 134 F------------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSN 165 (356)
Q Consensus 134 l------------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~N 165 (356)
+ +.++.|++.||.|||+.+ |+|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 5 246789999999999999 9999999999
Q ss_pred eEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc--CCCCCCccc
Q 039228 166 VLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT--RRKPIDFMF 243 (356)
Q Consensus 166 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt--g~~Pf~~~~ 243 (356)
|+++.++.++|+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY--YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcc--eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 9999999999999999875432211 112223445778999999988889999999999999999998 677876432
Q ss_pred cCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 244 EGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.. .........+... ..... ...+..++..+.+++.+||+.||++|||+.+|++.
T Consensus 239 ~~--~~~~~~~~~~~~~-----~~~~~------------------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 239 DQ--QVIENAGHFFRDD-----GRQIY------------------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred hH--HHHHHHHhccccc-----ccccc------------------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 11 1111111000000 00000 00011233568999999999999999999999998
Q ss_pred HH
Q 039228 324 LQ 325 (356)
Q Consensus 324 L~ 325 (356)
|+
T Consensus 294 L~ 295 (296)
T cd05051 294 LQ 295 (296)
T ss_pred hc
Confidence 85
No 181
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6e-35 Score=279.10 Aligned_cols=224 Identities=24% Similarity=0.280 Sum_probs=170.5
Q ss_pred hcCCCCccccceecCceEEEEEEECCC-----CeEEEEEEeeccCc-cchHHHHHHHHHHhhcC-CCChHHHH-------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLN-----RAVVAIKVLSIQCQ-GASKSFMAECKALKNIC-HRNLVRFI------- 135 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~------- 135 (356)
..++|.+.+.||+|+||.||+|.+... +..||||++..... ...+.+.+|+.+++++. ||||++++
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 356799999999999999999987432 35799999964432 33457899999999996 99999871
Q ss_pred --------------------------------------------------------------------------------
Q 039228 136 -------------------------------------------------------------------------------- 135 (356)
Q Consensus 136 -------------------------------------------------------------------------------- 135 (356)
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence
Q ss_pred ----------------------------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC
Q 039228 136 ----------------------------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLD 169 (356)
Q Consensus 136 ----------------------------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~ 169 (356)
.++.|++.||.|||+.+ |+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence 15568999999999998 99999999999999
Q ss_pred CCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCcc
Q 039228 170 NDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLN 248 (356)
Q Consensus 170 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~ 248 (356)
.++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||....... .
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-~ 348 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSN--YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-T 348 (400)
T ss_pred CCCEEEEEeCCcceecccccc--ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-H
Confidence 999999999999976533221 112233456778999999998899999999999999999997 999986432211 1
Q ss_pred HHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 249 LHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
+...... .... .....++..+.+++.+||+.||++||++.+|.++|+++.
T Consensus 349 ~~~~~~~------------~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 349 FYNKIKS------------GYRM------------------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHHHhc------------CCCC------------------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1000000 0000 001134456789999999999999999999999998765
Q ss_pred h
Q 039228 329 N 329 (356)
Q Consensus 329 ~ 329 (356)
+
T Consensus 399 ~ 399 (400)
T cd05105 399 P 399 (400)
T ss_pred C
Confidence 3
No 182
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.2e-34 Score=262.78 Aligned_cols=220 Identities=21% Similarity=0.311 Sum_probs=170.0
Q ss_pred CCCCccccceecCceEEEEEEECCC---CeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLN---RAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
++|.+.+.||.|+||.||+|.+... ...||+|...... ....+.+.+|+.++++++||||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~ 85 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM 85 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence 4588899999999999999987543 3578999987554 3445678999999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
+.++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.......
T Consensus 86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 347789999999999999 99999999999999999999999999976543221
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.......++..|+|||.+....++.++||||||+++||+++ |..||....... ......... .+
T Consensus 163 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~----------~~ 227 (270)
T cd05056 163 ---YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIENGE----------RL 227 (270)
T ss_pred ---eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCC----------cC
Confidence 11112334567999999988889999999999999999986 999996432211 101000000 00
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhh
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNN 329 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~ 329 (356)
. ....++..+.+++.+||..+|++|||+.++++.|+.+..
T Consensus 228 -~-------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 228 -P-------------------MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred -C-------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 001334467899999999999999999999999998865
No 183
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.1e-35 Score=271.73 Aligned_cols=204 Identities=21% Similarity=0.198 Sum_probs=155.9
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhh-cCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKN-ICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|++..++..||+|+++... ......+..|..++.. ++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999997532 2234556778888775 489999986
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||+++...... ...
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~ 153 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD----NRA 153 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC----Cce
Confidence 347789999999999999 9999999999999999999999999986432111 122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||..|+|||++.+..++.++|||||||++|||++|..||..... ....... .... ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-----~~~~~~~---------~~~~-~~~~-- 216 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-----DELFESI---------RVDT-PHYP-- 216 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHH---------HhCC-CCCC--
Confidence 346689999999999999999999999999999999999999964221 1111110 0000 0000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH-HHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP-NAV 321 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-~vl 321 (356)
......+.+++.+||+.||++||++. +++
T Consensus 217 ----------------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 217 ----------------RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ----------------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 01223567899999999999999984 554
No 184
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=7.1e-35 Score=262.03 Aligned_cols=212 Identities=25% Similarity=0.366 Sum_probs=168.0
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||.|+||.||+|... ++.||+|.+..... ..+++.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 457899999999999999999976 68999999975543 46789999999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 347789999999999999 99999999999999999999999999986532111
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
....+..|+|||++....++.++||||||+++|+|++ |..||...... .+...... ...
T Consensus 158 ------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~------------~~~ 217 (256)
T cd05039 158 ------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEK------------GYR 217 (256)
T ss_pred ------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhc------------CCC
Confidence 2234567999999988889999999999999999997 99998632111 11111100 000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
.. .....+..+.+++.+||..+|++|||+.+|+++|+.+
T Consensus 218 ~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 218 ME------------------APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CC------------------CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00 0012344678999999999999999999999999764
No 185
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.9e-35 Score=279.89 Aligned_cols=167 Identities=20% Similarity=0.221 Sum_probs=139.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|.+.+.||+|+||.||+|....+++.||||++.... ....+.+.+|+.+++.++||||+++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999986432 2234567889999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC-
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN- 190 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 190 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 236889999999999999 99999999999999999999999999863211000
Q ss_pred -----------CC-------------------------------ccCCCCccccccccchhhhcCCCCCCccchHhHHHH
Q 039228 191 -----------PT-------------------------------QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGIL 228 (356)
Q Consensus 191 -----------~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~ 228 (356)
.. ........||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 00 000012468999999999999999999999999999
Q ss_pred HHHHHcCCCCCCc
Q 039228 229 LLEMVTRRKPIDF 241 (356)
Q Consensus 229 l~elltg~~Pf~~ 241 (356)
+|||++|..||..
T Consensus 238 l~elltG~~Pf~~ 250 (377)
T cd05629 238 MFECLIGWPPFCS 250 (377)
T ss_pred hhhhhcCCCCCCC
Confidence 9999999999964
No 186
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.4e-35 Score=262.17 Aligned_cols=212 Identities=17% Similarity=0.195 Sum_probs=167.1
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
+|++.+.||.|+||.||++.+..+++.||+|.++... ....+.+..|+.+++.++|+||+++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4888999999999999999999999999999986432 3345678889999999999999876
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+.++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 154 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--- 154 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc---
Confidence 347889999999999999 9999999999999999999999999997654321
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
.......++..|+|||++.+..++.++|+||||+++|+|++|..||.... ........ ....
T Consensus 155 -~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~------------~~~~ 216 (255)
T cd08219 155 -AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILKV------------CQGS 216 (255)
T ss_pred -cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHHH------------hcCC
Confidence 11223567889999999998889999999999999999999999996321 11111110 0000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... .+......+.+++.+||+.||++||++.+|+..
T Consensus 217 ~~~---------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 YKP---------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCC---------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 000 001223356799999999999999999999864
No 187
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.2e-34 Score=262.79 Aligned_cols=234 Identities=20% Similarity=0.224 Sum_probs=167.8
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
++|++...||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++|||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46889999999999999999999889999999986432 2233567899999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-- 155 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc--
Confidence 458889999999999999 99999999999999999999999999986543221
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC--CCchHHHhhhh-
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF--PNRVMDIVNLV- 268 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~- 268 (356)
......++..|+|||++.+ ..++.++||||||+++|+|++|..||......+ .......... ........+..
T Consensus 156 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 156 --DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred --cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHhhhccccc
Confidence 1223456788999999876 457889999999999999999999997533211 1111111000 00000010000
Q ss_pred -----hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 269 -----LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 269 -----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
...... ... ............+.+++.+||+.+|++||++.+++.
T Consensus 233 ~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 233 FFKGLSIPEPE----TRE-----PLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccccCCCcc----ccc-----CHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000 000 000001123456789999999999999999999875
No 188
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.1e-35 Score=267.89 Aligned_cols=224 Identities=21% Similarity=0.306 Sum_probs=164.8
Q ss_pred CCCCccccceecCceEEEEEEECCC--------------CeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH--
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLN--------------RAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF-- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~--------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l-- 134 (356)
++|++.+.||+|+||.||+|....+ ...||+|.++... ......+.+|++++++++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5799999999999999999987543 2358999987542 2334568899999999999999876
Q ss_pred -----------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeE
Q 039228 135 -----------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVL 167 (356)
Q Consensus 135 -----------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIl 167 (356)
+.++.+++.||.|||+.+ ++|+||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 236789999999999999 999999999999
Q ss_pred eCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc--CCCCCCccccC
Q 039228 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT--RRKPIDFMFEG 245 (356)
Q Consensus 168 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt--g~~Pf~~~~~~ 245 (356)
++.++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EcCCCcEEecccccccccccCcc--eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 99999999999999975432211 112223445678999999988889999999999999999988 66777642211
Q ss_pred CccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 246 DLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.........+... ....... .....+..+.+++.+||+.||++|||+++|++.|+
T Consensus 240 --~~~~~~~~~~~~~-----~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 --QVIENTGEFFRNQ-----GRQIYLS------------------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred --HHHHHHHHhhhhc-----cccccCC------------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1111111000000 0000000 00123346899999999999999999999999986
No 189
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.2e-35 Score=265.16 Aligned_cols=215 Identities=21% Similarity=0.284 Sum_probs=166.1
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhc-CCCChHHH-------------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNI-CHRNLVRF------------- 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l------------- 134 (356)
.+.+.|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+..|+.++.++ +|+||+++
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35677999999999999999999999999999999987543 3346788999999998 69999975
Q ss_pred --------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccc
Q 039228 135 --------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELA 182 (356)
Q Consensus 135 --------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 182 (356)
..++.|++.||+|||+.+ |+|+||+|+||+++.++.++|+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCc
Confidence 337789999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCccCCCCccccccccchhhhc-----CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC
Q 039228 183 RFRQEVSNPTQSSSNGVRRTIGYTALDYDL-----GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF 257 (356)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~ 257 (356)
....... .......|+..|+|||++. +..++.++|||||||++|||++|..||...... .......
T Consensus 159 ~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~~~~~~~- 229 (272)
T cd06637 159 AQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALFLIP- 229 (272)
T ss_pred eeccccc----ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----HHHHHHh-
Confidence 7543221 1223466889999999986 345788999999999999999999998632211 1100000
Q ss_pred CCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 258 PNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 258 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
... ..... ...++..+.+++.+||..+|.+|||+.++++
T Consensus 230 ~~~-----~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNP-----APRLK---------------------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCC-----CCCCC---------------------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 000 00000 0023345789999999999999999999975
No 190
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.6e-34 Score=266.81 Aligned_cols=168 Identities=25% Similarity=0.361 Sum_probs=139.5
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.++|++.+.||+|+||.||+|....+++.||||.+.... ......+.+|+.++++++||||+++
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 467999999999999999999999999999999986432 2223456789999999999999875
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
..++.|++.||.|||+++ ++|+||+|+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 347789999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.................++..|+|||.+.+. .++.++||||||+++|+|++|..||..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~ 226 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQG 226 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 6543322111222345678889999988664 368899999999999999999999864
No 191
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.6e-35 Score=268.22 Aligned_cols=224 Identities=18% Similarity=0.265 Sum_probs=164.7
Q ss_pred CCCCccccceecCceEEEEEEECC----------------CCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDL----------------NRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 134 (356)
++|++.+.||+|+||.||++.+.. +...||+|++.... ......+.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 569999999999999999986432 34579999987543 2334678899999999999999865
Q ss_pred ------------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCe
Q 039228 135 ------------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNV 166 (356)
Q Consensus 135 ------------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NI 166 (356)
+.++.+++.||+|||+.+ ++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 235778999999999999 99999999999
Q ss_pred EeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc--CCCCCCcccc
Q 039228 167 LLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT--RRKPIDFMFE 244 (356)
Q Consensus 167 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt--g~~Pf~~~~~ 244 (356)
+++.++.++|+|||+++.+..... ........++..|++||...++.++.++|+|||||++|||++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc--eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 999999999999999975532221 111222334678999999888889999999999999999998 7788864221
Q ss_pred CCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 245 GDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
. +.... ............. ......++..+.+++.+||+.||.+||++.+|++.|
T Consensus 240 ~-----~~~~~-----~~~~~~~~~~~~~---------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 294 (296)
T cd05095 240 E-----QVIEN-----TGEFFRDQGRQVY---------------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATL 294 (296)
T ss_pred H-----HHHHH-----HHHHHhhcccccc---------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHH
Confidence 1 11100 0000000000000 000013445688999999999999999999999998
Q ss_pred H
Q 039228 325 Q 325 (356)
Q Consensus 325 ~ 325 (356)
+
T Consensus 295 ~ 295 (296)
T cd05095 295 L 295 (296)
T ss_pred h
Confidence 6
No 192
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.3e-34 Score=262.26 Aligned_cols=217 Identities=19% Similarity=0.220 Sum_probs=166.3
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
..++++.....||+|+||.||+|.+..++..||+|.+........+.+.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 345666667789999999999999998899999999876665566789999999999999999987
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC-CCceEEccccccccccc
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN-DLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+.+ |+||||||+||+++. ++.++|+|||++.....
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 236679999999999998 999999999999976 67999999999875532
Q ss_pred CCCCCccCCCCccccccccchhhhcCCC--CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSE--VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
.. .......++..|+|||++.+.. ++.++|+||||+++|+|++|..||......... .+.....
T Consensus 162 ~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~--~~~~~~~-------- 227 (268)
T cd06624 162 IN----PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA--MFKVGMF-------- 227 (268)
T ss_pred CC----CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh--Hhhhhhh--------
Confidence 21 1122245788999999986643 788999999999999999999998643211100 0000000
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..... .+......+.+++.+||+.+|.+|||+.+|+.
T Consensus 228 --~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 228 --KIHPE------------------IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --ccCCC------------------CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00000 00123345789999999999999999999986
No 193
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.1e-34 Score=263.46 Aligned_cols=213 Identities=20% Similarity=0.246 Sum_probs=168.5
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|++.+.||.|++|.||+|.+..+++.||+|.+.... ......+.+|+.+++.++|+||+++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888999999999999999999999999999987543 3344678899999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~----~ 153 (274)
T cd06609 81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM----S 153 (274)
T ss_pred eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc----c
Confidence 457889999999999999 9999999999999999999999999998665332 1
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
......++..|+|||++.+..++.++||||||+++|+|++|..||...... ..... +.........
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~~~~~------------~~~~~~~~~~ 219 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--RVLFL------------IPKNNPPSLE 219 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--HHHHH------------hhhcCCCCCc
Confidence 223356788899999999888999999999999999999999999643211 00000 0000000000
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
. ...+..+.+++.+||..+|++|||++++++
T Consensus 220 ~-----------------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 G-----------------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred c-----------------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 013345788999999999999999999987
No 194
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.7e-35 Score=265.75 Aligned_cols=212 Identities=21% Similarity=0.273 Sum_probs=164.3
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
|++.+.||.|+||.||+|.+..++..+++|.+........+.+.+|+.+++.++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 6788899999999999999999999999999876555556778899999999999999987
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ..
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----~~ 159 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI----QR 159 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc----cc
Confidence 347789999999999999 9999999999999999999999999987543211 12
Q ss_pred CCCccccccccchhhhc-----CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 196 SNGVRRTIGYTALDYDL-----GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.....++..|+|||++. +..++.++|||||||++|+|++|.+||....... ........ .+ +.+.
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~-~~--------~~~~ 229 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKS-EP--------PTLA 229 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhc-CC--------CCCC
Confidence 23356788999999974 3457789999999999999999999986422110 00000000 00 0000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+......+.+++.+||+.||.+||++.++++
T Consensus 230 --------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 230 --------------------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00123346789999999999999999998864
No 195
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.3e-34 Score=272.93 Aligned_cols=245 Identities=19% Similarity=0.140 Sum_probs=172.4
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
..++|++.+.||+|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++||||+++
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 357799999999999999999999999999999998643 22334567889999999999999865
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||+++....
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 236789999999999999 99999999999999999999999999976533
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC--CCchHHHh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF--PNRVMDIV 265 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~ 265 (356)
.. ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ........... +..+...+
T Consensus 171 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 171 SF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred CC-----CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHh
Confidence 21 122345788999999999999999999999999999999999999643211 11111111110 01111111
Q ss_pred hhhhcccccccc----ccccchhhhh-----chhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 266 NLVLLNDNKVLA----GTNSNMLRKT-----KMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 266 ~~~l~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+..+........ .......... ...........+.+++.+||+.||++|||+.+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111100000000 0000000000 000011234567899999999999999999999864
No 196
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.8e-35 Score=272.93 Aligned_cols=205 Identities=25% Similarity=0.256 Sum_probs=155.2
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHH-HHhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECK-ALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36899999999999999999999999987432 122234444544 5678999999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~----~~~ 153 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----GTT 153 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC----CCc
Confidence 337789999999999999 9999999999999999999999999987432211 122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||+.|+|||++.+..++.++|||||||++|+|++|..||..... ...... +.......
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~--------i~~~~~~~----- 215 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDN--------ILNKPLQL----- 215 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHH--------HHhCCcCC-----
Confidence 346789999999999999999999999999999999999999964211 111111 11100000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.......+.+++.+||+.||.+||++.+.+.
T Consensus 216 ---------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 216 ---------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred ---------------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 0022335688999999999999999875443
No 197
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1e-34 Score=262.90 Aligned_cols=220 Identities=20% Similarity=0.373 Sum_probs=167.9
Q ss_pred CCCCccccceecCceEEEEEEECCC---CeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLN---RAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
++|++.+.||+|+||.||+|.+..+ +..+|+|.+.... ....+.+..|+.++++++||||+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 5688999999999999999988643 3479999986443 2234678899999999999999986
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
+.++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 457889999999999999 9999999999999999999999999998654322
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
.. ........++..|++||++.+..++.++|+||||+++|++++ |..||...... ..........
T Consensus 161 ~~-~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~----------- 226 (267)
T cd05066 161 EA-AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEGY----------- 226 (267)
T ss_pred ce-eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCCC-----------
Confidence 11 111122233567999999998889999999999999999887 99998643211 1111111000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
... ....++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 227 -~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 -RLP------------------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -cCC------------------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000 0012334678999999999999999999999999875
No 198
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=7.8e-35 Score=266.72 Aligned_cols=223 Identities=20% Similarity=0.311 Sum_probs=167.9
Q ss_pred hhcCCCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH--------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF-------- 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l-------- 134 (356)
...++|++.+.||+|+||.||+|..+. .+..||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 346789999999999999999997642 346899999864432 233467889999999999999986
Q ss_pred ---------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceE
Q 039228 135 ---------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAH 175 (356)
Q Consensus 135 ---------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 175 (356)
..++.|++.||.|||+++ |+||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence 126778999999999999 99999999999999999999
Q ss_pred EcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHH
Q 039228 176 IGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFAR 254 (356)
Q Consensus 176 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~ 254 (356)
|+|||+++....... ........++..|+|||.+.+..++.++|+|||||++|||++ |..||..... .....
T Consensus 160 L~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----~~~~~ 232 (288)
T cd05061 160 IGDFGMTRDIYETDY--YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----EQVLK 232 (288)
T ss_pred ECcCCcccccccccc--ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH
Confidence 999999875432211 111122344678999999998889999999999999999998 7889864221 11111
Q ss_pred HhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 255 MAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
. +.+...... ...++..+.+++.+||+.||++|||+.++++.|++..
T Consensus 233 ~--------~~~~~~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 233 F--------VMDGGYLDQ-------------------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred H--------HHcCCCCCC-------------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 0 011000000 0123346889999999999999999999999987753
No 199
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.8e-34 Score=262.68 Aligned_cols=212 Identities=21% Similarity=0.249 Sum_probs=166.8
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
.|+..+.||.|+||.||+|.+..++..||+|.+.... ....+.+.+|+.++++++||||+++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3677788999999999999998889999999987443 3344678899999999999999998
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----~~ 157 (277)
T cd06642 85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----IK 157 (277)
T ss_pred CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc----hh
Confidence 347789999999999998 9999999999999999999999999987654221 11
Q ss_pred CCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
.....++..|+|||++.+..++.++|+||||+++|||++|..||....... ... .+........
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~------------~~~~~~~~~~-- 221 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLF------------LIPKNSPPTL-- 221 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHh------------hhhcCCCCCC--
Confidence 223457888999999998889999999999999999999999986432111 000 0000000000
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
...++..+.+++.+||+.+|++||++.+|++.
T Consensus 222 ----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 ----------------EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ----------------CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 01234467899999999999999999999984
No 200
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.2e-35 Score=270.32 Aligned_cols=204 Identities=25% Similarity=0.270 Sum_probs=155.9
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhh-cCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKN-ICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|+++... ......+..|..++.. ++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36899999999999999999999999997542 2234556678888875 589999986
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~ 153 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD----AKT 153 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC----Cce
Confidence 347889999999999999 9999999999999999999999999987432111 122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||..|+|||++.+..++.++|||||||++|||++|..||..... .......... .+...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i~~~---------~~~~~------ 216 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSIRMD---------NPCYP------ 216 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC---------CCCCC------
Confidence 345689999999999998999999999999999999999999964211 0111111000 00000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH-HHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP-NAV 321 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-~vl 321 (356)
......+.+++.+||+.||++||++. ++.
T Consensus 217 ----------------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 217 ----------------RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ----------------ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 01223467899999999999999997 554
No 201
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.4e-35 Score=267.74 Aligned_cols=238 Identities=20% Similarity=0.183 Sum_probs=179.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
..+|++.+.||.|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 3469999999999999999999998999999999976655556788899999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~----~ 170 (296)
T cd06655 98 LAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ----S 170 (296)
T ss_pred cCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccc----c
Confidence 447788999999999999 9999999999999999999999999987543321 1
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
......++..|+|||.+.+..++.++|+|||||++|+|++|+.||....... .... ...... +.+.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-~~~~-~~~~~~--------~~~~---- 236 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-ALYL-IATNGT--------PELQ---- 236 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHhcCC--------cccC----
Confidence 1223457889999999988889999999999999999999999996432110 0000 000000 0000
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhccccccccCCcCCcccccc
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLPETVFKSLTNNRAPKLKA 350 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~~~~~~~~~~~~~~~~~~ 350 (356)
........+.+++.+||..||.+||++.+|+.. +-+.....+..++-+-.|+.++
T Consensus 237 ----------------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~-----~~~~~~~~~~~~~~~~~~~~~~ 291 (296)
T cd06655 237 ----------------NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH-----PFLKLAKPLSSLTPLILAAKEA 291 (296)
T ss_pred ----------------CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC-----hHhhhccccccCCccccchhhh
Confidence 001233457789999999999999999999842 2222223345555555555443
No 202
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=277.47 Aligned_cols=228 Identities=23% Similarity=0.364 Sum_probs=187.0
Q ss_pred HHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------
Q 039228 65 ESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------- 134 (356)
Q Consensus 65 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------- 134 (356)
..|.....+....++||-|.||.||.|+|+.-.-.||||.++.. ....++|+.|+.+|+.++|||+|++
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 44555555677888999999999999999988889999998743 5667899999999999999999998
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccc
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR 185 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 185 (356)
+.++.||..|+.||..++ +|||||...|+|+.++..+|++|||+++++
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhh
Confidence 346789999999999998 999999999999999999999999999987
Q ss_pred ccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 186 QEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
.... .....+..-.+-|.|||-+..+.++.++|||+|||+|||+.| |-.||.+. ++.+ +..+
T Consensus 416 tgDT---YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSq---------VY~L 478 (1157)
T KOG4278|consen 416 TGDT---YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQ---------VYGL 478 (1157)
T ss_pred cCCc---eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHH---------HHHH
Confidence 6543 222223333567999999999999999999999999999998 88888642 2222 2233
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
+..... +..++.|+..+.+||+.||+++|.+||++.|+-+.++.+..+.
T Consensus 479 LEkgyR------------------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 479 LEKGYR------------------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred Hhcccc------------------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 333222 2334479999999999999999999999999999999886544
No 203
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.2e-34 Score=260.04 Aligned_cols=213 Identities=20% Similarity=0.282 Sum_probs=168.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||.|+||.||+|.+..++..|++|.+..... .+.+.+|+.+++.++||||+++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 4679999999999999999999998889999999875432 6789999999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence 347889999999999999 99999999999999999999999999976543221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
......++..|+|||++.+..++.++||||||+++|+|++|+.||........ . .. +.......
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~----~-~~---------~~~~~~~~ 218 (256)
T cd06612 155 --KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA----I-FM---------IPNKPPPT 218 (256)
T ss_pred --ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh----h-hh---------hccCCCCC
Confidence 12234568899999999988999999999999999999999999974322110 0 00 00000000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..........+.+++.+||+.||++|||+.+|++
T Consensus 219 ----------------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 219 ----------------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ----------------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0001123346789999999999999999999986
No 204
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.6e-34 Score=263.51 Aligned_cols=213 Identities=20% Similarity=0.287 Sum_probs=160.9
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHH-HhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKA-LKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l--------------- 134 (356)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+..|+.+ ++.++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 478999999999999999999999999999999875432 233456666664 667789999975
Q ss_pred -------------------------HHHHHHHHHHHHHHhhc-CCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 -------------------------ISIAIDVASALDYLHHH-CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~-~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
+.++.|++.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 35788999999999987 7 999999999999999999999999998755321
Q ss_pred CCCCccCCCCccccccccchhhhcC----CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLG----SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
. ......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... .... ...
T Consensus 158 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~---------~~~ 220 (283)
T cd06617 158 V-----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQL---------KQV 220 (283)
T ss_pred c-----ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHHH---------HHH
Confidence 1 1223457888999998865 45688999999999999999999998632211 1111 011
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+..... ... ....+..+.+++.+||..+|++||++.+|++
T Consensus 221 ~~~~~~-~~~-----------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 221 VEEPSP-QLP-----------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HhcCCC-CCC-----------------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 110000 000 0023346789999999999999999999987
No 205
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=267.79 Aligned_cols=210 Identities=18% Similarity=0.220 Sum_probs=170.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
-+|++.+.||+|.||.|-+|.....|+.||||.+++..- .+.-.+.+|+++|+.|+||||+.+
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 368999999999999999999988899999999975533 334467899999999999999988
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..+++||..|+.|+|.++ ++|||||.+|||+|.++++||+|||++..+..
T Consensus 133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~---- 205 (668)
T KOG0611|consen 133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD---- 205 (668)
T ss_pred EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc----
Confidence 348899999999999999 99999999999999999999999999986643
Q ss_pred CccCCCCccccccccchhhhcCCCC-CCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEV-STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
......++|++.|.+||++.+.+| ++.+|.|||||+||.|+.|..||++. +...++++.-.+
T Consensus 206 -~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~lvrQIs~G----------- 268 (668)
T KOG0611|consen 206 -KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKRLVRQISRG----------- 268 (668)
T ss_pred -ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHHHHHHhhcc-----------
Confidence 234456899999999999999887 47899999999999999999999853 333333332211
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+.. ++-+-...-||.+||..||++|.|+.+|...
T Consensus 269 -aYrE-----------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 269 -AYRE-----------------PETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred -cccC-----------------CCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1110 0111123468999999999999999998754
No 206
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.8e-35 Score=273.55 Aligned_cols=207 Identities=26% Similarity=0.257 Sum_probs=156.5
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHH-HHhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECK-ALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..+++.||+|++.... ......+..|.. +++.++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36899999999999999999999999987432 223345556655 5678999999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~----~~~~ 153 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ----SDTT 153 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC----CCCc
Confidence 347889999999999999 999999999999999999999999998743221 1122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||..|+|||++.+..++.++|||||||++|+|++|..||.... ........ ....+...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~~--------~~~~~~~~---- 216 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-----VAEMYDNI--------LHKPLVLR---- 216 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC-----HHHHHHHH--------HcCCccCC----
Confidence 34668999999999999999999999999999999999999996321 11111111 11000000
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
+.....+.+++.+|++.+|.+||++.+.++.+
T Consensus 217 ----------------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 217 ----------------PGASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred ----------------CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 01223567899999999999999986444433
No 207
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.9e-34 Score=270.73 Aligned_cols=244 Identities=20% Similarity=0.197 Sum_probs=170.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.++|.+...||+|+||.||+|++..+++.||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999998889999999986432 2234567899999999999999876
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 94 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~- 169 (342)
T cd07879 94 DFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLARHADA- 169 (342)
T ss_pred eEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCcCCCC-
Confidence 226778999999999999 99999999999999999999999999875422
Q ss_pred CCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC---chHHH
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN---RVMDI 264 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~ 264 (356)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+..... .... ...+.
T Consensus 170 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~-~~~~~~~~~~~~ 241 (342)
T cd07879 170 ------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILK-VTGVPGPEFVQK 241 (342)
T ss_pred ------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-hcCCCCHHHHHH
Confidence 1223566888999999876 46889999999999999999999999742211 01111111 1110 11111
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH--HHHhhh
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD--LQSVNN 329 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~--L~~i~~ 329 (356)
+......... ...+.................+.+++.+||+.||++||++.+++.. ++.+.+
T Consensus 242 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 242 LEDKAAKSYI---KSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred hcccchHHHH---hhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 1000000000 0000000000000011233457899999999999999999999854 555543
No 208
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.7e-35 Score=275.95 Aligned_cols=171 Identities=23% Similarity=0.275 Sum_probs=143.9
Q ss_pred HHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-------
Q 039228 65 ESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------- 134 (356)
Q Consensus 65 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------- 134 (356)
.++....++|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344556689999999999999999999999999999999986421 2233457789999999999999987
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccc
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR 185 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 185 (356)
..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 336789999999999999 999999999999999999999999999865
Q ss_pred ccCCCCCccCCCCccccccccchhhhcCCC----CCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 186 QEVSNPTQSSSNGVRRTIGYTALDYDLGSE----VSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.... ........||+.|+|||++.+.. ++.++|||||||++|||++|..||..
T Consensus 193 ~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 193 NKEG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CcCC---cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 4221 11223467899999999987543 78899999999999999999999964
No 209
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.8e-34 Score=262.93 Aligned_cols=222 Identities=23% Similarity=0.371 Sum_probs=170.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCe----EEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRA----VVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+|++.+.||+|+||.||+|.+..++. .||+|.+..... .....+.+|+.++++++||||+++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 568899999999999999999876543 689998865533 334678899999999999999875
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
+.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 457889999999999998 9999999999999999999999999998665322
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
... ......++..|+|||.+....++.++|+||||+++||+++ |..||...... .+........
T Consensus 164 ~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~----------- 228 (279)
T cd05057 164 KEY--HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEKGE----------- 228 (279)
T ss_pred cce--ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhCCC-----------
Confidence 211 1112223567999999988889999999999999999999 99998643211 1111111000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhh
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNI 330 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~ 330 (356)
.... +..+...+.+++.+||..+|+.||++.++++.|.++...
T Consensus 229 ~~~~-------------------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 229 RLPQ-------------------PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CCCC-------------------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 0000 002233567899999999999999999999999988653
No 210
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2e-34 Score=260.58 Aligned_cols=215 Identities=21% Similarity=0.278 Sum_probs=165.8
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc---------chHHHHHHHHHHhhcCCCChHHH---------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG---------ASKSFMAECKALKNICHRNLVRF--------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l--------- 134 (356)
+|.+...||.|+||.||+|.+..+++.||+|.+...... ..+.+.+|+.++++++||||+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477889999999999999999888899999988643221 12467889999999999999987
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||.++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 357889999999999998 9999999999999999999999999998664
Q ss_pred cCCCCC--ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 187 EVSNPT--QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 187 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
...... ........++..|+|||.+.+..++.++|+||||+++|+|++|+.||..... ..... .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~---------~~ 224 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQAIF---------KI 224 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HHHHH---------HH
Confidence 321110 1112234578899999999988899999999999999999999999974311 11100 00
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
... ..... +......+.+++.+||+.||.+||++.+|++
T Consensus 225 ~~~-~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 225 GEN-ASPEI------------------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred hcc-CCCcC------------------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000 00000 0123346789999999999999999999986
No 211
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.3e-34 Score=262.86 Aligned_cols=234 Identities=21% Similarity=0.255 Sum_probs=167.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 468899999999999999999998899999999864322 234568899999999999999988
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 154 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence 347789999999999999 9999999999999999999999999987653322
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHH--hCCCchHHHhh---
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM--AFPNRVMDIVN--- 266 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~--- 266 (356)
.......++..|+|||++.+ ..++.++||||||+++|||++|++||...... ......... .+........+
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccch
Confidence 11223457889999999875 34678999999999999999999998642210 111111100 01111111111
Q ss_pred ---hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 267 ---LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 267 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
........ . ...........+..+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 233 LFAGMRLPEVK-----E----IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred Hhhcccccccc-----C----cchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000 0 00000001134557889999999999999999999875
No 212
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.3e-34 Score=265.01 Aligned_cols=212 Identities=20% Similarity=0.224 Sum_probs=163.4
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+..|+.++++++|+|++++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 7778899999999999999999999999999864322 223457789999999999999876
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 347789999999999998 9999999999999999999999999987543221
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||....... ..... ..... . ......
T Consensus 157 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~-~~~~~-~----~~~~~~- 225 (285)
T cd05630 157 ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEV-ERLVK-E----VQEEYS- 225 (285)
T ss_pred ---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHH-Hhhhh-h----hhhhcC-
Confidence 1123468999999999999899999999999999999999999997432111 00000 00000 0 000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC-----hHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN-----VPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~~vl~ 322 (356)
......+.+|+..||+.||++||| +.++++
T Consensus 226 ---------------------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 226 ---------------------EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ---------------------ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 022335679999999999999999 778776
No 213
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.1e-34 Score=260.63 Aligned_cols=166 Identities=22% Similarity=0.303 Sum_probs=140.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-----ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-----QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+|+..+.||+|+||.||+|.+..++..||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47999999999999999999999899999999986432 1233568889999999999999876
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 347889999999999998 99999999999999999999999999875532
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.... ........++..|+|||++.+..++.++|+|||||++|+|++|+.||..
T Consensus 159 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 159 ICMS-GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred cccc-CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 2111 1112234578899999999988899999999999999999999999964
No 214
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-34 Score=268.51 Aligned_cols=227 Identities=19% Similarity=0.269 Sum_probs=169.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|++.+.||+|+||.||++.+..++..+|+|.+..... .....+.+|++++++++||||+++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 469999999999999999999999999999999875422 234568899999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ---------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+++.||.|||+ .+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 153 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 153 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc----
Confidence 3578899999999997 46 999999999999999999999999998654221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC-------------
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN------------- 259 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~------------- 259 (356)
......++..|+|||.+.+..++.++|+||||+++|+|++|+.||..... .............
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCccccccccCCcccccCC
Confidence 12335678899999999888899999999999999999999999864321 1111111110000
Q ss_pred --------chHHHhhhhhccccccccccccchhhhhchhhH-HHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 260 --------RVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSR-LECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 260 --------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
...+..+....... +..+ ......+.+++.+||..+|++|||+.+|+..-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPP---------------PKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCC---------------ccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 00111111110000 0000 01344678999999999999999999998763
No 215
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.5e-34 Score=262.39 Aligned_cols=237 Identities=25% Similarity=0.282 Sum_probs=165.8
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||.|++|.||+|++..+++.||||.+.... ......+.+|++++++++||||+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 5888999999999999999999889999999986442 2233578899999999999999988
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~--- 154 (284)
T cd07860 81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--- 154 (284)
T ss_pred cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc---
Confidence 346778999999999999 9999999999999999999999999987553221
Q ss_pred ccCCCCccccccccchhhhcCCC-CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-CC-chHHHhhhhh
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-PN-RVMDIVNLVL 269 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l 269 (356)
.......++..|+|||++.+.. ++.++||||||+++|+|+||+.||....... ...+...... +. .....+...
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 231 (284)
T cd07860 155 -RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSL- 231 (284)
T ss_pred -cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHH-
Confidence 1122234578899999887644 5888999999999999999999996432211 1112111111 10 000000000
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
. .+ ......................+.+++.+||+.||.+|||+.+++.
T Consensus 232 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 232 P-DY---KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred H-HH---HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0 00 0000000000000001122345679999999999999999999985
No 216
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.6e-34 Score=264.90 Aligned_cols=166 Identities=28% Similarity=0.430 Sum_probs=139.3
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++++|.+.+.||+|+||.||+|....++..||+|.+..... .....+.+|+.+++.++|+||+++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 46789999999999999999999998899999999865432 223467789999999999999876
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||+++......
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 157 (291)
T cd07870 83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-- 157 (291)
T ss_pred ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCC--
Confidence 347789999999999999 9999999999999999999999999987543211
Q ss_pred CccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
.......++..|+|||++.+. .++.++||||||+++|+|++|..||...
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 158 --QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred --CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 112234568899999998753 5788999999999999999999999743
No 217
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.6e-34 Score=270.11 Aligned_cols=242 Identities=21% Similarity=0.215 Sum_probs=167.0
Q ss_pred CCCccccceecCceEEEEEEECCC--CeEEEEEEeecc--CccchHHHHHHHHHHhhc-CCCChHHH-------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLN--RAVVAIKVLSIQ--CQGASKSFMAECKALKNI-CHRNLVRF------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l------------- 134 (356)
+|++.+.||+|+||.||+|.+..+ +..||+|.+... .....+.+.+|+.+++++ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 478899999999999999999877 889999998643 222346788899999999 59999986
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||+++....
T Consensus 81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 347789999999999999 99999999999999999999999999986543
Q ss_pred CCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-CC--chHH
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-PN--RVMD 263 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~--~~~~ 263 (356)
.............|+..|+|||++.+ ..++.++||||||+++|+|++|.+||...... ..+.......- +. ....
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 32222222344678999999998765 46889999999999999999999998643211 01111111100 00 0001
Q ss_pred HhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 264 IVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 264 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+.++.................... .......+.+++.+||+.||.+|||+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESI----FPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhh----CCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 100000000000000000000000 0112346789999999999999999999874
No 218
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.6e-34 Score=264.35 Aligned_cols=212 Identities=21% Similarity=0.218 Sum_probs=162.2
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
|+..+.||.|+||+||+|.+..+++.||+|.+.... ......+.+|+.+++.++|+||+++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 677889999999999999999999999999986432 1223457789999999999999876
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 447889999999999999 9999999999999999999999999986543211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......|+..|+|||++.+..++.++|+||||+++|+|++|..||....... ............. ....
T Consensus 157 ---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~~~~~~~~~------~~~~- 225 (285)
T cd05632 157 ---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEVDRRVLETE------EVYS- 225 (285)
T ss_pred ---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhhccc------cccC-
Confidence 1223568999999999998899999999999999999999999997432110 0011100000000 0000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC-----hHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN-----VPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~~vl~ 322 (356)
......+.+|+..||+.||++||+ +.+++.
T Consensus 226 ---------------------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 226 ---------------------AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ---------------------ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 022335678999999999999999 556555
No 219
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-34 Score=267.00 Aligned_cols=215 Identities=20% Similarity=0.213 Sum_probs=169.3
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
..+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++||||+++
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 3679999999999999999999988899999999976555556778899999999999999986
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 98 ~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~----~ 170 (297)
T cd06656 98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----S 170 (297)
T ss_pred cCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc----c
Confidence 357789999999999998 9999999999999999999999999987543221 1
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
......+++.|+|||.+.+..++.++|+|||||++|+|++|..||.......... .......+ .+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-~~~~~~~~---------~~----- 235 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIATNGTP---------EL----- 235 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-eeccCCCC---------CC-----
Confidence 1223457889999999998889999999999999999999999996422111000 00000000 00
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..+......+.+++.+||+.+|++||++.+|++
T Consensus 236 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 236 ---------------QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ---------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000123345678999999999999999999988
No 220
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.2e-34 Score=264.19 Aligned_cols=215 Identities=20% Similarity=0.234 Sum_probs=166.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.+.|++.+.||.|+||.||+|.+..++..|++|.+........+.+..|+.+++.++||||+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 4679999999999999999999999999999999987666666788899999999999999986
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--- 164 (292)
T cd06644 91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--- 164 (292)
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc---
Confidence 447889999999999998 9999999999999999999999999986432211
Q ss_pred ccCCCCccccccccchhhhc-----CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 193 QSSSNGVRRTIGYTALDYDL-----GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.......++..|+|||++. ...++.++|+|||||++|+|++|..||..... ........... .+
T Consensus 165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~-----~~ 233 (292)
T cd06644 165 -QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSE-----PP 233 (292)
T ss_pred -cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHHHHhcCC-----Cc
Confidence 1122355788999999884 34467899999999999999999999864211 11110000000 00
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+. ........+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 234 TLS--------------------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cCC--------------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 00123345788999999999999999999975
No 221
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.7e-34 Score=260.17 Aligned_cols=217 Identities=23% Similarity=0.369 Sum_probs=168.0
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
..++|.+.+.||.|+||.||+|.+..+ ..||||.+.... ...+.+.+|+.++++++|+||+++
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~-~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGT-TKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCC-ceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 356799999999999999999998654 789999987443 334678999999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDE- 157 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchh-
Confidence 347789999999999999 9999999999999999999999999987654311
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.........+..|+|||.+.+..++.++|+||||+++|+|++ |+.||...... ...... ....
T Consensus 158 --~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~------------~~~~ 221 (261)
T cd05034 158 --YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQV------------ERGY 221 (261)
T ss_pred --hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH------------HcCC
Confidence 111112334568999999998889999999999999999998 99998642211 111100 0000
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
.... +...+..+.+++.+||..+|++||+++++++.|+.
T Consensus 222 ~~~~------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 RMPR------------------PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCC------------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0000 01223467899999999999999999999999875
No 222
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-34 Score=267.31 Aligned_cols=224 Identities=22% Similarity=0.298 Sum_probs=168.7
Q ss_pred cCCCCccccceecCceEEEEEEEC-------CCCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH-------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFD-------LNRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l------- 134 (356)
.++|.+.+.||+|+||.||+|... .....||+|.+.... ......+..|+.+++.+ +||||+++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 457889999999999999999863 234679999987432 23345688999999999 59999876
Q ss_pred ----------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe
Q 039228 135 ----------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL 168 (356)
Q Consensus 135 ----------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll 168 (356)
+.++.|++.||.|||+++ ++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEE
Confidence 124679999999999999 9999999999999
Q ss_pred CCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCc
Q 039228 169 DNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDL 247 (356)
Q Consensus 169 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~ 247 (356)
+.++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|+|++ |..||.....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--- 242 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYY--KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--- 242 (314)
T ss_pred cCCCcEEEccccccccccccccc--cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---
Confidence 99999999999999765322111 11111233467999999988889999999999999999999 8899863211
Q ss_pred cHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 248 NLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
...... +....... .+..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 243 --~~~~~~---------~~~~~~~~------------------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 243 --EELFKL---------LREGHRMD------------------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred --HHHHHH---------HHcCCCCC------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 111111 00000000 0013344678999999999999999999999999999
Q ss_pred hhhh
Q 039228 328 NNIL 331 (356)
Q Consensus 328 ~~~~ 331 (356)
....
T Consensus 294 ~~~~ 297 (314)
T cd05099 294 LAAV 297 (314)
T ss_pred HHHh
Confidence 7654
No 223
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9.6e-35 Score=270.37 Aligned_cols=201 Identities=25% Similarity=0.249 Sum_probs=153.5
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHH-HHhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECK-ALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999999999999999987432 122344555654 6788999999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----~~~~ 153 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP----EETT 153 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC----CCcc
Confidence 347789999999999999 999999999999999999999999998743211 1122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....||+.|+|||++.+..++.++|||||||++|||++|..||.... ....... +....+. .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~--------i~~~~~~--~--- 215 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDN--------ILHKPLQ--L--- 215 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHH--------HhcCCCC--C---
Confidence 34568999999999998899999999999999999999999996421 1111111 1110000 0
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP 318 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 318 (356)
+......+.+++.+||+.||.+||++.
T Consensus 216 ---------------~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 ---------------PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ---------------CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 002233568999999999999999864
No 224
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-34 Score=294.82 Aligned_cols=217 Identities=20% Similarity=0.266 Sum_probs=165.8
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
...++|.+++.||.|+||.||+|.+..++..||+|++.... ......+..|+.+++.++|||||++
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34678999999999999999999999999999999987432 2334678899999999999999986
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCC----CcEEecCCCCCCeEeCC---------
Q 039228 135 -------------------------------ISIAIDVASALDYLHHHCQ----ELILHCDPKPSNVLLDN--------- 170 (356)
Q Consensus 135 -------------------------------~~i~~~i~~aL~~LH~~~~----~~iiH~Dlkp~NIll~~--------- 170 (356)
+.|+.||+.||.|||+.+. .+||||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 3478899999999998531 23999999999999964
Q ss_pred --------CCceEEcccccccccccCCCCCccCCCCccccccccchhhhcC--CCCCCccchHhHHHHHHHHHcCCCCCC
Q 039228 171 --------DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG--SEVSTNGDAYNYGILLLEMVTRRKPID 240 (356)
Q Consensus 171 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlG~~l~elltg~~Pf~ 240 (356)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s-----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES-----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc-----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 3458999999997653221 1234568999999999864 458899999999999999999999996
Q ss_pred ccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHH
Q 039228 241 FMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNA 320 (356)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~v 320 (356)
... .+..+....... +.+.. ......+.+|+..||..+|.+||++.++
T Consensus 245 ~~~----~~~qli~~lk~~-------p~lpi---------------------~~~S~eL~dLI~~~L~~dPeeRPSa~Ql 292 (1021)
T PTZ00266 245 KAN----NFSQLISELKRG-------PDLPI---------------------KGKSKELNILIKNLLNLSAKERPSALQC 292 (1021)
T ss_pred cCC----cHHHHHHHHhcC-------CCCCc---------------------CCCCHHHHHHHHHHhcCChhHCcCHHHH
Confidence 321 111111111000 00000 0123357899999999999999999999
Q ss_pred HH
Q 039228 321 VH 322 (356)
Q Consensus 321 l~ 322 (356)
+.
T Consensus 293 L~ 294 (1021)
T PTZ00266 293 LG 294 (1021)
T ss_pred hc
Confidence 84
No 225
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.1e-34 Score=258.10 Aligned_cols=210 Identities=23% Similarity=0.329 Sum_probs=161.8
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
+.||.|+||.||+|.+.. ++.||+|.+...... ....+.+|+.++++++|+||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 368999999999999987 899999998754333 45678999999999999999875
Q ss_pred ----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCC
Q 039228 135 ----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198 (356)
Q Consensus 135 ----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 198 (356)
+.++.+++.||.|||+++ ++||||+|+||+++.++.++|+|||++........ ......
T Consensus 80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~ 154 (251)
T cd05041 80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY--TVSDGL 154 (251)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcc--eecccc
Confidence 447778999999999999 99999999999999999999999999975432111 111112
Q ss_pred ccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 199 ~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...+..|+|||.+.+..++.++|+||||+++|+|++ |..||...... ..... +........
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~------------~~~~~~~~~---- 216 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRER------------IESGYRMPA---- 216 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHH------------HhcCCCCCC----
Confidence 233567999999988889999999999999999999 88888643211 11111 111000000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
+...+..+.+++.+||..+|++|||+.+|++.|+
T Consensus 217 --------------~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 217 --------------PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --------------CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0123446889999999999999999999999986
No 226
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.5e-34 Score=259.58 Aligned_cols=216 Identities=20% Similarity=0.280 Sum_probs=168.9
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|+..+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.++++++||||+++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 468889999999999999999998899999999876532 344678899999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 3477899999999999 88 99999999999999999999999999875532211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
....++..|+|||++.+..++.++||||||+++|+|++|..||............. +...+..
T Consensus 157 -----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~------------~~~~~~~ 219 (265)
T cd06605 157 -----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFEL------------LQYIVNE 219 (265)
T ss_pred -----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHH------------HHHHhcC
Confidence 11567889999999999899999999999999999999999997543211111111 1111111
Q ss_pred ccccccccccchhhhhchhhHH-HHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRL-ECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.... ... .....+.+++.+||..||++|||+.+++..
T Consensus 220 ~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 220 PPPR---------------LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCC---------------CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0000 000 134467899999999999999999999753
No 227
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.3e-34 Score=259.51 Aligned_cols=217 Identities=22% Similarity=0.380 Sum_probs=167.9
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
..++|++.+.||+|+||.||+|.+.. +..+|+|.+... ......+.+|+.+++.++|+||+++
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecC-CccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEe
Confidence 35679999999999999999998764 467999988643 2234678899999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 157 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 157 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence 347789999999999998 99999999999999999999999999976533211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.......++..|+|||++.+..++.++|+||||+++|++++ |..||...... .........+..
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~----------- 222 (260)
T cd05073 158 --TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRM----------- 222 (260)
T ss_pred --ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCCC-----------
Confidence 11222345677999999998889999999999999999999 99998643211 111111110000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
. .....+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 223 -~------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 -P------------------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -C------------------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0 001233467899999999999999999999999974
No 228
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.7e-35 Score=286.66 Aligned_cols=242 Identities=16% Similarity=0.160 Sum_probs=161.2
Q ss_pred hcCCCCccccceecCceEEEEEEECCCC-eEEEEEEe--------------e---ccCccchHHHHHHHHHHhhcCCCCh
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNR-AVVAIKVL--------------S---IQCQGASKSFMAECKALKNICHRNL 131 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~--------------~---~~~~~~~~~~~~E~~~l~~l~h~ni 131 (356)
..++|++++.||+|+||.||+|..+... ..+++|.+ . .........+.+|+.+|++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3568999999999999999998764321 12222211 0 0112234567899999999999999
Q ss_pred HHH-----------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC
Q 039228 132 VRF-----------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN 170 (356)
Q Consensus 132 v~l-----------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~ 170 (356)
+++ ..++.|++.||.|||+++ ||||||||+|||++.
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~ 302 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNC 302 (501)
T ss_pred CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECC
Confidence 986 237789999999999999 999999999999999
Q ss_pred CCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCC-CCccccC-Ccc
Q 039228 171 DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP-IDFMFEG-DLN 248 (356)
Q Consensus 171 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~P-f~~~~~~-~~~ 248 (356)
++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..+ +...... ...
T Consensus 303 ~~~vkL~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKERE---AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCEEEEeCCCceecCcccc---cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 99999999999986543221 222346789999999999999999999999999999999998754 4322111 111
Q ss_pred HHHHHHH------hCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 249 LHNFARM------AFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 249 ~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+...... .++.....+.+.................+... .....+.+++.+||+.||.+|||+.|+++
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNL------GLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhc------CCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111111 12221111111111101100000111111110 12234677899999999999999999987
Q ss_pred H
Q 039228 323 D 323 (356)
Q Consensus 323 ~ 323 (356)
.
T Consensus 454 h 454 (501)
T PHA03210 454 L 454 (501)
T ss_pred C
Confidence 4
No 229
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-34 Score=269.12 Aligned_cols=223 Identities=22% Similarity=0.307 Sum_probs=168.5
Q ss_pred cCCCCccccceecCceEEEEEEECC-------CCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH-------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL-------NRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l------- 134 (356)
..+|++.+.||+|+||.||+|.+.. ....||+|.+.... ....+.+.+|+.+++++ +||||+++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 3468999999999999999998642 22478999887432 23356788999999999 79999975
Q ss_pred ----------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe
Q 039228 135 ----------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL 168 (356)
Q Consensus 135 ----------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll 168 (356)
+.++.|++.||.|||+.+ ++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEE
Confidence 125679999999999999 9999999999999
Q ss_pred CCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCc
Q 039228 169 DNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDL 247 (356)
Q Consensus 169 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~ 247 (356)
+.++.+||+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---- 241 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDY--YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP---- 241 (334)
T ss_pred cCCCcEEECCcccceecccccc--cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC----
Confidence 9999999999999976543211 111122334567999999999899999999999999999998 889886421
Q ss_pred cHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 248 NLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
........ ........ ...+...+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 242 -~~~~~~~~---------~~~~~~~~------------------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 242 -VEELFKLL---------KEGHRMDK------------------PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred -HHHHHHHH---------HcCCCCCC------------------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 11111110 00000000 012344678999999999999999999999999998
Q ss_pred hhh
Q 039228 328 NNI 330 (356)
Q Consensus 328 ~~~ 330 (356)
...
T Consensus 294 ~~~ 296 (334)
T cd05100 294 LTV 296 (334)
T ss_pred hhh
Confidence 743
No 230
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-34 Score=267.64 Aligned_cols=224 Identities=22% Similarity=0.298 Sum_probs=168.8
Q ss_pred cCCCCccccceecCceEEEEEEECC-------CCeEEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH-------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL-------NRAVVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l------- 134 (356)
.++|.+.+.||+|+||.||+|.+.. +...+|+|.+.... ......+..|+.+++.+ +||||+++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3579999999999999999998643 23579999987542 23345688899999999 79999876
Q ss_pred ----------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe
Q 039228 135 ----------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL 168 (356)
Q Consensus 135 ----------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll 168 (356)
+.++.|++.||+|||+.+ ++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 135789999999999999 9999999999999
Q ss_pred CCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCc
Q 039228 169 DNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDL 247 (356)
Q Consensus 169 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~ 247 (356)
+.++.++|+|||++......... .......++..|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~---- 247 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---- 247 (307)
T ss_pred cCCCcEEECCCcccccccccchh--hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC----
Confidence 99999999999998754321110 11112234568999999998889999999999999999998 888885321
Q ss_pred cHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 248 NLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
....... +....... .+..+...+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 248 -~~~~~~~---------~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 248 -VEELFKL---------LKEGHRMD------------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred -HHHHHHH---------HHcCCCCC------------------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 1111111 11000000 0013344678899999999999999999999999998
Q ss_pred hhhh
Q 039228 328 NNIL 331 (356)
Q Consensus 328 ~~~~ 331 (356)
....
T Consensus 300 ~~~~ 303 (307)
T cd05098 300 LALT 303 (307)
T ss_pred HHHh
Confidence 7654
No 231
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.3e-34 Score=256.87 Aligned_cols=212 Identities=20% Similarity=0.272 Sum_probs=167.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||.|++|.||++.+..+++.||+|.+.... ....+.+.+|+.++++++|+|++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4889999999999999999999889999999986542 2334568889999999999999976
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 357789999999999999 9999999999999999999999999997653322
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.......+++.|+|||++.+..++.++|+||||+++|+|++|+.||.... ..........+. +
T Consensus 157 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~~--------~- 219 (257)
T cd08223 157 ---DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSLVYRIIEGK--------L- 219 (257)
T ss_pred ---CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhcC--------C-
Confidence 12234567889999999999899999999999999999999999986321 111111110000 0
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... .......+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 PPM------------------PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCC------------------ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 01233467899999999999999999999863
No 232
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.6e-34 Score=263.03 Aligned_cols=219 Identities=21% Similarity=0.305 Sum_probs=167.1
Q ss_pred cCCCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------- 134 (356)
.++|++.+.||+|+||.||+|.+.. ++..||+|++..... ...+.+.+|+.++++++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 4679999999999999999998743 568999999875432 334568899999999999999875
Q ss_pred -------------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCC
Q 039228 135 -------------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSN 165 (356)
Q Consensus 135 -------------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~N 165 (356)
+.++.+++.||.|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 147889999999999999 9999999999
Q ss_pred eEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCcccc
Q 039228 166 VLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFE 244 (356)
Q Consensus 166 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~ 244 (356)
|+++.++.++|+|||++........ .........+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY--YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred eEecCCCceEECccccceecccCcc--ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999875432211 111122234567999999998899999999999999999998 8888853221
Q ss_pred CCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 245 GDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.+......... .... ...++..+.+++.+||+.+|++|||+.||++.|
T Consensus 239 -----~~~~~~~~~~~--------~~~~-------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l 286 (288)
T cd05050 239 -----EEVIYYVRDGN--------VLSC-------------------PDNCPLELYNLMRLCWSKLPSDRPSFASINRIL 286 (288)
T ss_pred -----HHHHHHHhcCC--------CCCC-------------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 11111110000 0000 012344678999999999999999999999998
Q ss_pred HH
Q 039228 325 QS 326 (356)
Q Consensus 325 ~~ 326 (356)
+.
T Consensus 287 ~~ 288 (288)
T cd05050 287 QR 288 (288)
T ss_pred hC
Confidence 63
No 233
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3e-35 Score=273.42 Aligned_cols=202 Identities=22% Similarity=0.220 Sum_probs=155.9
Q ss_pred ccceecCceEEEEEEE---CCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH------------------
Q 039228 78 NLIGVGSFDAVYQGVF---DLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF------------------ 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l------------------ 134 (356)
+.||+|+||.||++.. ..+++.||+|++..... .....+..|+.++++++||||+++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999886 35689999999975322 223457789999999999999987
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ..
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----~~ 154 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE----KK 154 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC----Cc
Confidence 447889999999999999 9999999999999999999999999987543221 12
Q ss_pred CCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ...... +...... .
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~--------i~~~~~~--~-- 217 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMTM--------ILKAKLG--M-- 217 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHHH--------HHcCCCC--C--
Confidence 2345689999999999988899999999999999999999999964211 111111 0000000 0
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPN 319 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~ 319 (356)
+......+.+++.+||+.||++||++.+
T Consensus 218 ----------------p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 ----------------PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred ----------------CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 0022335678999999999999999655
No 234
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-34 Score=264.08 Aligned_cols=224 Identities=20% Similarity=0.253 Sum_probs=170.7
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56899999999999999999999889999999986543 3345678899999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ---------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---- 157 (284)
T cd06620 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---- 157 (284)
T ss_pred CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh----
Confidence 3477889999999997 56 999999999999999999999999998644221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
......++..|+|||++.+..++.++|+|||||++|+|++|..||......... ...+..+.+.+.......
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 229 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG------QDDPMGILDLLQQIVQEP 229 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh------hhhhhHHHHHHHHHhhcc
Confidence 112356889999999998888999999999999999999999999754322110 000011112222211111
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
... . .....+..+.+++.+||+.||++|||+.+|+++.
T Consensus 230 ~~~----~----------~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 230 PPR----L----------PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred CCC----C----------CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000 0 0002445678999999999999999999999874
No 235
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4e-34 Score=256.15 Aligned_cols=209 Identities=23% Similarity=0.332 Sum_probs=159.8
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
++||+|+||.||+|... ++..||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 36899999999999875 568999999875432 233468899999999999999986
Q ss_pred ----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCC
Q 039228 135 ----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNG 198 (356)
Q Consensus 135 ----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 198 (356)
+.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........ .....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~---~~~~~ 153 (250)
T cd05085 80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY---SSSGL 153 (250)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc---ccCCC
Confidence 457789999999999999 99999999999999999999999999875432211 11112
Q ss_pred ccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 199 VRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 199 ~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
..++..|+|||++.+..++.++||||||+++|++++ |..||...... ........ ......
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~~------------~~~~~~---- 215 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVEK------------GYRMSC---- 215 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHHc------------CCCCCC----
Confidence 233567999999998889999999999999999998 99998643211 11111100 000000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
...++..+.+++.+||+.+|++||++.++++.|.
T Consensus 216 --------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 216 --------------PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred --------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0123446789999999999999999999999875
No 236
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.6e-34 Score=264.95 Aligned_cols=217 Identities=23% Similarity=0.240 Sum_probs=166.6
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc---chHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG---ASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|....+++.||+|.+...... ..+.+..|+.+++.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 3688999999999999999999988999999999754322 34568899999999999999998
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 336789999999999999 9999999999999999999999999987543221
Q ss_pred CCC-------------------------ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCcccc
Q 039228 190 NPT-------------------------QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFE 244 (356)
Q Consensus 190 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~ 244 (356)
... ........|+..|+|||++.+..++.++||||||+++|+|++|..||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 100 1112235678899999999988899999999999999999999999964321
Q ss_pred CCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC----hHHH
Q 039228 245 GDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN----VPNA 320 (356)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs----~~~v 320 (356)
.. .+ ..+......-. ........+.+++.+||..||++||+ +.++
T Consensus 238 ~~-~~------------~~~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~l 286 (316)
T cd05574 238 DE-TF------------SNILKKEVTFP------------------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEI 286 (316)
T ss_pred HH-HH------------HHHhcCCccCC------------------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHH
Confidence 10 11 11111100000 00013446789999999999999999 5555
Q ss_pred HH
Q 039228 321 VH 322 (356)
Q Consensus 321 l~ 322 (356)
+.
T Consensus 287 l~ 288 (316)
T cd05574 287 KQ 288 (316)
T ss_pred Hc
Confidence 54
No 237
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.6e-34 Score=262.36 Aligned_cols=213 Identities=18% Similarity=0.210 Sum_probs=165.9
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
|.....||.|+||.||++....++..||||.+........+.+.+|+.+++.++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 4445679999999999999988899999999876555556678899999999999999997
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.+|+.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ....
T Consensus 104 ~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----~~~~ 176 (292)
T cd06658 104 GALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV----PKRK 176 (292)
T ss_pred CcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc----ccCc
Confidence 347889999999999999 9999999999999999999999999987543221 1123
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...++..|+|||++.+..++.++|+||||+++|||++|+.||..... .......... +.+.+...
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~~--------~~~~~~~~----- 241 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--LQAMRRIRDN--------LPPRVKDS----- 241 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhc--------CCCccccc-----
Confidence 35678899999999888899999999999999999999999863211 0100000000 01111000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
......+.+++..||..||.+|||+.++++.
T Consensus 242 ---------------~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 242 ---------------HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ---------------cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0223356789999999999999999999974
No 238
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=6.7e-34 Score=263.45 Aligned_cols=168 Identities=27% Similarity=0.356 Sum_probs=140.8
Q ss_pred CCCccccceecCceEEEEEEECC--CCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDL--NRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 47888999999999999999988 78999999997632 3445678889999999999999987
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC----CCceEEcccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN----DLFAHIGDFE 180 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~----~~~~kl~Dfg 180 (356)
..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 247789999999999999 999999999999999 9999999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCcccc
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFE 244 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~ 244 (356)
++......... ........++..|+|||++.+. .++.++||||||+++|+|++|++||.....
T Consensus 158 ~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 158 LARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred cccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 99865433221 1223345678899999988764 578999999999999999999999975433
No 239
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.7e-34 Score=257.43 Aligned_cols=213 Identities=22% Similarity=0.304 Sum_probs=163.6
Q ss_pred ccceecCceEEEEEEECC-CC--eEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDL-NR--AVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
+.||+|++|.||+|.+.. ++ ..||+|.+..... ...+.+.+|+.++++++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG 80 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence 368999999999999865 22 3699999976555 556789999999999999999976
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
+.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++........ ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~ 156 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH-YVM 156 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc-eec
Confidence 346779999999999999 999999999999999999999999999876442221 111
Q ss_pred CCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
.....++..|+|||++.+..++.++|||||||++|+|++ |..||....... ........ . ..+ .
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~--~-------~~~-~--- 221 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKE--G-------ERL-E--- 221 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhc--C-------CcC-C---
Confidence 223456788999999998889999999999999999999 999986432111 11110000 0 000 0
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.....+..+.+++.+||+.+|++||++.+|++.|.
T Consensus 222 ----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 ----------------RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----------------CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00123446789999999999999999999999875
No 240
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=7.9e-35 Score=275.23 Aligned_cols=167 Identities=22% Similarity=0.254 Sum_probs=141.2
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|....+++.||+|++.... ......+..|+.++..++||||+++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46899999999999999999999999999999997432 2334567889999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++..+......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 347889999999999999 999999999999999999999999998754321100
Q ss_pred -------------------------------CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCC
Q 039228 192 -------------------------------TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240 (356)
Q Consensus 192 -------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~ 240 (356)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 0001123578999999999999999999999999999999999999996
Q ss_pred c
Q 039228 241 F 241 (356)
Q Consensus 241 ~ 241 (356)
.
T Consensus 238 ~ 238 (360)
T cd05627 238 S 238 (360)
T ss_pred C
Confidence 4
No 241
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-33 Score=255.84 Aligned_cols=219 Identities=19% Similarity=0.232 Sum_probs=167.3
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc------cchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ------GASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
+|+..+.||+|++|.||+|....+++.||+|.+..... ...+.+.+|+.++++++|+||+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 47888999999999999999998999999999874321 134678899999999999999998
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC-ceEEcccccccccccC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL-FAHIGDFELARFRQEV 188 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 188 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++ .++|+|||.+......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 347789999999999999 99999999999998776 5999999999766443
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
............++..|+|||.+.+..++.++|+||+|+++|+|++|..||...... ........ .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~--------~~~~~ 227 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFK--------IASAT 227 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHH--------HhccC
Confidence 221122223456788999999998888999999999999999999999998632211 11111000 00000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.... .+......+.+++.+||..+|++||++.+++.
T Consensus 228 ~~~~------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 228 TAPS------------------IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCC------------------CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0000 11134456788999999999999999999985
No 242
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.6e-34 Score=259.37 Aligned_cols=221 Identities=20% Similarity=0.194 Sum_probs=168.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|...+.||.|++|.||+|.+..+++.||+|.+..... .....+.+|++++++++||||+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 468889999999999999999998999999999875433 345678999999999999999886
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 247788999999999999 99999999999999999999999999865432
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.. .....++..|++||.+.+..++.++||||||+++|+|++|..||...........+.......... +
T Consensus 158 ~~------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~ 226 (287)
T cd06621 158 SL------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN-----P 226 (287)
T ss_pred cc------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc-----h
Confidence 11 123456788999999998899999999999999999999999997542211111111111000000 0
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+..... ........+.+++.+||+.+|.+|||+.||++
T Consensus 227 ~~~~~~~----------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 227 ELKDEPG----------------NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hhccCCC----------------CCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0000000 00022346789999999999999999999987
No 243
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.1e-34 Score=259.43 Aligned_cols=211 Identities=23% Similarity=0.328 Sum_probs=159.0
Q ss_pred ccceecCceEEEEEEECCCCe--EEEEEEeeccC-ccchHHHHHHHHHHhhc-CCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRA--VVAIKVLSIQC-QGASKSFMAECKALKNI-CHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+..++. .+++|.+.... ....+.+.+|+.++.++ +||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999987764 46888876432 33446788999999999 79999865
Q ss_pred ----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccc
Q 039228 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180 (356)
Q Consensus 135 ----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 180 (356)
..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 236678999999999998 9999999999999999999999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCC
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPN 259 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 259 (356)
++...... ........+..|+|||++.+..++.++||||||+++|||++ |..||..... ......
T Consensus 158 l~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~~~~~~---- 223 (270)
T cd05047 158 LSRGQEVY-----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEK---- 223 (270)
T ss_pred Cccccchh-----hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-----HHHHHH----
Confidence 98532211 11111223567999999988889999999999999999997 9999864221 111111
Q ss_pred chHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 260 RVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 260 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
+........ ...+...+.+++.+||+.+|.+|||+.+++..|+.+.
T Consensus 224 -----~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 -----LPQGYRLEK------------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -----HhCCCCCCC------------------CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 100000000 0123345789999999999999999999999998875
No 244
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.7e-34 Score=261.56 Aligned_cols=240 Identities=19% Similarity=0.260 Sum_probs=170.8
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|+++++.++|+||+++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36899999999999999999999999999999986432 3334678999999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 347789999999999999 99999999999999999999999999976543321
Q ss_pred ccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHh--CCCchHHHh--hh
Q 039228 193 QSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMA--FPNRVMDIV--NL 267 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~ 267 (356)
.......++..|+|||++.+. .++.++|+||||+++|+|++|..||......+ .+....... .+....... +.
T Consensus 156 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 156 -SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred -ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHhhhcccCc
Confidence 122335678889999999887 78999999999999999999999996432111 111111100 000000000 00
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
........ ............ +..+...+.+++.+||..+|++||++++|++
T Consensus 234 ~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFP-EPSQPESLERRY---PGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccccC-CCCCcHHHHHhc---CCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000 000000000000 0123567899999999999999999999875
No 245
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.7e-34 Score=262.30 Aligned_cols=165 Identities=29% Similarity=0.423 Sum_probs=137.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
.++|++.+.||.|++|.||+|....+++.||+|.+..... .....+.+|+.+++.++|+||+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 4679999999999999999999998899999999875432 223456789999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~--- 157 (291)
T cd07844 84 YLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS--- 157 (291)
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC---
Confidence 346779999999999999 9999999999999999999999999987542211
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
.......++..|+|||++.+ ..++.++||||||+++|+|++|+.||...
T Consensus 158 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 158 -KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred -ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11122345788999999875 45788999999999999999999999643
No 246
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.1e-34 Score=263.61 Aligned_cols=217 Identities=20% Similarity=0.259 Sum_probs=164.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcC-CCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNIC-HRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l--------------- 134 (356)
++|...+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.++.++. |+||+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 35677889999999999999999999999999987543 234457889999999996 9999985
Q ss_pred --------------------------HHHHHHHHHHHHHHhhc-CCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 --------------------------ISIAIDVASALDYLHHH-CQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~-~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.+++.||+|||+. + ++||||||+||+++.++.++|+|||++.....
T Consensus 84 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 23677899999999974 7 99999999999999999999999999975532
Q ss_pred CCCCCccCCCCccccccccchhhhcCC---CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGS---EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
.. ......++..|+|||++.+. .++.++|||||||++|+|++|+.||.... .............
T Consensus 161 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~---- 227 (288)
T cd06616 161 SI-----AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGD---- 227 (288)
T ss_pred CC-----ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCC----
Confidence 21 11223578889999998766 68899999999999999999999986422 1111111110000
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+.+.... .......+.+++.+||+.+|++|||+.+|+..
T Consensus 228 -~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 -PPILSNSE------------------EREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CCcCCCcC------------------CCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00010000 01344568899999999999999999999874
No 247
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.1e-34 Score=267.31 Aligned_cols=246 Identities=22% Similarity=0.209 Sum_probs=172.5
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.++|.+.+.||+|+||.||+|++..++..||||.+... .......+..|+.+++.++|+||+++
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45799999999999999999999999999999998643 22334567889999999999999876
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 84 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 336789999999999999 99999999999999999999999999975532
Q ss_pred CCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC----CCchH
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF----PNRVM 262 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~----~~~~~ 262 (356)
.. .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... ........... +....
T Consensus 161 ~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 161 KG----DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY--VHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred Cc----ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCChHHhh
Confidence 21 11223457889999998865 4688999999999999999999999964321 11111111110 00000
Q ss_pred HHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH--HHHhhh
Q 039228 263 DIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD--LQSVNN 329 (356)
Q Consensus 263 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~--L~~i~~ 329 (356)
.+.+.......... .. ............+...+.+++.+||+.+|++|||+.++++. +..+..
T Consensus 235 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 235 FIRNEKARRYIRSL-PY---TPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred hcCchhhhHHHHhc-Cc---ccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 00000000000000 00 00000000011345567899999999999999999999987 655543
No 248
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.5e-34 Score=266.92 Aligned_cols=206 Identities=22% Similarity=0.241 Sum_probs=158.2
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCC-CChHHH--------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICH-RNLVRF-------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l-------------- 134 (356)
+|...+.||+|+||.||+|.+..+++.||+|++.... ....+.+..|..++..+.| ++|+++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999999999999999997532 2334567788999988875 566655
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-- 155 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC--
Confidence 457889999999999999 9999999999999999999999999987432211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||..... ...... +.....
T Consensus 156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~~--------i~~~~~-- 218 (323)
T cd05615 156 --VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-----DELFQS--------IMEHNV-- 218 (323)
T ss_pred --ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHH--------HHhCCC--
Confidence 122335689999999999998999999999999999999999999974321 111111 110000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP 318 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 318 (356)
... ......+.+++.+||+.+|.+|++..
T Consensus 219 ~~p------------------~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 219 SYP------------------KSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CCC------------------ccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 000 02233567899999999999999853
No 249
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8e-34 Score=259.48 Aligned_cols=214 Identities=20% Similarity=0.251 Sum_probs=163.7
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|++.+.||+|+||.||+|.+..++..||+|.+.... ......+.+|+.++++++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36889999999999999999999889999999987542 2334678899999999999999988
Q ss_pred ------------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 ------------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.+++.||.|||+ .+ |+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 3367789999999997 47 999999999999999999999999998754321
Q ss_pred CCCccCCCCccccccccchhhhcCCC------CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHH
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSE------VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMD 263 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 263 (356)
......++..|+|||.+.+.. ++.++|+|||||++|+|++|..||...... ...... ..
T Consensus 157 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~--------~~ 221 (286)
T cd06622 157 -----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--NIFAQL--------SA 221 (286)
T ss_pred -----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--hHHHHH--------HH
Confidence 122345678899999985543 478999999999999999999999642111 110000 01
Q ss_pred HhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 264 IVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 264 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+.+. ... .....+...+.+++.+||+.+|++||++.+++..
T Consensus 222 ~~~~----~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 222 IVDG----DPP---------------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred Hhhc----CCC---------------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1110 000 0011344567899999999999999999999873
No 250
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-34 Score=259.49 Aligned_cols=218 Identities=23% Similarity=0.255 Sum_probs=171.2
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc---chHHHHHHHHHHhhcCCCChHHH------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG---ASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
..++|++++.||.|.-|+||+++...++..+|+|++.+.... ...+...|..||+.++||.++++
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence 345789999999999999999999999999999999865433 34567789999999999999998
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.+++.||+|||..| ||+|||||+||||.++|++.|+||.++.....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 237788999999999999 99999999999999999999999988743210
Q ss_pred ---------------------------------C-C------------------CCCccCCCCccccccccchhhhcCCC
Q 039228 188 ---------------------------------V-S------------------NPTQSSSNGVRRTIGYTALDYDLGSE 215 (356)
Q Consensus 188 ---------------------------------~-~------------------~~~~~~~~~~~gt~~y~aPE~~~~~~ 215 (356)
. . .+.......++||..|.|||++.|..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 01112335678999999999999999
Q ss_pred CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHH
Q 039228 216 VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLEC 295 (356)
Q Consensus 216 ~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (356)
.+.++|+|+|||++|||+.|..||.+..... .+..++...+.-.. ..+.
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-------------Tl~NIv~~~l~Fp~------------------~~~v 360 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-------------TLRNIVGQPLKFPE------------------EPEV 360 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchh-------------hHHHHhcCCCcCCC------------------CCcc
Confidence 9999999999999999999999998643221 22333333221000 0133
Q ss_pred HHHHHHHHHhhcCCCcCCCCC----hHHHH
Q 039228 296 LIFMVRIGAACSMGSSQDRMN----VPNAV 321 (356)
Q Consensus 296 ~~~l~~l~~~Cl~~dP~~RPs----~~~vl 321 (356)
.-.+.+||.+.|..||.+|-. +.||-
T Consensus 361 s~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 361 SSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred hhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 446789999999999999998 66554
No 251
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-34 Score=259.46 Aligned_cols=209 Identities=25% Similarity=0.414 Sum_probs=163.7
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
++|++.+.||+|+||.||++.. +++.||+|.+.... ....+.+|+.++++++|||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCC
Confidence 5689999999999999999975 46889999986432 34678899999999999999986
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
+.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC----
Confidence 447889999999999998 9999999999999999999999999987543211
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
.....+..|+|||++.+..++.++|+||||+++|+|++ |..||.... ...... .+.......
T Consensus 155 ---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~---------~~~~~~~~~ 217 (254)
T cd05083 155 ---DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----LKEVKE---------CVEKGYRME 217 (254)
T ss_pred ---CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----HHHHHH---------HHhCCCCCC
Confidence 12233567999999988899999999999999999997 999986422 111111 111110000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
. ...++..+.+++.+||+.+|+.||++++|++.|+.
T Consensus 218 ~------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 P------------------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred C------------------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 01334567899999999999999999999998863
No 252
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=7e-34 Score=255.37 Aligned_cols=211 Identities=25% Similarity=0.380 Sum_probs=165.4
Q ss_pred ccceecCceEEEEEEECCC---CeEEEEEEeeccCccc-hHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLN---RAVVAIKVLSIQCQGA-SKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
+.||+|+||.||+|.+... +..|++|.+....... .+.+..|+..++.++|+||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 4689999999999999865 8899999997554333 5788899999999999999986
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 246788999999999999 99999999999999999999999999986643
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
... ........++..|+|||.+....++.++||||||+++|+|++ |..||..... ...... +.+
T Consensus 158 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~--------~~~ 222 (262)
T cd00192 158 DDY--YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-----EEVLEY--------LRK 222 (262)
T ss_pred ccc--cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH--------HHc
Confidence 321 122334556888999999988889999999999999999999 6999875311 111111 000
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.... .....++..+.+++.+||+.+|.+|||+.++++.|+
T Consensus 223 ~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 GYRL-------------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCCC-------------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0000 001133456889999999999999999999999873
No 253
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.4e-34 Score=257.92 Aligned_cols=221 Identities=22% Similarity=0.290 Sum_probs=170.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|++.+.||.|+||.||+|....++..+|+|++.... ....+.+.+|+.+++.++|+||+++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47999999999999999999998888999999986443 2345778999999999999999876
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 346789999999999999 99999999999999999999999999976654332
Q ss_pred CCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
..........++..|++||++... .++.++|+||||+++|+|++|+.||....... .+....... +. .+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~-~~--------~~ 227 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQND-PP--------SL 227 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCC-CC--------Cc
Confidence 211223445678899999998776 78899999999999999999999996432211 111111100 00 00
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.... .....+..+.+++.+||+.||++||++.+|+.
T Consensus 228 ~~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 228 ETGA-----------------DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCcc-----------------ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000 00133456789999999999999999999986
No 254
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.6e-34 Score=256.60 Aligned_cols=212 Identities=19% Similarity=0.220 Sum_probs=167.5
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||.|+||.||+|.+..++..||+|.+.... ....+.+..|+.+++.++||||+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4888999999999999999999999999999987432 2334578899999999999999986
Q ss_pred ---------------------------HHHHHHHHHHHHHHh-----hcCCCcEEecCCCCCCeEeCCCCceEEcccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLH-----HHCQELILHCDPKPSNVLLDNDLFAHIGDFELA 182 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH-----~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 182 (356)
+.++.+++.||.||| +.+ ++|+||+|+||+++.++.++|+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 347789999999999 766 999999999999999999999999999
Q ss_pred cccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchH
Q 039228 183 RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVM 262 (356)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 262 (356)
........ ......++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ........
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~------ 222 (265)
T cd08217 158 KILGHDSS----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLASKI------ 222 (265)
T ss_pred ccccCCcc----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHHHHH------
Confidence 86543221 1223567889999999998889999999999999999999999997432 11111111
Q ss_pred HHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 263 DIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 263 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
........ .......+.+++.+||+.+|++||++.+|+++
T Consensus 223 ---~~~~~~~~------------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 223 ---KEGKFRRI------------------PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---hcCCCCCC------------------ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00000000 01334467899999999999999999999874
No 255
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=271.21 Aligned_cols=216 Identities=21% Similarity=0.232 Sum_probs=173.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc---chHHHHHHHHHHhhcC-CCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG---ASKSFMAECKALKNIC-HRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l------------ 134 (356)
...|++.+.||+|.||.||+++.+.+|+.+|+|.+.+.... ....+.+|+.+|+++. |||||.+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 45699999999999999999999999999999999765443 3457899999999999 9999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC----CCceEEcccccccccc
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN----DLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~----~~~~kl~Dfg~a~~~~ 186 (356)
..++.+++.|+.|||+.| |+||||||+|+|+.. ++.+|++|||++....
T Consensus 114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 347789999999999999 999999999999963 3579999999998765
Q ss_pred cCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
. .......+||+.|+|||++....|+..+||||+|+++|.|++|.+||......... .......+
T Consensus 191 ~-----~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~-~~i~~~~~--------- 255 (382)
T KOG0032|consen 191 P-----GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF-LAILRGDF--------- 255 (382)
T ss_pred C-----CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH-HHHHcCCC---------
Confidence 4 23445688999999999999999999999999999999999999999754322211 11111110
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+... .|. .......+++..|+..||..|+|+.++++.
T Consensus 256 -~f~~~--------------~w~----~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 -DFTSE--------------PWD----DISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -CCCCC--------------Ccc----ccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 01111 111 334466899999999999999999999993
No 256
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.7e-34 Score=267.14 Aligned_cols=164 Identities=19% Similarity=0.250 Sum_probs=132.6
Q ss_pred ccccceec--CceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 76 LINLIGVG--SFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 76 ~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
++++||+| +||+||++....+++.||+|.+.... ....+.+..|+.+++.++||||+++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 46789999 78999999999999999999997542 2334567789999999999999986
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC-
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP- 191 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~- 191 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 347889999999999999 999999999999999999999999875433211110
Q ss_pred --CccCCCCccccccccchhhhcC--CCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 192 --TQSSSNGVRRTIGYTALDYDLG--SEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 192 --~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
.........++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 0111122356778999999876 45889999999999999999999999753
No 257
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.2e-34 Score=261.32 Aligned_cols=216 Identities=21% Similarity=0.285 Sum_probs=168.0
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|++.+.||.|+||.||+|.+..++..||+|.+........+.+..|+.++++++||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 4679999999999999999999988899999999986655566788999999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--- 157 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--- 157 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc---
Confidence 447889999999999999 9999999999999999999999999986543221
Q ss_pred ccCCCCccccccccchhhhc-----CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 193 QSSSNGVRRTIGYTALDYDL-----GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.......++..|++||.+. ...++.++|+||||+++|+|++|+.||....... ....... ..+ +
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~-~~~--------~ 226 (280)
T cd06611 158 -QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VLLKILK-SEP--------P 226 (280)
T ss_pred -cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHHHhc-CCC--------C
Confidence 1223356788999999875 3456789999999999999999999986431110 0100000 000 0
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+. ........+.+++..||+.+|.+||++.++++.
T Consensus 227 ~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 TLD--------------------QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CcC--------------------CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000 001233457889999999999999999999764
No 258
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.1e-33 Score=255.08 Aligned_cols=218 Identities=23% Similarity=0.309 Sum_probs=168.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc--chHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG--ASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|+||.||+|....+++.||+|.+...... ..+.+..|+.+++.++|+||+++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 488889999999999999999888999999999765443 56788999999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.+++.||.|||+.+ |+|+||+|+||++++++.+||+|||++...........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 347889999999999999 99999999999999999999999999987644332222
Q ss_pred cCCCCccccccccchhhhcCCC---CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSE---VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.......++..|++||++.+.. ++.++||||||+++|+|++|..||....... ........ .. .+.+.
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~---~~~~~~~~-~~-----~~~~~ 228 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF---QIMFHVGA-GH-----KPPIP 228 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH---HHHHHHhc-CC-----CCCCC
Confidence 1122356788999999998766 8899999999999999999999996432111 00000000 00 00000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
. .......+.+++.+||+.+|.+||++.+++.
T Consensus 229 ~--------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 229 D--------------------SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred c--------------------ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 0022445679999999999999999999874
No 259
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7.5e-34 Score=258.66 Aligned_cols=213 Identities=21% Similarity=0.245 Sum_probs=168.8
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
..|+..+.||.|+||.||+|.+..++..||+|.+.... ......+.+|+.+++.++||||+++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35788899999999999999999889999999987543 3345678899999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 84 ~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----~ 156 (277)
T cd06640 84 LGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----I 156 (277)
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc----c
Confidence 357789999999999998 9999999999999999999999999997553221 1
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
......++..|+|||++.+..++.++|+||||+++|||++|..||....... ... .+......
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~------------~~~~~~~~--- 219 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--VLF------------LIPKNNPP--- 219 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--Hhh------------hhhcCCCC---
Confidence 1223457888999999988889999999999999999999999986432110 000 00000000
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.....++..+.+++.+||+.+|++||++.+++..
T Consensus 220 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 ---------------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---------------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0112455678899999999999999999999776
No 260
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=267.48 Aligned_cols=220 Identities=19% Similarity=0.250 Sum_probs=177.3
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc--chHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG--ASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.+-|.+.+.||+|.|..|-+|++.-+|..||||++.+.... ....+.+|++.|+-++|||||++
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 45588999999999999999999999999999999765433 34578999999999999999998
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC-CCCceEEcccccccccccCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLD-NDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.||+.|+.|+|+.. +|||||||+|+.+- .-|-+||+|||++..+..+
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG- 172 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG- 172 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCc-
Confidence 347889999999999988 99999999999775 5688999999999765433
Q ss_pred CCCccCCCCccccccccchhhhcCCCCC-CccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVS-TNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
......+|++.|.|||++.+..|+ +++||||||||||.|++|++||+...+.. .+..++|-.
T Consensus 173 ----~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-------------TLTmImDCK 235 (864)
T KOG4717|consen 173 ----KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-------------TLTMIMDCK 235 (864)
T ss_pred ----chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-------------hhhhhhccc
Confidence 334568899999999999999987 67899999999999999999998654432 223333332
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH--HHHhhhhh
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD--LQSVNNIL 331 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~--L~~i~~~~ 331 (356)
.. .+.....++.+||..||..||.+|.+.++|... |+.+.+.+
T Consensus 236 Yt--------------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 236 YT--------------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGL 280 (864)
T ss_pred cc--------------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCc
Confidence 21 112455567899999999999999999988753 44444433
No 261
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.6e-34 Score=269.70 Aligned_cols=207 Identities=21% Similarity=0.268 Sum_probs=156.7
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhc-CCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNI-CHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l------------------- 134 (356)
+.||+|+||.||+|....+++.||+|++.... ....+.+..|+.++.++ +||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999997542 23345678899999888 59999886
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----~~~ 153 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG----DTT 153 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC----Cce
Confidence 347889999999999999 9999999999999999999999999987432111 122
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCC-ccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGD-LNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
....||+.|+|||++.+..++.++|||||||++|+|++|..||....... .......... +......
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~-------~~~~~~~----- 221 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV-------ILEKPIR----- 221 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH-------HHhCCCC-----
Confidence 34678999999999999999999999999999999999999996432211 1111111000 0000000
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP 318 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 318 (356)
.+......+.+++.+||+.||.+||++.
T Consensus 222 ---------------~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 222 ---------------IPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ---------------CCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 0001223567899999999999999853
No 262
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1e-33 Score=258.44 Aligned_cols=241 Identities=19% Similarity=0.191 Sum_probs=168.6
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||.|+||.||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4888999999999999999999889999999987543 3335678899999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 347789999999999999 99999999999999999999999999976543221
Q ss_pred cCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCC-CchHHHhhhhhcc
Q 039228 194 SSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP-NRVMDIVNLVLLN 271 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 271 (356)
.......++..|+|||++.+. .++.++||||+|+++|+|++|.+||..... ..........+. .....+-.-.-..
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHHHHHHcCCCChHHHhhccCcc
Confidence 122335678899999988654 468899999999999999999888754221 111111111111 0000000000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+.. .................+....+.+++.+||+.+|++||++++++..
T Consensus 233 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 233 DYN--KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhh--cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 00000000000000111334678899999999999999999999863
No 263
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-33 Score=299.22 Aligned_cols=231 Identities=19% Similarity=0.307 Sum_probs=181.2
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
..|....+||+|+||.||+|.+..++..||||.+...... ...|+..+++++|||||++
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~ 765 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI 765 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence 4577788999999999999999888999999998643221 2346889999999999987
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.|++.||+|||..+.++|+||||||+||+++.++..++. ||....... ..
T Consensus 766 ~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~--------~~ 836 (968)
T PLN00113 766 EGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT--------DT 836 (968)
T ss_pred CCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc--------CC
Confidence 4578899999999996544559999999999999998888775 665432211 11
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC-chHHHhhhhhccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN-RVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 276 (356)
...++..|+|||++.+..++.++|||||||++|||+||+.||+...........|.+..+.. ....++++.+.....
T Consensus 837 ~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 914 (968)
T PLN00113 837 KCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS-- 914 (968)
T ss_pred CccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC--
Confidence 23578899999999999999999999999999999999999976555555677776665533 344455554432211
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
...++...+.+++.+||+.||++||||.+|+++|+++....
T Consensus 915 --------------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 915 --------------VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred --------------ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 12355667889999999999999999999999999987754
No 264
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=9.1e-34 Score=266.49 Aligned_cols=246 Identities=20% Similarity=0.223 Sum_probs=171.8
Q ss_pred HHHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-------
Q 039228 64 YESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------- 134 (356)
Q Consensus 64 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------- 134 (356)
..++....++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 3455567899999999999999999999998889999999986432 2234567889999999999999875
Q ss_pred ----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccc
Q 039228 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180 (356)
Q Consensus 135 ----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 180 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||
T Consensus 89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~dfg 165 (345)
T cd07877 89 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG 165 (345)
T ss_pred ccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEeccc
Confidence 237789999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC--
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-- 257 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-- 257 (356)
++..... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ..+........
T Consensus 166 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~ 237 (345)
T cd07877 166 LARHTDD-------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTP 237 (345)
T ss_pred ccccccc-------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 9875422 1223467888999998866 56788999999999999999999999642211 11111111110
Q ss_pred CCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 258 PNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 258 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+......+.......+.. ..+.................+.+++.+|++.||.+||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 238 GAELLKKISSESARNYIQ---SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CHHHHhhcccHhHHHHHH---HhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 011110000000000000 000000000000000123357899999999999999999998865
No 265
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.4e-34 Score=260.63 Aligned_cols=221 Identities=20% Similarity=0.250 Sum_probs=168.4
Q ss_pred hHHHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhc-CCCChHHH-------
Q 039228 63 YYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNI-CHRNLVRF------- 134 (356)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l------- 134 (356)
+..++..+.+.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.++.++ +|+||+++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 33455556788999999999999999999999899999999986543 2345678899999988 69998864
Q ss_pred --------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEE
Q 039228 135 --------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHI 176 (356)
Q Consensus 135 --------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 176 (356)
..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence 336778999999999999 999999999999999999999
Q ss_pred cccccccccccCCCCCccCCCCccccccccchhhhc-----CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHH
Q 039228 177 GDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDL-----GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHN 251 (356)
Q Consensus 177 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~ 251 (356)
+|||++....... .......++..|+|||.+. +..++.++|+|||||++|+|++|..||...... ..
T Consensus 163 ~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~----~~ 234 (282)
T cd06636 163 VDFGVSAQLDRTV----GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM----RA 234 (282)
T ss_pred eeCcchhhhhccc----cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH----hh
Confidence 9999987543211 1223456888999999875 346788999999999999999999999642211 00
Q ss_pred HHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 252 FARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.. .+..... ... ....++..+.+++.+||+.||.+|||+.+|++
T Consensus 235 ~~---------~~~~~~~-~~~-----------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 LF---------LIPRNPP-PKL-----------------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hh---------hHhhCCC-CCC-----------------cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00 0000000 000 00123446789999999999999999999875
No 266
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-33 Score=260.24 Aligned_cols=213 Identities=20% Similarity=0.208 Sum_probs=165.6
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
|.....||.|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 4445579999999999999988899999999976555556678899999999999999987
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 103 ~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~----~~~~ 175 (297)
T cd06659 103 GALTDIVSQTRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV----PKRK 175 (297)
T ss_pred CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc----cccc
Confidence 347889999999999999 9999999999999999999999999987543221 1123
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...++..|+|||++.+..++.++||||||+++|||++|+.||..... .............. ..
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~--------~~------- 238 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSPPPK--------LK------- 238 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhccCCCC--------cc-------
Confidence 35678999999999988899999999999999999999999863211 01000000000000 00
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
........+.+++.+||+.+|++||++.+|++.
T Consensus 239 -------------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 239 -------------NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred -------------ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000223356789999999999999999999985
No 267
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.7e-34 Score=260.91 Aligned_cols=224 Identities=20% Similarity=0.248 Sum_probs=169.2
Q ss_pred hHHHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhc-CCCChHHH-------
Q 039228 63 YYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNI-CHRNLVRF------- 134 (356)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l------- 134 (356)
.+..+....++|++.+.||+|+||.||+|.+..+++.+|+|++... ......+.+|+.+++.+ +||||+++
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 3445566788999999999999999999999999999999997643 22345678899999999 69999975
Q ss_pred ---------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceE
Q 039228 135 ---------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAH 175 (356)
Q Consensus 135 ---------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 175 (356)
..++.+++.||.|||+.+ ++||||||+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEE
Confidence 226778999999999998 99999999999999999999
Q ss_pred EcccccccccccCCCCCccCCCCccccccccchhhhcC-----CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHH
Q 039228 176 IGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-----SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLH 250 (356)
Q Consensus 176 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~ 250 (356)
|+|||++....... .......|+..|+|||++.. ..++.++|||||||++|+|++|+.||..... ..
T Consensus 165 l~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~----~~ 236 (286)
T cd06638 165 LVDFGVSAQLTSTR----LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP----MR 236 (286)
T ss_pred EccCCceeecccCC----CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch----hH
Confidence 99999987653221 12223468899999998753 4478899999999999999999999864311 11
Q ss_pred HHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 251 NFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
...... .. ..+.+. . +......+.+++.+||+.||++|||+.+|++.+
T Consensus 237 ~~~~~~-~~-----~~~~~~-~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 237 ALFKIP-RN-----PPPTLH-Q-------------------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHhhcc-cc-----CCCccc-C-------------------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 110000 00 000000 0 001223578999999999999999999998753
No 268
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.4e-34 Score=273.88 Aligned_cols=223 Identities=22% Similarity=0.272 Sum_probs=168.2
Q ss_pred hcCCCCccccceecCceEEEEEEEC-----CCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcC-CCChHHH--------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFD-----LNRAVVAIKVLSIQCQ-GASKSFMAECKALKNIC-HRNLVRF-------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l-------- 134 (356)
..++|.+.+.||+|+||.||+|++. .++..||+|+++.... ...+.+..|+.+|.++. ||||+++
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3456888999999999999999964 3457899999975422 23457889999999998 9999876
Q ss_pred -----------------H--------------------------------------------------------------
Q 039228 135 -----------------I-------------------------------------------------------------- 135 (356)
Q Consensus 135 -----------------~-------------------------------------------------------------- 135 (356)
+
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 0
Q ss_pred ------------------------------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeE
Q 039228 136 ------------------------------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVL 167 (356)
Q Consensus 136 ------------------------------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIl 167 (356)
.++.|++.||.|||+.+ ++||||||+|||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEE
Confidence 14468999999999998 999999999999
Q ss_pred eCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCC
Q 039228 168 LDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGD 246 (356)
Q Consensus 168 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~ 246 (356)
++.++.++|+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSN--YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EeCCCEEEEEecCcceecccccc--cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 99999999999999976432221 111223456788999999998889999999999999999998 899986432111
Q ss_pred ccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 247 LNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
.+. ..+........ +..+...+.+++.+||+.+|.+||++++|++.|+.
T Consensus 350 -~~~------------~~~~~~~~~~~------------------p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 350 -QFY------------NAIKRGYRMAK------------------PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred -HHH------------HHHHcCCCCCC------------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 000 11111100000 01233467899999999999999999999999987
Q ss_pred hh
Q 039228 327 VN 328 (356)
Q Consensus 327 i~ 328 (356)
+.
T Consensus 399 ~~ 400 (401)
T cd05107 399 LL 400 (401)
T ss_pred Hh
Confidence 63
No 269
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=277.17 Aligned_cols=212 Identities=21% Similarity=0.332 Sum_probs=170.5
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFIS--------------- 136 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~--------------- 136 (356)
+.|.|+..||.|+||.||+|..+.++...|.|++.....+..+.++-|+.||...+||+||++++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 45788899999999999999999998888999998877788889999999999999999999832
Q ss_pred -----------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 137 -----------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 137 -----------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
+|.+++.||.|||++. |||||||..|||++-+|.++|+|||.+.... ...
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~----~t~ 184 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNK----STR 184 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccch----hHH
Confidence 7889999999999998 9999999999999999999999999985332 223
Q ss_pred cCCCCccccccccchhhhc-----CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC--CCchHHHhh
Q 039228 194 SSSNGVRRTIGYTALDYDL-----GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF--PNRVMDIVN 266 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 266 (356)
.....+.||+.|||||+.. ..+|+.++||||||++|.||..+.+|-..... +.-...... |..+ +
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp----MRVllKiaKSePPTL---l- 256 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP----MRVLLKIAKSEPPTL---L- 256 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch----HHHHHHHhhcCCCcc---c-
Confidence 3445689999999999864 46799999999999999999999999643211 111111110 1111 1
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+ ..-...+.+++..||..||..||++.+|++
T Consensus 257 ---qP---------------------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 257 ---QP---------------------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ---Cc---------------------chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 11 122335678999999999999999999875
No 270
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.4e-34 Score=266.03 Aligned_cols=164 Identities=24% Similarity=0.280 Sum_probs=138.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+++...+++.||+|++... .....+.+..|+.++..++|+||+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4799999999999999999999999999999999742 22234567889999999999999986
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 347789999999999999 99999999999999999999999999875433221
Q ss_pred CCccCCCCccccccccchhhhcC-----CCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLG-----SEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.......||+.|+|||++.. ..++.++|||||||++|+|++|+.||..
T Consensus 158 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 158 ---VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ---ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 11223468999999999863 4578899999999999999999999963
No 271
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.5e-34 Score=258.00 Aligned_cols=212 Identities=24% Similarity=0.343 Sum_probs=160.6
Q ss_pred ccceecCceEEEEEEECCCC------eEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNR------AVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+.||+|+||.||+|...... ..+|+|.+.... ......+.+|+.+++.++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 36899999999999986543 789999886442 2345678899999999999999976
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC-----ceEEccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL-----FAHIGDFEL 181 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-----~~kl~Dfg~ 181 (356)
+.++.+++.||.|||+.+ ++|+||+|+||+++.++ .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 236779999999999998 99999999999999877 899999999
Q ss_pred ccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCc
Q 039228 182 ARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNR 260 (356)
Q Consensus 182 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 260 (356)
+........ ........++..|+|||++.+..++.++|||||||++|+|++ |..||..... ......
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~-------- 225 (269)
T cd05044 158 ARDIYKSDY--YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQH-------- 225 (269)
T ss_pred ccccccccc--cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHH--------
Confidence 975532211 111222345678999999999999999999999999999998 9999863221 111111
Q ss_pred hHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 261 VMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
+....... .....+..+.+++.+||+.+|.+||++.+|++.|++
T Consensus 226 ----~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 226 ----VTAGGRLQ------------------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ----HhcCCccC------------------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00000000 001344567899999999999999999999999863
No 272
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.2e-34 Score=256.91 Aligned_cols=202 Identities=18% Similarity=0.273 Sum_probs=153.1
Q ss_pred ccceecCceEEEEEEECC------------CCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 78 NLIGVGSFDAVYQGVFDL------------NRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
+.||+|+||.||+|.... ....|++|.+..........+..|+.+++.++||||+++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998642 234689998876555555678889999999999999987
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCc-------eEEcccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF-------AHIGDFE 180 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~-------~kl~Dfg 180 (356)
+.++.||+.||+|||+.+ |+||||||+|||++.++. ++++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 458889999999999999 999999999999986654 8999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhc-CCCCCCccchHhHHHHHHHHH-cCCCCCCccccCCccHHHHHHHhCC
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDL-GSEVSTNGDAYNYGILLLEMV-TRRKPIDFMFEGDLNLHNFARMAFP 258 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlG~~l~ell-tg~~Pf~~~~~~~~~~~~~~~~~~~ 258 (356)
++..... .....++..|+|||++. +..++.++|||||||++|||+ +|..||...... .....
T Consensus 158 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~~~~~------ 221 (262)
T cd05077 158 IPITVLS--------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA--EKERF------ 221 (262)
T ss_pred CCccccC--------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh--HHHHH------
Confidence 9864421 12245678899999886 466889999999999999997 588887632111 00000
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
........ ......+.+|+.+||+.||++||++.+|++.|
T Consensus 222 ------~~~~~~~~--------------------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 222 ------YEGQCMLV--------------------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ------HhcCccCC--------------------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00000000 01123578999999999999999999999876
No 273
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=8.5e-34 Score=254.90 Aligned_cols=211 Identities=20% Similarity=0.238 Sum_probs=167.2
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|+||.||++....+++.||+|.+.... ....+.+.+|+.++++++||||+++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4888999999999999999999899999999987432 2334578899999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 457889999999999998 99999999999999999999999999975533211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......++..|+|||+..+..++.++|+||||+++|+|++|..||.... .. +.+...+.+
T Consensus 157 ---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~------------~~~~~~~~~ 216 (256)
T cd08218 157 ---LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MK------------NLVLKIIRG 216 (256)
T ss_pred ---hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HH------------HHHHHHhcC
Confidence 1123457888999999988889999999999999999999999986321 11 111111111
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.... ........+.+++.+||+.+|++||++.+|++
T Consensus 217 ~~~~---------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 217 SYPP---------------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCCC---------------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1100 00133446789999999999999999999986
No 274
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.5e-33 Score=255.43 Aligned_cols=215 Identities=18% Similarity=0.267 Sum_probs=154.9
Q ss_pred ccceecCceEEEEEEECC--CCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 78 NLIGVGSFDAVYQGVFDL--NRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
+.||+|+||.||+|.+.. ++..+|+|.+..... .....+.+|+.++++++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998653 456899998865432 233578889999999999999986
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 236779999999999999 99999999999999999999999999874332111
Q ss_pred ccCCCCccccccccchhhhcCC-------CCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHH
Q 039228 193 QSSSNGVRRTIGYTALDYDLGS-------EVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDI 264 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (356)
........++..|+|||++.+. .++.++||||||+++|||++ |..||....... ..... .......+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~~---~~~~~~~~ 230 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTYT---VREQQLKL 230 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHHH---hhcccCCC
Confidence 1122334567889999998642 35789999999999999996 999996432211 11110 00000000
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.++.+.. .....+.+++..|| .+|++|||+++|+..|+
T Consensus 231 ~~~~~~~----------------------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLKL----------------------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccCC----------------------CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1111100 12234678999999 68999999999998874
No 275
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.2e-33 Score=255.40 Aligned_cols=215 Identities=19% Similarity=0.219 Sum_probs=164.2
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-----ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-----QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+|++.+.||+|+||.||.|.+..++..||+|.+.... ....+.+.+|+.++++++||||+++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47999999999999999999999999999999986321 1224578889999999999999975
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 447889999999999999 99999999999999999999999999875532
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.... ........++..|+|||.+.+..++.++|+||||+++|+|++|+.||.... ............
T Consensus 159 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~-------- 225 (265)
T cd06652 159 ICLS-GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE----AMAAIFKIATQP-------- 225 (265)
T ss_pred cccc-ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc----hHHHHHHHhcCC--------
Confidence 2111 111223457889999999988889999999999999999999999986321 111111100000
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
... ..+......+.+++.+|+. +|++||++++|++
T Consensus 226 -~~~------------------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 -TNP------------------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -CCC------------------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 000 0011333456788889984 9999999999875
No 276
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.2e-33 Score=253.71 Aligned_cols=211 Identities=21% Similarity=0.257 Sum_probs=164.5
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-----ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-----QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
+|+..+.||+|+||.||+|....++..|++|.+.... ....+.+.+|+.+++.++|+||+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777889999999999999998888999999986543 2244678899999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS- 156 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccccc-
Confidence 347789999999999999 9999999999999999999999999987653322
Q ss_pred CCccCCCCccccccccchhhhcCCC-CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSE-VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
......++..|++||.+.... ++.++|+||||+++|+|++|..||..... ............ .
T Consensus 157 ----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~--------~ 220 (258)
T cd06632 157 ----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVFKIGRSKE--------L 220 (258)
T ss_pred ----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHHHHHhccc--------C
Confidence 123356788899999987766 88999999999999999999999964321 100000000000 0
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.. ........+.+++.+||+.+|++||++.+++.
T Consensus 221 -~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 -PP------------------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -CC------------------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 00 00122345678999999999999999999975
No 277
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.9e-34 Score=254.46 Aligned_cols=213 Identities=17% Similarity=0.237 Sum_probs=168.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|+..+.||.|+||.||.+....++..+++|.+.... ....+.+.+|+.++++++|+||+++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5888999999999999999999999999999986542 3445678899999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 346788999999999998 99999999999999999999999999976533221
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......++..|+|||++.+..++.++|+||||+++|+|++|..||.... ....... ....
T Consensus 157 ---~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~------------~~~~ 216 (256)
T cd08221 157 ---MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN-----PLNLVVK------------IVQG 216 (256)
T ss_pred ---cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHH------------HHcC
Confidence 2234567899999999988888999999999999999999999986321 1111111 1111
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.... ........+.+++.+||+.+|++||++.++++.+
T Consensus 217 ~~~~---------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 217 NYTP---------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCCC---------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0000 0012344678999999999999999999998753
No 278
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.2e-34 Score=254.99 Aligned_cols=213 Identities=21% Similarity=0.361 Sum_probs=163.9
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
.+|++.+.||+|+||.||+|.+.. +..+|+|.+.... .....+..|+.++++++|||++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 468889999999999999998864 5789999886432 234678899999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---~ 155 (256)
T cd05112 82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ---Y 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCc---c
Confidence 347788999999999999 9999999999999999999999999987543221 1
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
.......++..|+|||++.+..++.++||||||+++|||++ |..||..... ....... .......
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~---------~~~~~~~ 221 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVETI---------NAGFRLY 221 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHH---------hCCCCCC
Confidence 11122334678999999998889999999999999999998 9999864221 1111110 0000000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.. ...+..+.+|+.+||+.+|++|||+.++++.|
T Consensus 222 ~~------------------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 222 KP------------------RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CC------------------CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 00 01234678999999999999999999999987
No 279
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.5e-33 Score=252.90 Aligned_cols=213 Identities=23% Similarity=0.389 Sum_probs=164.9
Q ss_pred CCccccceecCceEEEEEEECCCC----eEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNR----AVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
|++.+.||.|+||.||+|.+...+ ..||+|.+...... ..+.+..|+.++..++|+||+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 456789999999999999998765 89999999755433 46788999999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 347788999999999999 9999999999999999999999999997654332
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
... .....++..|+|||.+.+..++.++|+||||+++|+|++ |..||.... ............
T Consensus 158 ~~~---~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~--~~~~~~~~~~~~----------- 221 (258)
T smart00219 158 YYK---KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS--NEEVLEYLKKGY----------- 221 (258)
T ss_pred ccc---cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCC-----------
Confidence 111 112336788999999988889999999999999999998 888886421 111111110000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
... .....+..+.+++.+||..+|++|||+.++++.|
T Consensus 222 -~~~------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 -RLP------------------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCC------------------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000 0012344678999999999999999999999864
No 280
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.3e-34 Score=261.38 Aligned_cols=223 Identities=22% Similarity=0.251 Sum_probs=169.0
Q ss_pred hHHHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhc-CCCChHHH-------
Q 039228 63 YYESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNI-CHRNLVRF------- 134 (356)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l------- 134 (356)
...++..++++|.+.+.||+|+||.||+|....+++.+|+|.+.... .....+..|+.+++++ +|||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 33455667889999999999999999999999999999999986432 2345677899999998 79999875
Q ss_pred ---------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceE
Q 039228 135 ---------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAH 175 (356)
Q Consensus 135 ---------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 175 (356)
..++.+++.||.|||+.+ ++|+||||+||+++.++.++
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEE
Confidence 236788999999999998 99999999999999999999
Q ss_pred EcccccccccccCCCCCccCCCCccccccccchhhhcCC-----CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHH
Q 039228 176 IGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-----EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLH 250 (356)
Q Consensus 176 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~ 250 (356)
|+|||++........ ......++..|+|||++... .++.++|||||||++|+|++|+.||...... .
T Consensus 169 l~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~----~ 240 (291)
T cd06639 169 LVDFGVSAQLTSTRL----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----K 240 (291)
T ss_pred Eeecccchhcccccc----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH----H
Confidence 999999876532211 12234578899999987543 3678999999999999999999998643211 1
Q ss_pred HHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 251 NFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
....... ... +.+. ........+.+++.+||+.+|++||++.++++.
T Consensus 241 ~~~~~~~-~~~-----~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 241 TLFKIPR-NPP-----PTLL--------------------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHHHhc-CCC-----CCCC--------------------cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1100000 000 0000 001223357899999999999999999999863
No 281
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.4e-33 Score=259.05 Aligned_cols=244 Identities=23% Similarity=0.250 Sum_probs=168.3
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRFI------------- 135 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~------------- 135 (356)
.++|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.++||||++++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 5789999999999999999999999999999999864422 2234577899999999999999862
Q ss_pred --------------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 136 --------------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 136 --------------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccch
Confidence 36778999999999999 9999999999999999999999999997
Q ss_pred ccccCCCC-------CccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHH
Q 039228 184 FRQEVSNP-------TQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255 (356)
Q Consensus 184 ~~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~ 255 (356)
........ .........+++.|+|||.+.+. .++.++|||||||++|+|++|++||....... ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~~~~~~~ 242 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QLHLIFKL 242 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 65432211 11122334668889999987654 57899999999999999999999996432211 11111111
Q ss_pred hCCCchHHHhhhhhccccc--cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 256 AFPNRVMDIVNLVLLNDNK--VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 256 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
........+.+........ ......+..... ........+.+++.+||+.||.+|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE----RFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCccHHH----HcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1000000000000000000 000000000000 01122356789999999999999999999875
No 282
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.8e-33 Score=252.55 Aligned_cols=211 Identities=19% Similarity=0.281 Sum_probs=165.0
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|+||.||+|....+++.+|+|.+.... ....+.+.+|+.+++.++|||++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4888999999999999999999999999999987542 2345678899999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC-CceEEcccccccccccCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND-LFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+++.||.|||+++ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 347789999999999999 9999999999999854 568999999998654321
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
......++..|+|||.+.+..++.++||||||+++|+|++|..||..... ........ .....
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~--------~~~~~ 219 (256)
T cd08220 157 ----KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIM--------SGTFA 219 (256)
T ss_pred ----cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHH--------hcCCC
Confidence 12235678899999999988889999999999999999999999864211 11111100 00000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.. .......+.+++.+||+.+|++|||+.+++..
T Consensus 220 -~~------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 -PI------------------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -CC------------------CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 00 00233457899999999999999999999863
No 283
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-34 Score=258.76 Aligned_cols=232 Identities=22% Similarity=0.333 Sum_probs=186.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHh--hcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALK--NICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l--------------- 134 (356)
....+.+.||+|.||+||+|.|. |+.||||+|.. .+...+.+|.++.+ .|+|+||+.|
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred heeEEEEEecCccccceeecccc--CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 45778899999999999999998 88999999973 33466778887776 4799999998
Q ss_pred -------------------------HHHHHHHHHHHHHHhh-----cCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 -------------------------ISIAIDVASALDYLHH-----HCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~-----~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
+.++..++.||++||. +|++.|.|||||+.|||+..++.+-|+|+|+|..
T Consensus 286 LvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred EeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 5688899999999995 4667799999999999999999999999999987
Q ss_pred cccCCCCCccCCCCccccccccchhhhcCCC----C--CCccchHhHHHHHHHHHcC----------CCCCCccccCCcc
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLGSE----V--STNGDAYNYGILLLEMVTR----------RKPIDFMFEGDLN 248 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~sDiwSlG~~l~elltg----------~~Pf~~~~~~~~~ 248 (356)
.....+.-....+..+||..|||||++...- + -..+||||||.++||+.-. ++||......+.+
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs 445 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS 445 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence 7666555556677789999999999986432 1 1457999999999999752 5788877777777
Q ss_pred HHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 249 LHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
+.++..-....++...++..+..+ +++..+.++|..||..||..|-|+-.+-+.|.++.
T Consensus 446 ~eeMrkVVCv~~~RP~ipnrW~s~---------------------~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 446 FEEMRKVVCVQKLRPNIPNRWKSD---------------------PALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred HHHHhcceeecccCCCCCcccccC---------------------HHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 766654433333333333333222 67888999999999999999999999999998886
Q ss_pred h
Q 039228 329 N 329 (356)
Q Consensus 329 ~ 329 (356)
+
T Consensus 505 ~ 505 (513)
T KOG2052|consen 505 N 505 (513)
T ss_pred c
Confidence 5
No 284
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.7e-33 Score=260.38 Aligned_cols=239 Identities=23% Similarity=0.263 Sum_probs=167.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.++|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.++++++|+||+++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 5679999999999999999999999999999999874432 223356789999999999999976
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 347889999999999999 9999999999999999999999999998654322
Q ss_pred CCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH---h
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI---V 265 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---~ 265 (356)
. ......++..|+|||.+.+ ..++.++|||||||++|+|++|.+||..... .................+ +
T Consensus 163 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 163 K----PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred C----CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChhhchhh
Confidence 1 1122344778999999865 4578999999999999999999999974321 111111111111000000 0
Q ss_pred hh-hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 266 NL-VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 266 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.. ................ . .........+.+++.+||+.||++|||+.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNL-K----HKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hcccccccccccCCCCCch-H----HhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0000000000000000 0 0001124456789999999999999999999863
No 285
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1e-33 Score=260.06 Aligned_cols=216 Identities=20% Similarity=0.214 Sum_probs=169.5
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.++|.+.+.||+|+||.||+|....++..||+|.+........+.+.+|+.+++.++|||++++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 3579999999999999999999988889999999876555556778999999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~----~ 170 (293)
T cd06647 98 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ----S 170 (293)
T ss_pred CCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccc----c
Confidence 347789999999999999 9999999999999999999999999987543222 1
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
......+++.|++||.+.+..++.++|+||||+++|++++|+.||........ .... ..... +.+.
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~---~~~~~------~~~~---- 236 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLI---ATNGT------PELQ---- 236 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeeh---hcCCC------CCCC----
Confidence 22234578889999999888899999999999999999999999964321110 0000 00000 0000
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
........+.+++.+||..+|++||++.+++.+
T Consensus 237 ----------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 ----------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ----------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001233457889999999999999999999875
No 286
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.4e-33 Score=261.73 Aligned_cols=251 Identities=20% Similarity=0.204 Sum_probs=174.0
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||.|+||.||+|....++..||+|.+.... ....+.+..|+.+++.++||||+++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4888999999999999999999889999999987543 3445678999999999999999887
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 237788999999999999 9999999999999999999999999998654432
Q ss_pred CCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
.. ........++..|+|||++.+. .++.++|+||||+++|+|++|.+||...... ...............+.....
T Consensus 158 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 158 DE-KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred cc-cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHhhhc
Confidence 11 1122335678899999999887 7899999999999999999999999754321 111111111100000000000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH--HHHhhh
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD--LQSVNN 329 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~--L~~i~~ 329 (356)
..............................+.+++.+||+.+|++||++.+++.. ++.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0000000000000000000000011234567899999999999999999999974 555543
No 287
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.5e-33 Score=260.55 Aligned_cols=211 Identities=24% Similarity=0.263 Sum_probs=164.0
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
...|.+.+.||+|+||.||+|....+++.||+|.+..... ...+.+.+|+.+++.++||||+++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 4568889999999999999999988899999999864322 233568899999999999999876
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 94 ~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 94 MEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred HHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 347789999999999999 999999999999999999999999998754321
Q ss_pred CCccCCCCccccccccchhhhc---CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDL---GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
....++..|+|||++. ...++.++||||||+++|||++|..||...... ..... +...
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~~~~~--------~~~~ 229 (307)
T cd06607 169 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYH--------IAQN 229 (307)
T ss_pred ------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----HHHHH--------HhcC
Confidence 2345678899999874 356888999999999999999999998632110 00000 0000
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
. ..... .......+.+++.+||+.+|++||++.+|+..
T Consensus 230 ~-~~~~~-----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 230 D-SPTLS-----------------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred C-CCCCC-----------------chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00000 01234567899999999999999999999874
No 288
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.8e-34 Score=258.73 Aligned_cols=202 Identities=18% Similarity=0.229 Sum_probs=152.9
Q ss_pred ccceecCceEEEEEEECCCCe-------EEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRA-------VVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+.||+|+||.||+|.....+. .||+|.+........+.+..|+.+++.++|||++++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999999865443 488888865555555678899999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCc--------eEEcccccccc
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF--------AHIGDFELARF 184 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~--------~kl~Dfg~a~~ 184 (356)
+.++.||+.||.|||+.+ |+||||||+||+++.++. ++++|||++..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 447889999999999999 999999999999987665 68999998864
Q ss_pred cccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCC-CCCCccccCCccHHHHHHHhCCCchH
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRR-KPIDFMFEGDLNLHNFARMAFPNRVM 262 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~-~Pf~~~~~~~~~~~~~~~~~~~~~~~ 262 (356)
... .....++..|+|||++.+ ..++.++||||||+++|+|++|. .||...... ....
T Consensus 158 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~~----------- 216 (258)
T cd05078 158 VLP--------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKLQ----------- 216 (258)
T ss_pred cCC--------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHHH-----------
Confidence 321 123456788999999976 45789999999999999999985 555421110 0000
Q ss_pred HHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 263 DIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 263 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
...... ..+ ......+.+++.+||+.||++|||++++++.|
T Consensus 217 -~~~~~~--~~~------------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 217 -FYEDRH--QLP------------------APKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -HHHccc--cCC------------------CCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000000 000 01123578999999999999999999999987
No 289
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=270.87 Aligned_cols=218 Identities=21% Similarity=0.366 Sum_probs=177.1
Q ss_pred CCccccceecCceEEEEEEECC----CCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDL----NRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
....+.||.|.||.||+|++.. .+-.||||..+... .+..+.|+.|.-+|++++||||+++
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmE 470 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVME 470 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEe
Confidence 4456789999999999999743 24569999988654 3456789999999999999999998
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
.-++.||+.||+|||+.. +|||||...|||+.....+||+|||+++.+....-.
T Consensus 471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY 547 (974)
T KOG4257|consen 471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY 547 (974)
T ss_pred cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence 337889999999999998 999999999999999999999999999988654422
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
......-..-|||||.+....++.+||||-|||.+||++. |..||.+....+.... +. .
T Consensus 548 ---kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~--------------iE---n 607 (974)
T KOG4257|consen 548 ---KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH--------------IE---N 607 (974)
T ss_pred ---hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE--------------ec---C
Confidence 2223344667999999999999999999999999999987 9999986544332110 00 0
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhh
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNN 329 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~ 329 (356)
-..+.-+++|+..|..|+.+||.++|.+||.+.++...|..+..
T Consensus 608 ---------------GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 608 ---------------GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ---------------CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 01122344899999999999999999999999999999999875
No 290
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.9e-34 Score=255.88 Aligned_cols=216 Identities=19% Similarity=0.268 Sum_probs=163.2
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc------cchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ------GASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
+|++.+.||.|+||.||+|... +++.+|+|.+..... .....+.+|+.+++.++|+||+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 4788899999999999999874 678999999864321 123468889999999999999886
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||+|||+.+ |+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 347789999999999999 9999999999999999999999999987653211
Q ss_pred C--CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 190 N--PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 190 ~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
. ..........++..|+|||++.+..++.++|+||||+++|+|++|..||....... ........ ... .+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~~~~--~~~-----~~ 228 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMFYIGAH--RGL-----MP 228 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHHHhhhc--cCC-----CC
Confidence 1 11122234567889999999998889999999999999999999999996432110 00000000 000 00
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+. ......+.+++.+||+.+|++||++.+++.
T Consensus 229 ~~~----------------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 229 RLP----------------------DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCC----------------------CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 123345789999999999999999999875
No 291
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=295.05 Aligned_cols=221 Identities=24% Similarity=0.259 Sum_probs=172.8
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHHHH----------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRFIS---------- 136 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~---------- 136 (356)
..+-++.-..+||.|.||.||.|.+.++|...|+|-+.... ....+.+.+|..++..++|||+|++++
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 34556788889999999999999999999999999886432 344567889999999999999999821
Q ss_pred ---------------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 137 ---------------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 137 ---------------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
+..|++.|++|||++| ||||||||.||+++.+|.+|++|||.|..+....
T Consensus 1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 4568999999999999 9999999999999999999999999998775543
Q ss_pred CCCccCCCCccccccccchhhhcCC---CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS---EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
...........||+.|||||++.+. ....+.||||+||++.||+||+.||.....+....-.......
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~--------- 1459 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHK--------- 1459 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCC---------
Confidence 2223344568899999999999763 3567889999999999999999999764333211111111111
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
++.+.....+-.+++..||..||..|+++.||++.
T Consensus 1460 ----------------------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1460 ----------------------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ----------------------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 11222334455789999999999999999887764
No 292
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.3e-33 Score=264.41 Aligned_cols=241 Identities=20% Similarity=0.230 Sum_probs=170.5
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhc-CCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNI-CHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l------------- 134 (356)
.++|++.+.||+|+||.||+|.+..++..+|+|.+... .......+.+|+.+++++ +||||+++
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 56799999999999999999999988999999988532 223345677899999999 99999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++........
T Consensus 86 lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 86 LVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred EEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 237789999999999999 99999999999999999999999999986543322
Q ss_pred C-CccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC--CC-chHHH-
Q 039228 191 P-TQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF--PN-RVMDI- 264 (356)
Q Consensus 191 ~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~--~~-~~~~~- 264 (356)
. .........++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||....... .........- +. ....+
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHH
Confidence 1 1122334568899999998754 457889999999999999999999996432211 1111111100 00 00000
Q ss_pred ---hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 265 ---VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 265 ---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+..+......... .. ..........+.+++.+||+.||++|||+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 242 SPFAATMLDSLPSRPRK----PL----DELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhHHHhhhhccccccc----ch----hhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000000000 00 00011235578899999999999999999999974
No 293
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.5e-33 Score=254.19 Aligned_cols=219 Identities=21% Similarity=0.298 Sum_probs=163.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc----------cchHHHHHHHHHHhhcCCCChHHH--------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ----------GASKSFMAECKALKNICHRNLVRF-------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l-------- 134 (356)
+|.+.+.||.|+||.||+|....+++.||+|.+..... ...+.+..|+.+++.++|||++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 47788999999999999999988899999998863211 112457789999999999999886
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccc
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR 185 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 185 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 336789999999999998 999999999999999999999999999754
Q ss_pred ccCCCCCccCCCCccccccccchhhhcCCC--CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHH
Q 039228 186 QEVSNPTQSSSNGVRRTIGYTALDYDLGSE--VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMD 263 (356)
Q Consensus 186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 263 (356)
..... ........++..|+|||.+.... ++.++|+||||+++|++++|..||.... ....... ........
T Consensus 159 ~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~----~~~~~~~-~~~~~~~~ 231 (272)
T cd06629 159 DDIYD--NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE----AIAAMFK-LGNKRSAP 231 (272)
T ss_pred ccccc--ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc----hHHHHHH-hhccccCC
Confidence 32211 11223356788999999987654 7899999999999999999999985321 1111110 00000000
Q ss_pred HhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 264 IVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 264 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+.... ....+..+.+++.+||..+|++||++.+|++.
T Consensus 232 ~~~~~~----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 232 PIPPDV----------------------SMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCccc----------------------cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000000 01234567899999999999999999999863
No 294
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.5e-33 Score=254.34 Aligned_cols=236 Identities=17% Similarity=0.163 Sum_probs=164.4
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcC-CCChHHH-----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNIC-HRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l----------------- 134 (356)
|++.+.||+|+||.||+|....++..||+|.++.... ........|+.++.++. |+|++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 6778899999999999999998899999999875422 22234557888898885 9999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ ++||||+|+||+++. +.+||+|||++........
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~-- 154 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP-- 154 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCC--
Confidence 447889999999999999 999999999999999 9999999999976533221
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.....++..|+|||++.. ..++.++|||||||++|||++|..||..... .................+. ..+..
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~ 228 (282)
T cd07831 155 ---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVL-KKFRK 228 (282)
T ss_pred ---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHH-Hhhcc
Confidence 122456889999997654 5578899999999999999999999964322 1111111111111111110 00000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.... ....+..............+..+.+++.+||+.+|++||++.++++
T Consensus 229 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 229 SRHM-NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccc-cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000 0000000000011111244668899999999999999999999986
No 295
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.1e-33 Score=261.34 Aligned_cols=222 Identities=20% Similarity=0.161 Sum_probs=167.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 468999999999999999999999999999999875432 234567889999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||+++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 346789999999999998 999999999999999999999999998742111000
Q ss_pred -----------CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCc
Q 039228 192 -----------TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNR 260 (356)
Q Consensus 192 -----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 260 (356)
.........++..|+|||++.+..++.++|+||||+++|||++|..||..... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----~~~~~~~---- 228 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQV---- 228 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH----
Confidence 00111234568889999999888899999999999999999999999863211 1111110
Q ss_pred hHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHH
Q 039228 261 VMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQS 326 (356)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~ 326 (356)
...... .. ......+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 229 ----~~~~~~-~~----------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 229 ----ISDDIE-WP----------------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ----HhcccC-CC----------------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 000000 00 0000233457899999999999999998777777765
No 296
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.1e-33 Score=252.71 Aligned_cols=211 Identities=22% Similarity=0.232 Sum_probs=165.7
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
+|++.+.||.|+||.||+|.+..++..||+|.+.... ....+.+.+|+.++++++||||+++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5889999999999999999999889999999997542 2345678999999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--- 154 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--- 154 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc---
Confidence 347789999999999998 9999999999999999999999999987553321
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
......++..|+|||++.+..++.++|+||||+++|+|++|..||...... ........ . .. ....
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~-~--------~~-~~~~ 220 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAK-Q--------ET-ADVL 220 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHH-h--------cc-cccc
Confidence 223355788899999998888999999999999999999999999743321 01111100 0 00 0000
Q ss_pred cccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCCh--HHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNV--PNAV 321 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~--~~vl 321 (356)
.+...+..+.+++.+||+.||.+||++ ++++
T Consensus 221 ------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 221 ------------------YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ------------------CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 011233567899999999999999999 5544
No 297
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.2e-33 Score=254.66 Aligned_cols=238 Identities=19% Similarity=0.172 Sum_probs=165.9
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc-----chHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG-----ASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
+|++.+.||.|+||.||+|.+..+++.||+|.+...... ....+..|+.+++.++|+||+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 478889999999999999999988999999999754322 33557789999999999999987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+++ |+|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 347889999999999999 99999999999999999999999999976543221
Q ss_pred CCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
......++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||...... ..+..............+.+...
T Consensus 158 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T cd07841 158 ----KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTS 232 (298)
T ss_pred ----cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhccc
Confidence 1122345778999998854 45788999999999999999998887642211 11111111110000000000000
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
............ .............+.+++.+||+.+|++|||+.+|+.
T Consensus 233 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 233 LPDYVEFKPFPP----TPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred ccccccccccCC----cchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000000 0000001133457889999999999999999999998
No 298
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2e-33 Score=252.66 Aligned_cols=202 Identities=20% Similarity=0.342 Sum_probs=155.7
Q ss_pred ccceecCceEEEEEEECCCC----------eEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNR----------AVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
+.||+|+||.||+|.+..++ ..+++|.+...... ...+.+|+.+++.++||||+++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEE
Confidence 36899999999999998765 45888887644333 5788899999999999999986
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC-------ceEEccccccc
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL-------FAHIGDFELAR 183 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-------~~kl~Dfg~a~ 183 (356)
+.++.||+.||.|||+.+ |+||||||+||+++.++ .++|+|||++.
T Consensus 80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 347789999999999998 99999999999999887 79999999997
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcCC--CCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCc
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS--EVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNR 260 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 260 (356)
.... .....++..|+|||++.+. .++.++||||||+++|+|++ |..||...... ....+..
T Consensus 157 ~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~------ 220 (259)
T cd05037 157 TVLS--------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQ------ 220 (259)
T ss_pred cccc--------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHh------
Confidence 5432 1123456789999998876 78899999999999999999 57777543211 1111100
Q ss_pred hHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 261 VMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
....... .....+.+++.+||..+|.+|||+.+|++.|.
T Consensus 221 -----~~~~~~~---------------------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 -----DQHRLPM---------------------PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -----cCCCCCC---------------------CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000000 00135789999999999999999999999873
No 299
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=249.50 Aligned_cols=216 Identities=16% Similarity=0.245 Sum_probs=165.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC----cc----chHHHHHHHHHHhhcC-CCChHHH-------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC----QG----ASKSFMAECKALKNIC-HRNLVRF------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~----~~~~~~~E~~~l~~l~-h~niv~l------- 134 (356)
-+.|.-.+.||+|..++|-++..+.++..+|+|++.... .+ ..+.-.+|+.+|+++. ||+|+++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 345777889999999999999999999999999986321 11 1234567999999975 9999987
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
..|..++..|+.|||... ||||||||+|||+|++.+++|+|||++..
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccceeec
Confidence 348899999999999998 99999999999999999999999999987
Q ss_pred cccCCCCCccCCCCccccccccchhhhc------CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCC
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDL------GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP 258 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 258 (356)
+..+. .....+||++|+|||.+. ...|+..+|+|++||++|.++.|.+||-.. ...-
T Consensus 173 l~~Ge-----kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--kQml---------- 235 (411)
T KOG0599|consen 173 LEPGE-----KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--KQML---------- 235 (411)
T ss_pred cCCch-----hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--HHHH----------
Confidence 75533 234588999999999874 346889999999999999999999998421 0000
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
++--.+.+.+. .-...|. +......+|+.+||+.||.+|.|++++++.
T Consensus 236 -----MLR~ImeGkyq--------F~speWa----dis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 236 -----MLRMIMEGKYQ--------FRSPEWA----DISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -----HHHHHHhcccc--------cCCcchh----hccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 01111111111 0011111 334456899999999999999999999863
No 300
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.5e-33 Score=253.93 Aligned_cols=214 Identities=21% Similarity=0.245 Sum_probs=151.9
Q ss_pred cceecCceEEEEEEECC--CCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH---------------------
Q 039228 79 LIGVGSFDAVYQGVFDL--NRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF--------------------- 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l--------------------- 134 (356)
.||+|+||.||+|.... ....+|+|.+..... .....+.+|+.+++.++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 68999999999997543 346788988764332 234568899999999999999986
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++........ .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~ 156 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--Y 156 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchh--e
Confidence 246789999999999999 99999999999999999999999999864322111 1
Q ss_pred cCCCCccccccccchhhhcC-------CCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 194 SSSNGVRRTIGYTALDYDLG-------SEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
.......++..|+|||++.. ..++.++|||||||++|||++ |..||....... .+........ ..+.
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~----~~~~ 231 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQD----IKLP 231 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhccC----ccCC
Confidence 11123445678999998743 356789999999999999999 788886432111 1111111000 0000
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.+.+ .......+.+++..|| .||++|||+++|++.|.
T Consensus 232 ~~~~----------------------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KPQL----------------------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCcc----------------------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0000 0123335567888898 59999999999999873
No 301
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.4e-33 Score=251.90 Aligned_cols=214 Identities=17% Similarity=0.247 Sum_probs=150.9
Q ss_pred cceecCceEEEEEEECCC--CeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH---------------------
Q 039228 79 LIGVGSFDAVYQGVFDLN--RAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF--------------------- 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l--------------------- 134 (356)
.||+|+||.||+|....+ ...+++|.+.... ....+.+.+|+.+++.++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 689999999999975433 3456777766443 2345678999999999999999986
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++....... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~--~~~ 156 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED--YIE 156 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcch--hhh
Confidence 246778999999999998 9999999999999999999999999986422111 111
Q ss_pred CCCCccccccccchhhhcC-------CCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 195 SSNGVRRTIGYTALDYDLG-------SEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
......++..|+|||++.. ..++.++||||||+++|||++ |..||..... .........+....+.+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~ 231 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLNHVIKDQQVKLFK 231 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHhhcccccCC
Confidence 2223567889999998743 245788999999999999997 5778753221 11111111111111111
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
+.+.. .....+.+++..|| .+|++||++++|++.|.
T Consensus 232 ~~~~~----------------------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLEL----------------------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccCC----------------------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11111 11224677889999 67999999999998874
No 302
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.4e-33 Score=255.80 Aligned_cols=234 Identities=25% Similarity=0.269 Sum_probs=164.9
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
|++.+.||.|++|.||+|.+..++..||+|++.... ......+.+|+.+++.++|||++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 677889999999999999999899999999987543 2234568889999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
+.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~---- 153 (283)
T cd07835 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV---- 153 (283)
T ss_pred CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc----
Confidence 347789999999999998 9999999999999999999999999997543221
Q ss_pred cCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-CCc-hHHHh--hhh
Q 039228 194 SSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-PNR-VMDIV--NLV 268 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~~-~~~~~--~~~ 268 (356)
.......++..|+|||++.+. .++.++|+||||+++|+|++|+.||...... ..+........ +.. ....+ .+.
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhhhhhchh
Confidence 111223457889999987654 4688999999999999999999999643211 11111111111 110 00000 000
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
....... ................+.+++.+||+.+|.+|||+.++++
T Consensus 233 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 233 YKPTFPK-------WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhccc-------ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000 0000000001123346789999999999999999999985
No 303
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.6e-33 Score=255.91 Aligned_cols=217 Identities=18% Similarity=0.265 Sum_probs=166.1
Q ss_pred CCCCccccceecCceEEEEEEECC-----CCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH-----------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDL-----NRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF----------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l----------- 134 (356)
++|++...||.|+||.||+|+.+. +.+.|++|.+...... ..+.+.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 568899999999999999999753 3468999988654333 45678999999999999999987
Q ss_pred -----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccc
Q 039228 135 -----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF 179 (356)
Q Consensus 135 -----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 179 (356)
..++.|++.||+|||+.+ |+||||||+||+++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 236789999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCC
Q 039228 180 ELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFP 258 (356)
Q Consensus 180 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 258 (356)
|++....... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ........
T Consensus 162 ~~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~~--- 233 (275)
T cd05046 162 SLSKDVYNSE---YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQA--- 233 (275)
T ss_pred ccccccCccc---ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHHc---
Confidence 9987442211 112233456778999999988888999999999999999998 88898632211 11111000
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.. +.... ...++..+.+++.+||+.+|++|||+.++++.|.
T Consensus 234 ~~--------~~~~~------------------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 GK--------LELPV------------------PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CC--------cCCCC------------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00 00000 0123446789999999999999999999999885
No 304
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.8e-33 Score=253.53 Aligned_cols=216 Identities=21% Similarity=0.272 Sum_probs=171.5
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
++|++.+.||.|++|.||+|.+..+++.|++|++..... .....+.+|+..+.+++|+||+++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 468899999999999999999999999999999876543 345778999999999999999987
Q ss_pred ---------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ---------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+.++.+++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-- 155 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-- 155 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCC--
Confidence 4588899999999999 98 99999999999999999999999999976543221
Q ss_pred ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLND 272 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (356)
......++..|+|||.+.+..++.++|+||||+++|+|++|..||..... .......... ........
T Consensus 156 --~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~--------~~~~~~~~ 223 (264)
T cd06623 156 --QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAI--------CDGPPPSL 223 (264)
T ss_pred --cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHH--------hcCCCCCC
Confidence 11235678899999999988899999999999999999999999975432 1111111111 10000000
Q ss_pred cccccccccchhhhhchhhHHH-HHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 273 NKVLAGTNSNMLRKTKMNSRLE-CLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... .+..+.+++.+||+.+|++||++.++++.
T Consensus 224 -------------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 224 -------------------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -------------------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 012 34568899999999999999999999874
No 305
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.6e-33 Score=253.93 Aligned_cols=235 Identities=22% Similarity=0.268 Sum_probs=168.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
+|++.+.||.|++|.||+|++..++..||+|.+..... .....+.+|+.+++.++||||+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 58899999999999999999999999999999875533 234567789999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--- 154 (284)
T cd07836 81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--- 154 (284)
T ss_pred CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---
Confidence 347889999999999999 9999999999999999999999999997543221
Q ss_pred ccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC---chHHHhhh-
Q 039228 193 QSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN---RVMDIVNL- 267 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~- 267 (356)
.......++..|++||++.+. .++.++|+||||+++|+|++|+.||....... ............ ....+.+.
T Consensus 155 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 155 -NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred -cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCc
Confidence 112234567889999988654 56889999999999999999999997533211 111111111100 11111100
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+... .+.................+.+++.+||+.||.+||++.++++
T Consensus 233 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 233 EYKPT-------FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhccc-------ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0000000001111234556789999999999999999999875
No 306
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.3e-33 Score=257.41 Aligned_cols=241 Identities=23% Similarity=0.238 Sum_probs=166.9
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.++|++.+.||.|+||.||+|.+..+++.+|+|.++.... .....+.+|+.++++++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 3579999999999999999999998899999999975432 223456789999999999999875
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 457889999999999999 9999999999999999999999999998654322
Q ss_pred CCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC--chHHHhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN--RVMDIVN 266 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 266 (356)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|..||....... ............ .......
T Consensus 161 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 161 ----KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred ----cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhh
Confidence 112234567889999998764 46889999999999999999999997432211 111111110000 0000000
Q ss_pred hh-hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 267 LV-LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 267 ~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.. ............. .+....+.. .....+.+++.+||+.+|++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYN-QLRKKFPAL--SLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccch-hhhcccccc--CCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 0000000000000 000000000 02446789999999999999999999985
No 307
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.2e-33 Score=264.35 Aligned_cols=164 Identities=21% Similarity=0.265 Sum_probs=137.6
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+++++.+++.||+|++... .......+..|+.++..++|+||+++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 4799999999999999999999999999999998642 12223457789999999999999876
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG- 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC-
Confidence 347789999999999999 9999999999999999999999999987543221
Q ss_pred CCccCCCCccccccccchhhhc-----CCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDL-----GSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
........||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 157 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 157 --TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred --cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 11223356899999999986 34678999999999999999999999963
No 308
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=6e-33 Score=260.58 Aligned_cols=238 Identities=20% Similarity=0.221 Sum_probs=168.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI--------------- 135 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~--------------- 135 (356)
..+|.+.+.||.|+||.||+|....+++.||+|.+........+.+.+|+.+++.++||||++++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 46799999999999999999999999999999999766656667788999999999999999753
Q ss_pred ----------------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC-CCCceEEcccc
Q 039228 136 ----------------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLD-NDLFAHIGDFE 180 (356)
Q Consensus 136 ----------------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg 180 (356)
.++.||+.||.|||+.+ |+||||||+||+++ .++.++|+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 84 SLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred cccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECCcc
Confidence 36678999999999999 99999999999997 56678999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN 259 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 259 (356)
++..+...... ........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||....... ....... ..+.
T Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~~~~-~~~~ 237 (342)
T cd07854 161 LARIVDPHYSH-KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQLILE-SVPV 237 (342)
T ss_pred cceecCCcccc-ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hcCC
Confidence 99765332111 111223456888999998754 567889999999999999999999996432211 1111111 0110
Q ss_pred c----hHHH---hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 260 R----VMDI---VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 260 ~----~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
. .... +...+.......... ...........+.+++.+||..||.+|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRP--------LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCC--------HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0 0000 000000000000000 00000123346789999999999999999999985
No 309
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=9.1e-34 Score=265.00 Aligned_cols=164 Identities=22% Similarity=0.269 Sum_probs=138.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||++++..+++.||+|++... .......+..|+.++..++|+||+++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4799999999999999999999999999999998642 12233457789999999999999876
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 336789999999999999 99999999999999999999999999976533221
Q ss_pred CCccCCCCccccccccchhhhcC-----CCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLG-----SEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 158 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 158 ---VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ---eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 12223568999999999875 4678899999999999999999999963
No 310
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.2e-33 Score=263.82 Aligned_cols=245 Identities=20% Similarity=0.219 Sum_probs=170.2
Q ss_pred HHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH----------
Q 039228 67 LLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF---------- 134 (356)
Q Consensus 67 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l---------- 134 (356)
+...+++|++.+.||.|+||.||+|.+..++..||+|.+... .....+.+..|+.+++.++||||+++
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 345678899999999999999999999999999999988543 22334678899999999999999986
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||.+.....
T Consensus 85 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~- 160 (328)
T cd07856 85 IYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQDP- 160 (328)
T ss_pred EEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccccCC-
Confidence 336789999999999999 99999999999999999999999999874321
Q ss_pred CCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... ...............++...
T Consensus 161 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 161 ------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHh
Confidence 1123456788999998765 56889999999999999999999999643210 11111111111001111110
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
...............................+.+++.+||+.+|++||++.+++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000000000000000011234578899999999999999999998765
No 311
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.3e-33 Score=254.10 Aligned_cols=214 Identities=23% Similarity=0.356 Sum_probs=163.9
Q ss_pred CCCccccceecCceEEEEEEECC-CCeEEEEEEeeccC----------ccchHHHHHHHHHHhh-cCCCChHHH------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDL-NRAVVAIKVLSIQC----------QGASKSFMAECKALKN-ICHRNLVRF------ 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l------ 134 (356)
+|++.+.||+|+||.||+|.+.. +++.+|+|.+.... ......+..|+.++.+ ++||||+++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 67899999885321 2233457788887764 799999986
Q ss_pred -----------------------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcc
Q 039228 135 -----------------------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGD 178 (356)
Q Consensus 135 -----------------------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~D 178 (356)
+.++.+++.||.|||+ .+ ++|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 3467799999999996 66 99999999999999999999999
Q ss_pred cccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCC
Q 039228 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP 258 (356)
Q Consensus 179 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 258 (356)
||.+....... ......++..|++||.+.+..++.++|+||||+++|+|++|+.||... ........
T Consensus 158 fg~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-----~~~~~~~~--- 224 (269)
T cd08528 158 FGLAKQKQPES-----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST-----NMLSLATK--- 224 (269)
T ss_pred ccceeeccccc-----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc-----CHHHHHHH---
Confidence 99997643321 223456788999999999888999999999999999999999998632 11111111
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
+.+........ ......+.+++.+||+.||++||++.+|.++|.
T Consensus 225 -----~~~~~~~~~~~------------------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 225 -----IVEAVYEPLPE------------------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -----HhhccCCcCCc------------------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 01100000000 012345789999999999999999999999885
No 312
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.6e-33 Score=255.12 Aligned_cols=216 Identities=22% Similarity=0.295 Sum_probs=165.9
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhc-CCCChHHH-------------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNI-CHRNLVRF------------- 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l------------- 134 (356)
..+++|++.+.||.|++|.||+|.+..+++.+++|++..... ..+.+.+|+.+++++ +|+||+++
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 356889999999999999999999988889999999875533 346788999999998 69998764
Q ss_pred ----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccc
Q 039228 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180 (356)
Q Consensus 135 ----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 180 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 237778999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhcC-----CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHH
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-----SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM 255 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~ 255 (356)
++....... .......++..|+|||++.. ..++.++||||||+++|+|++|..||...... ........
T Consensus 159 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~- 232 (275)
T cd06608 159 VSAQLDSTL----GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFKIPR- 232 (275)
T ss_pred cceecccch----hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHHhhc-
Confidence 987543221 12233567889999998753 34678899999999999999999999632111 01111000
Q ss_pred hCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 256 AFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 256 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.. .+.+ .........+.+++.+||..||++|||+.+|++
T Consensus 233 ---~~-----~~~~--------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 ---NP-----PPTL--------------------KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ---cC-----CCCC--------------------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00 0000 000123456789999999999999999999986
No 313
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.9e-34 Score=266.61 Aligned_cols=155 Identities=27% Similarity=0.299 Sum_probs=127.4
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhc---CCCChHHH-------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNI---CHRNLVRF------------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l------------------- 134 (356)
||+|+||.||+|++..+++.||+|++..... .....+..|..++... +||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 6999999999999999999999999864321 2233455677777665 69999876
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.||+.||+|||+.+ |+||||||+|||++.++.++|+|||+++...... ...
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~----~~~ 153 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN----KTT 153 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC----CCc
Confidence 347889999999999999 9999999999999999999999999987532211 122
Q ss_pred CCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 197 NGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
....||..|+|||++.+. .++.++|||||||++|+|++|..||..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 346789999999998754 478999999999999999999999964
No 314
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.8e-33 Score=256.03 Aligned_cols=201 Identities=20% Similarity=0.292 Sum_probs=151.0
Q ss_pred cceecCceEEEEEEECC------------------------CCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH
Q 039228 79 LIGVGSFDAVYQGVFDL------------------------NRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 134 (356)
.||+|+||.||+|.... ....||+|++..........+..|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 68999999999998532 124689999875544445678889999999999999986
Q ss_pred --------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC----
Q 039228 135 --------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL---- 172 (356)
Q Consensus 135 --------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---- 172 (356)
+.++.||+.||+|||+.+ |+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcccC
Confidence 458889999999999998 99999999999997543
Q ss_pred ---ceEEcccccccccccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHH-HcCCCCCCccccCCc
Q 039228 173 ---FAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEM-VTRRKPIDFMFEGDL 247 (356)
Q Consensus 173 ---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~el-ltg~~Pf~~~~~~~~ 247 (356)
.++++|||++..... .....++..|+|||.+.+ ..++.++||||||+++||| ++|..||.......
T Consensus 159 ~~~~~kl~d~g~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~- 229 (274)
T cd05076 159 TSPFIKLSDPGVSFTALS--------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE- 229 (274)
T ss_pred ccceeeecCCcccccccc--------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH-
Confidence 479999998753321 112346778999998865 5688999999999999998 47999986432111
Q ss_pred cHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 248 NLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.... +....... . .....+.+++.+||+.+|++|||+.+|++.|
T Consensus 230 -~~~~------------~~~~~~~~-~-------------------~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 -KERF------------YEKKHRLP-E-------------------PSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred -HHHH------------HHhccCCC-C-------------------CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1111 11100000 0 1112478899999999999999999999887
No 315
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-34 Score=269.90 Aligned_cols=222 Identities=22% Similarity=0.296 Sum_probs=177.5
Q ss_pred cCCCCccccceecCceEEEEEEECCC---CeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLN---RAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+...+.+.||+|.||.|++|.|... ...||||.+...... ....|++|+.+|.+|+|+|++++
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV 188 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMV 188 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHH
Confidence 34566778999999999999999753 357999999755443 56789999999999999999987
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
.+++.||+.|+.||..++ +|||||...|+|+.....+||+|||+.+-+...
T Consensus 189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 348899999999999999 999999999999999999999999999988766
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
...... .....-...|.|||.+....++.++|||+|||++|||+| |..||.+.... .+...+|.
T Consensus 266 ed~Yvm-~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--------------qIL~~iD~ 330 (1039)
T KOG0199|consen 266 EDMYVM-APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--------------QILKNIDA 330 (1039)
T ss_pred CcceEe-cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------------HHHHhccc
Confidence 554322 222334678999999999999999999999999999999 88998753211 12222332
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
.- ....+..|++.+.+++..||..+|++|||+..|.+.+-...
T Consensus 331 ~e------------------rLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 331 GE------------------RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred cc------------------cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 11 11223379999999999999999999999999986554433
No 316
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.9e-33 Score=254.28 Aligned_cols=239 Identities=20% Similarity=0.196 Sum_probs=164.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcC-CCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNIC-HRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.+. ||||+++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468999999999999999999999999999999864422 23457888999999995 5999876
Q ss_pred --------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC-CCceEEccccc
Q 039228 135 --------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN-DLFAHIGDFEL 181 (356)
Q Consensus 135 --------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~ 181 (356)
..++.||+.||.|||+.+ |+||||+|+||+++. ++.++|+|||+
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeeccc
Confidence 336789999999999999 999999999999998 89999999999
Q ss_pred ccccccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCc
Q 039228 182 ARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNR 260 (356)
Q Consensus 182 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 260 (356)
+....... .......+++.|+|||++.+ ..++.++|+||||+++|+|++|..||....... .............
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 232 (295)
T cd07837 158 GRAFSIPV----KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPT 232 (295)
T ss_pred ceecCCCc----cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 87543221 11122345788999998865 457899999999999999999999996422111 1111111100000
Q ss_pred hHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 261 VMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
...+....-...........+.... .........+.+++.+||..||.+||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLS----RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHH----HhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000000000000000000 001134456789999999999999999999875
No 317
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.2e-33 Score=255.49 Aligned_cols=207 Identities=25% Similarity=0.230 Sum_probs=163.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
++|++.+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.++++++||||+++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46899999999999999999999889999999986432 2334678899999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 347789999999999999 999999999999999999999999998765322
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.....+++.|+|||.+.+..++.++||||||+++|+|++|..||..... .........+. ..+.
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~------~~~~- 218 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQIYEKILEGK------VRFP- 218 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhcCC------ccCC-
Confidence 2234678899999999888889999999999999999999999864221 11110000000 0000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAV 321 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl 321 (356)
......+.+++.+||..||.+|| ++++++
T Consensus 219 ---------------------~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 219 ---------------------SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ---------------------ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 01223567999999999999999 556655
No 318
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.7e-33 Score=261.42 Aligned_cols=241 Identities=21% Similarity=0.215 Sum_probs=167.6
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
..++|++.+.||+|+||.||+|.+..++..||||++.... ......+.+|+.+++.++||||+++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999999999999999986432 2234568899999999999999865
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred ceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 347789999999999999 9999999999999999999999999997543
Q ss_pred cCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
.. .....++..|++||.+.+ ..++.++|+||||+++|++++|..||...... ............ ....+.
T Consensus 170 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~ 240 (343)
T cd07880 170 SE-------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGT-PSKEFV 240 (343)
T ss_pred cC-------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCC-CCHHHH
Confidence 21 123456888999999876 45788999999999999999999999743211 011111111000 000100
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.............................+...+.+++.+|++.||++|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000000000000000000011123446789999999999999999999984
No 319
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.8e-33 Score=252.77 Aligned_cols=237 Identities=22% Similarity=0.261 Sum_probs=167.1
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
|++.+.||.|+||.||+|.+..+++.+|+|.+.... ......+.+|+.+++.++|||++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 677889999999999999999889999999998653 3344678899999999999999876
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+.++.+++.||+|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 347889999999999999 99999999999999999999999999986544321
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHH--hhhh-
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDI--VNLV- 268 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 268 (356)
.......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... .................+ ....
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 156 -ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred -ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchhhccccccch
Confidence 11223456788999997765 45789999999999999999999999643321 111111111100000000 0000
Q ss_pred hccccccccccccchhhhhchhhHHH-HHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLE-CLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
....... ......... ..... +...+.+++.+||..+|.+||++.++++
T Consensus 234 ~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKP-KKPYKRRLR----EFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccc-cccchhHHH----HHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000 000000000 01111 2567899999999999999999999986
No 320
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=5.6e-33 Score=255.41 Aligned_cols=217 Identities=18% Similarity=0.229 Sum_probs=162.8
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcC-CCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNIC-HRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l------------- 134 (356)
..++|++.+.||+|+||.||+|.+..+++.||||.++.... .....+..|+.++.+.. ||||+++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 34679999999999999999999998899999999975432 23455677887666665 9999998
Q ss_pred ------------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 ------------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.+++.||.|||+ .+ |+||||+|+||+++.++.++|+|||++.......
T Consensus 93 ~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 93 MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 2478899999999997 47 9999999999999999999999999987553221
Q ss_pred CCCccCCCCccccccccchhhhcCCC----CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSE----VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
......++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... .. ... .++
T Consensus 170 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~-~~~--------~~~ 232 (296)
T cd06618 170 -----AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---FE-VLT--------KIL 232 (296)
T ss_pred -----cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---HH-HHH--------HHh
Confidence 112234678899999987554 788999999999999999999998642111 10 000 011
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
..... ... ....+...+.+++.+||+.||++||++.+++..
T Consensus 233 ~~~~~-~~~----------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 233 QEEPP-SLP----------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred cCCCC-CCC----------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 10000 000 000233467899999999999999999999865
No 321
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.4e-32 Score=250.41 Aligned_cols=236 Identities=23% Similarity=0.257 Sum_probs=168.2
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
|++.+.||.|++|.||+|....+++.+++|.+..... .....+..|+.++++++|+||+++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 5677899999999999999988899999999875432 234678889999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||.+....... .
T Consensus 81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----~ 153 (283)
T cd05118 81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----R 153 (283)
T ss_pred CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc----c
Confidence 347789999999999999 9999999999999999999999999997654322 1
Q ss_pred CCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCC---CchHHHhhhhhc
Q 039228 195 SSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP---NRVMDIVNLVLL 270 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~ 270 (356)
......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||......+ .+......... .....+.+....
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGTPDPEVWPKFTSLARN 232 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCchHhcccchhhhhh
Confidence 11224567889999998776 78899999999999999999999986432111 11111111000 000000000000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.... ...-...............+.+++..||+.||.+||++.+++.
T Consensus 233 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 233 YKFS-----FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhh-----hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000 0000000001112245667899999999999999999999985
No 322
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=6.1e-33 Score=260.66 Aligned_cols=242 Identities=19% Similarity=0.216 Sum_probs=167.7
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
..++|.+...||+|++|.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 367899999999999999999999999999999998643 22334567789999999999999876
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++....
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred ccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 236678999999999999 9999999999999999999999999997543
Q ss_pred cCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
.. .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... ..+.... .........+.
T Consensus 170 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~-~~~~~~~~~~~ 240 (343)
T cd07851 170 DE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIM-NLVGTPDEELL 240 (343)
T ss_pred cc-------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-HhcCCCCHHHH
Confidence 21 223456888999998865 36788999999999999999999999642211 0111111 11110001111
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.................................+.+++.+||+.+|++|||+.+|+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 1000000000000000000000000011234578899999999999999999998753
No 323
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=8.4e-33 Score=252.99 Aligned_cols=212 Identities=18% Similarity=0.188 Sum_probs=165.1
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
|...+.||.|++|.||+|....+++.+++|.+........+.+.+|+.+++.++||||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 4555789999999999999988899999999875555555678899999999999999986
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.+++.||+|||+.+ ++||||+|+||+++.++.++|+|||++....... ....
T Consensus 101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~----~~~~ 173 (285)
T cd06648 101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV----PRRK 173 (285)
T ss_pred CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC----cccc
Confidence 348889999999999999 9999999999999999999999999886543221 1122
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...|+..|+|||.+.+..++.++|+||||+++|+|++|..||..... .......... ..+.+.
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~~~-----~~~~~~------- 236 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIRDN-----LPPKLK------- 236 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHHhc-----CCCCCc-------
Confidence 35578899999999888899999999999999999999999863211 1111100000 000000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
........+.+++.+||..+|++||++.++++
T Consensus 237 -------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 237 -------------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -------------ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 00023346789999999999999999999985
No 324
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.1e-33 Score=249.21 Aligned_cols=212 Identities=21% Similarity=0.265 Sum_probs=165.1
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|+||.||+|....++..||+|.+.... ....+.+.+|+.+++.++|+||+++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4888999999999999999999999999999986542 2334578899999999999999998
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC-ceEEcccccccccccCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL-FAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+++.||.|||+.+ ++|+||+|+||++++++ .++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 346788999999999999 99999999999999875 46999999997654321
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.......|++.|+|||+..+..++.++|+||||+++|+|++|..||.... ........... .+.
T Consensus 157 ---~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~--------~~~ 220 (257)
T cd08225 157 ---ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQG--------YFA 220 (257)
T ss_pred ---ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcc--------cCC
Confidence 11223457889999999988889999999999999999999999986321 11211111111 000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... ......+.+++.+||..+|++|||+.+|++.
T Consensus 221 ~~~-------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 PIS-------------------PNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCC-------------------CCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 000 0223357899999999999999999999763
No 325
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-34 Score=266.88 Aligned_cols=216 Identities=18% Similarity=0.252 Sum_probs=164.1
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeec--cCccchHHHHHHHHHHhhcC-CCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSI--QCQGASKSFMAECKALKNIC-HRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l------------- 134 (356)
...|++++.||+||.+.||++..... +.||+|.+.. .+.....-|.+|+..|.+|+ |.+||++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 34699999999999999999987654 6777776542 23344567999999999997 8899987
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..+..||+.|+.++|.+| |||.||||.|+|+- .|.+||+|||.|..+.....
T Consensus 439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence 347889999999999999 99999999999986 57899999999987765443
Q ss_pred CCccCCCCccccccccchhhhcCCC-----------CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSE-----------VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN 259 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 259 (356)
......-+||+.||+||.+.... .+.++||||||||||+|+.|+.||.. +.... .
T Consensus 515 --sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~-------~~n~~-----a 580 (677)
T KOG0596|consen 515 --SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ-------IINQI-----A 580 (677)
T ss_pred --ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH-------HHHHH-----H
Confidence 23344568999999999886432 56789999999999999999999963 11111 1
Q ss_pred chHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 260 RVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 260 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+..+.++.-.-.++.. ....+++.++..||..||++||++.+||+
T Consensus 581 Kl~aI~~P~~~Iefp~~-----------------~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 KLHAITDPNHEIEFPDI-----------------PENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHHhhcCCCccccccCC-----------------CCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 12233444222122110 01112789999999999999999999986
No 326
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.9e-33 Score=257.45 Aligned_cols=213 Identities=25% Similarity=0.294 Sum_probs=164.9
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
|...+.||+|+||.||+|++..++..||+|.+..... .....+.+|+.+++.++|||++++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 7778899999999999999998899999999874322 234568889999999999999876
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 107 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------ 177 (317)
T cd06635 107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP------ 177 (317)
T ss_pred CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC------
Confidence 347789999999999999 99999999999999999999999999864322
Q ss_pred cCCCCccccccccchhhhc---CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 194 SSSNGVRRTIGYTALDYDL---GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.....++..|+|||++. ...++.++|||||||++|+|++|..||....... .... +......
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~------------~~~~~~~ 242 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYH------------IAQNESP 242 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHH------------HHhccCC
Confidence 12345788899999974 4568899999999999999999999986421100 0101 1110000
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhh
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVN 328 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~ 328 (356)
... .......+.+++.+||+.+|.+||++.+|++.+-...
T Consensus 243 ~~~------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 243 TLQ------------------SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred CCC------------------CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 000 0123345789999999999999999999998765443
No 327
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.7e-33 Score=246.09 Aligned_cols=168 Identities=29% Similarity=0.355 Sum_probs=141.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCC----eEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH----------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNR----AVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF---------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l---------- 134 (356)
...|+.++.||+|.||.||+|..+.++ ..+|||.++.+ .........+|+.+++.++|||++.+
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 456999999999999999999766553 37899999754 33445678899999999999999987
Q ss_pred --------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC----CceEEcc
Q 039228 135 --------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND----LFAHIGD 178 (356)
Q Consensus 135 --------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~----~~~kl~D 178 (356)
..|+.||+.|+.|||++= |+||||||.|||+..+ |.+||+|
T Consensus 103 v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 103 VWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence 347889999999999987 9999999999999876 9999999
Q ss_pred cccccccccCCCCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 179 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
||+++.+.....+ ......++-|..|.|||.+.|. .|+.+.|||++|||+.||+|-.+-|...
T Consensus 180 lGlaR~~~~plkp-l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 180 LGLARLFNNPLKP-LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred ccHHHHhhccccc-cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9999987654432 2234557789999999999875 5899999999999999999999888653
No 328
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6.3e-33 Score=252.57 Aligned_cols=212 Identities=20% Similarity=0.243 Sum_probs=165.8
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
-|++.+.||.|+||.||+|.+..++..||+|.+.... ....+.+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3778889999999999999998889999999986432 2334578899999999999999976
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 85 ~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~----~~ 157 (277)
T cd06641 85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ----IK 157 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch----hh
Confidence 457889999999999999 9999999999999999999999999987553221 11
Q ss_pred CCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
.....++..|+|||.+.+..++.++|+|||||++|+|++|..||...... ..... +.......
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~---------~~~~~~~~--- 220 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFL---------IPKNNPPT--- 220 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHH---------HhcCCCCC---
Confidence 22345788899999998888899999999999999999999998642111 00000 00000000
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.....+..+.+++.+||+.+|.+||++.+++..
T Consensus 221 ---------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 ---------------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---------------CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 001234467899999999999999999999984
No 329
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-33 Score=241.02 Aligned_cols=216 Identities=17% Similarity=0.220 Sum_probs=163.9
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc-CccchHHHHHHHHHHhhc-CCCChHHHHH-------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKNI-CHRNLVRFIS------------- 136 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~------------- 136 (356)
++.+.+..||.|.-|.|++++...+|...|||.+... +.+..++++..++++..- +.|.||+.++
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 4566778899999999999999999999999999754 445567888888876654 4899998621
Q ss_pred ------------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 137 ------------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 137 ------------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+...++.||.||.++. .|||||+||+|||+|+.|++||+|||.+-++...
T Consensus 172 lMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS---- 245 (391)
T KOG0983|consen 172 LMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS---- 245 (391)
T ss_pred HHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc----
Confidence 3345889999998754 3999999999999999999999999999876543
Q ss_pred ccCCCCccccccccchhhhcC---CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 193 QSSSNGVRRTIGYTALDYDLG---SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.......|-+.|||||.+.- ..|+.++||||||++++||.||+.||.....+..-+..... ..| +.+
T Consensus 246 -kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~eP--------P~L 315 (391)
T KOG0983|consen 246 -KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEP--------PLL 315 (391)
T ss_pred -cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCC--------CCC
Confidence 23344667889999998853 46889999999999999999999999864333211211111 111 111
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... ......+.+++..||..|+.+||...++++.
T Consensus 316 ~~~--------------------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 316 PGH--------------------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred Ccc--------------------cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 110 0123357899999999999999999998864
No 330
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=9e-33 Score=249.70 Aligned_cols=215 Identities=18% Similarity=0.199 Sum_probs=165.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc-----CccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-----CQGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
.+|.+.+.||+|+||.||+|.+..++..||+|.+... .......+.+|+.++++++|+||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4799999999999999999999999999999997532 12234578889999999999999986
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 447789999999999999 99999999999999999999999999986532
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNL 267 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (356)
.... ........++..|+|||++.+..++.++|+|||||++|+|++|+.||..... ...... ....
T Consensus 159 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~---------~~~~ 224 (264)
T cd06653 159 ICMS-GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAIFK---------IATQ 224 (264)
T ss_pred cccc-CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHHHH---------HHcC
Confidence 2111 1112235678899999999988899999999999999999999999964211 111100 0000
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
...... +......+.+++.+||. +|..||++.+++.
T Consensus 225 ~~~~~~------------------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 225 PTKPML------------------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCCC------------------CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 000000 01233467899999999 5799999998875
No 331
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=262.97 Aligned_cols=225 Identities=22% Similarity=0.289 Sum_probs=180.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+...+.+.||+|.||.|.++.... +..||||+++..... ....|..|+++|.+++||||+++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 456788999999999999999874 599999999865443 34789999999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.||.||+.|++||.+.. +|||||.+.|+|+|.++++||+|||+++-+-...-
T Consensus 617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y- 692 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY- 692 (807)
T ss_pred HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc-
Confidence 569999999999999998 99999999999999999999999999986543322
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc--CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT--RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.......+-...|||+|.+..+++++++|+|+||+++||+++ ...||..+.+++ ..+-....++..-.
T Consensus 693 -y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~~~~~~------- 762 (807)
T KOG1094|consen 693 -YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFFRDQGR------- 762 (807)
T ss_pred -eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhcCCCCc-------
Confidence 233345666789999999999999999999999999999865 788987554332 22222222222111
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
...+..++-|+..+.++++.||..+-.+||++++|...|++.
T Consensus 763 ----------------~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 763 ----------------QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ----------------ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 112233347888899999999999999999999999988764
No 332
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.9e-33 Score=254.10 Aligned_cols=241 Identities=24% Similarity=0.294 Sum_probs=167.7
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
..++|++.+.||.|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4578999999999999999999999889999999997543 2233567789999999999999974
Q ss_pred ----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccc
Q 039228 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180 (356)
Q Consensus 135 ----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 180 (356)
..++.|++.||.|||+.+ |+|+||+|+||++++++.+||+|||
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeCccc
Confidence 347789999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC--
Q 039228 181 LARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-- 257 (356)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-- 257 (356)
++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++|++||..... ...+........
T Consensus 162 ~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~~~ 237 (302)
T cd07864 162 LARLYNSEES---RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCGSP 237 (302)
T ss_pred ccccccCCcc---cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCC
Confidence 9976543221 11122345778999998865 3578899999999999999999999964221 111111111110
Q ss_pred -CCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 258 -PNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 258 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+.....+.......... ................+..+.+++.+||+.+|.+||++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMK-----PKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred Chhhcccccccccccccc-----cccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000000000000000 0000000000000123456789999999999999999999875
No 333
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.7e-33 Score=255.51 Aligned_cols=238 Identities=24% Similarity=0.271 Sum_probs=164.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
++|++.+.||+|++|.||+|.+..+++.||+|.+..... ...+.+.+|+.++++++||||+++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 579999999999999999999998899999999864322 234568889999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC-CCceEEcccccccccccCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN-DLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+|+.||.|||+++ ++|+||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~- 157 (294)
T PLN00009 82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV- 157 (294)
T ss_pred cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc-
Confidence 246789999999999998 999999999999985 5679999999997543221
Q ss_pred CCccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh-
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV- 268 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 268 (356)
.......++..|+|||++.+ ..++.++||||||+++|+|+||..||......+ .+...... .........+..
T Consensus 158 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~ 232 (294)
T PLN00009 158 ---RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFRI-LGTPNEETWPGVT 232 (294)
T ss_pred ---cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH-hCCCChhhccccc
Confidence 11223456889999998866 357889999999999999999999996432211 11111100 000000000000
Q ss_pred hcccccc-ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 269 LLNDNKV-LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 269 l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
-..+... ........... ........+.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLAT----VVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cchhhhhhcccCCCCCHHH----hCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 00000000000 00122345789999999999999999999986
No 334
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.4e-32 Score=245.08 Aligned_cols=209 Identities=22% Similarity=0.248 Sum_probs=166.2
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||.|+||.||++.+..+++.+|+|.+.... ......+..|+.+++.++|+||+++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4888999999999999999999899999999987542 2334567889999999999999987
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
+.++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 246778999999999999 999999999999999999999999999765432
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
......++..|++||.+.+..++.++|+||||+++|+|++|+.||...... .+.....
T Consensus 157 -----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~--------------- 214 (256)
T cd08530 157 -----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQ--------------- 214 (256)
T ss_pred -----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHh---------------
Confidence 112245678899999999888999999999999999999999999643211 1111100
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..... .........+.+++.+||+.+|++||++.++++
T Consensus 215 ~~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 215 RGKYP---------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred cCCCC---------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 001134456789999999999999999999986
No 335
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-32 Score=245.02 Aligned_cols=212 Identities=21% Similarity=0.263 Sum_probs=167.6
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH------------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------------ 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------------ 134 (356)
+|.+.+.||+|++|.||++.+..++..+++|++........+.+.+|+.+++.++|+|++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 47888999999999999999998889999999976655456788999999999999999876
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---- 153 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---- 153 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc----
Confidence 347889999999999998 99999999999999999999999999876543221
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
.....++..|++||.+.+..++.++|+||||+++|+|++|..||...... ....... ........
T Consensus 154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~------------~~~~~~~~ 218 (253)
T cd05122 154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KALFKIA------------TNGPPGLR 218 (253)
T ss_pred -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHH------------hcCCCCcC
Confidence 23456788999999998888999999999999999999999998642110 0000000 00000000
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
........+.+++.+||+.||.+|||+.++++
T Consensus 219 ----------------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 219 ----------------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ----------------cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00012346789999999999999999999985
No 336
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.3e-32 Score=252.68 Aligned_cols=209 Identities=19% Similarity=0.233 Sum_probs=163.5
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
...||+|+||.||+|....++..||+|.+..........+.+|+.+++.++|+||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 4579999999999999998999999999865544455678899999999999999987
Q ss_pred --------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCcc
Q 039228 135 --------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVR 200 (356)
Q Consensus 135 --------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 200 (356)
..++.+++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++....... .......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~----~~~~~~~ 177 (292)
T cd06657 105 TDIVTHTRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----PRRKSLV 177 (292)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc----ccccccc
Confidence 347889999999999999 9999999999999999999999999987543221 1123356
Q ss_pred ccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccc
Q 039228 201 RTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTN 280 (356)
Q Consensus 201 gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 280 (356)
++..|++||.+.+..++.++|+||||+++|+|++|..||..... ...........+.... .
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~--------~--------- 238 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPKLK--------N--------- 238 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcccC--------C---------
Confidence 78899999999888889999999999999999999999863211 1111111111111000 0
Q ss_pred cchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 281 SNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.......+.+++.+||+.+|.+||++.+|+.
T Consensus 239 -----------~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 239 -----------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred -----------cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 0022335678999999999999999999887
No 337
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1e-32 Score=250.86 Aligned_cols=213 Identities=22% Similarity=0.291 Sum_probs=164.5
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcC---CCChHHH--------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNIC---HRNLVRF-------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l-------------- 134 (356)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.++ |||++++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4788899999999999999999899999999987542 334567888999999987 9999976
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
+.++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06917 82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS--- 155 (277)
T ss_pred ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---
Confidence 457889999999999999 9999999999999999999999999997654322
Q ss_pred ccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......|+..|+|||.+.+ ..++.++|+||||+++|+|++|..||...... ......... ..+.+..
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~~~-----~~~~~~~ 224 (277)
T cd06917 156 -SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIPKS-----KPPRLED 224 (277)
T ss_pred -cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccccC-----CCCCCCc
Confidence 12233467889999998865 44688999999999999999999999643211 100000000 0000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
+ ..+..+.+++.+||+.||++||++.+++..
T Consensus 225 ~---------------------~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 225 N---------------------GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred c---------------------cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0 123457899999999999999999999863
No 338
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.4e-32 Score=251.45 Aligned_cols=216 Identities=20% Similarity=0.245 Sum_probs=169.1
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
..+.|++...||.|++|.||+|.+..++..|++|.+..... ..+.+..|+.+++.++|+|++++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 46679999999999999999999998889999999975544 45678899999999999999875
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 171 (286)
T cd06614 96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS- 171 (286)
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccchh-
Confidence 448889999999999998 99999999999999999999999999865432211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......++..|++||++.+..++.++|+||||+++|+|++|..||..... ...... +.......
T Consensus 172 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~----~~~~~~---------~~~~~~~~ 235 (286)
T cd06614 172 ---KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP----LRALFL---------ITTKGIPP 235 (286)
T ss_pred ---hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH----HHHHHH---------HHhcCCCC
Confidence 11234467889999999888899999999999999999999999863211 111000 00000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
. .....++..+.+++.+||+.+|.+||++.+|+..
T Consensus 236 ~-----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 236 L-----------------KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred C-----------------cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0 0001234567899999999999999999999863
No 339
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-32 Score=252.70 Aligned_cols=243 Identities=23% Similarity=0.298 Sum_probs=170.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHh--hcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALK--NICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l-------------- 134 (356)
.....+.++||+|.||.||+|... ++.||||+++. ...+.|.+|-+|.+ .++|+||++|
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 456778889999999999999987 69999999973 34567888877766 5789999998
Q ss_pred --------------------------HHHHHHHHHHHHHHhhc------CCCcEEecCCCCCCeEeCCCCceEEcccccc
Q 039228 135 --------------------------ISIAIDVASALDYLHHH------CQELILHCDPKPSNVLLDNDLFAHIGDFELA 182 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~------~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 182 (356)
.+++..+++||+|||+. .+++|+|||||+.|||+.+++++.|+|||+|
T Consensus 284 wLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 34788899999999974 2456999999999999999999999999999
Q ss_pred cccccCCCCCccCCCCccccccccchhhhcCCC-CC-----CccchHhHHHHHHHHHcCCCCCCccccC--CccHHHHHH
Q 039228 183 RFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE-VS-----TNGDAYNYGILLLEMVTRRKPIDFMFEG--DLNLHNFAR 254 (356)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDiwSlG~~l~elltg~~Pf~~~~~~--~~~~~~~~~ 254 (356)
..+...... .....-+||..|||||++.+.. +. .+.||||+|.++|||++.-.-+...... ...+..-+.
T Consensus 364 l~~~p~~~~--~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 364 LRLEPGKPQ--GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred EEecCCCCC--cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 988644332 2333478999999999997642 11 3579999999999999864433210000 111111111
Q ss_pred HhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 255 MAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
....+.++.+-.+.... ++.....|... ..+..|.+.+..||..||+.|-|+.=+.+.+.++...-
T Consensus 442 --~hPt~e~mq~~VV~kK~--RP~~p~~W~~h-------~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 442 --NHPTLEEMQELVVRKKQ--RPKIPDAWRKH-------AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred --CCCCHHHHHHHHHhhcc--CCCChhhhhcC-------ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 11222222221111110 11111112222 34556889999999999999999999999888876544
No 340
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.8e-32 Score=248.86 Aligned_cols=234 Identities=24% Similarity=0.245 Sum_probs=163.8
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhc---CCCChHHH--------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNI---CHRNLVRF-------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l-------------- 134 (356)
|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++++ +|||++++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778899999999999999998889999999974322 2234566788777665 59998876
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccc
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR 185 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 185 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcceec
Confidence 347789999999999999 999999999999999999999999999765
Q ss_pred ccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC-CCchHHH
Q 039228 186 QEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF-PNRVMDI 264 (356)
Q Consensus 186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~ 264 (356)
.... ......++..|+|||++.+..++.++|+|||||++|+|++|.+||...... ..+........ +......
T Consensus 158 ~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 158 SFEM-----ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred cCCc-----ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcC
Confidence 3321 112234688899999999989999999999999999999999998743221 11111111111 1000000
Q ss_pred hhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 265 VNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
........ ....................+.+++.+||+.||.+||++.+++.
T Consensus 232 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 232 RNVSLPRS------SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCcccchh------hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000 00000000001111234456789999999999999999999874
No 341
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-33 Score=245.99 Aligned_cols=164 Identities=25% Similarity=0.324 Sum_probs=143.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
-++|..+++||+|.||.|.+++.+.+++.+|+|++++.-- .....-+.|-++|+..+||.+..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4679999999999999999999999999999999986532 333456779999999999999877
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..+-.+|+.||.|||+++ ||+||||.+|+|+|.+|++||+|||+++..-..
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~-- 321 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY-- 321 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccc--
Confidence 225568999999999998 999999999999999999999999999853222
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
......++||+.|+|||++....|+.++|.|.+||++|||++|+.||..
T Consensus 322 --g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 322 --GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred --cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 2345569999999999999999999999999999999999999999974
No 342
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-33 Score=266.84 Aligned_cols=241 Identities=20% Similarity=0.216 Sum_probs=173.2
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccchHHHHHHHHHHhhcCCCChHHH------------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGASKSFMAECKALKNICHRNLVRF------------------ 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l------------------ 134 (356)
+...+.||+|+||.||+|+++.+|+.||||.++... ....+...+|+++|++++|+|||++
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 556678999999999999999999999999997543 3456778899999999999999998
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC--CCC--ceEEcccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLD--NDL--FAHIGDFELA 182 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~--~~~--~~kl~Dfg~a 182 (356)
+.++.++..||.|||+++ ||||||||.||++. .+| ..||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 558889999999999999 99999999999994 323 5699999999
Q ss_pred cccccCCCCCccCCCCccccccccchhhhc-CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC---C
Q 039228 183 RFRQEVSNPTQSSSNGVRRTIGYTALDYDL-GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF---P 258 (356)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~---~ 258 (356)
+.+++.. ....++||..|.+||... ...|+..+|.|||||++|++.||..||-..... .+..+...... +
T Consensus 172 rel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p-k~~~~~~~~~~tkkp 245 (732)
T KOG4250|consen 172 RELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP-KNNKEIMWHIITKKP 245 (732)
T ss_pred ccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc-cccchhhhhhhccCC
Confidence 9776533 456689999999999998 488999999999999999999999999643222 11111111111 1
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC--ChHHHHHHHHHhhh
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM--NVPNAVHDLQSVNN 329 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP--s~~~vl~~L~~i~~ 329 (356)
....-..++...+... +...+.- .-...+.....+-..+..++..+|.+|. ...+....+..|..
T Consensus 246 ~~v~i~~~~~eNgpv~----~s~~lP~--p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 246 SGVAIGAQEEENGPVE----WSSTLPQ--PNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred CceeEeeecccCCcee----eeccCCC--cccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 1111111111111100 0000000 0011112333455667777888999999 88888888887764
No 343
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=6.7e-32 Score=250.15 Aligned_cols=234 Identities=15% Similarity=0.171 Sum_probs=155.2
Q ss_pred CceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH---------------------------
Q 039228 84 SFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF--------------------------- 134 (356)
Q Consensus 84 ~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l--------------------------- 134 (356)
++|.||.++...+++.||||++... .....+.+..|+.+++.++|+||+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 4455666666667899999998754 33455688999999999999999997
Q ss_pred ------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC---CccCCCCc
Q 039228 135 ------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP---TQSSSNGV 199 (356)
Q Consensus 135 ------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~ 199 (356)
..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||.+......... ........
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~ 168 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSS 168 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccc
Confidence 337789999999999999 999999999999999999999999998754322110 11122334
Q ss_pred cccccccchhhhcC--CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchH----HHhhhhhcccc
Q 039228 200 RRTIGYTALDYDLG--SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVM----DIVNLVLLNDN 273 (356)
Q Consensus 200 ~gt~~y~aPE~~~~--~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~ 273 (356)
.++..|+|||++.. ..++.++|+|||||++|||++|..||....... ...+......+..+. ......+....
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
T cd08216 169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKVRGTVPCLLDKSTYPLYEDSMSQSR 247 (314)
T ss_pred cccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCccccccCchhhhcCCcCccc
Confidence 56778999999876 357899999999999999999999997532211 111111111110000 00000000000
Q ss_pred ccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 274 KVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
. ......................+.+++.+||+.||++|||++++++.
T Consensus 248 ~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 248 S--SNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred c--cccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0 00000000000011112334567899999999999999999999874
No 344
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.2e-32 Score=243.96 Aligned_cols=212 Identities=20% Similarity=0.319 Sum_probs=167.9
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|.+.+.||.|+||.||++.+..++..||+|.+..... ...+.+..|+++++.++|||++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 48888999999999999999998899999999875433 455678899999999999999986
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 347789999999999998 9999999999999999999999999997654322
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
.......+++.|+|||...+..++.++|+||+|+++|+|++|..||.... ............ .
T Consensus 158 ----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~--------~ 220 (258)
T cd08215 158 ----DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQ--------Y 220 (258)
T ss_pred ----ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCC--------C
Confidence 12233567889999999988889999999999999999999999986422 111111110000 0
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
. .. +......+.+++.+||..+|++|||+.++++.
T Consensus 221 ~-~~------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 221 P-PI------------------PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred C-CC------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00 00223457899999999999999999999863
No 345
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.8e-32 Score=253.63 Aligned_cols=212 Identities=25% Similarity=0.319 Sum_probs=163.1
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
+.|...+.||.|+||.||+|++..++..||+|.+... .......+.+|+.+++.++|+|++++
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3477788999999999999999988999999998643 22334567889999999999999886
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~---- 167 (308)
T cd06634 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 167 (308)
T ss_pred EccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecC----
Confidence 346788999999999998 99999999999999999999999999875432
Q ss_pred CccCCCCccccccccchhhhc---CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 192 TQSSSNGVRRTIGYTALDYDL---GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
.....++..|+|||.+. ...++.++|||||||++|+|++|..||....... ..........+ .
T Consensus 168 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~---------~ 233 (308)
T cd06634 168 ----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESP---------A 233 (308)
T ss_pred ----cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhhcCCC---------C
Confidence 12345788999999974 3567889999999999999999999986421110 00001000000 0
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
.. .......+.+++.+||+.+|++||++.+|+..--
T Consensus 234 ~~---------------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 234 LQ---------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred cC---------------------cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 00 0123345789999999999999999999987643
No 346
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.4e-32 Score=256.66 Aligned_cols=249 Identities=16% Similarity=0.204 Sum_probs=161.7
Q ss_pred ccceec--CceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-------------------
Q 039228 78 NLIGVG--SFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l------------------- 134 (356)
..||+| +||+||+|.+..+++.||+|++.... ....+.+.+|+.+++.++||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 99999999999899999999987542 2234678889999999999999975
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC--
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT-- 192 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-- 192 (356)
..++.|++.||+|||+.+ |+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 247889999999999999 9999999999999999999999998654322111100
Q ss_pred -ccCCCCccccccccchhhhcCC--CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC--------CCch
Q 039228 193 -QSSSNGVRRTIGYTALDYDLGS--EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF--------PNRV 261 (356)
Q Consensus 193 -~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~--------~~~~ 261 (356)
........++..|+|||++.+. .++.++|||||||++|+|++|..||.................+ +...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 0111122345679999998763 4789999999999999999999999754321111000000000 0000
Q ss_pred HHHhhhh------hccccccccccccchh-hhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH--HHHHhhhh
Q 039228 262 MDIVNLV------LLNDNKVLAGTNSNML-RKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH--DLQSVNNI 330 (356)
Q Consensus 262 ~~~~~~~------l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~--~L~~i~~~ 330 (356)
..+.+.. +...... ......+. ..........+...+.+|+.+||+.||++|||+.++++ .+..+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVA-AGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhccchhhhhcccccchhc-cccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 0000000 0000000 00000000 00011112346667899999999999999999999974 34444443
No 347
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=8.6e-32 Score=245.05 Aligned_cols=234 Identities=23% Similarity=0.247 Sum_probs=166.2
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
|+..+.||+|++|.||+|....+++.||+|.+.... ....+.+..|+.+++.++|+|++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999999989999999997653 3345678889999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.||.|||+.+ |+|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---- 153 (282)
T cd07829 81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR---- 153 (282)
T ss_pred CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc----
Confidence 347788999999999999 99999999999999999999999999976543221
Q ss_pred CCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC--chHHHhhhh--h
Q 039228 195 SSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN--RVMDIVNLV--L 269 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--l 269 (356)
......++..|+|||.+.+. .++.++||||||+++|||++|..||...... ..+.......... ......... .
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCcHHHHHhhcccccc
Confidence 12223456789999998766 7889999999999999999999998643211 1111111111000 000000000 0
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..... .......... .......+.+++.+||..||++||++.+|+.
T Consensus 233 ~~~~~---~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 233 KPTFP---KFPPKDLEKV----LPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccc---ccCccchHHh----cccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000 0000000001 1122456899999999999999999999975
No 348
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.2e-32 Score=244.90 Aligned_cols=215 Identities=21% Similarity=0.264 Sum_probs=169.0
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|.+.+.||+|++|.||+|.+..++..|++|.+..... ...+.+.+|+.++++++||||+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 47788999999999999999998899999999875542 445778899999999999999986
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 447889999999999998 999999999999999999999999999866443211
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......++..|++||.+.+...+.++||||||+++|+|++|..||.... ........ +.......
T Consensus 158 --~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~--------~~~~~~~~ 223 (260)
T cd06606 158 --EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYK--------IGSSGEPP 223 (260)
T ss_pred --ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHh--------ccccCCCc
Confidence 11234567889999999988889999999999999999999999997533 11111000 00000000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
. ........+.+++.+|++.+|++||++.+++.
T Consensus 224 ~------------------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 224 E------------------IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred C------------------CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0 01123456889999999999999999999985
No 349
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.1e-32 Score=251.82 Aligned_cols=208 Identities=25% Similarity=0.308 Sum_probs=160.5
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
|...+.||+|+||.||+|++..++..|++|.+..... .....+..|+.+++.++|||++++
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 6667789999999999999998999999999874322 233567889999999999999986
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~------- 172 (313)
T cd06633 103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSS------- 172 (313)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccC-------
Confidence 347789999999999999 9999999999999999999999999985321
Q ss_pred cCCCCccccccccchhhhc---CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 194 SSSNGVRRTIGYTALDYDL---GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
......++..|+|||++. ...++.++||||||+++|+|++|..||....... ..........+. ..
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~~---------~~ 241 (313)
T cd06633 173 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNDSPT---------LQ 241 (313)
T ss_pred -CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCC---------CC
Confidence 122356788999999974 4568889999999999999999999986432110 000000000000 00
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.......+.+++.+||+.+|.+||++.+++..
T Consensus 242 ---------------------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 ---------------------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ---------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00122357789999999999999999999864
No 350
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.8e-32 Score=245.57 Aligned_cols=212 Identities=19% Similarity=0.230 Sum_probs=160.9
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
||.|+||.||+|++..+++.|++|.+..... ...+.+.+|+.++++++||||+++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999998899999999865433 345678899999999999999987
Q ss_pred ---------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC----CccC
Q 039228 135 ---------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP----TQSS 195 (356)
Q Consensus 135 ---------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----~~~~ 195 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 347889999999999999 999999999999999999999999998754322110 0112
Q ss_pred CCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccc
Q 039228 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKV 275 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (356)
.....++..|++||.......+.++|+||||+++|++++|..||..... ..... .........
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~------------~~~~~~~~~ 220 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQ------------NILNGKIEW 220 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHH------------HHhcCCcCC
Confidence 2335577889999999888889999999999999999999999964321 11111 000000000
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHH
Q 039228 276 LAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQ 325 (356)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~ 325 (356)
+ ........+.+++.+||+.+|.+|||+.++.+.|+
T Consensus 221 -------------~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 221 -------------P-EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -------------C-ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 00011346789999999999999999966665553
No 351
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.4e-33 Score=262.12 Aligned_cols=212 Identities=21% Similarity=0.238 Sum_probs=170.8
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc--chHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG--ASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
....|.+...||+|.|+.|.+|++..++..||||++.+..-. ....+.+|+++|..++|||||++
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 457799999999999999999999999999999999765433 23458899999999999999998
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
-.++.|++.|++|||.++ |||||||++||||+.+.++||+|||++.++...
T Consensus 134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~-- 208 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDYG-- 208 (596)
T ss_pred EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeeccc--
Confidence 237889999999999999 999999999999999999999999999987643
Q ss_pred CCccCCCCccccccccchhhhcCCCC-CCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEV-STNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
......+|++.|.|||++.+..| ++.+|+||+|+++|-|+.|..||++..-. . +-+..+
T Consensus 209 ---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-----~------------Lr~rvl 268 (596)
T KOG0586|consen 209 ---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-----E------------LRPRVL 268 (596)
T ss_pred ---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc-----c------------ccchhe
Confidence 33445889999999999998876 58899999999999999999999843211 1 111111
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+.+. ++.-....+.+++.+.+-.+|.+|++++++.+
T Consensus 269 ~gk~r----------------Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 269 RGKYR----------------IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eeeec----------------ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 11111 01112224568899999999999999998865
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.7e-32 Score=253.67 Aligned_cols=244 Identities=18% Similarity=0.179 Sum_probs=164.2
Q ss_pred cCCCC-ccccceecCceEEEEEEECCCCeEEEEEEeeccCccc--------------hHHHHHHHHHHhhcCCCChHHH-
Q 039228 71 TDGFP-LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA--------------SKSFMAECKALKNICHRNLVRF- 134 (356)
Q Consensus 71 ~~~~~-~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l- 134 (356)
.++|. +.+.||.|+||.||+|.+..+++.||||.+....... ...+.+|+.+++.++|+||+++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 34565 4577999999999999999889999999986432211 1257789999999999999886
Q ss_pred -----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccc
Q 039228 135 -----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDF 179 (356)
Q Consensus 135 -----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 179 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCc
Confidence 447889999999999999 999999999999999999999999
Q ss_pred ccccccccCCC----------CCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCcc
Q 039228 180 ELARFRQEVSN----------PTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLN 248 (356)
Q Consensus 180 g~a~~~~~~~~----------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~ 248 (356)
|++........ ..........++..|+|||++.+. .++.++|+|||||++|+|++|..||......+ .
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~ 242 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID-Q 242 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 99976541110 001112233467889999998764 46889999999999999999999997432211 1
Q ss_pred HHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 249 LHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+..............+-...............+ .............+.+++.+||+.+|++||++.+++.
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 243 LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKP----KDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHhCCCchhhCcchhhcccccccCcCCc----ccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 111111000000000000000000000000000 0000001123456789999999999999999999986
No 353
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=5e-32 Score=242.51 Aligned_cols=211 Identities=26% Similarity=0.302 Sum_probs=167.0
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc--cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
+|++.+.||+|++|.||+|.+..+++.|++|.+..... .....+.+|++++++++|||++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 47889999999999999999998889999999975543 345678999999999999999876
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 154 (254)
T cd06627 81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--- 154 (254)
T ss_pred CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc---
Confidence 457889999999999999 99999999999999999999999999986643321
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDN 273 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 273 (356)
......++..|+|||...+..++.++|+||+|+++|+|++|..||.... ......... .... ...
T Consensus 155 -~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~~~~~---------~~~~-~~~ 219 (254)
T cd06627 155 -DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAALFRIV---------QDDH-PPL 219 (254)
T ss_pred -cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHh---------ccCC-CCC
Confidence 1233567889999999988888999999999999999999999986322 111111000 0000 000
Q ss_pred ccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 274 KVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.......+.+++.+||..+|++|||+.+++.
T Consensus 220 ------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 ------------------PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ------------------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0123346789999999999999999999874
No 354
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-33 Score=256.13 Aligned_cols=211 Identities=21% Similarity=0.231 Sum_probs=165.7
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
-+.|..-++||+||||.||-+....||+.+|.|.+.+.. .......++|-.+|.+++.+.||.+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 356888999999999999999999999999999986432 2233456789999999999999976
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
+.++.+|+.||.+||+.+ ||+|||||+|||+|+.|+++|+|+|+|..+...
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 558899999999999999 999999999999999999999999999876543
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV 268 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (356)
. .....+||.+|||||++.++.|+...|.|||||++|||+.|+.||....+.. . .+-+|..
T Consensus 341 ~-----~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-k-------------~eEvdrr 401 (591)
T KOG0986|consen 341 K-----PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-K-------------REEVDRR 401 (591)
T ss_pred C-----ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-h-------------HHHHHHH
Confidence 3 2233589999999999999999999999999999999999999996432211 0 0112222
Q ss_pred hccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH
Q 039228 269 LLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP 318 (356)
Q Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 318 (356)
...+... -+....++..++....|..||.+|-...
T Consensus 402 ~~~~~~e---------------y~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 402 TLEDPEE---------------YSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred Hhcchhh---------------cccccCHHHHHHHHHHHccCHHHhccCC
Confidence 2211110 0013334567788888999999997543
No 355
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=1.6e-31 Score=243.69 Aligned_cols=237 Identities=22% Similarity=0.221 Sum_probs=162.7
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc-chHHHHHHHHHHhhcC-CCChHHH-----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG-ASKSFMAECKALKNIC-HRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l----------------- 134 (356)
|++.+.||+|+||.||+|....+++.|+||.+...... ......+|+..+++++ |+||+++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 67788999999999999999888899999998654322 2234567999999999 9999988
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~---- 153 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP---- 153 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC----
Confidence 336778999999999999 9999999999999999999999999997553321
Q ss_pred cCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh-hcc
Q 039228 194 SSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV-LLN 271 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 271 (356)
......++..|+|||++.+ ..++.++|+||||+++++|++|++||......+ .........-+.....+.+.. +..
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHHHhcCCCChhhhhhHhhhhc
Confidence 1223457888999998754 457899999999999999999999986432211 111111100000000000000 000
Q ss_pred ccc-cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNK-VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
... .............. ......+.+++.+||+.+|++|||+.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLI----PNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccccHHHHc----ccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000 00000000000000 0113467899999999999999999998753
No 356
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=6.5e-34 Score=243.89 Aligned_cols=219 Identities=22% Similarity=0.262 Sum_probs=161.8
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHh-hcCCCChHHHHHHH-----------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALK-NICHRNLVRFISIA----------- 138 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~-~l~h~niv~l~~i~----------- 138 (356)
++.+-+..||.|+||+|++-.++.+|+..|||.+..... ...++++.|.+... .-+.||||++++.+
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 445567789999999999999999999999999976544 45678889988654 45689999994421
Q ss_pred ------------------------------HHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 139 ------------------------------IDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 139 ------------------------------~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
.-.+.||.||-..- .|||||+||+|||++..|.+||+|||.+..+...
T Consensus 144 LMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 144 LMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS 221 (361)
T ss_pred HHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence 12568999998743 4999999999999999999999999999765432
Q ss_pred CCCCccCCCCccccccccchhhhcC--CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLG--SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
...+.-.|-..|||||.+.. ..|+.+||+||||++|||+.||..|+.....- + +-+-
T Consensus 222 -----iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv---f-------------eql~ 280 (361)
T KOG1006|consen 222 -----IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV---F-------------EQLC 280 (361)
T ss_pred -----HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH---H-------------HHHH
Confidence 22334567788999998863 35899999999999999999999998743221 1 1111
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
....++++. ++. .....+....+..++..|+-.|-.+||...++.++
T Consensus 281 ~Vv~gdpp~-------l~~---~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 281 QVVIGDPPI-------LLF---DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHcCCCCe-------ecC---cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 111111110 000 00112345578899999999999999999998764
No 357
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.98 E-value=4.6e-32 Score=247.38 Aligned_cols=206 Identities=21% Similarity=0.235 Sum_probs=150.8
Q ss_pred cceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHH---hhcCCCChHHH------------------
Q 039228 79 LIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKAL---KNICHRNLVRF------------------ 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l---~~l~h~niv~l------------------ 134 (356)
.||+|+||.||++.+..+++.||+|.+..... .....+..|..++ ...+||||+.+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999998899999999864322 1122334444433 34478998764
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...... .
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~------~ 151 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK------K 151 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceecccc------C
Confidence 457889999999999999 999999999999999999999999998644321 1
Q ss_pred CCCccccccccchhhhc-CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 196 SNGVRRTIGYTALDYDL-GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
.....|+..|+|||.+. +..++.++|+|||||++|+|++|..||........ ......... ....+
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~------~~~~~----- 218 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT------VNVEL----- 218 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHHhhc------CCcCC-----
Confidence 12346789999999986 45688999999999999999999999974332211 111110000 00000
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVHD 323 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~~ 323 (356)
+......+.+++.+||+.||.+|| +++++++.
T Consensus 219 -----------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 219 -----------------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -----------------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 012344678999999999999999 58888764
No 358
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=6.4e-32 Score=243.67 Aligned_cols=206 Identities=21% Similarity=0.218 Sum_probs=159.2
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
||.|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999999889999999987542 2334678899999999999999987
Q ss_pred ---------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCc
Q 039228 135 ---------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199 (356)
Q Consensus 135 ---------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 199 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-----~~~~~ 152 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-----KTWTF 152 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----ccccc
Confidence 347789999999999998 9999999999999999999999999997654321 12234
Q ss_pred cccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccccc
Q 039228 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGT 279 (356)
Q Consensus 200 ~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 279 (356)
.++..|++||.+.+..++.++|+||||+++|+|++|..||.....+. ...... +.........
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~--------~~~~~~~~~~------ 215 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYND--------ILKGNGKLEF------ 215 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHH--------HhccCCCCCC------
Confidence 57888999999988889999999999999999999999997543211 111110 0100000000
Q ss_pred ccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC-----hHHHHH
Q 039228 280 NSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN-----VPNAVH 322 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~~vl~ 322 (356)
+......+.+++.+||+.+|++||+ +.++++
T Consensus 216 ------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 216 ------------PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ------------CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 0122446789999999999999999 555554
No 359
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=7e-32 Score=245.22 Aligned_cols=215 Identities=25% Similarity=0.310 Sum_probs=167.0
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcC-CCChHHH-------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNIC-HRNLVRF------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l------------- 134 (356)
++|.+.+.||+|+||.||+|....+++.||+|++.... ......+..|+.++++++ ||||+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46899999999999999999999899999999986532 233456788999999999 9999988
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 447889999999999999 99999999999999999999999999986543221
Q ss_pred CC----------------ccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHH
Q 039228 191 PT----------------QSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254 (356)
Q Consensus 191 ~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~ 254 (356)
.. ........++..|+|||......++.++|+||||++++++++|..||..... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~-- 231 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE----YLTF-- 231 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH----HHHH--
Confidence 10 1223345678899999999888899999999999999999999999974321 1000
Q ss_pred HhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCCh----HHHHH
Q 039228 255 MAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNV----PNAVH 322 (356)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~~vl~ 322 (356)
..+..... .. .......+.+++.+||+.+|.+||++ .+++.
T Consensus 232 -------~~~~~~~~--~~------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 232 -------QKILKLEY--SF------------------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -------HHHHhcCC--CC------------------CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 00000000 00 00223457899999999999999999 66654
No 360
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-34 Score=250.05 Aligned_cols=212 Identities=21% Similarity=0.293 Sum_probs=171.0
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHHH-----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI----------------- 135 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~----------------- 135 (356)
-|.++++||+|+||.||+|.++.+|+.+|||.+... .+.++++.|+.+|++.+.|++|+++
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 377889999999999999999999999999998754 3468899999999999999999983
Q ss_pred ---------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 136 ---------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 136 ---------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
.++.+.+.||+|||... -||||||..|||++.+|..||+|||.|..+.. +..
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD----TMA 184 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD----TMA 184 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhh----hHH
Confidence 26778899999999887 89999999999999999999999999976543 234
Q ss_pred CCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 195 SSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
..+.+.||+.|||||++..-.|+.++||||||++..||..|++||...-.-. .. ..+|.+. .+.
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR----AI--FMIPT~P--------PPT-- 248 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR----AI--FMIPTKP--------PPT-- 248 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc----ee--EeccCCC--------CCC--
Confidence 4567899999999999999999999999999999999999999996422110 00 0011100 000
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
...++.-...+-+++..||-.+|++|-|+.++++.
T Consensus 249 --------------F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 --------------FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred --------------CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 01122344467789999999999999999998864
No 361
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.98 E-value=7.5e-32 Score=245.49 Aligned_cols=203 Identities=23% Similarity=0.232 Sum_probs=154.2
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
||+|+||+||+|.+..+++.||+|.+.... ......+..|+.+++.++||||+++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999999899999999986432 2233456789999999999999987
Q ss_pred -----------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCC
Q 039228 135 -----------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSN 197 (356)
Q Consensus 135 -----------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 197 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-----~~~~ 152 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-----KKIK 152 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC-----Cccc
Confidence 346789999999999999 999999999999999999999999998765321 1122
Q ss_pred CccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccc
Q 039228 198 GVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLA 277 (356)
Q Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 277 (356)
...++..|++||++.+..++.++||||||+++|+|++|+.||....... ............ ....
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~----------~~~~---- 217 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTLEM----------AVEY---- 217 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhccccc----------cccC----
Confidence 3456788999999988889999999999999999999999996432211 111111100000 0000
Q ss_pred ccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHH
Q 039228 278 GTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPN 319 (356)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~ 319 (356)
.......+.+++.+||+.||.+||++.+
T Consensus 218 --------------~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 218 --------------PDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred --------------CccCCHHHHHHHHHHccCChhHccCCCc
Confidence 0022335689999999999999994444
No 362
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=2.5e-33 Score=259.69 Aligned_cols=158 Identities=27% Similarity=0.383 Sum_probs=139.1
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH--------------------
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF-------------------- 134 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l-------------------- 134 (356)
.++||+|.||+||-|.++.+|+.||||++.+.. ......+.+|+.+|+++.||.||.+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 358999999999999999999999999997543 3445678999999999999999986
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC---CceEEcccccccccccCCCCCc
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND---LFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.||+.||.|||.++ |+|+||||+|||+.+. -.+||+|||+|+++++.
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk----- 720 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK----- 720 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchh-----
Confidence 236779999999999999 9999999999999643 36899999999987653
Q ss_pred cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
.....++||+.|+|||++.+..|...-|+||.||++|.-++|..||++.
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 3445689999999999999999999999999999999999999999753
No 363
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=259.54 Aligned_cols=220 Identities=22% Similarity=0.353 Sum_probs=176.8
Q ss_pred CCccccceecCceEEEEEEECCC----CeEEEEEEeecc-CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLN----RAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.+..++||+|+||+||+|.+-.. +.+||+|++... ......+++.|+-+|.+++|||++++
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq 777 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQ 777 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHH
Confidence 45567899999999999998543 357899998643 34456789999999999999999998
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
+.|+.||++|+.|||.+. +|||||...|||+.....+||.|||+++.+......
T Consensus 778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 458899999999999998 999999999999999999999999999987654432
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLL 270 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (356)
.. .....-.+-|||-|.+....|+.++|||||||++||++| |..|+++...++ +.+++....
T Consensus 855 y~--~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------------I~dlle~ge- 917 (1177)
T KOG1025|consen 855 YS--APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------------IPDLLEKGE- 917 (1177)
T ss_pred cc--ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------------hhHHHhccc-
Confidence 21 122233567999999999999999999999999999999 999987654322 112221111
Q ss_pred cccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhh
Q 039228 271 NDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNI 330 (356)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~ 330 (356)
....++.|...+.-++.+||..|++.||+++++...+.+....
T Consensus 918 -----------------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 918 -----------------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred -----------------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 1223447888999999999999999999999999998887654
No 364
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4.7e-33 Score=237.02 Aligned_cols=169 Identities=27% Similarity=0.353 Sum_probs=142.8
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeec--cCccchHHHHHHHHHHhhcCCCChHHHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSI--QCQGASKSFMAECKALKNICHRNLVRFIS------------ 136 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~------------ 136 (356)
.+.|.-..+||+|.||.||+|+.+.+++.||+|++-. +........++|+++|..|+|+|++.++.
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 3457778899999999999999999999999987632 23344456789999999999999998733
Q ss_pred ---------------------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 137 ---------------------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 137 ---------------------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
+..++..||.|+|... |+|||+||.|+||+.+|.+||+|||+++
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccccc
Confidence 4556899999999998 9999999999999999999999999998
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
.+....+.........+-|+.|.+||.+.+. .|+++.|||.-||++.||+||.+-+.+.
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgn 232 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGN 232 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCC
Confidence 7766555444445556679999999998874 6899999999999999999999988653
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=3.2e-31 Score=242.64 Aligned_cols=220 Identities=20% Similarity=0.183 Sum_probs=164.0
Q ss_pred CCCccccceecCceEEEEEEEC---CCCeEEEEEEeeccC----ccchHHHHHHHHHHhhc-CCCChHHH----------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFD---LNRAVVAIKVLSIQC----QGASKSFMAECKALKNI-CHRNLVRF---------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l---------- 134 (356)
+|++.+.||+|+||.||++... .++..||||.+.... ....+.+..|+.++.++ +||||+++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4788899999999999999864 356889999986432 22345678899999999 59999987
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 336779999999999998 99999999999999999999999999876533
Q ss_pred CCCCCccCCCCccccccccchhhhcCCC--CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSE--VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
.. ........++..|++||...+.. .+.++|+||||+++|+|++|..||...... ..........
T Consensus 158 ~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~--------- 224 (288)
T cd05583 158 EE---EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEISRRI--------- 224 (288)
T ss_pred cc---ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHHHHH---------
Confidence 21 11122345788999999987655 778999999999999999999998632111 1111111110
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
...... ........+.+++.+||+.||++|||+.++.+.|+..
T Consensus 225 ---~~~~~~----------------~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 225 ---LKSKPP----------------FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ---HccCCC----------------CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 000000 0012334578899999999999999999888877553
No 366
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=6.4e-31 Score=236.86 Aligned_cols=210 Identities=20% Similarity=0.197 Sum_probs=159.0
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-----ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-----QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
+|.+.+.||+|+||.||++.+..++..+++|+++... ......+..|+.+++.++||||+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4888999999999999999998776777777765321 2233456789999999999999987
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
..++.+++.||.|||+.+ ++|+||+|+||++++ +.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 236678999999999999 999999999999985 569999999987653
Q ss_pred cCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
... .......++..|+|||...+..++.++|+||||+++|+|++|..||.... .........
T Consensus 157 ~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~~--------- 218 (260)
T cd08222 157 GSC----DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRIV--------- 218 (260)
T ss_pred CCc----ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHH---------
Confidence 321 12223557888999999988888999999999999999999999986321 111111100
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..... .........+.+++.+||..+|++||++.++++
T Consensus 219 ---~~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 219 ---EGPTP---------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---cCCCC---------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 00000 001134456789999999999999999999986
No 367
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=3.6e-31 Score=239.93 Aligned_cols=211 Identities=18% Similarity=0.174 Sum_probs=157.2
Q ss_pred HHhhcCCCCccccc--eecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhh-cCCCChHHH---------
Q 039228 67 LLKATDGFPLINLI--GVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKN-ICHRNLVRF--------- 134 (356)
Q Consensus 67 ~~~~~~~~~~~~~l--g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l--------- 134 (356)
.....++|.+.+.+ |+|+||.||++....++..+|+|.+........ |+..... .+||||+++
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~ 83 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKG 83 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCe
Confidence 33445677777776 999999999999999999999999874422211 2222221 269999876
Q ss_pred ----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC-ceEEccccccccc
Q 039228 135 ----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL-FAHIGDFELARFR 185 (356)
Q Consensus 135 ----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~ 185 (356)
..++.|++.||.|||+.+ ++||||+|+||+++.++ .++|+|||++...
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 458899999999999999 99999999999999888 9999999998754
Q ss_pred ccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 186 QEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
... ....++..|+|||++.+..++.++||||||+++|+|++|..||............+.... ..
T Consensus 161 ~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~------ 225 (267)
T PHA03390 161 GTP--------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK------ 225 (267)
T ss_pred CCC--------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc------
Confidence 321 124578899999999988899999999999999999999999974433322222221111 00
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCC-hHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMN-VPNAVH 322 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~~vl~ 322 (356)
.. . ........+.+++.+||+.+|.+||+ ++++++
T Consensus 226 --~~----~----------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 --KL----P----------------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred --cC----C----------------cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 0 00123345789999999999999996 688874
No 368
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=2.1e-31 Score=240.01 Aligned_cols=207 Identities=19% Similarity=0.155 Sum_probs=153.5
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccCcc---chHHHHHHHHH-HhhcCCCChHHH-------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG---ASKSFMAECKA-LKNICHRNLVRF------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~-l~~l~h~niv~l------------------- 134 (356)
+.||.|+||.||+|....+++.||+|.+...... ....+..|..+ ....+|+|++++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999999999888999999998644221 12234455444 445689999987
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCC
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSS 196 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 196 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..... .
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--------~ 150 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE--------N 150 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc--------c
Confidence 347889999999999998 99999999999999999999999999874322 2
Q ss_pred CCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccc
Q 039228 197 NGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVL 276 (356)
Q Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 276 (356)
....++..|++||.+.+..++.++||||||+++|+|++|..||..... ....... ...... ..
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~--------~~~~~~-~~--- 213 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFDNI--------LSRRIN-WP--- 213 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHH--------HhcccC-CC---
Confidence 234578889999999888889999999999999999999999964221 1111000 000000 00
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 277 AGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
......+...+.+++.+||+.+|++||++.++.+.|
T Consensus 214 ------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 214 ------------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ------------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 000012345678999999999999999887665544
No 369
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=5e-31 Score=240.39 Aligned_cols=205 Identities=19% Similarity=0.207 Sum_probs=150.8
Q ss_pred cceecCceEEEEEEECCCCeEEEEEEeeccCcc---chHHHHHHH---HHHhhcCCCChHHH------------------
Q 039228 79 LIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG---ASKSFMAEC---KALKNICHRNLVRF------------------ 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~---~~l~~l~h~niv~l------------------ 134 (356)
.||+|+||.||+|.+..+++.||+|.+...... ....+..|. ..++...||||+++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999988999999998654221 112233443 34455679999865
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...... .
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~------~ 151 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK------K 151 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCcc------C
Confidence 447889999999999999 999999999999999999999999998754321 1
Q ss_pred CCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccc
Q 039228 196 SNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNK 274 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 274 (356)
.....|+..|+|||++.++ .++.++||||+|+++|+|++|+.||........ ......... ....+.
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~------~~~~~~---- 219 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT------MAVELP---- 219 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHhhc------cCCCCC----
Confidence 1234678999999998754 688999999999999999999999975322111 110000000 000000
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHH
Q 039228 275 VLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVH 322 (356)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~ 322 (356)
......+.+++.+|+..+|.+|| ++.++++
T Consensus 220 ------------------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 220 ------------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ------------------CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 01234678999999999999999 8888875
No 370
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=217.10 Aligned_cols=239 Identities=21% Similarity=0.223 Sum_probs=166.5
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.|...++||+|.||+||+|+...+++.||+|.+.... .......++|+-+|+.++|.|||++
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4666789999999999999999999999999987543 3345678999999999999999998
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCc
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ 193 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 193 (356)
..++.|+++||.|+|+++ +.|||+||.|.||+.+|++||+|||+++.++...
T Consensus 83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv---- 155 (292)
T KOG0662|consen 83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---- 155 (292)
T ss_pred hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce----
Confidence 236678999999999999 9999999999999999999999999998765322
Q ss_pred cCCCCccccccccchhhhcCCC-CCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 194 SSSNGVRRTIGYTALDYDLGSE-VSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
......+-|..|.+|.++.+.+ |++..|+||-||++.|+.. |++.|.+.. -+..+....+..-...-.++-.-.-.+
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d-vddqlkrif~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-VDDQLKRIFRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc-HHHHHHHHHHHhCCCccccCCccccCC
Confidence 2333456699999999998755 8889999999999999988 566565432 222333333332211111111111111
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
++..-+.. +. .-.|.+..+.....=.+++.+.+.-+|..|.+++..++
T Consensus 235 dyk~yp~y-pa--ttswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 235 DYKPYPIY-PA--TTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCcccCCc-cc--cchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 11100000 00 00011111222223346777777889999999988765
No 371
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=6.3e-31 Score=240.90 Aligned_cols=215 Identities=22% Similarity=0.249 Sum_probs=158.4
Q ss_pred CCCccccceecCceEEEEEEEC---CCCeEEEEEEeeccC----ccchHHHHHHHHHHhhc-CCCChHHH----------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFD---LNRAVVAIKVLSIQC----QGASKSFMAECKALKNI-CHRNLVRF---------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l---------- 134 (356)
+|++.+.||.|+||.||.|... .++..||+|++.... ....+.+..|+.++.++ +|+||+++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4788999999999999999874 367899999987432 22345678899999999 58999987
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 235668999999999999 99999999999999999999999999976533
Q ss_pred CCCCCccCCCCccccccccchhhhcCC--CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGS--EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
.. ........|+..|+|||.+.+. .++.++||||||+++|+|++|..||...... ........
T Consensus 158 ~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~----------- 222 (290)
T cd05613 158 DE---VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISR----------- 222 (290)
T ss_pred cc---ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHH-----------
Confidence 21 1122235678899999998753 4678899999999999999999998632111 11111111
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCC-----ChHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRM-----NVPNAVH 322 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~~vl~ 322 (356)
..+..... .+......+.+++.+||+.||++|| ++.+++.
T Consensus 223 -~~~~~~~~----------------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 223 -RILKSEPP----------------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -HhhccCCC----------------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11110000 0002233568999999999999998 5555543
No 372
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=254.94 Aligned_cols=206 Identities=21% Similarity=0.191 Sum_probs=163.0
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhh-cCCCChHHH--------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKN-ICHRNLVRF-------------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l-------------- 134 (356)
.++.|.+...+|.|+|+.|-.+.+..+++..++|++..... ...+|+.++.. -+||||+++
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 36778999999999999999999999999999999975522 22346655444 469999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe-CCCCceEEcccccccccccCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL-DNDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..|+.+|+.|+.|||.+| +|||||||+|||+ ++.++++|+|||.++.....
T Consensus 396 e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--- 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--- 469 (612)
T ss_pred hhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh---
Confidence 248899999999999999 9999999999999 69999999999999865433
Q ss_pred CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 192 TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
....+-|..|.|||++....|+.++|+||||++||+|++|+.||.....+ ..+.. ....+...
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~---~i~~~~~s--------- 532 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHT---RIQMPKFS--------- 532 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHH---hhcCCccc---------
Confidence 22345588899999999999999999999999999999999999754433 11111 11111111
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
........+|+.+||+.||.+||+|.++...
T Consensus 533 ---------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 533 ---------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ---------------------cccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 1333456799999999999999999998753
No 373
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=7.7e-32 Score=234.65 Aligned_cols=215 Identities=18% Similarity=0.160 Sum_probs=163.6
Q ss_pred hcCCCCcc-ccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhc-CCCChHHH-------------
Q 039228 70 ATDGFPLI-NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNI-CHRNLVRF------------- 134 (356)
Q Consensus 70 ~~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l------------- 134 (356)
.+++|.+. ++||-|-.|.|-.+..+.|++.+|+|++.. .....+|+++.-.. .|||||.+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 46778764 579999999999999999999999999752 24566788876665 49999987
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC---CCCceEEccccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLD---NDLFAHIGDFEL 181 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~ 181 (356)
-.|..||+.|+.|||+.+ |.||||||+|+|.. .+..+||+|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccccc
Confidence 348889999999999999 99999999999996 456799999999
Q ss_pred ccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCch
Q 039228 182 ARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRV 261 (356)
Q Consensus 182 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 261 (356)
|+..... ......+-|+.|.|||++...+|+...|+||+||++|-|++|.+||-..-. ..+..-.+..+
T Consensus 211 AK~t~~~-----~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg--~aispgMk~rI---- 279 (400)
T KOG0604|consen 211 AKETQEP-----GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--LAISPGMKRRI---- 279 (400)
T ss_pred ccccCCC-----ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC--ccCChhHHhHh----
Confidence 9865432 223346679999999999999999999999999999999999999964322 11111111000
Q ss_pred HHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 262 MDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 262 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..+.+. +-+++| .+..+...++|...|+.+|.+|.|+.+++.
T Consensus 280 -------~~gqy~--------FP~pEW----s~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 280 -------RTGQYE--------FPEPEW----SCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred -------hccCcc--------CCChhH----hHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 001100 111111 155566788999999999999999999875
No 374
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=4.1e-30 Score=229.83 Aligned_cols=200 Identities=25% Similarity=0.233 Sum_probs=156.7
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
||.|+||.||++....+++.+|+|.+..... .....+..|+.+++.++||||+++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6999999999999988889999999875432 234578899999999999999997
Q ss_pred ---------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCc
Q 039228 135 ---------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGV 199 (356)
Q Consensus 135 ---------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 199 (356)
..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~~~ 153 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----SRTNTF 153 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC----CcccCC
Confidence 347788999999999998 9999999999999999999999999997653321 122345
Q ss_pred cccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcccccccccc
Q 039228 200 RRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGT 279 (356)
Q Consensus 200 ~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 279 (356)
.++..|++||...+...+.++|+||||+++|++++|..||..... ....... ....+ ..
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~--------~~~~~--~~------ 212 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKI--------LKDPL--RF------ 212 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHH--------hcCCC--CC------
Confidence 678899999999888889999999999999999999999964221 1111110 00000 00
Q ss_pred ccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHH
Q 039228 280 NSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPN 319 (356)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~ 319 (356)
+......+.+++.+||..||++||++.+
T Consensus 213 ------------~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 213 ------------PEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ------------CCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 0022346789999999999999999954
No 375
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=263.75 Aligned_cols=170 Identities=24% Similarity=0.289 Sum_probs=147.5
Q ss_pred HHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeec---cCccchHHHHHHHHHHhhcCCCChHHH-------
Q 039228 65 ESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSI---QCQGASKSFMAECKALKNICHRNLVRF------- 134 (356)
Q Consensus 65 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l------- 134 (356)
.++....++|.++++||+|+||.|.+++.+.+++.||+|++++ .......-|..|-.+|..-+.+-|+.+
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 4555667899999999999999999999999999999999986 234445678889999998888888877
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
..++.+|+.||.-||+.| +|||||||+|||||..|++||+|||.+..
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHHh
Confidence 236778999999999999 99999999999999999999999999987
Q ss_pred cccCCCCCccCCCCccccccccchhhhc----C-CCCCCccchHhHHHHHHHHHcCCCCCC
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDL----G-SEVSTNGDAYNYGILLLEMVTRRKPID 240 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDiwSlG~~l~elltg~~Pf~ 240 (356)
+...+ .......+|||.|.+||++. + +.|+..+|+||+||++|||+.|..||.
T Consensus 225 m~~dG---~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 225 MDADG---TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred cCCCC---cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 76544 34455688999999999985 3 568999999999999999999999995
No 376
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.9e-30 Score=255.86 Aligned_cols=233 Identities=19% Similarity=0.127 Sum_probs=143.8
Q ss_pred hcCCCCccccceecCceEEEEEEECCC----CeEEEEEEeeccCccch---HHHHHH-----H-----------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLN----RAVVAIKVLSIQCQGAS---KSFMAE-----C----------------- 120 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~---~~~~~E-----~----------------- 120 (356)
..++|.+.+.||+|+||.||+|++..+ +..||+|.+........ ..+... .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence 567899999999999999999999988 89999998753221110 000000 0
Q ss_pred --------------HHHhhcCCCChH--------------------HHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCCe
Q 039228 121 --------------KALKNICHRNLV--------------------RFISIAIDVASALDYLHHHCQELILHCDPKPSNV 166 (356)
Q Consensus 121 --------------~~l~~l~h~niv--------------------~l~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NI 166 (356)
..+..-.++..+ .+..++.|++.||.|||+.+ |+||||||+||
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLKP~NI 286 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVKPQNI 286 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCCHHHE
Confidence 000000011000 01357889999999999999 99999999999
Q ss_pred EeCC-CCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCC----------------------CCCCccchH
Q 039228 167 LLDN-DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS----------------------EVSTNGDAY 223 (356)
Q Consensus 167 ll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~sDiw 223 (356)
|++. ++.+||+|||+++.+..... .......+++.|+|||.+... .++.++|||
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~~---~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGIN---YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred EEeCCCCcEEEEeCCCccccccccc---cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9985 68999999999986543221 223346788999999965432 233456999
Q ss_pred hHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC--CCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHH
Q 039228 224 NYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF--PNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVR 301 (356)
Q Consensus 224 SlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 301 (356)
||||++|||+++..|++. ....+..... ......+.... ..... ...... ............+
T Consensus 364 SlGviL~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~-~~~~~------~~~~~~--~~~~d~~~~~~~d 428 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLV-EPRAS------PDLRRG--FEVLDLDGGAGWE 428 (566)
T ss_pred HHHHHHHHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhh-ccccc------hhhhhh--hhhccccchHHHH
Confidence 999999999997776532 1111111110 00111110000 00000 000000 0000001123458
Q ss_pred HHHhhcCCCcCCCCChHHHHHH
Q 039228 302 IGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 302 l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
|+.+||+.||.+|||+.++++.
T Consensus 429 Li~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 429 LLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHccCCcccCCCHHHHhCC
Confidence 9999999999999999999873
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.5e-30 Score=261.99 Aligned_cols=110 Identities=33% Similarity=0.470 Sum_probs=98.1
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH-------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------- 134 (356)
.++|.+.+.||+|+||.||+|.+..+++.||||++.... ......+..|+.++..++||||+++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 467999999999999999999999999999999987432 2233578889999999999999986
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
+.++.||+.||.|||..+ ||||||||+|||++.++.++|+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 457889999999999998 9999999999999999999999999986
No 378
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-31 Score=243.69 Aligned_cols=164 Identities=25% Similarity=0.309 Sum_probs=143.4
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhcCCCChHHHHH----------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNICHRNLVRFIS---------- 136 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~---------- 136 (356)
...+++++..||-||||.|-++..+.....+|+|++++. .....+.+..|-.+|...+.|.||+++.
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 445788888999999999999998876666899988643 4555677899999999999999999833
Q ss_pred ---------------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 137 ---------------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 137 ---------------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
++..++.|++|||.++ ||+|||||+|+++|.+|.+||.|||+|+.+....
T Consensus 498 LmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 498 LMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 4455889999999999 9999999999999999999999999999876543
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
..-.++||+.|.|||++.+...+.++|.||||+++|||++|.+||..
T Consensus 575 -----KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~ 621 (732)
T KOG0614|consen 575 -----KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSG 621 (732)
T ss_pred -----ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 23358999999999999999999999999999999999999999974
No 379
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.5e-30 Score=218.85 Aligned_cols=241 Identities=19% Similarity=0.244 Sum_probs=171.7
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CCChHHHHH------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLVRFIS------------ 136 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~------------ 136 (356)
..++|++.+.+|+|.+++||.|....+++.++||+++.. ..+.+.+|+.+|+.|. ||||+++++
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 357899999999999999999999888999999999733 3567889999999998 999999833
Q ss_pred ------------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC-CCceEEcccccccccccCCCC
Q 039228 137 ------------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDN-DLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 137 ------------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
++.+++.||.|+|+.| |+|||+||.|++||. .-.++|+|+|+|.+......
T Consensus 113 iFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e- 188 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE- 188 (338)
T ss_pred HhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCCCce-
Confidence 5668999999999999 999999999999994 56799999999987654332
Q ss_pred CccCCCCccccccccchhhhcC-CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhh--
Q 039228 192 TQSSSNGVRRTIGYTALDYDLG-SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLV-- 268 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 268 (356)
-+..+.+..|..||.+.. ..|+..-|+|||||++..|+..+.||....++...+...+.-.-.+.+...+...
T Consensus 189 ----YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 189 ----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred ----eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 223445677889998865 5578889999999999999999999965444444444444333333333322211
Q ss_pred -hcccccccc--ccccchhhhhchhhHHH-HHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 269 -LLNDNKVLA--GTNSNMLRKTKMNSRLE-CLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 269 -l~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+.+.+...- ..-..|. .......+. ...+.++++.+.|..|-.+|+|+.|.+.
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~-~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWS-RFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred CCChhHhhHhhccccccHH-HhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 111110000 0000000 000001111 1235678999999999999999999875
No 380
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-30 Score=234.21 Aligned_cols=165 Identities=25% Similarity=0.301 Sum_probs=138.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcC-CCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNIC-HRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l------------ 134 (356)
..+|..+.+||+|+||.|.+|..+.+.+.+|||++++.- ..+.+--..|-++|.-.. -|.++++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 456999999999999999999999999999999997542 222333445666666553 5677766
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
..++.+|+.||-+||++| ||+||||.+|||+|.+|++||+|||+++.--.
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~-- 502 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIF-- 502 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccccc--
Confidence 347788999999999999 99999999999999999999999999974221
Q ss_pred CCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
.......++||+.|+|||++...+|+..+|.|||||+||||+.|++||++.
T Consensus 503 --~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 503 --DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred --CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 123445689999999999999999999999999999999999999999854
No 381
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-30 Score=224.54 Aligned_cols=249 Identities=17% Similarity=0.192 Sum_probs=173.7
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CCChHHHHH--------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLVRFIS-------------------- 136 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~-------------------- 136 (356)
+.||+|+|+.|-.++...++..||||++.+.......++.+|+.++.+.+ |+||++++.
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 57999999999999999999999999998887777889999999999886 999999833
Q ss_pred -----------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC---ceEEcccccccccccCCC---CCc
Q 039228 137 -----------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL---FAHIGDFELARFRQEVSN---PTQ 193 (356)
Q Consensus 137 -----------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~~---~~~ 193 (356)
+..+|+.||.|||.+| |.||||||+|||..... -+||+||.+..-...... ..+
T Consensus 164 LshI~~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spast 240 (463)
T KOG0607|consen 164 LSHIQKRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAST 240 (463)
T ss_pred HHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCC
Confidence 6778999999999999 99999999999996544 479999988754322211 223
Q ss_pred cCCCCccccccccchhhhc-----CCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCch-HHHhhh
Q 039228 194 SSSNGVRRTIGYTALDYDL-----GSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRV-MDIVNL 267 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 267 (356)
......+|+..|||||+.. ...|+.+.|.|||||++|-|+.|.+||.+....+..+.+- ..-..- ..+...
T Consensus 241 P~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrG---e~Cr~CQ~~LFes 317 (463)
T KOG0607|consen 241 PELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRG---EVCRVCQNKLFES 317 (463)
T ss_pred ccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCC---CccHHHHHHHHHH
Confidence 3345577889999999763 2358899999999999999999999998876654332110 000000 001111
Q ss_pred hhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH--HHHHhh--hhhccccccccCCcC
Q 039228 268 VLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH--DLQSVN--NILLPETVFKSLTNN 343 (356)
Q Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~--~L~~i~--~~~~~~~~~~~~~~~ 343 (356)
.-.+.++ +-++.|. ....+-.+++...+..++.+|-++.+++. ....+. ..++.+..+...+++
T Consensus 318 IQEGkYe--------FPdkdWa----hIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ekalptp~v~~r~~s~ 385 (463)
T KOG0607|consen 318 IQEGKYE--------FPDKDWA----HISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKALPTPQVLQRNSST 385 (463)
T ss_pred HhccCCc--------CChhhhH----HhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhccCCCCcccccCccc
Confidence 1111111 1122222 22334456777778899999999998887 223322 334555554444443
Q ss_pred C
Q 039228 344 R 344 (356)
Q Consensus 344 ~ 344 (356)
+
T Consensus 386 ~ 386 (463)
T KOG0607|consen 386 M 386 (463)
T ss_pred h
Confidence 3
No 382
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-29 Score=253.85 Aligned_cols=228 Identities=23% Similarity=0.312 Sum_probs=173.1
Q ss_pred HHHhhcCCCCccccceecCceEEEEEEECC-------CCeEEEEEEeeccCc-cchHHHHHHHHHHhhcC-CCChHHH--
Q 039228 66 SLLKATDGFPLINLIGVGSFDAVYQGVFDL-------NRAVVAIKVLSIQCQ-GASKSFMAECKALKNIC-HRNLVRF-- 134 (356)
Q Consensus 66 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l-- 134 (356)
.++...++..+.+.||.|.||.|++|.... ....||||.++.... ...+.+..|+.+|+.+. |+||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 344455666777899999999999998531 146899999874433 45577899999999985 9999987
Q ss_pred ---------------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCC
Q 039228 135 ---------------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKP 163 (356)
Q Consensus 135 ---------------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp 163 (356)
+.++.||+.|++||++.. +|||||..
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhh
Confidence 347789999999999988 99999999
Q ss_pred CCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCcc
Q 039228 164 SNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFM 242 (356)
Q Consensus 164 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~ 242 (356)
.|||+..+..+||+|||+|+................ -...|||||.+....|+.++|||||||+||||+| |..||.+.
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 999999999999999999985433222111111111 2455999999999999999999999999999999 88998642
Q ss_pred ccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 243 FEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.. ..++.++ +..... +..+..|..++.++|..||+.+|++||++.++.+
T Consensus 526 ~~-~~~l~~~------------l~~G~r------------------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 526 PP-TEELLEF------------LKEGNR------------------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred Cc-HHHHHHH------------HhcCCC------------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 10 1111111 111111 1223367778899999999999999999999999
Q ss_pred HHHHhh
Q 039228 323 DLQSVN 328 (356)
Q Consensus 323 ~L~~i~ 328 (356)
.++...
T Consensus 575 ~~~~~l 580 (609)
T KOG0200|consen 575 FFEKHL 580 (609)
T ss_pred HHHHHH
Confidence 999954
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=233.15 Aligned_cols=239 Identities=20% Similarity=0.222 Sum_probs=166.9
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCC--CC----hHHH---------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICH--RN----LVRF--------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~n----iv~l--------- 134 (356)
.+++|.+...+|+|.||.|-.+.+..++..||||+++... ...+...-|+++|+++.+ |+ +|++
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 4788999999999999999999999999999999987432 233556679999999842 21 1111
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC---------------
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN--------------- 170 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~--------------- 170 (356)
..++.|++.+++|||+.+ ++|-||||+|||+-+
T Consensus 166 iCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 166 ICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred eEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccce
Confidence 347889999999999999 999999999999932
Q ss_pred -----CCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccC
Q 039228 171 -----DLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEG 245 (356)
Q Consensus 171 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~ 245 (356)
+..++|+|||.|.+-.+.. ...+.|..|.|||++.+-+++..+||||+||||+|+.||...|....
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~h-------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe-- 313 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEHH-------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE-- 313 (415)
T ss_pred eccCCCcceEEEecCCcceeccCc-------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC--
Confidence 3358999999998654322 34677999999999999999999999999999999999999987532
Q ss_pred CccHHHHHHH---hCCCchHHHh------hhh-hc--cccccc---cc-cccchhhhhchhhHHHHHHHHHHHHHhhcCC
Q 039228 246 DLNLHNFARM---AFPNRVMDIV------NLV-LL--NDNKVL---AG-TNSNMLRKTKMNSRLECLIFMVRIGAACSMG 309 (356)
Q Consensus 246 ~~~~~~~~~~---~~~~~~~~~~------~~~-l~--~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~ 309 (356)
+.....+.+. .+|..+..-. ... +. .....+ +. ....-+.. .+.....+...|.+|+.++|..
T Consensus 314 n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~-~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 314 NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKK-YMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHH-HhccCcHHHhHHHHHHHHHHcc
Confidence 2221122222 2222111111 000 00 000000 00 00001111 1122235566799999999999
Q ss_pred CcCCCCChHHHHH
Q 039228 310 SSQDRMNVPNAVH 322 (356)
Q Consensus 310 dP~~RPs~~~vl~ 322 (356)
||.+|+|+.|++.
T Consensus 393 DP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 393 DPARRITLREALS 405 (415)
T ss_pred CccccccHHHHhc
Confidence 9999999999875
No 384
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.8e-30 Score=221.63 Aligned_cols=163 Identities=25% Similarity=0.338 Sum_probs=137.5
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHHHH--------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRFIS-------------- 136 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~-------------- 136 (356)
+.+--+.||-|+||.||.+.+..+|+.||+|.+... +-...+++.+|+++|..++|.|++..++
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 455567899999999999999999999999998633 2334578999999999999999998733
Q ss_pred ---------------------------HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 137 ---------------------------IAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 137 ---------------------------i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
++.||++||.|||+.+ |+||||||.|.|++++..+||+|||+++.-+...
T Consensus 134 V~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 134 VLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhh
Confidence 5678999999999999 9999999999999999999999999998543322
Q ss_pred CCCccCCCCccccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 190 NPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.......+-|..|.|||.++|. .|+.+.||||.||++.|++..+..|..
T Consensus 211 ---~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 211 ---RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred ---hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 1222335568899999999885 589999999999999999999888863
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=6.5e-29 Score=219.90 Aligned_cols=202 Identities=26% Similarity=0.271 Sum_probs=157.8
Q ss_pred CceEEEEEEECCCCeEEEEEEeeccCccc-hHHHHHHHHHHhhcCCCChHHH----------------------------
Q 039228 84 SFDAVYQGVFDLNRAVVAIKVLSIQCQGA-SKSFMAECKALKNICHRNLVRF---------------------------- 134 (356)
Q Consensus 84 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l---------------------------- 134 (356)
+||.||+|.+..+++.+|+|++....... .+.+.+|+..+++++|+|++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999999888999999997654444 6789999999999999999987
Q ss_pred ---------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccc
Q 039228 135 ---------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGY 205 (356)
Q Consensus 135 ---------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y 205 (356)
+.++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... ......++..|
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~~~~ 152 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----LLTTFVGTPEY 152 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc-----ccccccCCcCC
Confidence 347788999999999998 9999999999999999999999999998654321 22335568889
Q ss_pred cchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhh
Q 039228 206 TALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLR 285 (356)
Q Consensus 206 ~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 285 (356)
++||...+..++.++|+||||+++++|++|..||....... ........ .......
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-~~~~~~~~------------~~~~~~~----------- 208 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-ELFKKIGK------------PKPPFPP----------- 208 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHhc------------cCCCCcc-----------
Confidence 99999988889999999999999999999999986421111 11111100 0000000
Q ss_pred hhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 286 KTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 286 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
........+.+++.+||..+|++||++.++++
T Consensus 209 -----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 209 -----PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred -----ccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 00003346789999999999999999999986
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5e-31 Score=240.16 Aligned_cols=225 Identities=21% Similarity=0.278 Sum_probs=167.9
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-------ccchHHHHHHHHHHhhcCCCChHHH--------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-------QGASKSFMAECKALKNICHRNLVRF-------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l-------- 134 (356)
..++|-++..||+|||+.||+|.+...++.||+|+-.... ....+...+|.++.+.|+||.||++
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3457889999999999999999998888999999975332 1223456789999999999999997
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC---CCCceEEccccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLD---NDLFAHIGDFEL 181 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~ 181 (356)
..|+.||+.||.||.+.. +||||-||||.|||+- ..|.+||+|||+
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecch
Confidence 348899999999999984 7899999999999994 568999999999
Q ss_pred ccccccCCCC---CccCCCCccccccccchhhhcCC----CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHH
Q 039228 182 ARFRQEVSNP---TQSSSNGVRRTIGYTALDYDLGS----EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254 (356)
Q Consensus 182 a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~ 254 (356)
+++++..... .........||.+|++||.+.-+ .++.++||||+||++|.++.|+.||....... ....
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ----dILq 695 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ----DILQ 695 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH----HHHh
Confidence 9998665432 23345667899999999988643 47889999999999999999999996432211 1111
Q ss_pred HhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 255 MAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.. .++...-...+. -+....+...+|.+||++.-++|.+..++..
T Consensus 696 eN------TIlkAtEVqFP~-----------------KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 696 EN------TILKATEVQFPP-----------------KPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hh------chhcceeccCCC-----------------CCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 10 011110000000 0122224468999999999999998777653
No 387
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=2.4e-29 Score=223.95 Aligned_cols=184 Identities=20% Similarity=0.164 Sum_probs=140.7
Q ss_pred cCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------------------
Q 039228 83 GSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------------------- 134 (356)
Q Consensus 83 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------------------- 134 (356)
|.+|.||++.+..+++.||+|.+.... .+..|...+....||||+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999999999999999987542 23345555556679999987
Q ss_pred ---------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccc
Q 039228 135 ---------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGY 205 (356)
Q Consensus 135 ---------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y 205 (356)
..++.|++.||.|||+.+ |+||||||+||+++.++.++++|||.+...... .....++..|
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-------~~~~~~~~~y 148 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-------CDGEAVENMY 148 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc-------cccCCcCccc
Confidence 347789999999999999 999999999999999999999999987654321 1123446779
Q ss_pred cchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhh
Q 039228 206 TALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLR 285 (356)
Q Consensus 206 ~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 285 (356)
+|||...+..++.++|+||+|+++|||++|..|+........ ......+.
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------~~~~~~~~--------------- 198 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------THTTLNIP--------------- 198 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------cccccCCc---------------
Confidence 999999888899999999999999999999988753211000 00000000
Q ss_pred hhchhhHHHHHHHHHHHHHhhcCCCcCCCCChH
Q 039228 286 KTKMNSRLECLIFMVRIGAACSMGSSQDRMNVP 318 (356)
Q Consensus 286 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ 318 (356)
......+.+++.+|++.||++||++.
T Consensus 199 -------~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 199 -------EWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred -------ccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 01223567899999999999999973
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=7.7e-30 Score=211.56 Aligned_cols=181 Identities=22% Similarity=0.276 Sum_probs=142.9
Q ss_pred HHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc-CccchHHHHHHHHHHhh-cCCCChHHHH---------
Q 039228 67 LLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-CQGASKSFMAECKALKN-ICHRNLVRFI--------- 135 (356)
Q Consensus 67 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~-l~h~niv~l~--------- 135 (356)
+....++..-+..||+|++|.|-+-++..+|+..|+|.+... .....+++++|+++..+ ...|.+|+++
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 334455667778899999999999999999999999999744 23445678889887554 5689999872
Q ss_pred -------------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 136 -------------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 136 -------------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
.|+..+..||.|||++- .+||||+||+||||+.+|.+|++|||.+-.
T Consensus 121 wIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 121 WICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred EEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccccee
Confidence 26778999999999953 599999999999999999999999999987
Q ss_pred cccCCCCCccCCCCccccccccchhhhcC----CCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHH
Q 039228 185 RQEVSNPTQSSSNGVRRTIGYTALDYDLG----SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFAR 254 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~ 254 (356)
+...- ..+.-.|-..|||||.+.. ..|+.++||||||+++.||.+++.||+........+.+.+.
T Consensus 199 L~dSi-----Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 199 LVDSI-----AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred ehhhh-----HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 64322 1222345678999998753 36899999999999999999999999876555444444443
No 389
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-29 Score=220.67 Aligned_cols=166 Identities=23% Similarity=0.321 Sum_probs=142.5
Q ss_pred hhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc---CccchHHHHHHHHHHhhc-CCCChHHH----------
Q 039228 69 KATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---CQGASKSFMAECKALKNI-CHRNLVRF---------- 134 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l---------- 134 (356)
...++|.++.+||+|+|..|.+++++.|.+.+|+|+++++ ..++......|-.+..+. +||.+|-+
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl 326 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL 326 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence 3567899999999999999999999999999999999754 334455666777766654 68998876
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
..+..+|..||.|||++| ||+||||.+|+|+|..|++||+|+|.++..-.
T Consensus 327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCC
Confidence 235567999999999999 99999999999999999999999999985322
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
. ......++||+.|.|||.+.+..|+..+|.|+|||+++||+.|+.||+-
T Consensus 404 ~----gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 404 P----GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred C----CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 2 2344568999999999999999999999999999999999999999974
No 390
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=227.97 Aligned_cols=231 Identities=20% Similarity=0.289 Sum_probs=179.0
Q ss_pred HHHHhhcCCCCccccceecCceEEEEEEECCC-----CeEEEEEEeecc-CccchHHHHHHHHHHhhcCCCChHHH----
Q 039228 65 ESLLKATDGFPLINLIGVGSFDAVYQGVFDLN-----RAVVAIKVLSIQ-CQGASKSFMAECKALKNICHRNLVRF---- 134 (356)
Q Consensus 65 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l---- 134 (356)
.++.....+++....+-+|.||.||.|.+.+. .+.|-+|.++.. +......++.|.-.+..+.|||+.++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 45555667788889999999999999987643 244566666533 23345678899999999999999986
Q ss_pred ------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC
Q 039228 135 ------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL 172 (356)
Q Consensus 135 ------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~ 172 (356)
..++.|++.|++|||+++ +||.||...|++||+..
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhhe
Confidence 347789999999999999 99999999999999999
Q ss_pred ceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHH
Q 039228 173 FAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHN 251 (356)
Q Consensus 173 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~ 251 (356)
.+||+|=.+++-+....-. ......-.+..||+||.+.+..|+.++|+|||||++|||+| |+.|+.+.. -.+
T Consensus 434 qVkltDsaLSRDLFP~DYh--cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID-----PfE 506 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYH--CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID-----PFE 506 (563)
T ss_pred eEEeccchhccccCccccc--ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC-----HHH
Confidence 9999999999865433221 11122233667999999999999999999999999999999 999986432 112
Q ss_pred HHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 252 FARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
+......+ ....++.+|+.+|..+|.-||...|++||+++|++..|.+...++
T Consensus 507 m~~ylkdG---------------------------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 507 MEHYLKDG---------------------------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred HHHHHhcc---------------------------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 11111111 012233489999999999999999999999999999999987766
Q ss_pred c
Q 039228 332 L 332 (356)
Q Consensus 332 ~ 332 (356)
.
T Consensus 560 t 560 (563)
T KOG1024|consen 560 T 560 (563)
T ss_pred h
Confidence 4
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-30 Score=249.60 Aligned_cols=208 Identities=25% Similarity=0.293 Sum_probs=159.4
Q ss_pred CCccccceecCce-EEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CCChHHH-----------------
Q 039228 74 FPLINLIGVGSFD-AVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l----------------- 134 (356)
|.-.+++|.|..| .||+|... ++.||||++-. +...-..+|+..|+.-+ |||||++
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC--CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 4445678999887 57999987 78999999753 23345678999998775 9999997
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC---C--CceEEcccccccccc
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN---D--LFAHIGDFELARFRQ 186 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~--~~~kl~Dfg~a~~~~ 186 (356)
+.+..|++.||++||+.+ ||||||||.||||+. + ..++|+|||+++.+.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 346788999999999998 999999999999975 2 578999999999887
Q ss_pred cCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcC-CCCCCccccCCccHHHHHHHhCCCchHHHh
Q 039228 187 EVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDLNLHNFARMAFPNRVMDIV 265 (356)
Q Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (356)
........ ..+..||-+|+|||.+....-+.++||||+||++|+.++| ..||......+.++..-.. .+.
T Consensus 663 ~~~sS~~r-~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~-----~L~--- 733 (903)
T KOG1027|consen 663 GGKSSFSR-LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNY-----TLV--- 733 (903)
T ss_pred CCcchhhc-ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcc-----cee---
Confidence 66544333 5678899999999999998888899999999999999995 9999754333222111000 000
Q ss_pred hhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 266 NLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.+... .++ +..+||.+|++.+|..||++.+|+.
T Consensus 734 --~L~~~--------------------~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 --HLEPL--------------------PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred --eeccC--------------------chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00000 122 4578999999999999999999973
No 392
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=2.6e-28 Score=226.19 Aligned_cols=243 Identities=20% Similarity=0.194 Sum_probs=174.7
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCC------CChHHH---------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICH------RNLVRF--------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l--------- 134 (356)
...+|.+....|+|-|++|..|.+...|+.||||++..... ..+.=+.|+.+|++|+. -|+++|
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 45679999999999999999999998899999999975432 23455678888888842 245554
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC-CceEEccccccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND-LFAHIGDFELAR 183 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~a~ 183 (356)
..++.|+..||..|-..+ |+|.||||+|||+++. ..+||||||.|.
T Consensus 509 LClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 509 LCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred eEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCcccc
Confidence 237889999999999999 9999999999999864 567999999997
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCc-cHHHHHHHhCCCch-
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDL-NLHNFARMAFPNRV- 261 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~~- 261 (356)
+..... ...+.-+..|.|||++.|-+|+...|+||.||+|||+.||+..|.+.....+ .+.--+...+|..+
T Consensus 586 ~~~ene------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 586 FASENE------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred cccccc------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 654322 2224456779999999999999999999999999999999999987554332 12222222333322
Q ss_pred --HHHhhhhhccccccccc---------------------cccchhhh--hchhhHHHHHHHHHHHHHhhcCCCcCCCCC
Q 039228 262 --MDIVNLVLLNDNKVLAG---------------------TNSNMLRK--TKMNSRLECLIFMVRIGAACSMGSSQDRMN 316 (356)
Q Consensus 262 --~~~~~~~l~~~~~~~~~---------------------~~~~~~~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs 316 (356)
.+++|..+-.++...+. .....+.. ..+.+.....+.|.+|+..|+..||++|.|
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 12333333222111000 01111111 123445577889999999999999999999
Q ss_pred hHHHHH
Q 039228 317 VPNAVH 322 (356)
Q Consensus 317 ~~~vl~ 322 (356)
..+.|+
T Consensus 740 ~nqAL~ 745 (752)
T KOG0670|consen 740 VNQALK 745 (752)
T ss_pred HHHHhc
Confidence 998875
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=2.8e-27 Score=229.65 Aligned_cols=165 Identities=24% Similarity=0.296 Sum_probs=119.8
Q ss_pred hcCCCCccccceecCceEEEEEEEC----------------CCCeEEEEEEeeccCccchHHH--------------HHH
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFD----------------LNRAVVAIKVLSIQCQGASKSF--------------MAE 119 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~----------------~~~~~vavK~~~~~~~~~~~~~--------------~~E 119 (356)
..++|.+.++||+|+||.||+|... ..++.||||.+........+.| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4578999999999999999999752 2346799999865433222222 345
Q ss_pred HHHHhhcCCCCh-----HH-------------------------------------------------------------
Q 039228 120 CKALKNICHRNL-----VR------------------------------------------------------------- 133 (356)
Q Consensus 120 ~~~l~~l~h~ni-----v~------------------------------------------------------------- 133 (356)
+.++.+++|.++ ++
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 666666655543 11
Q ss_pred --------HHHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccc
Q 039228 134 --------FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGY 205 (356)
Q Consensus 134 --------l~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y 205 (356)
+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||++........ .......+++.|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---~~~~~g~~tp~Y 376 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---FNPLYGMLDPRY 376 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc---cCccccCCCcce
Confidence 1236778999999999998 99999999999999999999999999975432211 111123347899
Q ss_pred cchhhhcCCCC----------------------CCccchHhHHHHHHHHHcCCC-CCC
Q 039228 206 TALDYDLGSEV----------------------STNGDAYNYGILLLEMVTRRK-PID 240 (356)
Q Consensus 206 ~aPE~~~~~~~----------------------~~~sDiwSlG~~l~elltg~~-Pf~ 240 (356)
+|||.+..... ..+.||||+||++|+|++|.. ||.
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 99998754321 124699999999999999875 664
No 394
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-27 Score=232.94 Aligned_cols=221 Identities=21% Similarity=0.269 Sum_probs=173.7
Q ss_pred HHHHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CCChHHH--------
Q 039228 64 YESLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLVRF-------- 134 (356)
Q Consensus 64 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l-------- 134 (356)
+..+...++-|++.+.||.|.+|.||+++...+++.+|+|+....... .+++..|..+|+.+. |||++.+
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 344455677899999999999999999999999999999998755433 467788999998875 8999987
Q ss_pred ------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcc
Q 039228 135 ------------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGD 178 (356)
Q Consensus 135 ------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 178 (356)
..|+.+++.||.+||++. ++|||||-.|||++.++.+||.|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEee
Confidence 347889999999999998 99999999999999999999999
Q ss_pred cccccccccCCCCCccCCCCccccccccchhhhcCC-----CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHH
Q 039228 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGS-----EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFA 253 (356)
Q Consensus 179 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~ 253 (356)
||++..++.. ....+...||+.|||||++... .|+..+|+||||++..||.-|.+|+..+-. ...+.
T Consensus 167 FGvSaQldsT----~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP----mraLF 238 (953)
T KOG0587|consen 167 FGVSAQLDST----VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP----MRALF 238 (953)
T ss_pred eeeeeeeecc----cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch----hhhhc
Confidence 9999876533 3455668899999999998643 477889999999999999999999864321 11111
Q ss_pred HHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 254 RMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.++.+. .+. ...+..-.+.+.++|..||..|-+.||++.++++
T Consensus 239 --~IpRNP----PPk--------------------Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 239 --LIPRNP----PPK--------------------LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred --cCCCCC----Ccc--------------------ccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 111100 000 0111244557789999999999999999998875
No 395
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.1e-27 Score=217.73 Aligned_cols=95 Identities=33% Similarity=0.495 Sum_probs=80.5
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-----CC---ChHHH--------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-----HR---NLVRF-------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~---niv~l-------- 134 (356)
.++|.+.++||.|.|++||+|.+..+.+.||+|+.+.. ....+..+.||++|++++ |+ .||+|
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 36899999999999999999999999999999998633 344567788999999884 32 45655
Q ss_pred ----------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEe
Q 039228 135 ----------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLL 168 (356)
Q Consensus 135 ----------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll 168 (356)
..|+.||+.||.|||..+ .|||-||||+|||+
T Consensus 156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 348999999999999976 49999999999999
No 396
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-27 Score=209.91 Aligned_cols=238 Identities=20% Similarity=0.181 Sum_probs=169.6
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
..+|.-+..+|.|.- .|-.|.+.-.++.||+|.+... .....++..+|..++..++|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 446777888999988 7888888888899999987533 23445778899999999999999987
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 188 (356)
-.++.|++.|+.|||+.| |+||||||+||++..++.+||.|||+|+.-+..
T Consensus 95 e~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 95 EVYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hHHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcccCcc
Confidence 237889999999999999 999999999999999999999999999754321
Q ss_pred CCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHH---hC-CC-chHH
Q 039228 189 SNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARM---AF-PN-RVMD 263 (356)
Q Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~---~~-~~-~~~~ 263 (356)
...+..+.|..|.|||++.+..+...+||||+||++.||++|..-|.+. ..+.+|.+. .- ++ ...+
T Consensus 172 -----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~----d~idQ~~ki~~~lgtpd~~F~~ 242 (369)
T KOG0665|consen 172 -----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK----DHIDQWNKIIEQLGTPDPSFMK 242 (369)
T ss_pred -----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc----hHHHHHHHHHHHhcCCCHHHHH
Confidence 2344577899999999999988999999999999999999999988732 222222211 11 11 1111
Q ss_pred Hhhhhh------ccccccccccccchhhhhchhhHH---HHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 264 IVNLVL------LNDNKVLAGTNSNMLRKTKMNSRL---ECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 264 ~~~~~l------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
-+.+.. .+.+.. ......+-+-.++...+ .......+++.+||-.||++|.++++++.
T Consensus 243 qL~~~~r~yv~~~~~y~~-~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 243 QLQPTVRNYVENRPQYQA-ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HhhHHHHHHhhcChHhhc-cchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 111110 011100 11111111111111111 12234678999999999999999999875
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=6.1e-28 Score=226.19 Aligned_cols=161 Identities=23% Similarity=0.357 Sum_probs=139.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC--------ccchHHHHHHHHHHhhcC---CCChHHHH----
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--------QGASKSFMAECKALKNIC---HRNLVRFI---- 135 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~---- 135 (356)
..+|..++.+|.|+||.|++|.++.++..|+||.+.++. ......+-.|++||..++ |+||++++
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 456999999999999999999999999999999987542 111223557999999998 99999983
Q ss_pred ----------------------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccc
Q 039228 136 ----------------------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFEL 181 (356)
Q Consensus 136 ----------------------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 181 (356)
-|+.|++.|+++||..| |||||||-+|+.++.+|-+||+|||.
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccc
Confidence 28899999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCccCCCCccccccccchhhhcCCCCC-CccchHhHHHHHHHHHcCCCCCC
Q 039228 182 ARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS-TNGDAYNYGILLLEMVTRRKPID 240 (356)
Q Consensus 182 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlG~~l~elltg~~Pf~ 240 (356)
+..... .....++||..|.|||++.|.+|- ..-|||++|++||.++....||-
T Consensus 717 aa~~ks------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 717 AAYTKS------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhhcC------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 975432 344568999999999999998874 55799999999999999999985
No 398
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1e-27 Score=226.65 Aligned_cols=171 Identities=24% Similarity=0.262 Sum_probs=141.3
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
.-|..++.||-|+||+|.+++-..|+..||+|.+.+.+ ......+..|-+||...+.+-||+|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 34778889999999999999999999999999997543 2334567789999999999999987
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccC---
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEV--- 188 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 188 (356)
..++.++..|+++.|..| +|||||||+|||||.+|++||+|||++.-+...
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceecccc
Confidence 235678999999999999 999999999999999999999999998532110
Q ss_pred -----CC------------------------------CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHH
Q 039228 189 -----SN------------------------------PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMV 233 (356)
Q Consensus 189 -----~~------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ell 233 (356)
++ .........+||..|+|||++....|+..+|.||.|||||||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 00 0112234567999999999999999999999999999999999
Q ss_pred cCCCCCCccccC
Q 039228 234 TRRKPIDFMFEG 245 (356)
Q Consensus 234 tg~~Pf~~~~~~ 245 (356)
.|++||-.....
T Consensus 866 ~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 866 VGQPPFLADTPG 877 (1034)
T ss_pred hCCCCccCCCCC
Confidence 999999654443
No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-25 Score=193.80 Aligned_cols=216 Identities=16% Similarity=0.191 Sum_probs=155.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l---------------- 134 (356)
+.|.+.+.||+|-||.+-+++++.+++.+++|.++... ...+.|.+|...--.|. |.||+.-
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 45999999999999999999999999999999997553 34577888887655554 8899875
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC--CCCceEEcccccccccccCCCC
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLD--NDLFAHIGDFELARFRQEVSNP 191 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~--~~~~~kl~Dfg~a~~~~~~~~~ 191 (356)
..++.|++.||.|||+.+ +||||||.+||||- +...+||+|||+.+..+.
T Consensus 103 ~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~---- 175 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT---- 175 (378)
T ss_pred cCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCc----
Confidence 337888999999999998 99999999999994 455899999999874332
Q ss_pred CccCCCCccccccccchhhhcC---C--CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhh
Q 039228 192 TQSSSNGVRRTIGYTALDYDLG---S--EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVN 266 (356)
Q Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (356)
......-+..|.+||.... + ...+.+|+|.||+++|.++||.+||+.....+....+|....-....
T Consensus 176 ---tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~----- 247 (378)
T KOG1345|consen 176 ---TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP----- 247 (378)
T ss_pred ---eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc-----
Confidence 1122333556889997643 2 24678899999999999999999998655555555444332211110
Q ss_pred hhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 267 LVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.+...+. .....+..+..+-+..+|++|=-..++-++
T Consensus 248 -~~P~~F~-------------------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 248 -ALPKKFN-------------------PFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred -cCchhhc-------------------ccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 1100100 122245677888899999999444444433
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=4.4e-25 Score=190.45 Aligned_cols=173 Identities=25% Similarity=0.395 Sum_probs=147.0
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH------------------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF------------------------ 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l------------------------ 134 (356)
||.|++|.||++....+++.+++|++...... ....+.+|+..++.++|++++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 68999999999999888899999998755332 34678899999999999999876
Q ss_pred --------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC-CCceEEcccccccccccCCCCCccCCCCc
Q 039228 135 --------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN-DLFAHIGDFELARFRQEVSNPTQSSSNGV 199 (356)
Q Consensus 135 --------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 199 (356)
..++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+........ .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~----~~~~~ 153 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS----LLKTI 153 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----hhhcc
Confidence 347789999999999998 999999999999999 89999999999976543221 12234
Q ss_pred cccccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccc
Q 039228 200 RRTIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAG 278 (356)
Q Consensus 200 ~gt~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 278 (356)
.+...|++||..... .++.++|+|++|+++++|
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 567889999999877 788999999999999999
Q ss_pred cccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 279 TNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 035789999999999999999999864
No 401
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=7.3e-26 Score=205.81 Aligned_cols=250 Identities=22% Similarity=0.277 Sum_probs=170.0
Q ss_pred HHhhcCCCCccccceecCceEEEEEEECC---CCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CCChHHH--------
Q 039228 67 LLKATDGFPLINLIGVGSFDAVYQGVFDL---NRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLVRF-------- 134 (356)
Q Consensus 67 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l-------- 134 (356)
+....+.|..+++||.|.|++||+|.+.. .++.||+|.+.... ...++.+|+++|..+. +.||+.+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 34456679999999999999999999877 78899999986432 3467889999999986 6788776
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC-CCCceEEccccccccccc
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLD-NDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~ 187 (356)
..++..++.||.++|..| ||||||||+|+|.+ ..+.-.|.|||+|...+.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHHHHHh
Confidence 347788999999999999 99999999999997 456778999999972110
Q ss_pred CC----------------------------------------CCCccCCCCccccccccchhhhcCC-CCCCccchHhHH
Q 039228 188 VS----------------------------------------NPTQSSSNGVRRTIGYTALDYDLGS-EVSTNGDAYNYG 226 (356)
Q Consensus 188 ~~----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG 226 (356)
.. ...........||++|.|||++... ..+++.||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 00 0001112345699999999998764 478899999999
Q ss_pred HHHHHHHcCCCCCCccccCCccHHHHHHHhC----------CCc--hHHH----hhhhhccccccccccccchhhh----
Q 039228 227 ILLLEMVTRRKPIDFMFEGDLNLHNFARMAF----------PNR--VMDI----VNLVLLNDNKVLAGTNSNMLRK---- 286 (356)
Q Consensus 227 ~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~----------~~~--~~~~----~~~~l~~~~~~~~~~~~~~~~~---- 286 (356)
|+++-+++++.||-...++-..+.+.+...- .+. +++- ..+.+...+.... ...+...
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~--~~~~~~~~q~n 343 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLH--IESIYKSRQPN 343 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccC--hhhcccccccc
Confidence 9999999999999766555444444332221 122 1110 0000000000000 0000000
Q ss_pred hchhhHHH-HHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 287 TKMNSRLE-CLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 287 ~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
.....-.+ .+..+.+++.+|++.||.+|.|+++.|+.
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 01111112 22367899999999999999999998863
No 402
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=3.9e-25 Score=187.53 Aligned_cols=156 Identities=17% Similarity=0.143 Sum_probs=114.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchh
Q 039228 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALD 209 (356)
Q Consensus 130 niv~l~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 209 (356)
..-.++.++.|++.||.|||+.+ ||+||+++.++.+++ ||++...... ...|++.|+|||
T Consensus 15 ~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~---------~~~g~~~y~aPE 74 (176)
T smart00750 15 NEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE---------QSRVDPYFMAPE 74 (176)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc---------cCCCcccccChH
Confidence 34456789999999999999875 999999999999999 9999765331 125789999999
Q ss_pred hhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhch
Q 039228 210 YDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKM 289 (356)
Q Consensus 210 ~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 289 (356)
++.+..++.++|||||||++|||+||+.||.........+...... ........ .
T Consensus 75 ~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~------------~~~~~~~~-------------~ 129 (176)
T smart00750 75 VIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNG------------MPADDPRD-------------R 129 (176)
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHH------------hccCCccc-------------c
Confidence 9999999999999999999999999999986432211111111111 11000000 0
Q ss_pred hhHHHHH--HHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhh
Q 039228 290 NSRLECL--IFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNI 330 (356)
Q Consensus 290 ~~~~~~~--~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~ 330 (356)
....... ..+.+++.+||+.+|.+||++.++++.+..+...
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0001122 2588999999999999999999999999877543
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-26 Score=219.69 Aligned_cols=218 Identities=18% Similarity=0.243 Sum_probs=171.0
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHHH--------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFI-------------- 135 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~-------------- 135 (356)
..++|.+++.+|.|.+|.||+|+++.++...|+|+++.......+-+..|+-+++..+||||+.++
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 356799999999999999999999999999999999988777788888999999999999999982
Q ss_pred -----------------------HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 136 -----------------------SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 136 -----------------------~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
.++++.+.||+|||+.+ =+|||||-.||++++.|.+|++|||.+..+.. .
T Consensus 93 ycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqita----t 165 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITA----T 165 (829)
T ss_pred ecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhh----h
Confidence 26788999999999999 89999999999999999999999999865432 2
Q ss_pred ccCCCCccccccccchhhh---cCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 193 QSSSNGVRRTIGYTALDYD---LGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
......+.||+.|||||+. ..+.|...+|||++|++..|+-.-++|.... ...+........ ..++.-
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl----hpmr~l~LmTkS-----~~qpp~ 236 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL----HPMRALFLMTKS-----GFQPPT 236 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc----chHHHHHHhhcc-----CCCCCc
Confidence 3445568999999999976 3567899999999999999998888874311 111111111000 011111
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..+. ..-...+-+++..|+-.+|.+||+++.++.
T Consensus 237 lkDk-------------------~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 237 LKDK-------------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ccCC-------------------ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1110 122335678999999999999999998875
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=2.4e-24 Score=188.89 Aligned_cols=162 Identities=30% Similarity=0.404 Sum_probs=138.2
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc-chHHHHHHHHHHhhcCCCChHHH------------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG-ASKSFMAECKALKNICHRNLVRF------------------ 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l------------------ 134 (356)
|.+.+.||.|++|.||+|....++..+|+|.+...... ..+.+.+|+..+++++|+|++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 56778999999999999999988899999999866544 56788999999999999999987
Q ss_pred --------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCcc
Q 039228 135 --------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQS 194 (356)
Q Consensus 135 --------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 194 (356)
..++.+++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~---~ 154 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA---A 154 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc---c
Confidence 236778999999999998 99999999999999999999999999986543320 1
Q ss_pred CCCCccccccccchhhh-cCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 195 SSNGVRRTIGYTALDYD-LGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 195 ~~~~~~gt~~y~aPE~~-~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
......++..|++||.. ....++.++|+|+||+++++|++|+.||..
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22335567889999998 666788899999999999999999999963
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=3.3e-24 Score=222.07 Aligned_cols=156 Identities=14% Similarity=0.147 Sum_probs=107.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC-------------------CCceEEcccccccccccCCC
Q 039228 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN-------------------DLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 130 niv~l~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-------------------~~~~kl~Dfg~a~~~~~~~~ 190 (356)
+...++.++.||+.||.|||+++ |+||||||+||||+. ++.+|++|||+++.......
T Consensus 78 ~~~~~~~i~~qi~~al~~lH~~g---IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~ 154 (793)
T PLN00181 78 DAFECFHVFRQIVEIVNAAHSQG---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSE 154 (793)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccc
Confidence 45566789999999999999999 999999999999954 44556666666653211000
Q ss_pred ------------CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCC
Q 039228 191 ------------PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFP 258 (356)
Q Consensus 191 ------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 258 (356)
..........||+.|+|||++.+..++.++|||||||++|||++|.+|+.... ..+........+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~~ 231 (793)
T PLN00181 155 RRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVLP 231 (793)
T ss_pred cchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhcC
Confidence 00001122457889999999999999999999999999999999988864211 011111111000
Q ss_pred CchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 259 NRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+.. .........++.+||+.+|.+||+|.+|++
T Consensus 232 --------~~~-----------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 232 --------PQI-----------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred --------hhh-----------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 000 011123457888999999999999999976
No 406
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=3.2e-22 Score=186.78 Aligned_cols=142 Identities=22% Similarity=0.124 Sum_probs=113.3
Q ss_pred hcCCCCccccceecCceEEEEEEECC-CCeEEEEEEeecc-----CccchHHHHHHHHHHhhcCCCChHHH---------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDL-NRAVVAIKVLSIQ-----CQGASKSFMAECKALKNICHRNLVRF--------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l--------- 134 (356)
..++|.+.+.||+|+||+||+|.+.. +++.||||++... .......+.+|+.+|++++|+|+++.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~L 95 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGL 95 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEE
Confidence 45779999999999999999999876 6788899986532 11234568899999999999999841
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCC-CCCCeEeCCCCceEEcccccccccccCCCCCc--
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDP-KPSNVLLDNDLFAHIGDFELARFRQEVSNPTQ-- 193 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dl-kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~-- 193 (356)
..++.+++.||.|||+.| |+|||| ||+|||++.++.++|+|||+++.+........
T Consensus 96 VmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~ 172 (365)
T PRK09188 96 VRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIA 172 (365)
T ss_pred EEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhh
Confidence 357788999999999999 999999 99999999999999999999987644321111
Q ss_pred --cCCCCccccccccchhhhcCC
Q 039228 194 --SSSNGVRRTIGYTALDYDLGS 214 (356)
Q Consensus 194 --~~~~~~~gt~~y~aPE~~~~~ 214 (356)
.......+++.|.|||++...
T Consensus 173 ~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 173 AYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred hhhhhhhhhccCccCCcccCChh
Confidence 111356778889999988643
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.3e-21 Score=180.50 Aligned_cols=228 Identities=21% Similarity=0.199 Sum_probs=162.6
Q ss_pred CCCccccceecCceEEEEEEECCCC-eEEEEEEeeccCccchHHHHHHHHHHhhcCC----CChHHH-------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNR-AVVAIKVLSIQCQGASKSFMAECKALKNICH----RNLVRF------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l------------- 134 (356)
+|++.+.||+|+||.||.|.+..++ ..+|+|............+..|+.++..+.. +++..+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 7999999999999999999988764 6899999875533332367778888877762 111111
Q ss_pred --------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC-----CceEEccccccc
Q 039228 135 --------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND-----LFAHIGDFELAR 183 (356)
Q Consensus 135 --------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-----~~~kl~Dfg~a~ 183 (356)
+.|+.|++.+|.+||+.| ++||||||+|++++.. ..+.|.|||+++
T Consensus 99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 668999999999999999 9999999999999854 468999999998
Q ss_pred ccc--cCCCC----CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhC
Q 039228 184 FRQ--EVSNP----TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAF 257 (356)
Q Consensus 184 ~~~--~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~ 257 (356)
... ..... .........||..|.++....+...+.+.|+||++.++.+++.|..||........ .........
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~ 254 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPR 254 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhh
Confidence 322 22111 11113456799999999999999999999999999999999999999965432211 111111110
Q ss_pred CCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 258 PNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 258 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
... ... .. ...+..+..+...+-..+..++|....+...|.......
T Consensus 255 ~~~----~~~-~~----------------------~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 255 KLL----TDR-FG----------------------DLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hhc----ccc-cc----------------------CCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 000 000 00 012234455555566689999999999999998886653
No 408
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=8.7e-21 Score=170.26 Aligned_cols=194 Identities=20% Similarity=0.208 Sum_probs=130.2
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCc---cchHHHHHHHHHHhhcCC-CC----------hHHH-----
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ---GASKSFMAECKALKNICH-RN----------LVRF----- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~n----------iv~l----- 134 (356)
+.....||.|+++.||.+++..|++.+|+|++..... ...+.+.+|.-....+.+ .| ++.+
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 5667899999999999999999999999999864332 234556666655544433 11 1111
Q ss_pred ------------------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecC
Q 039228 135 ------------------------------------------------------ISIAIDVASALDYLHHHCQELILHCD 160 (356)
Q Consensus 135 ------------------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~D 160 (356)
+.+..|++..+++||..| ++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgd 170 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGD 170 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecc
Confidence 335578899999999999 99999
Q ss_pred CCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcC--------CCCCCccchHhHHHHHHHH
Q 039228 161 PKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG--------SEVSTNGDAYNYGILLLEM 232 (356)
Q Consensus 161 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDiwSlG~~l~el 232 (356)
|+|+|++++.+|.+.|+||+.....+.... . ...+..|.+||.... -.++.+.|.|+||+++|.|
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYR-----C--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEEE-----G--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCceee-----c--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 999999999999999999998765433211 0 223467899997643 2468889999999999999
Q ss_pred HcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcC
Q 039228 233 VTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQ 312 (356)
Q Consensus 233 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~ 312 (356)
++|..||........... .+ ..+ .+.++.+..||...|+.||+
T Consensus 244 WC~~lPf~~~~~~~~~~~-----------------~f-~~C-------------------~~~Pe~v~~LI~~lL~~~~~ 286 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADPEW-----------------DF-SRC-------------------RDMPEPVQFLIRGLLQRNPE 286 (288)
T ss_dssp HHSS-STCCCGGGSTSGG-----------------GG-TTS-------------------S---HHHHHHHHHHT-SSGG
T ss_pred HHccCCCCCCCccccccc-----------------cc-hhc-------------------CCcCHHHHHHHHHHccCCcc
Confidence 999999986533221100 00 011 14555788999999999999
Q ss_pred CC
Q 039228 313 DR 314 (356)
Q Consensus 313 ~R 314 (356)
+|
T Consensus 287 ~R 288 (288)
T PF14531_consen 287 DR 288 (288)
T ss_dssp GS
T ss_pred cC
Confidence 88
No 409
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=2.3e-21 Score=192.27 Aligned_cols=221 Identities=15% Similarity=0.122 Sum_probs=161.4
Q ss_pred CccccceecCceEEEEEEECCCCeEEEEEEeecc--Ccc----chHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 75 PLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ--CQG----ASKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~----~~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
....++|.|++|.|+.+........++.|.+... ... ....+..|+-+-..+.|||++..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4567899999998888877665565666654311 111 11225567777788899997754
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
-.++.|++.|+.|+|..| |.|||+|++|+++..+|.+||+|||.+..+.......
T Consensus 401 E~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 401 EYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred hcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 126778999999999999 9999999999999999999999999998765554444
Q ss_pred ccCCCCccccccccchhhhcCCCCCCc-cchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhcc
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVSTN-GDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLN 271 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (356)
.......+|+..|+|||++.+..|.+. .||||.|+++..|.+|+.||......+..+.. .....+.....
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~~~~~~~~~~------ 548 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NNYSDQRNIFE------ 548 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---hcccccccccc------
Confidence 456677899999999999999998765 69999999999999999999765544433200 00111100000
Q ss_pred ccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 272 DNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
.........+.....++.++|+.||.+|.|+++|++
T Consensus 549 ---------------~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 549 ---------------GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ---------------ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 001111244556678999999999999999999986
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=1.2e-19 Score=161.00 Aligned_cols=167 Identities=22% Similarity=0.309 Sum_probs=136.4
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC-CCChHHH----------------
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC-HRNLVRF---------------- 134 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l---------------- 134 (356)
-+|++.++||+|+||+++.|...-+++.||||.-+.... ..++..|.+..+.|. .++|..+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 469999999999999999999999999999998764432 346677777777665 3444433
Q ss_pred ---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC-----CceEEcccccccccccC
Q 039228 135 ---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND-----LFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 ---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-----~~~kl~Dfg~a~~~~~~ 188 (356)
..++.|++.-++|+|++. +|+|||||+|+||... ..+.|+|||+|+.....
T Consensus 106 LGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 106 LGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred hCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 447889999999999999 9999999999999743 35889999999976544
Q ss_pred CCC---CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCccc
Q 039228 189 SNP---TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMF 243 (356)
Q Consensus 189 ~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~ 243 (356)
... .........||..||+-....+.+.+.+.|+=|||-++++.|-|..||.+..
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 332 1233455779999999999999999999999999999999999999998754
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=5.3e-20 Score=156.56 Aligned_cols=170 Identities=23% Similarity=0.329 Sum_probs=135.6
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCC----CChHHH-----------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICH----RNLVRF----------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l----------- 134 (356)
..+.|.+++.||+|+||.+|.|....+|..||||+-+.. .....+..|.++...|++ |+|-.+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 356799999999999999999999999999999996533 223467778888777764 333332
Q ss_pred -----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC---CCceEEcccccccccccC
Q 039228 135 -----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN---DLFAHIGDFELARFRQEV 188 (356)
Q Consensus 135 -----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~ 188 (356)
+-++-|++.-++|+|.++ +|||||||+|+|..- ...+.|+|||+|+..-..
T Consensus 91 dLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 91 DLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred eccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 346778999999999999 999999999999973 446789999999876443
Q ss_pred CCC---CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCcccc
Q 039228 189 SNP---TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFE 244 (356)
Q Consensus 189 ~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~ 244 (356)
... .........||..|.+-....+...+.+.|+=|+|.++.+..-|..||++...
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 321 12334457799999998888888888999999999999999999999986543
No 412
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.82 E-value=1.1e-20 Score=188.61 Aligned_cols=232 Identities=21% Similarity=0.208 Sum_probs=157.0
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChH----HHHH----HHHHH
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLV----RFIS----IAIDV 141 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv----~l~~----i~~~i 141 (356)
...+|..++.|..|++|.||.++++.+.+.+|+|+ ++... +.+- ++.....|.+| .++. .-.++
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvvgDc~tllk~~g~lPvdm 152 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVVGDCATLLKNIGPLPVDM 152 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCcceechhhhhcccCCCCcchh
Confidence 35689999999999999999999999999999954 32211 1111 44444555553 1111 12345
Q ss_pred HHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC-----------CCccCCCCccccccccchhh
Q 039228 142 ASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN-----------PTQSSSNGVRRTIGYTALDY 210 (356)
Q Consensus 142 ~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~~~~gt~~y~aPE~ 210 (356)
+.+++|||+.+ |+|||+||+|.+|..-|++|++|||+.+..-.... ...-....++||+.|.|||+
T Consensus 153 vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV 229 (1205)
T KOG0606|consen 153 VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV 229 (1205)
T ss_pred hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence 88999999999 99999999999999999999999999975422111 12233456789999999999
Q ss_pred hcCCCCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchh
Q 039228 211 DLGSEVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMN 290 (356)
Q Consensus 211 ~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 290 (356)
+....|+..+|+|++|+++||.+.|..||.....+ +++...+..+. .|++
T Consensus 230 ilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe-----------------elfg~visd~i-------------~wpE 279 (1205)
T KOG0606|consen 230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-----------------ELFGQVISDDI-------------EWPE 279 (1205)
T ss_pred hhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH-----------------HHHhhhhhhhc-------------cccc
Confidence 99999999999999999999999999999753221 11111111111 0111
Q ss_pred hHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhhccccccccCCcCCc
Q 039228 291 SRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNILLPETVFKSLTNNRA 345 (356)
Q Consensus 291 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~~~~~~~~~~~~~~~ 345 (356)
.+...+.+..+++.+.|+.+|..|--... .++--.+.+.....|.+|-.+++
T Consensus 280 ~dea~p~Ea~dli~~LL~qnp~~Rlgt~g---a~evk~h~ff~~LDw~~llRqka 331 (1205)
T KOG0606|consen 280 EDEALPPEAQDLIEQLLRQNPLCRLGTGG---ALEVKQHGFFQLLDWKSLLRQKA 331 (1205)
T ss_pred cCcCCCHHHHHHHHHHHHhChHhhcccch---hhhhhhccceeecccchhhhhhc
Confidence 12233445678888889999999964332 22222333333444454444443
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=6e-19 Score=161.74 Aligned_cols=222 Identities=24% Similarity=0.334 Sum_probs=162.0
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc---chHHHHHHHHHHhhcCCC-ChHHH---------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG---ASKSFMAECKALKNICHR-NLVRF--------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l--------------- 134 (356)
|.+.+.||.|+||.||++.+. ..+++|.+...... ....+.+|+.++..+.|+ +++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 677889999999999999987 78899998754333 356789999999999988 68776
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC-ceEEcccccccccccC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL-FAHIGDFELARFRQEV 188 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 188 (356)
..++.+++.++.|+|..+ ++|||+||+||+++..+ .++++|||.++.....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 346778999999999999 99999999999999888 7999999999855433
Q ss_pred CCCCc--cCCCCccccccccchhhhcC---CCCCCccchHhHHHHHHHHHcCCCCCCccccC--CccHHHHHHHhCCCch
Q 039228 189 SNPTQ--SSSNGVRRTIGYTALDYDLG---SEVSTNGDAYNYGILLLEMVTRRKPIDFMFEG--DLNLHNFARMAFPNRV 261 (356)
Q Consensus 189 ~~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~--~~~~~~~~~~~~~~~~ 261 (356)
..... .......|+..|++||.+.+ ..++...|+||+|++++++++|..||...... ..............
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-- 233 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-- 233 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--
Confidence 32111 13456788999999999987 57889999999999999999999997543221 01111111111000
Q ss_pred HHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHH
Q 039228 262 MDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHD 323 (356)
Q Consensus 262 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~ 323 (356)
........ .........+.+++..|+..+|..|.++.+....
T Consensus 234 ------~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ------SLASPLSP--------------SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ------ccccccCc--------------cccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000 0001223456789999999999999998887765
No 414
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=6.2e-21 Score=178.76 Aligned_cols=93 Identities=29% Similarity=0.464 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC--CCccCCCCccccccccchhhhcC
Q 039228 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN--PTQSSSNGVRRTIGYTALDYDLG 213 (356)
Q Consensus 136 ~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~ 213 (356)
.++.|++.|+.| ++ .+|+|+||.||+...+..+||+|||+......... ........-.||..||+||.+.+
T Consensus 363 ~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g 436 (516)
T KOG1033|consen 363 DIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG 436 (516)
T ss_pred HHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh
Confidence 367788888888 66 99999999999999999999999999875543321 11223455779999999999999
Q ss_pred CCCCCccchHhHHHHHHHHHc
Q 039228 214 SEVSTNGDAYNYGILLLEMVT 234 (356)
Q Consensus 214 ~~~~~~sDiwSlG~~l~ellt 234 (356)
..|+.++||||||++++|+++
T Consensus 437 ~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 437 QQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhhcchhhHHHHHHHHHH
Confidence 999999999999999999997
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=1.8e-19 Score=180.42 Aligned_cols=214 Identities=16% Similarity=0.165 Sum_probs=149.6
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-ccc---hHHHHHHHHHHhhcCCCChHHH--------------
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-QGA---SKSFMAECKALKNICHRNLVRF-------------- 134 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~---~~~~~~E~~~l~~l~h~niv~l-------------- 134 (356)
+|...+.||++.|=.|.+|++.++ .|+||++-+.. .-. .++.+.|++ ...++|||.+++
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG--~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG--LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc--eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 677888999999999999998754 49999985443 222 234445555 566789999887
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccc--ccCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR--QEVSN 190 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~--~~~~~ 190 (356)
.-|+.|++.||..+|..| |+|||||.+||||+.=..+.|+||..-+.. ...+.
T Consensus 101 qyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 101 QYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 127889999999999999 999999999999999999999999876532 22221
Q ss_pred C-CccCCCCccccccccchhhhcCC----------C-CCCccchHhHHHHHHHHHc-CCCCCCccccCCccHHHHHHHhC
Q 039228 191 P-TQSSSNGVRRTIGYTALDYDLGS----------E-VSTNGDAYNYGILLLEMVT-RRKPIDFMFEGDLNLHNFARMAF 257 (356)
Q Consensus 191 ~-~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 257 (356)
. ..........-.+|.|||.+... . .+++-||||+||++.|+++ |++||... .+..+....
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~- 251 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGN- 251 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccC-
Confidence 1 11111222234579999987542 1 5678899999999999998 78888621 111111111
Q ss_pred CCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHH
Q 039228 258 PNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDL 324 (356)
Q Consensus 258 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L 324 (356)
.......+...- + ..+.++++.|++.||.+|-++++.++.-
T Consensus 252 ~~~~e~~Le~Ie------------------------d--~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 252 ADDPEQLLEKIE------------------------D--VSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred ccCHHHHHHhCc------------------------C--ccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 111111111110 1 1467899999999999999999999873
No 416
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=5.9e-19 Score=159.91 Aligned_cols=152 Identities=18% Similarity=0.157 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC--CCC--ceEEcccccccccccC--CCCCccCCCCccccccccchhh
Q 039228 137 IAIDVASALDYLHHHCQELILHCDPKPSNVLLD--NDL--FAHIGDFELARFRQEV--SNPTQSSSNGVRRTIGYTALDY 210 (356)
Q Consensus 137 i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~--~~~--~~kl~Dfg~a~~~~~~--~~~~~~~~~~~~gt~~y~aPE~ 210 (356)
++.|+++|+.|||.+| |.|||+|++|||+. +++ .+.|+|||++---+.. ..+.....-..-|....||||+
T Consensus 346 ~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi 422 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEI 422 (598)
T ss_pred HHHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhh
Confidence 7789999999999999 99999999999993 443 4689999998532211 1111222223446677899999
Q ss_pred hcCCC------CCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchh
Q 039228 211 DLGSE------VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNML 284 (356)
Q Consensus 211 ~~~~~------~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 284 (356)
....+ --.++|.|+.|.+.||+++...||-...+...+...+.+..+
T Consensus 423 ~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL--------------------------- 475 (598)
T KOG4158|consen 423 ATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL--------------------------- 475 (598)
T ss_pred hhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC---------------------------
Confidence 86532 125789999999999999999999642211112221111111
Q ss_pred hhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 285 RKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 285 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
+..+..++..+.+|+...|+.||.+|++..=...
T Consensus 476 ----Palp~~vpp~~rqlV~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 476 ----PALPSRVPPVARQLVFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred ----CCCcccCChHHHHHHHHHhcCCccccCCccHHHh
Confidence 1111245556778999999999999998654333
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.77 E-value=3.8e-19 Score=155.16 Aligned_cols=142 Identities=14% Similarity=0.156 Sum_probs=108.7
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchH---H------HHHHHHHHhhcCCCChHHH------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASK---S------FMAECKALKNICHRNLVRF------ 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~h~niv~l------ 134 (356)
..++|++.++||.|+||.||++.. ++..+|||++......... . +.+|+..+.++.|++|..+
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 357899999999999999999655 3568999999744332222 2 5789999999999987765
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
-....+++.+|..+|..| ++|||++|+||+++.+| ++|+|||...
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~liDfg~~~ 182 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LRIIDLSGKR 182 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EEEEECCCcc
Confidence 123568999999999999 99999999999999988 9999999886
Q ss_pred ccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHH
Q 039228 184 FRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMV 233 (356)
Q Consensus 184 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~ell 233 (356)
....... ...+.....+..++|+||||+++....
T Consensus 183 ~~~e~~a----------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 183 CTAQRKA----------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred cccchhh----------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 4321110 011344455667899999999876543
No 418
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.77 E-value=2.9e-19 Score=154.61 Aligned_cols=211 Identities=19% Similarity=0.264 Sum_probs=150.0
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccC--ccchHHHHHHHHHHhhcCCCChHHH-----------------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC--QGASKSFMAECKALKNICHRNLVRF----------------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l----------------- 134 (356)
..++-+|.....|+.|+|++. |..+++|+++... ......|..|...|+-+.||||+.+
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 445557888999999999997 5567788876432 2334678889999999999999987
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCC
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPT 192 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 192 (356)
..++.+|++|++|||+.. +-|.---|.+..++||++.+.+|+ .+-+++.
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris-mad~kfs------- 340 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS-MADTKFS------- 340 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee-cccceee-------
Confidence 457889999999999974 223344688999999999888764 2222211
Q ss_pred ccCCCCccccccccchhhhcCCCCC---CccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhh
Q 039228 193 QSSSNGVRRTIGYTALDYDLGSEVS---TNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVL 269 (356)
Q Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (356)
....+..-.+.|++||.+...+-+ .++|+|||++++||+.|...||.....-.....-... .+
T Consensus 341 -fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale-------------gl 406 (448)
T KOG0195|consen 341 -FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE-------------GL 406 (448)
T ss_pred -eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc-------------cc
Confidence 111122336789999999765533 4689999999999999999999765433222111110 01
Q ss_pred ccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHh
Q 039228 270 LNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSV 327 (356)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i 327 (356)
. ..+++.....+..|+.-|.+.||.+||.++.|+-.|++.
T Consensus 407 r------------------v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 407 R------------------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred c------------------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 1 011123334567899999999999999999999988875
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.73 E-value=9.3e-19 Score=167.23 Aligned_cols=150 Identities=25% Similarity=0.217 Sum_probs=120.4
Q ss_pred cceecCceEEEEEEE---CCCCeEEEEEEeeccCcc--chHHHHHHHHHHhhcC-CCChHHH------------------
Q 039228 79 LIGVGSFDAVYQGVF---DLNRAVVAIKVLSIQCQG--ASKSFMAECKALKNIC-HRNLVRF------------------ 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l------------------ 134 (356)
++|.|.||.|++++- ...+..+|+|++++.... .......|..++...+ ||.+|++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999987653 234688999988644221 1124556788888887 8988876
Q ss_pred -------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccC
Q 039228 135 -------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSS 195 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 195 (356)
..+..+++.|++++|+.+ |+|||+|++||+++.+|++++.|||+++..-....
T Consensus 81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~----- 152 (612)
T KOG0603|consen 81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI----- 152 (612)
T ss_pred cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhh-----
Confidence 124567899999999999 99999999999999999999999999986543221
Q ss_pred CCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCc
Q 039228 196 SNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDF 241 (356)
Q Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~ 241 (356)
.+||..|||||++. .....+|.||||++++||+||..||..
T Consensus 153 ---~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 153 ---ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ---cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 27899999999998 567889999999999999999999974
No 420
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.72 E-value=7.5e-18 Score=144.67 Aligned_cols=103 Identities=19% Similarity=0.140 Sum_probs=81.2
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeeccCcc--c-------h-----------------HHHHHHHHHHhhcCCCC
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG--A-------S-----------------KSFMAECKALKNICHRN 130 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~n 130 (356)
...||+|+||.||+|... +|+.||||+++..... . . .....|+..+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999987 7899999999754211 0 0 12234888888886554
Q ss_pred hHH-----------------------------------HHHHHHHHHHHHHHH-hhcCCCcEEecCCCCCCeEeCCCCce
Q 039228 131 LVR-----------------------------------FISIAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDLFA 174 (356)
Q Consensus 131 iv~-----------------------------------l~~i~~~i~~aL~~L-H~~~~~~iiH~Dlkp~NIll~~~~~~ 174 (356)
+.. +..++.|++.+|.++ |+.+ |+||||||+||+++ ++.+
T Consensus 81 v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~~v 156 (190)
T cd05147 81 IPCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DGKL 156 (190)
T ss_pred CCCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CCcE
Confidence 311 145788999999999 6888 99999999999998 4789
Q ss_pred EEcccccccc
Q 039228 175 HIGDFELARF 184 (356)
Q Consensus 175 kl~Dfg~a~~ 184 (356)
+|+|||+|..
T Consensus 157 ~LiDFG~a~~ 166 (190)
T cd05147 157 YIIDVSQSVE 166 (190)
T ss_pred EEEEcccccc
Confidence 9999999964
No 421
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.72 E-value=2.8e-17 Score=141.37 Aligned_cols=104 Identities=18% Similarity=0.102 Sum_probs=84.8
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeeccCccc--------------------------hHHHHHHHHHHhhcCCCC
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA--------------------------SKSFMAECKALKNICHRN 130 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 130 (356)
...||+|+||.||+|.+. +|+.||||+++...... ...+..|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 568999999999999987 78999999987542110 112356888888888776
Q ss_pred hHHH-----------------------------------HHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCce
Q 039228 131 LVRF-----------------------------------ISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFA 174 (356)
Q Consensus 131 iv~l-----------------------------------~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~ 174 (356)
+... ..++.+++.+|.++|+ .| |+||||||+||+++ ++.+
T Consensus 81 i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 81 VPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CCCE
Confidence 5321 4578899999999999 88 99999999999999 8899
Q ss_pred EEccccccccc
Q 039228 175 HIGDFELARFR 185 (356)
Q Consensus 175 kl~Dfg~a~~~ 185 (356)
+|+|||++...
T Consensus 157 ~liDFG~a~~~ 167 (190)
T cd05145 157 YIIDVSQAVEL 167 (190)
T ss_pred EEEEcccceec
Confidence 99999999754
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=3.4e-17 Score=140.21 Aligned_cols=163 Identities=16% Similarity=-0.017 Sum_probs=115.5
Q ss_pred CccccceecCceEEEEEEECCCCeEEEEEEeeccCccc----hHHHHHHHHHHhhcCC-CChHHH---------------
Q 039228 75 PLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA----SKSFMAECKALKNICH-RNLVRF--------------- 134 (356)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~h-~niv~l--------------- 134 (356)
.+...|++|+||+||.+.. .+..++.+.+.....-. ...+.+|+++|++|.| ++++++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G 82 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAG 82 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecC
Confidence 4567899999999997765 46788877776443311 1257889999999964 445443
Q ss_pred -----------HHHHHHHHHHHHHHhhcCCCcEEecCC-CCCCeEeCCCCceEEcccccccccccCCCC----Cc-----
Q 039228 135 -----------ISIAIDVASALDYLHHHCQELILHCDP-KPSNVLLDNDLFAHIGDFELARFRQEVSNP----TQ----- 193 (356)
Q Consensus 135 -----------~~i~~~i~~aL~~LH~~~~~~iiH~Dl-kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----~~----- 193 (356)
..++.+++.+|.++|..| |+|||| ||+|||++.++.++|+|||++......... ..
T Consensus 83 ~~L~~~~~~~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~ 159 (218)
T PRK12274 83 AAMYQRPPRGDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRH 159 (218)
T ss_pred ccHHhhhhhhhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHH
Confidence 346788999999999999 999999 799999999999999999999854322110 00
Q ss_pred cCCCCccccccccchhhhcCC-CCC-CccchHhHHHHHHHHHcCCCCCCcc
Q 039228 194 SSSNGVRRTIGYTALDYDLGS-EVS-TNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 194 ~~~~~~~gt~~y~aPE~~~~~-~~~-~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
....-...++.|++|+...-- ..+ ...+.++.|.-+|.++|+..|+-..
T Consensus 160 llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 160 LLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 000011235667777643221 222 4568899999999999999987543
No 423
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.68 E-value=1.2e-16 Score=152.45 Aligned_cols=168 Identities=21% Similarity=0.293 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCcE-EecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcC
Q 039228 135 ISIAIDVASALDYLHHHCQELI-LHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLG 213 (356)
Q Consensus 135 ~~i~~~i~~aL~~LH~~~~~~i-iH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 213 (356)
..+.++|+.||.|||+.. | .|+.+++.|+++|....+||+|||+....... ..............|.|||.+.+
T Consensus 51 ~s~~rdi~~Gl~ylh~s~---i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~--~~~~~~~~~~~~~lw~aPellr~ 125 (484)
T KOG1023|consen 51 LSFIRDISKGLAYLHNSP---IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEET--AEPEAHHPIRKALLWTAPELLRG 125 (484)
T ss_pred HHHHHHHHHHHHHHhcCc---ceeeeeeccccceeeeeEEEEechhhhccccccc--ccccccchhHHHHhccCHHHhcc
Confidence 457789999999999875 5 89999999999999999999999998876431 11111122234567999999876
Q ss_pred CC-------CCCccchHhHHHHHHHHHcCCCCCCccccCCcc--HHHHHHHhCCCchHHHhhhhhccccccccccccchh
Q 039228 214 SE-------VSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLN--LHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNML 284 (356)
Q Consensus 214 ~~-------~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 284 (356)
.. .+.+.||||||++++|+++...||+........ +...+.... ...+.+....
T Consensus 126 ~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~--------~~~~rP~i~~--------- 188 (484)
T KOG1023|consen 126 ALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGG--------SNPFRPSIEL--------- 188 (484)
T ss_pred cccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcC--------CCCcCcchhh---------
Confidence 41 466799999999999999999999864433221 111111100 0001111000
Q ss_pred hhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHHHHHHhhhhh
Q 039228 285 RKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVHDLQSVNNIL 331 (356)
Q Consensus 285 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~~L~~i~~~~ 331 (356)
.. +....+..++..||..+|.+||++.++-..++.+....
T Consensus 189 ------~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 189 ------LN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ------hh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 00 22336789999999999999999999999999887754
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=1.4e-16 Score=161.96 Aligned_cols=164 Identities=18% Similarity=0.195 Sum_probs=124.0
Q ss_pred HHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC---CCChHHH--------
Q 039228 66 SLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC---HRNLVRF-------- 134 (356)
Q Consensus 66 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l-------- 134 (356)
+.......|.|.+.||+|+||.||.|.... ++.||+|+-+..... +|.-=.+++.+|+ -+.|..+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 334455679999999999999999999987 899999996543221 1111223333333 1112222
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeC-------CCCceEEcc
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLD-------NDLFAHIGD 178 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~-------~~~~~kl~D 178 (356)
+.+..+++.-++.||..+ |||+||||+|+||. +..-++|+|
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred cceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEe
Confidence 457789999999999999 99999999999994 345689999
Q ss_pred cccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCC
Q 039228 179 FELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238 (356)
Q Consensus 179 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~P 238 (356)
||.+--+.-..+ .......++|-.+-.+|...|.+++...|.|.|+.+++.||.|+.-
T Consensus 845 fG~siDm~lfp~--~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 845 FGRSIDMKLFPD--GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cccceeeeEcCC--CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 999965433222 3455667889999999999999999999999999999999999653
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.62 E-value=1.9e-15 Score=131.21 Aligned_cols=102 Identities=19% Similarity=0.263 Sum_probs=81.0
Q ss_pred CccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhc-----CCCChHHHH--------------
Q 039228 75 PLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNI-----CHRNLVRFI-------------- 135 (356)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~-------------- 135 (356)
.-...||+|+||.||. +..++.. +||++........+.+.+|+.+++.+ +||||++++
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 3456899999999995 6666555 69998765444567899999999999 579999871
Q ss_pred --------------------------HHHHHHHHHH-HHHhhcCCCcEEecCCCCCCeEeCC----CCceEEcccccc
Q 039228 136 --------------------------SIAIDVASAL-DYLHHHCQELILHCDPKPSNVLLDN----DLFAHIGDFELA 182 (356)
Q Consensus 136 --------------------------~i~~~i~~aL-~~LH~~~~~~iiH~Dlkp~NIll~~----~~~~kl~Dfg~a 182 (356)
.++.+++.++ +|||+++ ||||||||+|||++. ++.++|+||+.+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 1356777777 8999999 999999999999973 347999995444
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.57 E-value=1e-14 Score=129.56 Aligned_cols=115 Identities=18% Similarity=0.133 Sum_probs=89.5
Q ss_pred HHhhcCCCCccccceecCceEEEEEE-ECCCCeEEEEEEeeccCcc------------------------chHHHHHHHH
Q 039228 67 LLKATDGFPLINLIGVGSFDAVYQGV-FDLNRAVVAIKVLSIQCQG------------------------ASKSFMAECK 121 (356)
Q Consensus 67 ~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~ 121 (356)
+......|.+.+.||.|+||.||+|. +..+|+.||+|++...... ....+..|+.
T Consensus 23 ~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 102 (237)
T smart00090 23 LLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR 102 (237)
T ss_pred HHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH
Confidence 33444468899999999999999999 6667899999998743210 0123567999
Q ss_pred HHhhcCCCChH--H---------------------------------HHHHHHHHHHHHHHHhhcCCCcEEecCCCCCCe
Q 039228 122 ALKNICHRNLV--R---------------------------------FISIAIDVASALDYLHHHCQELILHCDPKPSNV 166 (356)
Q Consensus 122 ~l~~l~h~niv--~---------------------------------l~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NI 166 (356)
++.++.+.++. + ...++.+++.+|.+||..+ .|+||||||+||
T Consensus 103 ~L~~L~~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NI 180 (237)
T smart00090 103 NLQRLYEAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNI 180 (237)
T ss_pred HHHHHHhcCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhE
Confidence 98888653221 1 1368899999999999876 399999999999
Q ss_pred EeCCCCceEEcccccccc
Q 039228 167 LLDNDLFAHIGDFELARF 184 (356)
Q Consensus 167 ll~~~~~~kl~Dfg~a~~ 184 (356)
+++ ++.++|+|||.+..
T Consensus 181 li~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EEE-CCCEEEEEChhhhc
Confidence 999 88999999999864
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.57 E-value=1.9e-14 Score=124.53 Aligned_cols=116 Identities=23% Similarity=0.199 Sum_probs=89.6
Q ss_pred HHHhhcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCcc----------------------chHHHHHHHHHH
Q 039228 66 SLLKATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG----------------------ASKSFMAECKAL 123 (356)
Q Consensus 66 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l 123 (356)
.+......|.+.+.||.|+||.||+|... +++.||||++...... ....+..|..++
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 33344444888899999999999999875 6799999987643210 011356788888
Q ss_pred hhcCCCCh--HH---------------------------HHHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCce
Q 039228 124 KNICHRNL--VR---------------------------FISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA 174 (356)
Q Consensus 124 ~~l~h~ni--v~---------------------------l~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 174 (356)
..+.|+++ .. ...++.+++.++.++|+.+ |+|+||+|+||+++.++.+
T Consensus 88 ~~l~~~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~~~~ 164 (198)
T cd05144 88 KALYEEGFPVPKPIDWNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDDEKI 164 (198)
T ss_pred HHHHHcCCCCCceeecCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCCCcE
Confidence 88776632 11 1347889999999999999 9999999999999999999
Q ss_pred EEccccccccc
Q 039228 175 HIGDFELARFR 185 (356)
Q Consensus 175 kl~Dfg~a~~~ 185 (356)
+|+|||.+...
T Consensus 165 ~liDfg~~~~~ 175 (198)
T cd05144 165 YIIDWPQMVST 175 (198)
T ss_pred EEEECCccccC
Confidence 99999999643
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.49 E-value=1.1e-13 Score=119.69 Aligned_cols=100 Identities=22% Similarity=0.245 Sum_probs=80.9
Q ss_pred cceecCceEEEEEEECCCCeEEEEEEeeccCc--------cchHHHHHHHHHHhhcCCCChHHH----------------
Q 039228 79 LIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ--------GASKSFMAECKALKNICHRNLVRF---------------- 134 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l---------------- 134 (356)
.||+|+||.||+|.+. +..|++|....... ....++.+|+.++..+.|+++...
T Consensus 1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 4899999999999954 67899998643211 112457789999999987764321
Q ss_pred ---------H-----HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ---------I-----SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ---------~-----~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
+ .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGNDELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 1 68899999999999999 99999999999999 88999999999864
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.49 E-value=1.1e-13 Score=120.81 Aligned_cols=100 Identities=21% Similarity=0.213 Sum_probs=81.7
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccCcc--------chHHHHHHHHHHhhcCCCChHHH---------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG--------ASKSFMAECKALKNICHRNLVRF--------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l--------------- 134 (356)
+.||+|++|.||+|.+ .+..|++|+....... ....+.+|+.++..+.|+++...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5789999999999987 4678999986532211 12357789999999988776532
Q ss_pred ------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 ------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 ------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
..++.+++.+|.++|+.+ ++|+|++|.||+++ ++.++|+|||.+.
T Consensus 80 ~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~ 142 (211)
T PRK14879 80 YIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAE 142 (211)
T ss_pred EeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCccc
Confidence 267889999999999999 99999999999999 7889999999886
No 430
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.48 E-value=1.5e-13 Score=117.65 Aligned_cols=104 Identities=22% Similarity=0.183 Sum_probs=76.8
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeeccCcc--chHHH----------------------HHHHHHHhhcCCCC--
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQG--ASKSF----------------------MAECKALKNICHRN-- 130 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~E~~~l~~l~h~n-- 130 (356)
.+.||+|+||.||+|.+. +++.||||++...... ....+ ..|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 568999999999999987 6799999998643211 01111 24454444432221
Q ss_pred --------------------------h------HHHHHHHHHHHHHHHHHhh-cCCCcEEecCCCCCCeEeCCCCceEEc
Q 039228 131 --------------------------L------VRFISIAIDVASALDYLHH-HCQELILHCDPKPSNVLLDNDLFAHIG 177 (356)
Q Consensus 131 --------------------------i------v~l~~i~~~i~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~ 177 (356)
+ -....++.+++.++.++|. .+ |+|+||||+||+++ ++.++|+
T Consensus 81 ~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~~~~li 156 (187)
T cd05119 81 VPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DGKVYII 156 (187)
T ss_pred CCceEecCCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CCcEEEE
Confidence 0 1225588899999999999 88 99999999999999 8999999
Q ss_pred cccccccc
Q 039228 178 DFELARFR 185 (356)
Q Consensus 178 Dfg~a~~~ 185 (356)
|||.+...
T Consensus 157 Dfg~a~~~ 164 (187)
T cd05119 157 DVPQAVEI 164 (187)
T ss_pred ECcccccc
Confidence 99999643
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.46 E-value=1.2e-13 Score=137.25 Aligned_cols=109 Identities=20% Similarity=0.165 Sum_probs=84.9
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEe-ecc-Cc------cchHHHHHHHHHHhhcCCCChHHH-------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQ-CQ------GASKSFMAECKALKNICHRNLVRF------- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~-~~~-~~------~~~~~~~~E~~~l~~l~h~niv~l------- 134 (356)
....|...+.||+|+||.||+|.+... .+++|+. ... .. ...+++.+|+.++..++|++++..
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 344566788999999999999988644 3444432 111 11 123467899999999999987653
Q ss_pred ----------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ----------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ----------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
..++.+++.+|.+||+.+ ++||||||+||++ .++.++|+|||+++.
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 347789999999999999 9999999999999 578899999999974
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=4.7e-15 Score=147.50 Aligned_cols=220 Identities=23% Similarity=0.226 Sum_probs=156.6
Q ss_pred cCCCCccccceecCceEEEEEEECC-CCeEEEEEEeeccC--ccchHHHHHHHHHHhhcC-CCChHHH------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDL-NRAVVAIKVLSIQC--QGASKSFMAECKALKNIC-HRNLVRF------------ 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l------------ 134 (356)
...|.+.+.||.|+|+.|-...... ....+|+|.+.... .........|..+-..+. |+|++.+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3457788889999999998877633 34566777765443 223344556777777777 9999987
Q ss_pred ---------------------------HHHHHHHHHHHHHHh-hcCCCcEEecCCCCCCeEeCCCC-ceEEccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLH-HHCQELILHCDPKPSNVLLDNDL-FAHIGDFELARFR 185 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH-~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~ 185 (356)
-.++.|+..++.|+| +.+ +.|+||||+|.+++..+ .++++|||+|...
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence 236788999999999 888 99999999999999999 9999999999866
Q ss_pred ccCCCCCccCCCCccc-cccccchhhhcCC-CCCCccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHH
Q 039228 186 QEVSNPTQSSSNGVRR-TIGYTALDYDLGS-EVSTNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMD 263 (356)
Q Consensus 186 ~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 263 (356)
.... ..........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++...........|...... ..
T Consensus 176 ~~~~-g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~- 251 (601)
T KOG0590|consen 176 RNKN-GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGR--FT- 251 (601)
T ss_pred cccC-CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccc--cc-
Confidence 5421 11233344566 9999999999874 45678899999999999999999998665544333333222100 00
Q ss_pred HhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhcCCCcCCCCChHHHHH
Q 039228 264 IVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACSMGSSQDRMNVPNAVH 322 (356)
Q Consensus 264 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~~vl~ 322 (356)
..... .......++..+++..+|..|.+.+++-.
T Consensus 252 ---~~~~~----------------------~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 252 ---QLPWN----------------------SISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ---cCccc----------------------cCChhhhhcccccccCCchhccccccccc
Confidence 00000 11113457778888889999998777643
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.34 E-value=3.4e-12 Score=113.52 Aligned_cols=102 Identities=16% Similarity=0.141 Sum_probs=80.4
Q ss_pred ccce-ecCceEEEEEEECCCCeEEEEEEeeccC-------------ccchHHHHHHHHHHhhcCCCChH--HH-------
Q 039228 78 NLIG-VGSFDAVYQGVFDLNRAVVAIKVLSIQC-------------QGASKSFMAECKALKNICHRNLV--RF------- 134 (356)
Q Consensus 78 ~~lg-~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~niv--~l------- 134 (356)
..|| .||.|+||.+... +..++||.+.... ......+.+|+.++.+|+|++|. +.
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 7888899988775 6789999885321 12234678899999999887741 11
Q ss_pred ------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
...+.+++.+|.+||..| |+||||||.|||++.++.++|+|||.+..
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 124668999999999999 99999999999999889999999998863
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.29 E-value=1.3e-11 Score=100.82 Aligned_cols=104 Identities=23% Similarity=0.226 Sum_probs=83.8
Q ss_pred ccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCC--ChHHH-------------------
Q 039228 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR--NLVRF------------------- 134 (356)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l------------------- 134 (356)
+.+.||.|.++.||++.... ..+++|....... ...+..|+.++..++|. +++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 45689999999999999863 7899999865433 45688899998888753 44433
Q ss_pred -----------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -----------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -----------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
..++.+++.+|++||......++|+|++|.||+++..+.+++.|||.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 78 ETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred eecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 3467789999999998533349999999999999998999999999886
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=2.4e-11 Score=108.53 Aligned_cols=102 Identities=19% Similarity=0.312 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCC
Q 039228 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSE 215 (356)
Q Consensus 136 ~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 215 (356)
+|+.||+.||.|||+. .++|+|+++..+.|++..+|-+|++--.....-...............+-++|.+||+-....
T Consensus 180 kw~tqIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn 258 (458)
T KOG1266|consen 180 KWCTQILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTN 258 (458)
T ss_pred HHHHHHHhhhhhhhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccc
Confidence 4888999999999997 588999999999999999998887532221110000001111222344567899999877777
Q ss_pred CCCccchHhHHHHHHHHHcCCCC
Q 039228 216 VSTNGDAYNYGILLLEMVTRRKP 238 (356)
Q Consensus 216 ~~~~sDiwSlG~~l~elltg~~P 238 (356)
.+..+|||+||....+|..|..-
T Consensus 259 ~~~a~dIy~fgmcAlemailEiq 281 (458)
T KOG1266|consen 259 TTGASDIYKFGMCALEMAILEIQ 281 (458)
T ss_pred cccchhhhhhhHHHHHHHHheec
Confidence 78899999999999999988764
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21 E-value=7.5e-12 Score=120.01 Aligned_cols=164 Identities=25% Similarity=0.249 Sum_probs=123.5
Q ss_pred CCCcccccee--cCceEEEEEEE--CCCCeEEEEEEeecc--CccchHHHHHHHHHHhhcC-CCChHHH-----------
Q 039228 73 GFPLINLIGV--GSFDAVYQGVF--DLNRAVVAIKVLSIQ--CQGASKSFMAECKALKNIC-HRNLVRF----------- 134 (356)
Q Consensus 73 ~~~~~~~lg~--G~~g~Vy~~~~--~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l----------- 134 (356)
.|.+.+.+|. |.+|.||.+.. ..+...+|+|.-+.. ......+=.+|+.....++ |+|.++.
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4677888999 99999999998 778899999984322 2222333345555555554 7777764
Q ss_pred --------------------------HHHHHHHHH----HHHHHhhcCCCcEEecCCCCCCeEeCCC-CceEEccccccc
Q 039228 135 --------------------------ISIAIDVAS----ALDYLHHHCQELILHCDPKPSNVLLDND-LFAHIGDFELAR 183 (356)
Q Consensus 135 --------------------------~~i~~~i~~----aL~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~a~ 183 (356)
+.++.+... ||.++|+.. ++|-|+||.||++..+ ...+++|||+..
T Consensus 195 iqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 195 IQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred eeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcceeE
Confidence 446667777 999999998 9999999999999988 899999999998
Q ss_pred ccccCCCCCc-cCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCC
Q 039228 184 FRQEVSNPTQ-SSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPID 240 (356)
Q Consensus 184 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~ 240 (356)
.+........ .......|...|++||...+ -++..+|+|++|.++.+..+|..+..
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhccccc
Confidence 7655442211 11123356778999998854 57889999999999999998877653
No 437
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.15 E-value=7.5e-10 Score=107.64 Aligned_cols=139 Identities=17% Similarity=0.234 Sum_probs=103.0
Q ss_pred EEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHHHH--------------------------------H
Q 039228 90 QGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRFIS--------------------------------I 137 (356)
Q Consensus 90 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~--------------------------------i 137 (356)
.|..+.++.+|.|...+...........+-++.|+.++||||+++++ .
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~Pl~~~lk~l~~~~v~~G 109 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRPLETVLKELGKEEVCLG 109 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccccHHHHHHHhHHHHHHHH
Confidence 46666778899999887665544455777889999999999999832 3
Q ss_pred HHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCC
Q 039228 138 AIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVS 217 (356)
Q Consensus 138 ~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 217 (356)
+.||+.||.|||+.+ .++|++|.-+.|+++..|..||++|.++........ .......-..|..|+.+....
T Consensus 110 l~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~----~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 110 LFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA----PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc----ccccchhhhcccChhhcCccc--
Confidence 568999999999765 499999999999999999999999998864432221 111112223456666543322
Q ss_pred CccchHhHHHHHHHHHcCC
Q 039228 218 TNGDAYNYGILLLEMVTRR 236 (356)
Q Consensus 218 ~~sDiwSlG~~l~elltg~ 236 (356)
...|.|-||++++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 3459999999999999993
No 438
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.05 E-value=5.3e-09 Score=96.80 Aligned_cols=186 Identities=15% Similarity=0.094 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhc--
Q 039228 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDL-- 212 (356)
Q Consensus 135 ~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-- 212 (356)
+.+++.++.+.+-||++| .+-+|+.++|+|+++++.+.|.|-..-..- .+.......+|...|.+||...
T Consensus 120 lrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~-----~ng~~~~cpVg~~eftPPElQ~~~ 191 (637)
T COG4248 120 LRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQIN-----ANGTLHLCPVGVSEFTPPELQTLP 191 (637)
T ss_pred HHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeec-----cCCceEecccCccccCCHHHhccc
Confidence 668889999999999999 999999999999999999999875443221 1123344567888999999765
Q ss_pred ---CCCCCCccchHhHHHHHHHHHcC-CCCCCccccCCc---cHH-HHHHHhCCCchHHHhhhhhccccccccccccchh
Q 039228 213 ---GSEVSTNGDAYNYGILLLEMVTR-RKPIDFMFEGDL---NLH-NFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNML 284 (356)
Q Consensus 213 ---~~~~~~~sDiwSlG~~l~elltg-~~Pf~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 284 (356)
+..-+...|.|.||+++++++.| +.||.+...... ... ......+...-. ....+... +.
T Consensus 192 sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~--~~~g~~p~--------P~-- 259 (637)
T COG4248 192 SFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASD--QRRGLKPP--------PR-- 259 (637)
T ss_pred cccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechh--ccCCCCCC--------CC--
Confidence 34456788999999999999886 999987543221 111 111111110000 00000000 00
Q ss_pred hhhchhhHHHHHHHHHHHHHhhcCC--CcCCCCChHHHHHHHHHhhhhhcc--ccccccCCcCC
Q 039228 285 RKTKMNSRLECLIFMVRIGAACSMG--SSQDRMNVPNAVHDLQSVNNILLP--ETVFKSLTNNR 344 (356)
Q Consensus 285 ~~~~~~~~~~~~~~l~~l~~~Cl~~--dP~~RPs~~~vl~~L~~i~~~~~~--~~~~~~~~~~~ 344 (356)
+... .-.+..+..+..+|+.. ++.-|||++..+..|.++.+++.+ ...+-.++++.
T Consensus 260 -~~P~---~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~H~y~~hl 319 (637)
T COG4248 260 -SIPL---SMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAMHVYPVHL 319 (637)
T ss_pred -CCCh---hhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhcccccccCCC
Confidence 0000 01222456677888765 367899999999999999998844 34433355544
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.04 E-value=9.7e-10 Score=106.21 Aligned_cols=47 Identities=21% Similarity=0.244 Sum_probs=39.0
Q ss_pred HHHHHHH-HHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 137 IAIDVAS-ALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 137 i~~~i~~-aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
++..++. .+..+|..| ++|+|++|.||+++.++.++++|||++..+.
T Consensus 261 ia~~~~~~~l~ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 261 LAENLARSFLNQVLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHHHHHHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 3444444 467889988 9999999999999999999999999997553
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.00 E-value=9.4e-10 Score=92.30 Aligned_cols=103 Identities=19% Similarity=0.111 Sum_probs=78.1
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH----------------------
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF---------------------- 134 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l---------------------- 134 (356)
.+.|+.|.++.||++... +..|++|+...... ....+..|+.+++.+.+.++++-
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELL 79 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccc
Confidence 457899999999999875 67899999754322 12345678888888765444321
Q ss_pred ------HHHHHHHHHHHHHHhhcC--CCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 ------ISIAIDVASALDYLHHHC--QELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 ------~~i~~~i~~aL~~LH~~~--~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
..++.+++.+|+.||..+ ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 80 ~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 80 TEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 235678999999999986 11259999999999999 6689999999885
No 441
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.93 E-value=4.7e-10 Score=109.39 Aligned_cols=162 Identities=15% Similarity=0.250 Sum_probs=101.3
Q ss_pred hhcCCCCccccceecCce---EEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCC-ChHHH----HHHHHH
Q 039228 69 KATDGFPLINLIGVGSFD---AVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHR-NLVRF----ISIAID 140 (356)
Q Consensus 69 ~~~~~~~~~~~lg~G~~g---~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l----~~i~~~ 140 (356)
....+|+..+.+|..+-| .+|.+.....+.....|..-. ..+.....-+++++|. ++.+- +.=+.+
T Consensus 34 ~~~~~~~~~~~~~~~g~g~~~~ly~~~~~~sk~~~~~~s~~~------~~ld~~~~~~~~lr~~~~vs~aTe~~f~nl~~ 107 (700)
T KOG2137|consen 34 KESQSYRSLNQVGSAGPGDAWKLYAGKKSGSKAPTLKKSAVV------WMLDKRASSLQQLRGLDGVSKATEDGFANLGN 107 (700)
T ss_pred ccccccccccceeecCCCchhhhhhhhccCccCccccceeee------eecChhhhHHHHHhcccchhhcccHhhhhhhc
Confidence 446678887777765544 566666554444432221110 0011112223333331 11111 222334
Q ss_pred HHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC-----CCccCCCCccccccccchhhhcCCC
Q 039228 141 VASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN-----PTQSSSNGVRRTIGYTALDYDLGSE 215 (356)
Q Consensus 141 i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~ 215 (356)
++.||.|+|... .+||++|.|++|.++.++..||+.|+++........ ..............|.|||++.+..
T Consensus 108 v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 108 VADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred ccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 668999999865 499999999999999999999999999865433111 1111222233456799999999988
Q ss_pred CCCccchHhHHHHHHHHHcCCCC
Q 039228 216 VSTNGDAYNYGILLLEMVTRRKP 238 (356)
Q Consensus 216 ~~~~sDiwSlG~~l~elltg~~P 238 (356)
.+.++|+||+|+++|.+..|..+
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~ 208 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKS 208 (700)
T ss_pred ccccccceeeeeEEEEEecCCcc
Confidence 89999999999999999954443
No 442
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.84 E-value=1e-08 Score=100.65 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=30.7
Q ss_pred CCCCccccceecCceEEEEEEECCCCeEEEEEEeec
Q 039228 72 DGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSI 107 (356)
Q Consensus 72 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~ 107 (356)
..|+. +.||+|++|+||+|+.+.+|+.||||+...
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP 154 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRP 154 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCc
Confidence 35776 789999999999999998789999999863
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.84 E-value=2.3e-09 Score=103.13 Aligned_cols=163 Identities=21% Similarity=0.204 Sum_probs=114.8
Q ss_pred HHhhcCCCCccccceecCceEEEEEEEC-CCCeEEEEEEeeccCccchHH--HHHHHHHHhhcC-CCChHHH--------
Q 039228 67 LLKATDGFPLINLIGVGSFDAVYQGVFD-LNRAVVAIKVLSIQCQGASKS--FMAECKALKNIC-HRNLVRF-------- 134 (356)
Q Consensus 67 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~l-------- 134 (356)
....+.+|..+..||.|.|+.|+..... .++..|++|.+.........+ -..|+.+...+. |.+++.+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3445678999999999999999988765 678899999876443322222 123444444332 4444442
Q ss_pred -----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCC-CceEEcccccccc
Q 039228 135 -----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDND-LFAHIGDFELARF 184 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~a~~ 184 (356)
+.+..+++.++.++|+.. ++|+|++|+||++..+ +..+++|||.+..
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccc
Confidence 456778999999999988 9999999999999876 8889999999864
Q ss_pred cccCCCCCccCCCCccccccc-cchhhhcCCCCCCccchHhHHHHHHHHHcCCCC
Q 039228 185 RQEVSNPTQSSSNGVRRTIGY-TALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238 (356)
Q Consensus 185 ~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~P 238 (356)
+...... ....+..| .++.......+..+.|++|||..+.+..+|..-
T Consensus 417 ~~~~~~~------~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 417 LAFSSGV------FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred cceeccc------ccccccccccchhhccccccccccccccccccccccccCccc
Confidence 3221110 01112233 355555667788999999999999999998654
No 444
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.79 E-value=2.2e-08 Score=85.78 Aligned_cols=104 Identities=20% Similarity=0.137 Sum_probs=74.7
Q ss_pred cccceecCceEEEEEEECC------CCeEEEEEEeeccC------------c----------cchHHH----HHHHHHHh
Q 039228 77 INLIGVGSFDAVYQGVFDL------NRAVVAIKVLSIQC------------Q----------GASKSF----MAECKALK 124 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~------~~~~vavK~~~~~~------------~----------~~~~~~----~~E~~~l~ 124 (356)
...||.|--+.||.|.... .+..+|||+++... . ...+.+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998653 24799999985321 0 001122 26888888
Q ss_pred hcCCCC-----hH------------------------------HHHHHHHHHHHHHHHH-hhcCCCcEEecCCCCCCeEe
Q 039228 125 NICHRN-----LV------------------------------RFISIAIDVASALDYL-HHHCQELILHCDPKPSNVLL 168 (356)
Q Consensus 125 ~l~h~n-----iv------------------------------~l~~i~~~i~~aL~~L-H~~~~~~iiH~Dlkp~NIll 168 (356)
++.--+ ++ .+..+..+++.+|..| |..+ |||+||++.||++
T Consensus 82 rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~~NIL~ 158 (197)
T cd05146 82 RMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLSEYNMLW 158 (197)
T ss_pred HHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence 774211 00 0134567899999988 8888 9999999999999
Q ss_pred CCCCceEEcccccccc
Q 039228 169 DNDLFAHIGDFELARF 184 (356)
Q Consensus 169 ~~~~~~kl~Dfg~a~~ 184 (356)
+ ++.+.|+|||.+..
T Consensus 159 ~-~~~v~iIDF~qav~ 173 (197)
T cd05146 159 H-DGKVWFIDVSQSVE 173 (197)
T ss_pred E-CCcEEEEECCCcee
Confidence 7 46799999998853
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.78 E-value=2.4e-09 Score=108.53 Aligned_cols=170 Identities=21% Similarity=0.232 Sum_probs=118.1
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccC---ccchHHHHHHHHHHhhcCCCChHHH------------
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC---QGASKSFMAECKALKNICHRNLVRF------------ 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l------------ 134 (356)
..+++.+.+.+-+|.++.++.+.-..++...++|+..... ....+....+-.++-...+|.+++.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4567888889999999999988776666555555543211 1111222222222222233333321
Q ss_pred -------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCC
Q 039228 135 -------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVS 189 (356)
Q Consensus 135 -------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 189 (356)
......+..+++|||... ++|+|++|.|+++..++..+++|||.........
T Consensus 882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccccccc
Confidence 124456788999999987 8999999999999999999999998443221100
Q ss_pred ----------------------CC-----CccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCCCcc
Q 039228 190 ----------------------NP-----TQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPIDFM 242 (356)
Q Consensus 190 ----------------------~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf~~~ 242 (356)
.. .........+|+.|.+||...+......+|+|++|++++|.++|.+||+..
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 00 012234567899999999999999999999999999999999999999743
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.46 E-value=9e-07 Score=73.91 Aligned_cols=101 Identities=21% Similarity=0.235 Sum_probs=72.4
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEe-eccCc--c-----chHHHHHHHHHHhhcCC-----CChHHH----------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQCQ--G-----ASKSFMAECKALKNICH-----RNLVRF---------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~-~~~~~--~-----~~~~~~~E~~~l~~l~h-----~niv~l---------- 134 (356)
..+++|+-+.+|.+.+. +..+++|.= ++.-. . ...+..+|++++.++.- |-+.-+
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999999775 445666653 22111 1 12345678888887642 211110
Q ss_pred ---------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ---------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ---------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
..++..+-.-+.-||..| |||+||.++||++..++ +.++|||++.+
T Consensus 80 ~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEARPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhcchHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 357788888999999999 99999999999998765 88999999963
No 447
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.42 E-value=5.6e-06 Score=78.96 Aligned_cols=130 Identities=18% Similarity=0.233 Sum_probs=100.5
Q ss_pred ceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHHH------------------------------
Q 039228 85 FDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVRF------------------------------ 134 (356)
Q Consensus 85 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l------------------------------ 134 (356)
-.+.|++....+|..|++|+++............-++..+++.|+|+|++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35789999999999999999964433333334455788999999999998
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQE 187 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 187 (356)
+.++.|+..||.++|+.| +.-+-|.+.+|+++.+.+++|+..|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 568899999999999999 88899999999999998999987777654432
Q ss_pred CCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCC
Q 039228 188 VSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKP 238 (356)
Q Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~P 238 (356)
... +.+.. -.+-|.=.||.+++.|.||..-
T Consensus 446 d~~------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT------------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC------------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 210 11111 1345888999999999999654
No 448
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.33 E-value=1.9e-06 Score=71.89 Aligned_cols=103 Identities=27% Similarity=0.310 Sum_probs=76.2
Q ss_pred ccccceecCceEEEEEEECCCCeEEEEEEe-eccC-------ccchHHHHHHHHHHhhcC-----CCChHH---------
Q 039228 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVL-SIQC-------QGASKSFMAECKALKNIC-----HRNLVR--------- 133 (356)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~-~~~~-------~~~~~~~~~E~~~l~~l~-----h~niv~--------- 133 (356)
....|-+|+-+.|+++.+. |+...||.- .+.. .-..++..+|+++|.++. -|-+.-
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 5678999999999999987 677777753 2221 112356778998888763 222111
Q ss_pred ------------H--------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC---ceEEccccccc
Q 039228 134 ------------F--------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL---FAHIGDFELAR 183 (356)
Q Consensus 134 ------------l--------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~a~ 183 (356)
+ ..++..|-..+.-||..+ |||+||..+||++..++ .+.++|||++.
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchh
Confidence 1 357788999999999999 99999999999996544 45899999985
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.23 E-value=1.4e-05 Score=68.08 Aligned_cols=92 Identities=22% Similarity=0.232 Sum_probs=62.3
Q ss_pred EEEEEEECCCCeEEEEEEeeccC--------------c-------c-----chHHHHHHHHHHhhcCCCCh--HHH----
Q 039228 87 AVYQGVFDLNRAVVAIKVLSIQC--------------Q-------G-----ASKSFMAECKALKNICHRNL--VRF---- 134 (356)
Q Consensus 87 ~Vy~~~~~~~~~~vavK~~~~~~--------------~-------~-----~~~~~~~E~~~l~~l~h~ni--v~l---- 134 (356)
.||.|.... +..+|||+..... . . ......+|.+.|.++..-++ .+.
T Consensus 1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 389998854 5899999985320 0 0 01245679999999875432 221
Q ss_pred -----------------------------HHHHHHHHHHHHH-HhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -----------------------------ISIAIDVASALDY-LHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -----------------------------~~i~~~i~~aL~~-LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
..++.+++..+.. +|..| |+|+||.+.||+++++ .+.|+|||.+.
T Consensus 80 ~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iIDf~qav 154 (188)
T PF01163_consen 80 RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIIDFGQAV 154 (188)
T ss_dssp TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--GTTEE
T ss_pred CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEecCcce
Confidence 3466777775555 57888 9999999999999987 89999999885
No 450
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.15 E-value=1.1e-05 Score=70.27 Aligned_cols=105 Identities=17% Similarity=0.186 Sum_probs=77.4
Q ss_pred ccceecCceEEEEEEECCCCeEEEEEEeeccCc-cchHHHHHHHHHHhhcCCCCh--HHH--------------------
Q 039228 78 NLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ-GASKSFMAECKALKNICHRNL--VRF-------------------- 134 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~ni--v~l-------------------- 134 (356)
+.|+.|.++.||++.... |..+++|....... .....+..|+.++..+.+.++ .++
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999998754 47899999764322 134567889998888764221 211
Q ss_pred -------------------HHHHHHHHHHHHHHhhcC-------------------------------------------
Q 039228 135 -------------------ISIAIDVASALDYLHHHC------------------------------------------- 152 (356)
Q Consensus 135 -------------------~~i~~~i~~aL~~LH~~~------------------------------------------- 152 (356)
..++.+++.+|..||+..
T Consensus 83 ~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (223)
T cd05154 83 DGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLR 162 (223)
T ss_pred CCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 145778888999988531
Q ss_pred ----------CCcEEecCCCCCCeEeCC--CCceEEccccccc
Q 039228 153 ----------QELILHCDPKPSNVLLDN--DLFAHIGDFELAR 183 (356)
Q Consensus 153 ----------~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~a~ 183 (356)
...++|+|+.|.||+++. ++.+.|+||+.+.
T Consensus 163 ~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 163 WLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 123799999999999998 6678999999885
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.00 E-value=3.7e-05 Score=68.19 Aligned_cols=106 Identities=20% Similarity=0.129 Sum_probs=75.8
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccCc----------------------cchHHHHHHHHHHhhcCCC-
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQ----------------------GASKSFMAECKALKNICHR- 129 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~- 129 (356)
-..+...||.|.-+.||.|.... +..+|||.-..... -......+|.++|.+|...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~-g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPK-GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECCC-CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 35677899999999999999874 58999997532110 0112346788888888422
Q ss_pred -ChHHH----------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccc
Q 039228 130 -NLVRF----------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFE 180 (356)
Q Consensus 130 -niv~l----------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 180 (356)
.+.+. -.++..|+.-+.-+-..| |||+|+++-||+++++|.+.++||=
T Consensus 171 ~~VP~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg~~~vIDwP 247 (304)
T COG0478 171 VKVPKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDGDIVVIDWP 247 (304)
T ss_pred CCCCCccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecCCCEEEEeCc
Confidence 11111 235556666666555778 9999999999999999999999996
Q ss_pred cc
Q 039228 181 LA 182 (356)
Q Consensus 181 ~a 182 (356)
-+
T Consensus 248 Q~ 249 (304)
T COG0478 248 QA 249 (304)
T ss_pred cc
Confidence 55
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.90 E-value=5.2e-05 Score=68.47 Aligned_cols=45 Identities=27% Similarity=0.214 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCC-------CCceEEccccccc
Q 039228 136 SIAIDVASALDYLHHHCQELILHCDPKPSNVLLDN-------DLFAHIGDFELAR 183 (356)
Q Consensus 136 ~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-------~~~~kl~Dfg~a~ 183 (356)
.++.+++..+.-||..| |+|+|++++|||++. ++.+.|+||+.+.
T Consensus 142 ~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 142 MLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 35567899999999999 999999999999975 4688999999885
No 453
>PRK09902 hypothetical protein; Provisional
Probab=97.88 E-value=4.7e-05 Score=65.67 Aligned_cols=100 Identities=13% Similarity=0.075 Sum_probs=75.1
Q ss_pred ceecCceEEEEEEECCCCeEEEEEEeeccC------ccchHHHHHHHHHHhhcCCCChH--HH-----------------
Q 039228 80 IGVGSFDAVYQGVFDLNRAVVAIKVLSIQC------QGASKSFMAECKALKNICHRNLV--RF----------------- 134 (356)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv--~l----------------- 134 (356)
-|+||.+-|+..... |..+-+|.-.... .-....|.+|+..|.+|..-++. +.
T Consensus 26 ~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence 478999999997765 3467778753110 22456899999999888532222 11
Q ss_pred ---------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCc--eEEcccccccc
Q 039228 135 ---------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLF--AHIGDFELARF 184 (356)
Q Consensus 135 ---------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 184 (356)
-.++.+++..+.-||..| +.|+|+.+.||+++..+. +.++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 146778999999999999 999999999999986666 89999987763
No 454
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.61 E-value=0.00057 Score=60.08 Aligned_cols=124 Identities=21% Similarity=0.192 Sum_probs=81.6
Q ss_pred hcccCChhhHHHHHhhcCCCCccccce---ecCceEEEEEEECCCCeEEEEEEeeccCccc-------------------
Q 039228 55 LRNAIPKEYYESLLKATDGFPLINLIG---VGSFDAVYQGVFDLNRAVVAIKVLSIQCQGA------------------- 112 (356)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~lg---~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~------------------- 112 (356)
...-+...+...+....++..+....| .|.-+.||+|... ++..+|+|++.......
T Consensus 28 ~~~v~D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~ 106 (268)
T COG1718 28 VDEVFDKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSN 106 (268)
T ss_pred hhhhhhhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCC
Confidence 334455566666666666666666555 5666689998863 46899999996432111
Q ss_pred hH-----HHHHHHHHHhhcCCC------------ChHH-----------------------HHHHHHHHHHHHHHHhh-c
Q 039228 113 SK-----SFMAECKALKNICHR------------NLVR-----------------------FISIAIDVASALDYLHH-H 151 (356)
Q Consensus 113 ~~-----~~~~E~~~l~~l~h~------------niv~-----------------------l~~i~~~i~~aL~~LH~-~ 151 (356)
.. ....|+.-|+++.-. |++- ...+..+++..+.-|-. .
T Consensus 107 rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a 186 (268)
T COG1718 107 RRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEA 186 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhc
Confidence 01 123466666655211 1110 03456677777777766 6
Q ss_pred CCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 152 CQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 152 ~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
+ +||+||+.-|||+. ++.+.|+|||-|.
T Consensus 187 ~---LVHgDLSEyNiL~~-~~~p~iID~~QaV 214 (268)
T COG1718 187 G---LVHGDLSEYNILVH-DGEPYIIDVSQAV 214 (268)
T ss_pred C---cccccchhhheEEE-CCeEEEEECcccc
Confidence 6 99999999999999 8899999999885
No 455
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.58 E-value=1.8e-05 Score=77.33 Aligned_cols=150 Identities=15% Similarity=0.062 Sum_probs=110.2
Q ss_pred cCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCC-hHHH---------------
Q 039228 71 TDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRN-LVRF--------------- 134 (356)
Q Consensus 71 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l--------------- 134 (356)
+..+...+-+++|+++.+++.+...+...+ .+.+... .....++++|.+++||| .++.
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~ 314 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMR 314 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhh
Confidence 344556667899999999998876553333 5554422 34456889999999999 4433
Q ss_pred ------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccccCCC
Q 039228 135 ------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSN 190 (356)
Q Consensus 135 ------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 190 (356)
..+++.-+.+|++||+.. =+|+| ||+..+ +..+.+||+....+....
T Consensus 315 i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~- 385 (829)
T KOG0576|consen 315 ICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM- 385 (829)
T ss_pred hhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc-
Confidence 124445667899999864 48888 777654 678999999887554322
Q ss_pred CCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcCCCCC
Q 039228 191 PTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTRRKPI 239 (356)
Q Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg~~Pf 239 (356)
......+++.++|||+...+.+....|.|++|+--.+|.-|.+|-
T Consensus 386 ----~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 386 ----KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ----ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 344577899999999999999999999999998777887777764
No 456
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.51 E-value=0.00037 Score=68.47 Aligned_cols=36 Identities=28% Similarity=0.425 Sum_probs=31.2
Q ss_pred HhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccccc
Q 039228 148 LHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFRQ 186 (356)
Q Consensus 148 LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 186 (356)
+-..| +.|.|..|.||+++.+|.+.+.|||+...+.
T Consensus 281 ~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 281 LLRDG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHhcC---ccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 33456 9999999999999999999999999987553
No 457
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.49 E-value=0.00011 Score=63.87 Aligned_cols=47 Identities=32% Similarity=0.388 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCC---ceEEcccccccc
Q 039228 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDL---FAHIGDFELARF 184 (356)
Q Consensus 135 ~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~a~~ 184 (356)
-.++.+++..+.-||..| |+|+|+++.|||++.++ .+.|+||+.++.
T Consensus 121 ~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 121 RELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 567889999999999999 99999999999999877 889999998764
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.44 E-value=0.0011 Score=57.57 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=70.7
Q ss_pred hcCCCCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHH---------HHHHHHHhhcC---CCChHHH---
Q 039228 70 ATDGFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSF---------MAECKALKNIC---HRNLVRF--- 134 (356)
Q Consensus 70 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~E~~~l~~l~---h~niv~l--- 134 (356)
..++|.+.+++-......|.+-... +..+++|..........+.| .+.+..+.+++ -..+..+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 4567888888888877777766654 68899998764332221111 12222222221 1111111
Q ss_pred -------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 135 -------------------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 135 -------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
-.+...+..++.-||..| +.|+|..|.|+++++++ +++.||+..+
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IRIIDTQGKR 182 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchhcCHHHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EEEEECcccc
Confidence 023456889999999999 99999999999999655 8899998765
No 459
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.24 E-value=0.0017 Score=54.19 Aligned_cols=104 Identities=23% Similarity=0.246 Sum_probs=70.1
Q ss_pred CCccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcCCCChHH-----------H--------
Q 039228 74 FPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNICHRNLVR-----------F-------- 134 (356)
Q Consensus 74 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-----------l-------- 134 (356)
....+.|++|.+|.||++.+. |..+|+|+=... .....+..|+++|..+..-++.+ +
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L 99 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhhhcccccEEEEeecc--CceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcch
Confidence 345678999999999999987 668999985432 33467888999888776433221 1
Q ss_pred ---H-----HHHHHHHHHHHHHhhcCCCcEEecCCC-CCCeEeCCCCceEEcccccccc
Q 039228 135 ---I-----SIAIDVASALDYLHHHCQELILHCDPK-PSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ---~-----~i~~~i~~aL~~LH~~~~~~iiH~Dlk-p~NIll~~~~~~kl~Dfg~a~~ 184 (356)
. .-...++.+---|-..| |-|..|. |..++|..++.+.|+||..|+.
T Consensus 100 ~~~~~~~~rk~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIGGDRKHLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhcccHHHHHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 1 11233444444455666 8888886 4445555555899999999874
No 460
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.07 E-value=0.0025 Score=54.64 Aligned_cols=101 Identities=25% Similarity=0.378 Sum_probs=73.1
Q ss_pred CCCCccccceecCc-eEEEEEEECCCCeEEEEEEeec---cCc------------------cchHHHHHHHHHHhhcC--
Q 039228 72 DGFPLINLIGVGSF-DAVYQGVFDLNRAVVAIKVLSI---QCQ------------------GASKSFMAECKALKNIC-- 127 (356)
Q Consensus 72 ~~~~~~~~lg~G~~-g~Vy~~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~E~~~l~~l~-- 127 (356)
.+++.++.||.|.. |.||++... |+.+|+|++.. ... ....-|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 67999999999999 999999987 78999999421 100 11224667777666554
Q ss_pred -CCCh--HHH------------------------------------------HHHHHHHHHHHHHHhhcCCCcEEecCCC
Q 039228 128 -HRNL--VRF------------------------------------------ISIAIDVASALDYLHHHCQELILHCDPK 162 (356)
Q Consensus 128 -h~ni--v~l------------------------------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlk 162 (356)
+.++ |+. ..-+.+|.+-|..+|..| |+-+|++
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~~~~~~~~~~~~~dl~~~~k~g---I~~~Dv~ 191 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDPPLQIRDIPQMLRDLKILHKLG---IVPRDVK 191 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCccccchhHHHHHHHHHHHHHHCC---eeeccCc
Confidence 2233 222 123456888899999999 9999999
Q ss_pred CCCeEeCCCCceEEcccccc
Q 039228 163 PSNVLLDNDLFAHIGDFELA 182 (356)
Q Consensus 163 p~NIll~~~~~~kl~Dfg~a 182 (356)
+.|.. .-+|+|||.+
T Consensus 192 ~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 192 PRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ccccc-----CCEEEecccC
Confidence 99987 3478999865
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=96.99 E-value=0.0037 Score=54.63 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=35.4
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC 127 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 127 (356)
++.|+.|..+.||+..... ..+++|..... .....+..|..+++.+.
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~ 48 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLA 48 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHH
Confidence 4578999999999999874 48899997543 34456777888777764
No 462
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=96.97 E-value=0.0036 Score=55.14 Aligned_cols=27 Identities=19% Similarity=0.026 Sum_probs=24.8
Q ss_pred EEecCCCCCCeEeCCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
++|+|+.|.||++++++ +.|+||+.+.
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 78999999999999888 9999999875
No 463
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=96.68 E-value=0.006 Score=54.71 Aligned_cols=27 Identities=26% Similarity=0.310 Sum_probs=24.5
Q ss_pred EEecCCCCCCeEeCCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
++|+|+.|.||++++++ +.|+||+.+.
T Consensus 148 l~H~Dl~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 148 PLHMDVHAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred eecCCCCcCcEEEeCCC-CEEEeccccC
Confidence 79999999999999877 7899999885
No 464
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.54 E-value=0.012 Score=62.06 Aligned_cols=164 Identities=15% Similarity=0.144 Sum_probs=103.6
Q ss_pred HHHHHHHHhhcCCCChHHH-----------------------------------------HHHHHHHHHHHHHHhhcCCC
Q 039228 116 FMAECKALKNICHRNLVRF-----------------------------------------ISIAIDVASALDYLHHHCQE 154 (356)
Q Consensus 116 ~~~E~~~l~~l~h~niv~l-----------------------------------------~~i~~~i~~aL~~LH~~~~~ 154 (356)
...|...+..+.|+|++.+ ..+..++..||.|+|+..
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~-- 306 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLS-- 306 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhc--
Confidence 3456777888899999876 225567889999999985
Q ss_pred cEEecCCCCC---CeEeCCCCceEEc--ccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCc--cchHhHHH
Q 039228 155 LILHCDPKPS---NVLLDNDLFAHIG--DFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTN--GDAYNYGI 227 (356)
Q Consensus 155 ~iiH~Dlkp~---NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~--sDiwSlG~ 227 (356)
..|.-+..+ +.-.+..+.+.++ ||+..+.+...... .....+..+.++|......+..+ .|+|.+|.
T Consensus 307 -l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~-----~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgl 380 (1351)
T KOG1035|consen 307 -LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS-----FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGL 380 (1351)
T ss_pred -cceeEEecccccccccCccceeecchhhhcccccCCCcccc-----hhhcCccccccccccccccchhhhhhHHHHHHH
Confidence 555544444 3444556666666 88887755432211 11222445677777766555444 69999999
Q ss_pred HHHHHHcCCCCCCccccCCccHHHHHHHhCCCchHHHhhhhhccccccccccccchhhhhchhhHHHHHHHHHHHHHhhc
Q 039228 228 LLLEMVTRRKPIDFMFEGDLNLHNFARMAFPNRVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLECLIFMVRIGAACS 307 (356)
Q Consensus 228 ~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl 307 (356)
....+..|..+-... .....+++.. ....+......|+
T Consensus 381 l~~~~~~~~~i~~~~----------------~~~~~~l~~~--------------------------~~~~~~d~~~~~~ 418 (1351)
T KOG1035|consen 381 LLLQLSQGEDISEKS----------------AVPVSLLDVL--------------------------STSELLDALPKCL 418 (1351)
T ss_pred HHhhhhhcCcccccc----------------cchhhhhccc--------------------------cchhhhhhhhhhc
Confidence 999998876652210 0001111110 0003457788999
Q ss_pred CCCcCCCCChHHHHHHHHHhhh
Q 039228 308 MGSSQDRMNVPNAVHDLQSVNN 329 (356)
Q Consensus 308 ~~dP~~RPs~~~vl~~L~~i~~ 329 (356)
..++++|+++.+++...-.-..
T Consensus 419 ~~~~~~Rl~~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 419 DEDSEERLSALELLTHPFLRFP 440 (1351)
T ss_pred chhhhhccchhhhhhchhcccc
Confidence 9999999999999987644333
No 465
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=96.40 E-value=0.018 Score=50.69 Aligned_cols=29 Identities=21% Similarity=0.302 Sum_probs=25.8
Q ss_pred cEEecCCCCCCeEeCC-CCceEEccccccc
Q 039228 155 LILHCDPKPSNVLLDN-DLFAHIGDFELAR 183 (356)
Q Consensus 155 ~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 183 (356)
.++|+|+.+.|||++. ++.+.|+||..|.
T Consensus 171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred EEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 3899999999999997 5789999998874
No 466
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.06 E-value=0.02 Score=52.46 Aligned_cols=28 Identities=36% Similarity=0.510 Sum_probs=25.6
Q ss_pred EEecCCCCCCeEeCCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
++|+|+.|.||++++++.+.|.||+.+.
T Consensus 177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 177 VIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CCccCcCcccEEEeCCceEEEeehhhhc
Confidence 8999999999999988777899999874
No 467
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=95.79 E-value=0.02 Score=52.60 Aligned_cols=106 Identities=19% Similarity=0.200 Sum_probs=72.4
Q ss_pred CCCccccceecCceEEEEEEECCCCeEEEEEEeeccC-----------------ccc---h--HHHHHHHHHHhhcC---
Q 039228 73 GFPLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC-----------------QGA---S--KSFMAECKALKNIC--- 127 (356)
Q Consensus 73 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----------------~~~---~--~~~~~E~~~l~~l~--- 127 (356)
-+.+++.||-|.-+-||.+.+.. |++.++|.-.... ... . -...+|...|+.|.
T Consensus 93 v~svGnqIGVGKESDIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 46788899999999999998865 4788888643110 000 0 12345777777662
Q ss_pred -----------CCChHHH---------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccc
Q 039228 128 -----------HRNLVRF---------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFEL 181 (356)
Q Consensus 128 -----------h~niv~l---------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 181 (356)
|--|..+ -.++..+..-+--|.++| +||+|..--||++++++.++++||=-
T Consensus 172 fpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~la~~G---lIHgDFNEFNimv~dd~~i~vIDFPQ 248 (465)
T KOG2268|consen 172 FPVPKPIDHNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGLIVRLANHG---LIHGDFNEFNIMVKDDDKIVVIDFPQ 248 (465)
T ss_pred CCCCCcccccceeeHHHhhcccceeeeeecCChHHHHHHHHHHHHHHHHcC---ceecccchheeEEecCCCEEEeechH
Confidence 1112222 124444555566788889 99999999999999999999999954
Q ss_pred c
Q 039228 182 A 182 (356)
Q Consensus 182 a 182 (356)
.
T Consensus 249 m 249 (465)
T KOG2268|consen 249 M 249 (465)
T ss_pred h
Confidence 4
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.74 E-value=0.081 Score=52.23 Aligned_cols=30 Identities=30% Similarity=0.440 Sum_probs=26.9
Q ss_pred EEecCCCCCCeEeC----CCCceEEccccccccc
Q 039228 156 ILHCDPKPSNVLLD----NDLFAHIGDFELARFR 185 (356)
Q Consensus 156 iiH~Dlkp~NIll~----~~~~~kl~Dfg~a~~~ 185 (356)
++|+|=.|.||++. .++.+.+.|||+...+
T Consensus 322 ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 322 FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred CccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 99999999999998 4778999999998754
No 469
>PLN02236 choline kinase
Probab=95.64 E-value=0.06 Score=50.62 Aligned_cols=29 Identities=28% Similarity=0.324 Sum_probs=25.4
Q ss_pred cEEecCCCCCCeEeCC-CCceEEccccccc
Q 039228 155 LILHCDPKPSNVLLDN-DLFAHIGDFELAR 183 (356)
Q Consensus 155 ~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 183 (356)
.++|+|+++.||++++ ++.+.|+||..+.
T Consensus 201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 3899999999999986 5789999999884
No 470
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=95.58 E-value=0.093 Score=50.17 Aligned_cols=50 Identities=20% Similarity=0.054 Sum_probs=35.5
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeecc-----C--ccchHHHHHHHHHHhhc
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ-----C--QGASKSFMAECKALKNI 126 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~--~~~~~~~~~E~~~l~~l 126 (356)
.+.||.|.++.||++....+++.|+||.-... . ....++...|...|..+
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l 87 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQ 87 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHH
Confidence 35789999999999998755468999984311 0 12345677788877765
No 471
>PRK05231 homoserine kinase; Provisional
Probab=95.54 E-value=0.063 Score=49.75 Aligned_cols=28 Identities=32% Similarity=0.469 Sum_probs=24.9
Q ss_pred EEecCCCCCCeEeCCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
+||+|+.|.||+++.+...-|+||+.+.
T Consensus 189 liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 189 VIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred cCCCCCCCCcEEEECCceEEEEeccccc
Confidence 9999999999999977666899999884
No 472
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=95.51 E-value=0.08 Score=48.85 Aligned_cols=29 Identities=38% Similarity=0.509 Sum_probs=26.0
Q ss_pred cEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 155 LILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 155 ~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
.++|+|+.+.||+++.++.+.|.||+.+.
T Consensus 188 ~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 188 GVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred ccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 39999999999999988877899999874
No 473
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=95.17 E-value=0.14 Score=44.14 Aligned_cols=96 Identities=23% Similarity=0.269 Sum_probs=61.1
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeeccC----------------ccchHHHHHHHHHHhhcC------CCChHHH
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQC----------------QGASKSFMAECKALKNIC------HRNLVRF 134 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~l 134 (356)
...||+|+.-.||.--.. ....||+..... ....++..+|+.....+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~HP~d---p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHPDD---PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECCCC---CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 457999999999975433 556789886543 223456677777666655 4455554
Q ss_pred HH----------------------------HH------HHHHHH----HHHHhhcCCCcEEecCCCCCCeEeCC--CC--
Q 039228 135 IS----------------------------IA------IDVASA----LDYLHHHCQELILHCDPKPSNVLLDN--DL-- 172 (356)
Q Consensus 135 ~~----------------------------i~------~~i~~a----L~~LH~~~~~~iiH~Dlkp~NIll~~--~~-- 172 (356)
++ ++ ..+..+ ..||-..+ |+.+|++|.||++.. ++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~~~~~~L~~f~~~l~~~~---Iv~~dl~~~NIv~~~~~~~~~ 159 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTEELRQALDEFKRYLLDHH---IVIRDLNPHNIVVQRRDSGEF 159 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccHHHHHHHHHHHHHHHHcC---CeecCCCcccEEEEecCCCce
Confidence 11 11 123333 35777777 999999999999963 22
Q ss_pred ceEEcc
Q 039228 173 FAHIGD 178 (356)
Q Consensus 173 ~~kl~D 178 (356)
.+.|+|
T Consensus 160 ~lvlID 165 (199)
T PF10707_consen 160 RLVLID 165 (199)
T ss_pred EEEEEe
Confidence 456665
No 474
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=95.17 E-value=0.006 Score=65.91 Aligned_cols=80 Identities=11% Similarity=-0.017 Sum_probs=68.5
Q ss_pred EEecCCCCCCeEeCCCCceEEcccccccccccCCCCCccCCCCccccccccchhhhcCCCCCCccchHhHHHHHHHHHcC
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELARFRQEVSNPTQSSSNGVRRTIGYTALDYDLGSEVSTNGDAYNYGILLLEMVTR 235 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG~~l~elltg 235 (356)
.+|+++|+-|.+|..+..++++++|+.++. ++.....+...+++.|+.++....-.++.++|+|+.|+.+|+.-.|
T Consensus 1361 ~v~~~Lkf~lpmIVtny~v~~gk~gLdKIk----np~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~ 1436 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTNYNVKLGKGGLDKIK----NPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDG 1436 (2724)
T ss_pred chhhhhhhhccceecCCccccccccccccc----CchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcc
Confidence 689999999999999999999999999833 2334455667778889999999888888889999999999999888
Q ss_pred CCCC
Q 039228 236 RKPI 239 (356)
Q Consensus 236 ~~Pf 239 (356)
..+|
T Consensus 1437 n~~f 1440 (2724)
T KOG1826|consen 1437 NAYF 1440 (2724)
T ss_pred cHHH
Confidence 8776
No 475
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.70 E-value=0.064 Score=46.70 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=33.3
Q ss_pred HHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccc
Q 039228 142 ASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELA 182 (356)
Q Consensus 142 ~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 182 (356)
+.+|.-.|+.. ...+|+|..|+||+-|..|.+||.|-+..
T Consensus 151 i~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 151 IKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred HHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhhh
Confidence 56788889542 34999999999999999999999997754
No 476
>PRK12396 5-methylribose kinase; Reviewed
Probab=94.50 E-value=0.24 Score=47.18 Aligned_cols=50 Identities=18% Similarity=0.192 Sum_probs=34.6
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEee----c--cCccchHHHHHHHHHHhhc
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLS----I--QCQGASKSFMAECKALKNI 126 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~----~--~~~~~~~~~~~E~~~l~~l 126 (356)
...||.|.-..||++.+..+++.|+||.-. . +..-..++..-|...|+.+
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~ 89 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLE 89 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHH
Confidence 467899999999999985445679999742 1 1123345666677777765
No 477
>PLN02876 acyl-CoA dehydrogenase
Probab=94.09 E-value=0.33 Score=51.23 Aligned_cols=55 Identities=9% Similarity=0.130 Sum_probs=37.3
Q ss_pred cccceecCceEEEEEEECCCC--eEEEEEEeeccCc-cchHHHHHHHHHHhhcC-CCCh
Q 039228 77 INLIGVGSFDAVYQGVFDLNR--AVVAIKVLSIQCQ-GASKSFMAECKALKNIC-HRNL 131 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~ni 131 (356)
...++.|.++.+|+.....++ ..+++|+...... .....+.+|+.+|+.+. |+++
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~v 101 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDV 101 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCC
Confidence 567899999999998775432 4677777643221 22346788999998885 5543
No 478
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=93.50 E-value=0.17 Score=43.25 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=45.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEccccccccc
Q 039228 130 NLVRFISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARFR 185 (356)
Q Consensus 130 niv~l~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 185 (356)
....-.+|+.+++..+.+|++.-...+.-.|++++|+-++++|.+|+.|...+...
T Consensus 57 ~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 57 PWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 33444678999999999999854444888999999999999999999999877543
No 479
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=93.44 E-value=0.27 Score=46.20 Aligned_cols=104 Identities=20% Similarity=0.250 Sum_probs=68.6
Q ss_pred ccccceecCceEEEEEEECCCCeEEEEEEeecc---------------------Cccc----h-HHHHHHHHHHhhcCCC
Q 039228 76 LINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQ---------------------CQGA----S-KSFMAECKALKNICHR 129 (356)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---------------------~~~~----~-~~~~~E~~~l~~l~h~ 129 (356)
+-..|..|.-+.||.|.... |..+|||+++.+ +... . -....|++-|.+|+..
T Consensus 148 inGCiSTGKEANVYHat~~d-G~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATEED-GSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeecCC-CceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 44567788889999998764 577999998532 0011 1 1234677778877533
Q ss_pred ChH-------H-------H---------------------HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCce
Q 039228 130 NLV-------R-------F---------------------ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFA 174 (356)
Q Consensus 130 niv-------~-------l---------------------~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 174 (356)
.|. + + ..+..+++.-+.-|-+.+ .+||.||.--|+|+. +|.+
T Consensus 227 GIP~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh-dG~l 303 (520)
T KOG2270|consen 227 GIPCPEPILLKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH-DGKL 303 (520)
T ss_pred CCCCCCceeeecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE-CCEE
Confidence 221 1 0 234455666666665544 399999999999987 5678
Q ss_pred EEccccccc
Q 039228 175 HIGDFELAR 183 (356)
Q Consensus 175 kl~Dfg~a~ 183 (356)
.|+|.+-+.
T Consensus 304 yiIDVSQSV 312 (520)
T KOG2270|consen 304 YIIDVSQSV 312 (520)
T ss_pred EEEEccccc
Confidence 899988764
No 480
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=93.41 E-value=0.45 Score=44.80 Aligned_cols=48 Identities=15% Similarity=0.086 Sum_probs=32.7
Q ss_pred cceecCceEEEEEEECCCCeEEEEEEee----c---cCccchHHHHHHHHHHhhc
Q 039228 79 LIGVGSFDAVYQGVFDLNRAVVAIKVLS----I---QCQGASKSFMAECKALKNI 126 (356)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~----~---~~~~~~~~~~~E~~~l~~l 126 (356)
.||.|....||++....+++.|+||.-. . ...-...+..-|...|+..
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~ 56 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQ 56 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHh
Confidence 5799999999999986544689999742 1 1123345556677777654
No 481
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=93.17 E-value=0.27 Score=46.02 Aligned_cols=47 Identities=28% Similarity=0.335 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEecCCCCCCeEeCCCCceEEcccccccc
Q 039228 135 ISIAIDVASALDYLHHHCQELILHCDPKPSNVLLDNDLFAHIGDFELARF 184 (356)
Q Consensus 135 ~~i~~~i~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 184 (356)
+.++.+.+.-++-+... .+.-|||+.-.||||+ +|++.|+||.+++.
T Consensus 324 lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 324 LSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred HHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEeeeeec
Confidence 55666666666655553 4588999999999999 99999999999983
No 482
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=92.99 E-value=0.55 Score=43.83 Aligned_cols=28 Identities=25% Similarity=0.291 Sum_probs=24.7
Q ss_pred EEecCCCCCCeEeCC-CCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDN-DLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 183 (356)
++|.|+.+.||++++ ++.++++||..|.
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 689999999999974 5789999999884
No 483
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=92.68 E-value=0.1 Score=46.15 Aligned_cols=29 Identities=24% Similarity=0.421 Sum_probs=25.3
Q ss_pred cEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 155 LILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 155 ~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
.++|+|+.+.||++++++..-|.||+.+.
T Consensus 165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 38999999999999977666799999875
No 484
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=92.53 E-value=0.24 Score=45.45 Aligned_cols=30 Identities=33% Similarity=0.319 Sum_probs=26.4
Q ss_pred CcEEecCCCCCCeEeCCC----CceEEccccccc
Q 039228 154 ELILHCDPKPSNVLLDND----LFAHIGDFELAR 183 (356)
Q Consensus 154 ~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~a~ 183 (356)
..++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 348999999999999974 889999999884
No 485
>PRK10271 thiK thiamine kinase; Provisional
Probab=92.22 E-value=0.11 Score=44.23 Aligned_cols=27 Identities=26% Similarity=0.292 Sum_probs=24.7
Q ss_pred EEecCCCCCCeEeCCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
.+|+|+.|.||++++++ ++|+||+.+.
T Consensus 79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~ 105 (188)
T PRK10271 79 PLHMDVHAGNLVHSASG-LRLIDWEYAG 105 (188)
T ss_pred eecCCCCCccEEEECCC-EEEEeCCccc
Confidence 68999999999998877 8899999885
No 486
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=91.98 E-value=0.13 Score=45.63 Aligned_cols=29 Identities=21% Similarity=0.299 Sum_probs=26.1
Q ss_pred cEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 155 LILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 155 ~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
.++|+|+.|.||++++++.+.|+||+.+.
T Consensus 164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 48999999999999998778899999874
No 487
>PHA03111 Ser/Thr kinase; Provisional
Probab=91.74 E-value=0.19 Score=46.39 Aligned_cols=49 Identities=27% Similarity=0.428 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHH-hhcCCCcEEecCCCCCCeEeCCCC------------------ceEEccccccccc
Q 039228 137 IAIDVASALDYL-HHHCQELILHCDPKPSNVLLDNDL------------------FAHIGDFELARFR 185 (356)
Q Consensus 137 i~~~i~~aL~~L-H~~~~~~iiH~Dlkp~NIll~~~~------------------~~kl~Dfg~a~~~ 185 (356)
++.||+.-.-.. ...+-...+|-||||+|||+-+.. .++|.||.+++..
T Consensus 284 ifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~ 351 (444)
T PHA03111 284 IFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVA 351 (444)
T ss_pred HHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHc
Confidence 555655433222 222223489999999999994332 3456777777643
No 488
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=91.49 E-value=0.092 Score=41.21 Aligned_cols=30 Identities=20% Similarity=0.107 Sum_probs=26.1
Q ss_pred cccceecCceEEEEEEECCCCeEEEEEEeec
Q 039228 77 INLIGVGSFDAVYQGVFDLNRAVVAIKVLSI 107 (356)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~ 107 (356)
...||.|+.|.||+|+... |+.||||+.+.
T Consensus 16 ~~PlasASiaQVh~a~l~~-g~~VaVKV~rP 45 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKD-GEEVAVKVQRP 45 (119)
T ss_pred cchhhheehhhheeeeecc-cchhhhhhcch
Confidence 3589999999999999876 69999999763
No 489
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=91.14 E-value=0.35 Score=44.44 Aligned_cols=28 Identities=25% Similarity=0.222 Sum_probs=24.5
Q ss_pred cEEecCCCCCCeEeCCCCceEEccccccc
Q 039228 155 LILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 155 ~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
.++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 188 ~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 188 GFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred ceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 3899999999999987 668899999764
No 490
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=90.65 E-value=0.17 Score=43.82 Aligned_cols=28 Identities=36% Similarity=0.521 Sum_probs=20.3
Q ss_pred EEecCCCCCCeEe-CCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLL-DNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll-~~~~~~kl~Dfg~a~ 183 (356)
++|.|+.|.||++ +.++.++|+||..|.
T Consensus 145 ~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 145 FCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred EeeccCccccEEeccCCCeEEEecHHHHh
Confidence 7899999999999 889999999999885
No 491
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=90.23 E-value=0.44 Score=43.15 Aligned_cols=28 Identities=32% Similarity=0.338 Sum_probs=26.4
Q ss_pred EEecCCCCCCeEeCCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
++|+|+.|.|++.++.+.++|+||..|.
T Consensus 155 ~cH~Dl~~~N~l~t~~~~l~LIDWEyAg 182 (269)
T COG0510 155 PCHNDLNPGNLLLTDKGGLFLIDWEYAG 182 (269)
T ss_pred eecCCCCccceEEcCCCcEEEEecccCC
Confidence 8999999999999999999999998875
No 492
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=89.84 E-value=0.83 Score=41.78 Aligned_cols=48 Identities=21% Similarity=0.287 Sum_probs=32.0
Q ss_pred CccccceecCceEEEEEEECCCCeEEEEEEeeccCccchHHHHHHHHHHhhcC
Q 039228 75 PLINLIGVGSFDAVYQGVFDLNRAVVAIKVLSIQCQGASKSFMAECKALKNIC 127 (356)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 127 (356)
+-.+.++-|....+|+.. .+++.+.||+-. ......|..|..-|+.|.
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~ 67 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS---ESGRDMFEGEAEGLKALA 67 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHC
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecC---hhhHHHHHHHHHHHHHHH
Confidence 345578889999999877 556889999865 233456777888777773
No 493
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=89.24 E-value=0.32 Score=44.20 Aligned_cols=30 Identities=27% Similarity=0.517 Sum_probs=25.0
Q ss_pred cEEecCCCCCCeEeCCCCc-eEEcccccccc
Q 039228 155 LILHCDPKPSNVLLDNDLF-AHIGDFELARF 184 (356)
Q Consensus 155 ~iiH~Dlkp~NIll~~~~~-~kl~Dfg~a~~ 184 (356)
.++|+|+.|.||++++++. .-|.||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 3899999999999997554 46999998853
No 494
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=89.19 E-value=0.27 Score=45.68 Aligned_cols=32 Identities=28% Similarity=0.571 Sum_probs=24.2
Q ss_pred cEEecCCCCCCeEeCCC------------------CceEEcccccccccc
Q 039228 155 LILHCDPKPSNVLLDND------------------LFAHIGDFELARFRQ 186 (356)
Q Consensus 155 ~iiH~Dlkp~NIll~~~------------------~~~kl~Dfg~a~~~~ 186 (356)
..+|-||||+|||+-+. -.++|.||.+++..+
T Consensus 299 nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~ 348 (434)
T PF05445_consen 299 NFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVAN 348 (434)
T ss_pred eeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhcc
Confidence 48999999999999432 245788888887543
No 495
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=88.89 E-value=0.37 Score=41.35 Aligned_cols=28 Identities=25% Similarity=0.330 Sum_probs=24.1
Q ss_pred EEecCCCCCCeEeCCCC-----ceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDL-----FAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~-----~~kl~Dfg~a~ 183 (356)
++|||+.+.||++..++ .+.|.||..+.
T Consensus 122 l~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~ 154 (196)
T smart00587 122 LNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH 154 (196)
T ss_pred EeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence 89999999999997543 58899999885
No 496
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=88.77 E-value=0.31 Score=47.62 Aligned_cols=78 Identities=10% Similarity=0.007 Sum_probs=44.7
Q ss_pred CccchHhHHHHHHHHHcCCCCCCccccCCccHHHHHHHhCCC--chHHHhhhhhccccccccccccchhhhhchhhHHHH
Q 039228 218 TNGDAYNYGILLLEMVTRRKPIDFMFEGDLNLHNFARMAFPN--RVMDIVNLVLLNDNKVLAGTNSNMLRKTKMNSRLEC 295 (356)
Q Consensus 218 ~~sDiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (356)
+++||||+|.++.++.-|..-+..... .+........+.. ....+.-.. ...-++
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~--s~~l~~i~k~~~~d~~~~~~a~e~---------------------~~~~~~ 166 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTE--SEYLEILLKYYTDDQELLSTAMEH---------------------LIQLLA 166 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHH--HHHHHHHHHhccCchhHHHHHHHH---------------------HHHHhh
Confidence 599999999999999998776543211 1111111121211 111111100 112256
Q ss_pred HHHHHHHHHhhcCCCcCCCCChH
Q 039228 296 LIFMVRIGAACSMGSSQDRMNVP 318 (356)
Q Consensus 296 ~~~l~~l~~~Cl~~dP~~RPs~~ 318 (356)
...+..+...|+-..|..||...
T Consensus 167 d~~~~~~~~~c~~~~~~ir~l~~ 189 (725)
T KOG1093|consen 167 DKKRLPLLKKCLWLEPIIRPLPM 189 (725)
T ss_pred hHhHHHHhccCCccccccccchh
Confidence 66778899999999998877543
No 497
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=88.71 E-value=0.34 Score=45.15 Aligned_cols=28 Identities=43% Similarity=0.583 Sum_probs=25.3
Q ss_pred EEecCCCCCCeEeCCCCc-eEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLF-AHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~-~kl~Dfg~a~ 183 (356)
+||+|+.|.||+++.+.. +.+.||+-+.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEccccc
Confidence 899999999999998874 8899999875
No 498
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=86.70 E-value=0.39 Score=44.36 Aligned_cols=28 Identities=25% Similarity=0.216 Sum_probs=26.3
Q ss_pred EEecCCCCCCeEeCCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
++|+|+.+.|++++.++.+.++||..+.
T Consensus 198 lcHgD~~~~Nvl~~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 198 LVHGKLSLSHFLYDETRGGYFINFEKAS 225 (309)
T ss_pred eeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence 9999999999999999899999999885
No 499
>PTZ00296 choline kinase; Provisional
Probab=86.40 E-value=3.5 Score=40.15 Aligned_cols=27 Identities=26% Similarity=0.379 Sum_probs=23.2
Q ss_pred EEecCCCCCCeEeCCCCceEEccccccc
Q 039228 156 ILHCDPKPSNVLLDNDLFAHIGDFELAR 183 (356)
Q Consensus 156 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 183 (356)
++|.|+-+.|||.+.++ ++|+||..|.
T Consensus 286 fCHNDl~~~NiL~~~~~-l~LIDfEYAg 312 (442)
T PTZ00296 286 FCHNDLQENNIINTNKC-LRLIDFEYSG 312 (442)
T ss_pred EEeCCCCccceeecCCC-EEEEeecccc
Confidence 78999999999887554 9999998774
No 500
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=86.13 E-value=1.1 Score=42.69 Aligned_cols=31 Identities=35% Similarity=0.528 Sum_probs=23.9
Q ss_pred ccceecCceEEEEEEEC---------------CCCeEEEEEEeecc
Q 039228 78 NLIGVGSFDAVYQGVFD---------------LNRAVVAIKVLSIQ 108 (356)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~---------------~~~~~vavK~~~~~ 108 (356)
..||.|.-..||+|..+ .+.+.+|+|+.+..
T Consensus 195 ~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~ 240 (565)
T KOG1236|consen 195 EPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPN 240 (565)
T ss_pred cccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCcc
Confidence 36899999999998742 23578999998743
Done!