BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039231
(506 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 120/224 (53%), Gaps = 38/224 (16%)
Query: 303 KRYGYADIKKMTNSFKYK--LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE--FINE 358
KR+ +++ +++F K LG+GG+G VYKG+L DG+ VAVK L + + G E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 359 VASISRTSHVNVVALLGFCLRVAEEL-------------------------------SST 387
V IS H N++ L GFC+ E L
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+G ARGL YLH C +I+H D+K NILLDE+F + DFGLAK+ + K+ + R
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAVR 204
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVV 491
GT+G+IAPE + G+ S K+DV+ YG+M+ E+ G++ D+
Sbjct: 205 GTIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQRAFDLA 246
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 38/223 (17%)
Query: 303 KRYGYADIKKMTNSFKYK--LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE--FINE 358
KR+ +++ +++F K LG+GG+G VYKG+L DG VAVK L + + G E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 359 VASISRTSHVNVVALLGFCLRVAEEL-------------------------------SST 387
V IS H N++ L GFC+ E L
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+G ARGL YLH C +I+H D+K NILLDE+F + DFGLAK+ + K+ + R
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAVR 196
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDV 490
G +G+IAPE + G+ S K+DV+ YG+M+ E+ G++ D+
Sbjct: 197 GXIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQRAFDL 237
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 39/219 (17%)
Query: 304 RYGYADIKKMTNSFKYK--LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVAS 361
R D+++ TN+F +K +G G +G VYKG L DG+ VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 362 -ISRTSHVNVVALLGFC-------------------------------LRVAEELSSTIG 389
+S H ++V+L+GFC + + L IG
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
ARGL YLH + I+H D+K NILLDE+F PKI+DFG++K + +GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNV 488
+GYI PE F + G ++ KSDVY++G+++FE+ R +
Sbjct: 205 LGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 39/219 (17%)
Query: 304 RYGYADIKKMTNSFKYK--LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVAS 361
R D+++ TN+F +K +G G +G VYKG L DG+ VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 362 -ISRTSHVNVVALLGFC-------------------------------LRVAEELSSTIG 389
+S H ++V+L+GFC + + L IG
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
ARGL YLH + I+H D+K NILLDE+F PKI+DFG++K +GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNV 488
+GYI PE F + G ++ KSDVY++G+++FE+ R +
Sbjct: 205 LGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 50/228 (21%)
Query: 305 YGYADIKKMTNSFKY--------KLGQGGYGSVYKGKLLDGSNVAVKVLN-----DSKGN 351
+ + ++K +TN+F K+G+GG+G VYKG ++ + VAVK L ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 352 GKEFINEVASISRTSHVNVVALLGF------------------------CLRVAEELSST 387
++F E+ +++ H N+V LLGF CL LS
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 388 I------GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
+ G A G+ +LH +H DIK NILLDE F KISDFGLA+ + +
Sbjct: 134 MRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
+ GT Y+APE GE++ KSD+Y++G+++ E+ G VD
Sbjct: 191 MXSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 50/228 (21%)
Query: 305 YGYADIKKMTNSFKY--------KLGQGGYGSVYKGKLLDGSNVAVKVLN-----DSKGN 351
+ + ++K +TN+F K+G+GG+G VYKG ++ + VAVK L ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 352 GKEFINEVASISRTSHVNVVALLGF------------------------CLRVAEELSST 387
++F E+ +++ H N+V LLGF CL LS
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 388 I------GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
+ G A G+ +LH +H DIK NILLDE F KISDFGLA+ + +
Sbjct: 134 MRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
GT Y+APE GE++ KSD+Y++G+++ E+ G VD
Sbjct: 191 MXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 46/226 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 19 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L +E E+ I IAR G++YLH + I+H D
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA + +R G++ ++APEV ++ S++
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 469 SDVYNYGMMIFEMTGGR----------KNVDVVDNGSTALDLQASR 504
SDVY +G++++E+ G+ + +++V GS + DL R
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVR 239
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 50/228 (21%)
Query: 305 YGYADIKKMTNSFKY--------KLGQGGYGSVYKGKLLDGSNVAVKVLN-----DSKGN 351
+ + ++K +TN+F K+G+GG+G VYKG ++ + VAVK L ++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 352 GKEFINEVASISRTSHVNVVALLGF------------------------CLRVAEELSST 387
++F E+ +++ H N+V LLGF CL LS
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 388 I------GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
+ G A G+ +LH +H DIK NILLDE F KISDFGLA+ + +
Sbjct: 128 MRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
GT Y+APE GE++ KSD+Y++G+++ E+ G VD
Sbjct: 185 MXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 17 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA + +R G++ ++APEV ++ S++
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 192 SDVYAFGIVLYELMTGQ 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 15 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA + +R G++ ++APEV ++ S++
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 190 SDVYAFGIVLYELMTGQ 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 20 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA + +R G++ ++APEV ++ S++
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 195 SDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 15 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA + +R G++ ++APEV ++ S++
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 190 SDVYAFGIVLYELMTGQ 206
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 36/209 (17%)
Query: 307 YADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVL---NDSKGNGKEFINEVASIS 363
Y +I+ ++G G +G+VYKGK +VAVK+L + + + F NEVA +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 364 RTSHVNVVALLGFC--------------------LRVAE---ELSSTIGIAR----GLEY 396
+T HVN++ +G+ L V E ++ I IAR G++Y
Sbjct: 88 KTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDY 147
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
LH + I+H D+K +NI L E KI DFGLA + +R + G+V ++APE
Sbjct: 148 LH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
Query: 457 VF-CRNIGEVSYKSDVYNYGMMIFEMTGG 484
V ++ S++SDVY+YG++++E+ G
Sbjct: 205 VIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 42 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 156
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA + +R G++ ++APEV ++ S++
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 217 SDVYAFGIVLYELMTGQ 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 20 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA + +R G++ ++APEV ++ S++
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 195 SDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 43 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA + +R G++ ++APEV ++ S++
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 218 SDVYAFGIVLYELMTGQ 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 46/226 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 31 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L +E E+ I IAR G++YLH + I+H D
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA +R G++ ++APEV ++ S++
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 469 SDVYNYGMMIFEMTGGR----------KNVDVVDNGSTALDLQASR 504
SDVY +G++++E+ G+ + +++V GS + DL R
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVR 251
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 46/226 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 31 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L +E E+ I IAR G++YLH + I+H D
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA +R G++ ++APEV ++ S++
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 469 SDVYNYGMMIFEMTGGR----------KNVDVVDNGSTALDLQASR 504
SDVY +G++++E+ G+ + +++V GS + DL R
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVR 251
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 15 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA +R G++ ++APEV ++ S++
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 190 SDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 35 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 149
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA +R G++ ++APEV ++ S++
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 210 SDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 36/197 (18%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 43 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 377 C--------------------LRVAE---ELSSTIGIAR----GLEYLHLGCSTRILHFD 409
L + E E+ I IAR G++YLH + I+H D
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNIGEVSYK 468
+K +NI L ED KI DFGLA +R G++ ++APEV ++ S++
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 469 SDVYNYGMMIFEMTGGR 485
SDVY +G++++E+ G+
Sbjct: 218 SDVYAFGIVLYELMTGQ 234
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 50/228 (21%)
Query: 305 YGYADIKKMTNSFKY--------KLGQGGYGSVYKGKLLDGSNVAVKVLN-----DSKGN 351
+ + ++K +TN+F K G+GG+G VYKG ++ + VAVK L ++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 352 GKEFINEVASISRTSHVNVVALLGF------------------------CLRVAEELSS- 386
++F E+ ++ H N+V LLGF CL LS
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 387 -----TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
G A G+ +LH +H DIK NILLDE F KISDFGLA+ + +
Sbjct: 125 XRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
+ GT Y APE GE++ KSD+Y++G+++ E+ G VD
Sbjct: 182 XXSRIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 39/207 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGK---EFINEVASISRT 365
DI + K K+G G +G+V++ + GS+VAVK+L + + + EF+ EVA + R
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 366 SHVNVVALLGFC-----LRVAEE-------------------------LSSTIGIARGLE 395
H N+V +G L + E LS +A+G+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 396 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 455
YLH + I+H ++K N+L+D+ + K+ DFGL+++ + + +S A GT ++AP
Sbjct: 152 YLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAP 208
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEMT 482
EV + KSDVY++G++++E+
Sbjct: 209 EVLRDEPS--NEKSDVYSFGVILWELA 233
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 39/207 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGK---EFINEVASISRT 365
DI + K K+G G +G+V++ + GS+VAVK+L + + + EF+ EVA + R
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 366 SHVNVVALLGFC-----LRVAEE-------------------------LSSTIGIARGLE 395
H N+V +G L + E LS +A+G+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 396 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 455
YLH + I+H D+K N+L+D+ + K+ DFGL+++ + + A GT ++AP
Sbjct: 152 YLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAP 208
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEMT 482
EV + KSDVY++G++++E+
Sbjct: 209 EVLRDEPS--NEKSDVYSFGVILWELA 233
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 301 SPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEV 359
S Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 360 ASISRTSHVNVVALLGFCLRVA-----------------------EELSSTI------GI 390
A + H N+V LLG C R +E+S+ + I
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 125
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 181
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ APE N + S KSDV+ +G++++E+
Sbjct: 182 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+S+ + I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 180
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 181 PESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+S+ + I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 180
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 181 PESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+S+ + I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 180
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 181 PESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 36/204 (17%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASISRTSH 367
++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 368 VNVVALLGFCLRVA-----------------------EELSSTI------GIARGLEYLH 398
N+V LLG C R +E+S+ + I+ +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
+H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESL 182
Query: 459 CRNIGEVSYKSDVYNYGMMIFEMT 482
N + S KSDV+ +G++++E+
Sbjct: 183 AYN--KFSIKSDVWAFGVLLWEIA 204
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+S+ + I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 180
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 181 PESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 169
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 228
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 229 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 274
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 209
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 255
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 36/204 (17%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASISRTSH 367
++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 368 VNVVALLGFCLRVA-----------------------EELSSTI------GIARGLEYLH 398
N+V LLG C R +E+S+ + I+ +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
+H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESL 182
Query: 459 CRNIGEVSYKSDVYNYGMMIFEMT 482
N + S KSDV+ +G++++E+
Sbjct: 183 AYN--KFSIKSDVWAFGVLLWEIA 204
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL- 208
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 209 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 254
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 208
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 209 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 254
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 142
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 201
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 202 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 247
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 145
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 204
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 205 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 209
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 168
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 227
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 228 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 273
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 147
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 206
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 207 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 252
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G++YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 148
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 207
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 208 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 253
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 301 SPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEV 359
S Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 360 ASISRTSHVNVVALLGFCLRVA-----------------------EELSSTI------GI 390
A + H N+V LLG C R +E+++ + I
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPI 181
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ APE N + S KSDV+ +G++++E+
Sbjct: 182 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 301 SPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEV 359
S Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 360 ASISRTSHVNVVALLGFCLRVA-----------------------EELSSTI------GI 390
A + H N+V LLG C R +E+++ + I
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 181
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ APE N + S KSDV+ +G++++E+
Sbjct: 182 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 300 LSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINE 358
+SP Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E
Sbjct: 3 MSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 61
Query: 359 VASISRTSHVNVVALLGFCLRVA-----------------------EELSSTI------G 389
A + H N+V LLG C R +E+++ +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+
Sbjct: 122 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFP 177
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ + APE N + S KSDV+ +G++++E+
Sbjct: 178 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 301 SPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEV 359
S Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 360 ASISRTSHVNVVALLGFCLRVA-----------------------EELSSTI------GI 390
A + H N+V LLG C R +E+++ + I
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 181
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ APE N + S KSDV+ +G++++E+
Sbjct: 182 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+++ + I+ +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 126 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTA 181
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 182 PESLAYN--KFSIKSDVWAFGVLLWEIA 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 68
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+++ + I+ +
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 128
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 129 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 184
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 185 PESLAYN--KFSIKSDVWAFGVLLWEIA 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 300 LSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINE 358
+SP Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E
Sbjct: 2 MSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 359 VASISRTSHVNVVALLGFCLRVA-----------------------EELSSTI------G 389
A + H N+V LLG C R +E+++ +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+
Sbjct: 121 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFP 176
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ + APE N + S KSDV+ +G++++E+
Sbjct: 177 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 301 SPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEV 359
S Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 65
Query: 360 ASISRTSHVNVVALLGFCLRVA-----------------------EELSSTI------GI 390
A + H N+V LLG C R +E+++ + I
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 181
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ APE N + S KSDV+ +G++++E+
Sbjct: 182 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+++ + I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 180
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 181 PESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 300 LSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINE 358
+SP Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E
Sbjct: 3 MSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 61
Query: 359 VASISRTSHVNVVALLGFCLRVA-----------------------EELSSTI------G 389
A + H N+V LLG C R +E+++ +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+
Sbjct: 122 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFP 177
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ + APE N + S KSDV+ +G++++E+
Sbjct: 178 IKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+++ + I+ +
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 137
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 138 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 193
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 194 PESLAYN--KFSIKSDVWAFGVLLWEIA 219
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+++ + I+ +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 127 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 182
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 183 PESLAYN--KFSIKSDVWAFGVLLWEIA 208
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+++ + I+ +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 180
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 181 PESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 271
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+S+ + I+ +
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 331
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H ++ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 332 EYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 387
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 388 PESLAYN--KFSIKSDVWAFGVLLWEIA 413
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLNDSKGNGK--EFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K+LN++ G EF++E ++ H ++V L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 83 LGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLV 139
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLA++ E + G + + ++A E C + + +
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CIHYRKFT 197
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ I+E MT G K D
Sbjct: 198 HQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 36/204 (17%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASISRTSH 367
++++ + K+KLG G +G VY+G S VAVK L + +EF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 368 VNVVALLGFCLRVA-----------------------EELSSTI------GIARGLEYLH 398
N+V LLG C R +E+S+ + I+ +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
+H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESL 182
Query: 459 CRNIGEVSYKSDVYNYGMMIFEMT 482
N + S KSDV+ +G++++E+
Sbjct: 183 AYN--KFSIKSDVWAFGVLLWEIA 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 41/224 (18%)
Query: 316 SFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
+F ++G G +G V+ G L+ VA+K + + + ++FI E + + SH +V L G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 376 FCLRVA----------------------------EELSSTIGIARGLEYLHLGCSTRILH 407
CL A L + + G+ YL C ++H
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF + S
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SFSRYSS 181
Query: 468 KSDVYNYGMMIFEMTG-------GRKNVDVVDNGSTALDLQASR 504
KSDV+++G++++E+ R N +VV++ ST L R
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 225
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 41/224 (18%)
Query: 316 SFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
+F ++G G +G V+ G L+ VA+K + + + ++FI E + + SH +V L G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 376 FCLR---------------------------VAEELSST-IGIARGLEYLHLGCSTRILH 407
CL AE L + + G+ YL C ++H
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF + S
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SFSRYSS 184
Query: 468 KSDVYNYGMMIFEMTG-------GRKNVDVVDNGSTALDLQASR 504
KSDV+++G++++E+ R N +VV++ ST L R
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 228
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G+++L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 148
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 207
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 208 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 253
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 41/224 (18%)
Query: 316 SFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
+F ++G G +G V+ G L+ VA+K + + + ++FI E + + SH +V L G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 376 FCLR---------------------------VAEELSST-IGIARGLEYLHLGCSTRILH 407
CL AE L + + G+ YL C ++H
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF + S
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SFSRYSS 186
Query: 468 KSDVYNYGMMIFEMTG-------GRKNVDVVDNGSTALDLQASR 504
KSDV+++G++++E+ R N +VV++ ST L R
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 230
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 41/224 (18%)
Query: 316 SFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
+F ++G G +G V+ G L+ VA+K + + + ++FI E + + SH +V L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 376 FCLRVA----------------------------EELSSTIGIARGLEYLHLGCSTRILH 407
CL A L + + G+ YL C ++H
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF + S
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SFSRYSS 183
Query: 468 KSDVYNYGMMIFEMTG-------GRKNVDVVDNGSTALDLQASR 504
KSDV+++G++++E+ R N +VV++ ST L R
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G+++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 209
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 255
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G+++L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 155
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 214
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 215 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 260
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G+++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 210
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 211 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 256
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G+++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 209
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 255
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLNDSKGNGK--EFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K+LN++ G EF++E ++ H ++V L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 106 LGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLV 162
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLA++ E + G + + ++A E C + + +
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CIHYRKFT 220
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ I+E MT G K D
Sbjct: 221 HQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 306 GYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRT 365
G+ ++K+ + +LG G +G V GK +VAVK++ + + EF E ++ +
Sbjct: 1 GHMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL 60
Query: 366 SHVNVVALLGFC----------------------------LRVAEELSSTIGIARGLEYL 397
SH +V G C L ++ L + G+ +L
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 398 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 457
S + +H D+ N L+D D C K+SDFG+ + + +S G + V + APEV
Sbjct: 121 E---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEV 176
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEM-TGGRKNVDVVDNGSTALDLQASRK 505
F + + S KSDV+ +G++++E+ + G+ D+ N L + +
Sbjct: 177 F--HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR 223
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G+++L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 209
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 268
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 269 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 314
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 317 FKYKLGQGGYGSVYKGKLLD--GSNV--AVKVLN--DSKGNGKEFINEVASISRTSHVNV 370
F +G+G +G VY G LLD G + AVK LN G +F+ E + SH NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 371 VALLGFCLR-----------------------------VAEELSSTIGIARGLEYLHLGC 401
++LLG CLR V + + + +A+G+++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPEVFC 459
S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A E
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL- 210
Query: 460 RNIGEVSYKSDVYNYGMMIFEMT--GGRKNVDVVDNGSTALDLQASR 504
+ + KSDV+++G++++E+ G DV T LQ R
Sbjct: 211 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 41/240 (17%)
Query: 300 LSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEV 359
L P+ + I +F ++G G +G V+ G L+ VA+K + + + +FI E
Sbjct: 14 LVPRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEA 73
Query: 360 ASISRTSHVNVVALLGFCLRVA----------------------------EELSSTIGIA 391
+ + SH +V L G CL A L + +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 133
Query: 392 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 451
G+ YL C ++H D+ N L+ E+ K+SDFG+ + + S TG + V
Sbjct: 134 EGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVK 189
Query: 452 YIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDNGSTALDLQASR 504
+ +PEVF + S KSDV+++G++++E+ R N +VV++ ST L R
Sbjct: 190 WASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 247
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 310
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+++ + I+ +
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 370
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H ++ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 371 EYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 426
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 427 PESLAYN--KFSIKSDVWAFGVLLWEIA 452
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASIS 363
Y ++++ + K+KLG G YG VY+G S VAVK L + +EF+ E A +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 268
Query: 364 RTSHVNVVALLGFCLRVA-----------------------EELSSTI------GIARGL 394
H N+V LLG C R +E+++ + I+ +
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 328
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL +H ++ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 329 EYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 384
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
PE N + S KSDV+ +G++++E+
Sbjct: 385 PESLAYN--KFSIKSDVWAFGVLLWEIA 410
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 36/204 (17%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINEVASISRTSH 367
++++ + K+KLG G YG VY G S VAVK L + +EF+ E A + H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 368 VNVVALLGFC---------------------LRV--AEELSSTI------GIARGLEYLH 398
N+V LLG C LR EE+++ + I+ +EYL
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
+H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + APE
Sbjct: 148 ---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 203
Query: 459 CRNIGEVSYKSDVYNYGMMIFEMT 482
N S KSDV+ +G++++E+
Sbjct: 204 AYNT--FSIKSDVWAFGVLLWEIA 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 41/216 (18%)
Query: 310 IKKMTNSFKYK-LGQGGYGSVYKGKLL-DGSNV----AVKVL--NDSKGNGKEFINEVAS 361
I K T K K LG G +G+VYKG + DG NV A+KVL N S KE ++E
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYV 72
Query: 362 ISRTSHVNVVALLGFCLRVAEELSSTI---------------------------GIARGL 394
++ V LLG CL +L + + IA+G+
Sbjct: 73 MAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGM 132
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
YL R++H D+ N+L+ KI+DFGLA++ + E+ G + + ++A
Sbjct: 133 SYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFE-MTGGRKNVD 489
E R +++SDV++YG+ ++E MT G K D
Sbjct: 190 LESILRR--RFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 316 SFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
+F ++G G +G V+ G L+ VA+K + + + ++FI E + + SH +V L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 376 FCLRVAEE-----------LSSTIGIARGL---EYLHLGC-----------STRILHFDI 410
CL A LS + RGL E L C ++H D+
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDL 129
Query: 411 KPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 470
N L+ E+ K+SDFG+ + + S TG + V + +PEVF + S KSD
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SFSRYSSKSD 186
Query: 471 VYNYGMMIFEMTG-------GRKNVDVVDNGSTALDLQASR 504
V+++G++++E+ R N +VV++ ST L R
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 46/214 (21%)
Query: 316 SFKYKLGQGGYGSVYKGKLL-DGSNVAVK--VLNDSKGNG------KEFINEVASISRTS 366
++ ++G+GG+G V+KG+L+ D S VA+K +L DS+G +EF EV +S +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 367 HVNVVALLGFC--------------------------LRVAEELSSTIGIARGLEYLHLG 400
H N+V L G ++ + +L + IA G+EY+
Sbjct: 82 HPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-N 140
Query: 401 CSTRILHFDIKPHNILL---DED--FCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+ I+H D++ NI L DE+ C K++DFGL++ +S+ S++G G ++AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
E + K+D Y++ M+++ + G D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 38/200 (19%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR- 379
+G+G +G V K K +VA+K + +S+ K FI E+ +SR +H N+V L G CL
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 380 ---------------------------VAEELSSTIGIARGLEYLHLGCSTRILHFDIKP 412
A +S + ++G+ YLH ++H D+KP
Sbjct: 74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 413 HNILLDE-DFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDV 471
N+LL KI DFG A C+ + MT +G+ ++APEVF S K DV
Sbjct: 134 PNLLLVAGGTVLKICDFGTA--CDIQ---THMTNNKGSAAWMAPEVF--EGSNYSEKCDV 186
Query: 472 YNYGMMIFEMTGGRKNVDVV 491
+++G++++E+ RK D +
Sbjct: 187 FSWGIILWEVITRRKPFDEI 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 38/200 (19%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR- 379
+G+G +G V K K +VA+K + +S+ K FI E+ +SR +H N+V L G CL
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGACLNP 74
Query: 380 ---------------------------VAEELSSTIGIARGLEYLHLGCSTRILHFDIKP 412
A +S + ++G+ YLH ++H D+KP
Sbjct: 75 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 134
Query: 413 HNILLDE-DFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDV 471
N+LL KI DFG A C+ + MT +G+ ++APEVF S K DV
Sbjct: 135 PNLLLVAGGTVLKICDFGTA--CDIQ---THMTNNKGSAAWMAPEVF--EGSNYSEKCDV 187
Query: 472 YNYGMMIFEMTGGRKNVDVV 491
+++G++++E+ RK D +
Sbjct: 188 FSWGIILWEVITRRKPFDEI 207
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL- 188
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 63 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 120
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 121 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 177
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 178 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 188
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 188
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 188
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 188
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 65 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 122
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 123 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 179
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 180 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 218
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 188
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 46/214 (21%)
Query: 316 SFKYKLGQGGYGSVYKGKLL-DGSNVAVK--VLNDSKGNG------KEFINEVASISRTS 366
++ ++G+GG+G V+KG+L+ D S VA+K +L DS+G +EF EV +S +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 367 HVNVVALLGFC--------------------------LRVAEELSSTIGIARGLEYLHLG 400
H N+V L G ++ + +L + IA G+EY+
Sbjct: 82 HPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-N 140
Query: 401 CSTRILHFDIKPHNILL---DED--FCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+ I+H D++ NI L DE+ C K++DFG ++ +S+ S++G G ++AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
E + K+D Y++ M+++ + G D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 132 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 188
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 46/214 (21%)
Query: 316 SFKYKLGQGGYGSVYKGKLL-DGSNVAVK--VLNDSKGNG------KEFINEVASISRTS 366
++ ++G+GG+G V+KG+L+ D S VA+K +L DS+G +EF EV +S +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 367 HVNVVALLGFC--------------------------LRVAEELSSTIGIARGLEYLHLG 400
H N+V L G ++ + +L + IA G+EY+
Sbjct: 82 HPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-N 140
Query: 401 CSTRILHFDIKPHNILL---DED--FCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+ I+H D++ NI L DE+ C K++DF L++ +S+ S++G G ++AP
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAP 195
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
E + K+D Y++ M+++ + G D
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G LR+ + + + IA G+ Y+
Sbjct: 71 KLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE-- 128
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 129 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWTAPEAAL- 185
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 186 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 224
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G LR+ + + IA G+ Y+
Sbjct: 64 KLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 121
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 122 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL- 178
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 179 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 217
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G LR+ + + + IA G+ Y+
Sbjct: 71 KLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE-- 128
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 129 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 185
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 186 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 224
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G LR+ + + IA G+ Y+
Sbjct: 240 KLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 297
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 298 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 354
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 355 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G LR+ + + IA G+ Y+
Sbjct: 240 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 297
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 298 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 354
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 355 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G LR+ + + IA G+ Y+
Sbjct: 240 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 297
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 298 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 354
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 355 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D+ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 132 -RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 188
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 189 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 227
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G LR+ + + IA G+ Y+
Sbjct: 67 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 124
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 125 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 181
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 182 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 220
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G LR+ + + IA G+ Y+
Sbjct: 323 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 380
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGLA++ E + GA+ + + APE
Sbjct: 381 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL- 437
Query: 461 NIGEVSYKSDVYNYGMMIFEMT 482
G + KSDV+++G+++ E+T
Sbjct: 438 -YGRFTIKSDVWSFGILLTELT 458
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLGQG +G V+ G + VA+K L + + F+ E + + H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 369 NVVAL----------------------------LGFCLRVAEELSSTIGIARGLEYLHLG 400
+V L +G LR+ + + IA G+ Y+
Sbjct: 241 KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 298
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ E+ K++DFGL ++ E + GA+ + + APE
Sbjct: 299 -RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPEAAL- 355
Query: 461 NIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVDN 493
G + KSDV+++G+++ E+T G N +V+D
Sbjct: 356 -YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 394
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 93 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 149
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 150 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 207
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 208 HQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 89 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 145
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 146 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 203
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 204 HQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 83 LGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 139
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 197
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 77 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 133
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 134 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 191
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 192 HQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 139
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 197
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 142
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 200
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 108 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 164
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 165 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 222
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 223 HQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 85 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 141
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 199
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 142
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 200
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 142
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 200
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 146
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 204
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 139
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 197
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNVAVKVL------NDSKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V + V S KE ++E ++ + +V L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 117 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 173
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 174 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 231
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 232 HQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 84 LGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 140
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 198
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 199 HQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 84 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 140
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 198
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 199 HQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 87 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 143
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 201
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 202 HQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 83 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 139
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 197
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 141
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 199
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 86 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 142
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 200
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA G+ YL R++
Sbjct: 80 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLV 136
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 137 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 194
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 195 HQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 46/216 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVL-----NDSKGNGKEFINEVASISRTSHVNVVALLG 375
+G GG+G VY+ + G VAVK D + E + H N++AL G
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 376 FCL------------------------RVAEEL--SSTIGIARGLEYLHLGCSTRILHFD 409
CL R+ ++ + + IARG+ YLH I+H D
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRD 133
Query: 410 IKPHNILLDEDF--------CPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 461
+K NIL+ + KI+DFGLA+ +R + A G ++APEV +
Sbjct: 134 LKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMAPEVIRAS 189
Query: 462 IGEVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTA 497
+ S SDV++YG++++E+ G +D + A
Sbjct: 190 M--FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
L G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 139
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 197
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 42/208 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
+LG G +G V+ G + + VAVK L + + F+ E + H +V L R
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 380 ------VAEELSS-----------------------TIGIARGLEYLHLGCSTRILHFDI 410
+ E ++ + IA G+ Y+ +H D+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 136
Query: 411 KPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 470
+ N+L+ E KI+DFGLA++ E + GA+ + + APE N G + KSD
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGCFTIKSD 193
Query: 471 VYNYGMMIFEMTG-------GRKNVDVV 491
V+++G++++E+ GR N DV+
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
L G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 146
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 204
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 85 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 141
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFG AK+ +E G + + ++A E I +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 199
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 139
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFG AK+ +E G + + ++A E I +
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 197
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 374 LGFCLRVAEELSST---------------------------IGIARGLEYLHLGCSTRIL 406
LG CL +L + + IA+G+ YL R++
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 146
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFG AK+ +E G + + ++A E I +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 204
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 35/222 (15%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISR 364
YG +I +F +LG G +G V GK +VA+K++ + + EFI E +
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 75
Query: 365 TSHVNVVALLGFC----------------------------LRVAEELSSTIGIARGLEY 396
SH +V L G C + + L + +EY
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
L S + LH D+ N L+++ K+SDFGL++ E S G++ V + PE
Sbjct: 136 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE-TSSVGSKFPVRWSPPE 191
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEMTG-GRKNVDVVDNGSTA 497
V + + S KSD++ +G++++E+ G+ + N TA
Sbjct: 192 VLMYS--KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 141
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFG AK+ +E G + + ++A E I +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 199
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 141
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFG AK+ +E G + + ++A E I +
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 199
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
LG G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 87 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 143
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFG AK+ +E G + + ++A E I +
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 201
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 202 HQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 40/204 (19%)
Query: 321 LGQGGYGSVYKGKLL-DGSNV----AVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
L G +G+VYKG + +G V A+K L + S KE ++E ++ + +V L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 374 LGFCLRVAEEL-----------------SSTIG----------IARGLEYLHLGCSTRIL 406
LG CL +L IG IA+G+ YL R++
Sbjct: 90 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLV 146
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+ N+L+ KI+DFGLAK+ +E G + + ++A E I +
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YT 204
Query: 467 YKSDVYNYGMMIFE-MTGGRKNVD 489
++SDV++YG+ ++E MT G K D
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 35/222 (15%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISR 364
YG +I +F +LG G +G V GK +VA+K++ + + EFI E +
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 75
Query: 365 TSHVNVVALLGFC----------------------------LRVAEELSSTIGIARGLEY 396
SH +V L G C + + L + +EY
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
L S + LH D+ N L+++ K+SDFGL++ E S G++ V + PE
Sbjct: 136 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPE 191
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEMTG-GRKNVDVVDNGSTA 497
V + + S KSD++ +G++++E+ G+ + N TA
Sbjct: 192 VLMYS--KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 35/222 (15%)
Query: 305 YGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISR 364
YG +I +F +LG G +G V GK +VA+K++ + + EFI E +
Sbjct: 7 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 66
Query: 365 TSHVNVVALLGFC----------------------------LRVAEELSSTIGIARGLEY 396
SH +V L G C + + L + +EY
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
L S + LH D+ N L+++ K+SDFGL++ E S G++ V + PE
Sbjct: 127 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPE 182
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEMTG-GRKNVDVVDNGSTA 497
V + + S KSD++ +G++++E+ G+ + N TA
Sbjct: 183 VLMYS--KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ +I+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 220 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 252
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 291 ETFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKG-KLLDGSNVAVKVLNDSK 349
E L RS+ D KK F+ K+GQG G+VY + G VA++ +N +
Sbjct: 3 EEILEKLRSI----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 350 GNGKEFI-NEVASISRTSHVNVVALLGFCLRVAEELSSTIGIARG--------------- 393
KE I NE+ + + N+V L L V +EL + G
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEG 116
Query: 394 ------------LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESI 440
LE+LH S +++H DIK NILL D K++DFG A+I +
Sbjct: 117 QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 441 ISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+M GT ++APEV R K D+++ G+M EM G
Sbjct: 174 STMV---GTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 266 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 298
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 44/214 (20%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL----NDSKGNGKEFINEVASISRTSHVNVVALL 374
KLG GG +VY + + VA+K + + + K F EV + S+ SH N+V+++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 375 GF---------------------------CLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
L V ++ T I G+++ H RI+H
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIVH 134
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DIKP NIL+D + KI DFG+AK + S+ GTV Y +PE + GE +
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSPE---QAKGEATD 190
Query: 468 K-SDVYNYGMMIFEMTGGRKNVDVVDNGSTALDL 500
+ +D+Y+ G++++EM G NG TA+ +
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPF----NGETAVSI 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 96/225 (42%), Gaps = 44/225 (19%)
Query: 291 ETFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKG-KLLDGSNVAVKVLNDSK 349
E L RS+ D KK F+ K+GQG G+VY + G VA++ +N +
Sbjct: 3 EEILEKLRSI----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 350 GNGKEFI-NEVASISRTSHVNVVALLGFCLRVAEELSSTIGIARG--------------- 393
KE I NE+ + + N+V L L V +EL + G
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEG 116
Query: 394 ------------LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESI 440
LE+LH S +++H DIK NILL D K++DFG A+I +
Sbjct: 117 QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 441 ISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
M GT ++APEV R K D+++ G+M EM G
Sbjct: 174 SEMV---GTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 207 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 239
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 209 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 241
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 96/225 (42%), Gaps = 44/225 (19%)
Query: 291 ETFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKG-KLLDGSNVAVKVLNDSK 349
E L RS+ D KK F+ K+GQG G+VY + G VA++ +N +
Sbjct: 3 EEILEKLRSI----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 350 GNGKEFI-NEVASISRTSHVNVVALLGFCLRVAEELSSTIGIARG--------------- 393
KE I NE+ + + N+V L L V +EL + G
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEG 116
Query: 394 ------------LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESI 440
LE+LH S +++H DIK NILL D K++DFG A+I +
Sbjct: 117 QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 441 ISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
M GT ++APEV R K D+++ G+M EM G
Sbjct: 174 SXMV---GTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 96/225 (42%), Gaps = 44/225 (19%)
Query: 291 ETFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKG-KLLDGSNVAVKVLNDSK 349
E L RS+ D KK F+ K+GQG G+VY + G VA++ +N +
Sbjct: 4 EEILEKLRSI----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 58
Query: 350 GNGKEFI-NEVASISRTSHVNVVALLGFCLRVAEELSSTIGIARG--------------- 393
KE I NE+ + + N+V L L V +EL + G
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEG 117
Query: 394 ------------LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESI 440
LE+LH S +++H DIK NILL D K++DFG A+I +
Sbjct: 118 QIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 174
Query: 441 ISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
M GT ++APEV R K D+++ G+M EM G
Sbjct: 175 SXMV---GTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 42/208 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
KLG G +G V+ G + + VAVK L + + F+ E + H +V L +
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 380 ---------------VAEELSSTIG--------------IARGLEYLHLGCSTRILHFDI 410
+ + L S G IA G+ Y+ +H D+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 135
Query: 411 KPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 470
+ N+L+ E KI+DFGLA++ E + GA+ + + APE N G + KS+
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGCFTIKSN 192
Query: 471 VYNYGMMIFEMTG-------GRKNVDVV 491
V+++G++++E+ GR N DV+
Sbjct: 193 VWSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVY--------KGKLLDGSNVAVKVLND--SKGNGKEFINEVASISRT-SHVN 369
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 370 VVALLGFCL------------------------------------RVAEE-------LSS 386
++ LLG C RV EE +S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T +ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE + +++SDV+++G++++E+
Sbjct: 212 RLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEI 244
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 298 RSLSPKRYGYAD---IKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE 354
++ P++ + D + + T +LG G +G V+ G + VAVK L +
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 60
Query: 355 FINEVASISRTSHVNVVALL----------------------------GFCLRVAEELSS 386
F+ E + + H +V L G L + + L
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
IA G+ ++ +H D++ NIL+ + KI+DFGLA++ E + GA
Sbjct: 121 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGA 176
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
+ + + APE N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 177 KFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 228
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 298 RSLSPKRYGYAD---IKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE 354
++ P++ + D + + T +LG G +G V+ G + VAVK L +
Sbjct: 3 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 62
Query: 355 FINEVASISRTSHVNVVALL----------------------------GFCLRVAEELSS 386
F+ E + + H +V L G L + + L
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 122
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
IA G+ ++ +H D++ NIL+ + KI+DFGLA++ E + GA
Sbjct: 123 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGA 178
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
+ + + APE N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 179 KFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 44/230 (19%)
Query: 302 PKRYGYAD---IKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINE 358
P++ + D + + T +LG G +G V+ G + VAVK L + F+ E
Sbjct: 8 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 67
Query: 359 VASISRTSHVNVVALL----------------------------GFCLRVAEELSSTIGI 390
+ + H +V L G L + + L I
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 127
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
A G+ ++ +H D++ NIL+ + KI+DFGLA++ E + GA+ +
Sbjct: 128 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPI 183
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
+ APE N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 184 KWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 231
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 40/194 (20%)
Query: 320 KLGQGGYGSVYKGKL-LDGSNVAVKVLNDS--KGNGKEFINEVASISRTSHVNVVALLGF 376
++G+G +G V+ G+L D + VAVK ++ +F+ E + + SH N+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 377 C----------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
C LRV L A G+EYL C +H
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC---IHR 237
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA--RGTVGYIAPEVFCRNIGEVS 466
D+ N L+ E KISDFG+++ + + + +G + V + APE N G S
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEAL--NYGRYS 293
Query: 467 YKSDVYNYGMMIFE 480
+SDV+++G++++E
Sbjct: 294 SESDVWSFGILLWE 307
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALLGF 376
K+G+G YG VYK K G VA+K + + +G I E++ + H N+V+L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 377 -----CLRVAEEL-----------------SSTIGI-----ARGLEYLHLGCSTRILHFD 409
CL + E S I I RG+ + H RILH D
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRD 144
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+KP N+L++ D K++DFGLA+ + S T T+ Y AP+V +G Y +
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDVL---MGSKKYST 199
Query: 470 --DVYNYGMMIFEMTGGR 485
D+++ G + EM G+
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALLGF 376
K+G+G YG VYK K G VA+K + + +G I E++ + H N+V+L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 377 -----CLRVAEEL-----------------SSTIGI-----ARGLEYLHLGCSTRILHFD 409
CL + E S I I RG+ + H RILH D
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRD 144
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+KP N+L++ D K++DFGLA+ + S T T+ Y AP+V +G Y +
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDVL---MGSKKYST 199
Query: 470 --DVYNYGMMIFEMTGGR 485
D+++ G + EM G+
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 40/194 (20%)
Query: 320 KLGQGGYGSVYKGKL-LDGSNVAVKVLNDS--KGNGKEFINEVASISRTSHVNVVALLGF 376
++G+G +G V+ G+L D + VAVK ++ +F+ E + + SH N+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 377 C----------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
C LRV L A G+EYL C +H
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC---IHR 237
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA--RGTVGYIAPEVFCRNIGEVS 466
D+ N L+ E KISDFG+++ + + + +G + V + APE N G S
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEAL--NYGRYS 293
Query: 467 YKSDVYNYGMMIFE 480
+SDV+++G++++E
Sbjct: 294 SESDVWSFGILLWE 307
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 306 GYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRT 365
G +I +F +LG G +G V GK +VA+K++ + + EFI E +
Sbjct: 1 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL 60
Query: 366 SHVNVVALLGFC----------------------------LRVAEELSSTIGIARGLEYL 397
SH +V L G C + + L + +EYL
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 120
Query: 398 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 457
S + LH D+ N L+++ K+SDFGL++ E S G++ V + PEV
Sbjct: 121 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEV 176
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTG-GRKNVDVVDNGSTA 497
+ + S KSD++ +G++++E+ G+ + N TA
Sbjct: 177 LMYS--KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
++ + T +LG G +G V+ G + VAVK L + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G L + + L IA G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ + KI+DFGLA++ E + GA+ + + APE
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI-- 182
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 35/211 (16%)
Query: 316 SFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
+F +LG G +G V GK +VA+K++ + + EFI E + SH +V L G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 376 FC----------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILH 407
C + + L + +EYL S + LH
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 123
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+ N L+++ K+SDFGL++ E S G++ V + PEV + + S
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS--KFSS 180
Query: 468 KSDVYNYGMMIFEMTG-GRKNVDVVDNGSTA 497
KSD++ +G++++E+ G+ + N TA
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 44/230 (19%)
Query: 302 PKRYGYAD---IKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINE 358
P++ + D + + T +LG G +G V+ G + VAVK L + F+ E
Sbjct: 1 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 60
Query: 359 VASISRTSHVNVVALL----------------------------GFCLRVAEELSSTIGI 390
+ + H +V L G L + + L I
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 120
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
A G+ ++ +H D++ NIL+ + KI+DFGLA++ E + GA+ +
Sbjct: 121 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPI 176
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
+ APE N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 177 KWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 224
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 298 RSLSPKRYGYAD---IKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE 354
++ P++ + D + + T +LG G +G V+ G + VAVK L +
Sbjct: 5 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 64
Query: 355 FINEVASISRTSHVNVVALL----------------------------GFCLRVAEELSS 386
F+ E + + H +V L G L + + L
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 124
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
IA G+ ++ +H D++ NIL+ + KI+DFGLA++ E + GA
Sbjct: 125 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGA 180
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
+ + + APE N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 181 KFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 232
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 306 GYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRT 365
G +I +F +LG G +G V GK +VA+K++ + + EFI E +
Sbjct: 2 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL 61
Query: 366 SHVNVVALLGFC----------------------------LRVAEELSSTIGIARGLEYL 397
SH +V L G C + + L + +EYL
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 398 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 457
S + LH D+ N L+++ K+SDFGL++ E S G++ V + PEV
Sbjct: 122 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEV 177
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTG-GRKNVDVVDNGSTA 497
+ + S KSD++ +G++++E+ G+ + N TA
Sbjct: 178 LMYS--KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 298 RSLSPKRYGYAD---IKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKE 354
++ P++ + D + + T +LG G +G V+ G + VAVK L +
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA 60
Query: 355 FINEVASISRTSHVNVVALL----------------------------GFCLRVAEELSS 386
F+ E + + H +V L G L + + L
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 120
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
IA G+ ++ +H D++ NIL+ + KI+DFGLA++ E + GA
Sbjct: 121 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGA 176
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
+ + + APE N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 177 KFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 228
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
++ + T +LG G +G V+ G + VAVK L + F+ E + + H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G L + + L IA G+ ++
Sbjct: 70 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 127
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ + KI+DFGLA++ E + GA+ + + APE
Sbjct: 128 -ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI-- 183
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 184 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 223
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 44/230 (19%)
Query: 302 PKRYGYAD---IKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINE 358
P++ + D + + T +LG G +G V+ G + VAVK L + F+ E
Sbjct: 4 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 63
Query: 359 VASISRTSHVNVVALL----------------------------GFCLRVAEELSSTIGI 390
+ + H +V L G L + + L I
Sbjct: 64 ANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 123
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
A G+ ++ +H D++ NIL+ + KI+DFGLA++ E + GA+ +
Sbjct: 124 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPI 179
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
+ APE N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 180 KWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 227
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
++ + T +LG G +G V+ G + VAVK L + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G L + + L IA G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ + KI+DFGLA++ E + GA+ + + APE
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI-- 182
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 306 GYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRT 365
G +I +F +LG G +G V GK +VA+K++ + + EFI E +
Sbjct: 2 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL 61
Query: 366 SHVNVVALLGFC----------------------------LRVAEELSSTIGIARGLEYL 397
SH +V L G C + + L + +EYL
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 398 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 457
S + LH D+ N L+++ K+SDFGL++ E S G++ V + PEV
Sbjct: 122 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEV 177
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTG-GRKNVDVVDNGSTA 497
+ + S KSD++ +G++++E+ G+ + N TA
Sbjct: 178 LMYS--KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 42/198 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLN--DSKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G VY G+ +D + A+K L+ + F+ E + +H NV+AL+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 375 GFCL-----------------------------RVAEELSSTIGIARGLEYLHLGCSTRI 405
G L V + +S + +ARG+EYL +
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKF 145
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAK-ICNRK-ESIISMTGARGTVGYIAPEVFCRNIG 463
+H D+ N +LDE F K++DFGLA+ I +R+ S+ AR V + A E
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL--QTY 203
Query: 464 EVSYKSDVYNYGMMIFEM 481
+ KSDV+++G++++E+
Sbjct: 204 RFTTKSDVWSFGVLLWEL 221
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
++ + T +LG G +G V+ G + VAVK L + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G L + + L IA G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ + KI+DFGLA++ E + GA+ + + APE
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI-- 182
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
++ + T +LG G +G V+ G + VAVK L + F+ E + + H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G L + + L IA G+ ++
Sbjct: 64 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 121
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ + KI+DFGLA++ E + GA+ + + APE
Sbjct: 122 -ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI-- 177
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 217
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 13/98 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-- 447
+A GL++LH S I++ D+KP NILLDE+ K++DFGL+ KE+I A
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS-----KEAIDHEKKAYSF 190
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GTV Y+APEV R G S+ +D ++YG+++FEM G
Sbjct: 191 CGTVEYMAPEVVNRQ-GH-SHSADWWSYGVLMFEMLTG 226
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
++ + T +LG G G V+ G + VAVK L + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G L + + L IA G+ ++
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ + KI+DFGLA++ E + GA+ + + APE
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPIKWTAPEAI-- 182
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 40/207 (19%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKG-KLLDGSNVAVKVLNDSKGNGKEFI-NEVASISRTS 366
D KK F+ K+GQG G+VY + G VA++ +N + KE I NE+ +
Sbjct: 18 DPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 367 HVNVVALLGFCLRVAEELSSTIGIARG---------------------------LEYLHL 399
+ N+V L L V +EL + G LE+LH
Sbjct: 77 NPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH- 134
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESIISMTGARGTVGYIAPEVF 458
S +++H +IK NILL D K++DFG A+I + +M GT ++APEV
Sbjct: 135 --SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVV 189
Query: 459 CRNIGEVSYKSDVYNYGMMIFEMTGGR 485
R K D+++ G+M EM G
Sbjct: 190 TRK--AYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 87/215 (40%), Gaps = 58/215 (26%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
LGQG +G V K + LD A+K + ++ ++EV ++ +H VV L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 380 --------VAEELSSTI---------------------------------GIARGLEYLH 398
A + ST+ I L Y+H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII------------SMTGA 446
S I+H D+KP NI +DE KI DFGLAK +R I+ ++T A
Sbjct: 134 ---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
GT Y+A EV G + K D+Y+ G++ FEM
Sbjct: 191 IGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEM 224
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALL----- 374
+LG G +G V+ G + VA+K L + + F+ E + + H +V L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 375 -----------------------GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIK 411
G L++ + +A G+ Y+ +H D++
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLR 132
Query: 412 PHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDV 471
NIL+ KI+DFGLA++ E + GA+ + + APE G + KSDV
Sbjct: 133 SANILVGNGLICKIADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL--YGRFTIKSDV 189
Query: 472 YNYGMMIFEM-TGGR 485
+++G+++ E+ T GR
Sbjct: 190 WSFGILLTELVTKGR 204
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 87/215 (40%), Gaps = 58/215 (26%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
LGQG +G V K + LD A+K + ++ ++EV ++ +H VV L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 380 --------VAEELSSTI---------------------------------GIARGLEYLH 398
A + ST+ I L Y+H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII------------SMTGA 446
S I+H D+KP NI +DE KI DFGLAK +R I+ ++T A
Sbjct: 134 ---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
GT Y+A EV G + K D+Y+ G++ FEM
Sbjct: 191 IGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEM 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 245
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 48/202 (23%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVA---VKVLNDSKGNGKEFINEVASISRTS---HVNVVA 372
++G G YG+VYK + G VA V+V N +G + EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 373 LLGFCL--RVAEELSSTI-------------------------------GIARGLEYLHL 399
L+ C R E+ T+ RGL++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 459
C I+H D+KP NIL+ K++DFGLA+I + + ++ + T+ Y APEV
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV---VTLWYRAPEVLL 184
Query: 460 RNIGEVSYKSDVYNYGMMIFEM 481
++ + D+++ G + EM
Sbjct: 185 QST--YATPVDMWSVGCIFAEM 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 44/208 (21%)
Query: 309 DIKKMTNSFKYKLGQGGYGSV-YKGKLLDGSNVAVKVLNDSKGNGKEFI-NEVASISRTS 366
D + + +S+ K+G+G G V + G VAVK+++ K +E + NEV +
Sbjct: 42 DPRLLLDSY-VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100
Query: 367 HVNVV-------------ALLGFC-----------LRVAEELSSTI--GIARGLEYLHLG 400
H NVV L+ F +R+ EE +T+ + + L YLH
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH-- 158
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPE 456
+ ++H DIK +ILL D K+SDFG ++K +++ ++ GT ++APE
Sbjct: 159 -AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV------GTPYWMAPE 211
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
V R++ + + D+++ G+M+ EM G
Sbjct: 212 VISRSL--YATEVDIWSLGIMVIEMVDG 237
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 53/205 (25%)
Query: 320 KLGQGGYGSVYKGKLLD--GSNVA---VKVLNDSKGNGKEFINEVASISRTS---HVNVV 371
++G+G YG V+K + L G VA V+V +G I EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 372 ALLGFCL---------------RVAEELSSTIG------------------IARGLEYLH 398
L C V ++L++ + + RGL++LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
S R++H D+KP NIL+ K++DFGLA+I + + +++T T+ Y APEV
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVL 191
Query: 459 CRNIGEVSYKS--DVYNYGMMIFEM 481
++ SY + D+++ G + EM
Sbjct: 192 LQS----SYATPVDLWSVGCIFAEM 212
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 50/207 (24%)
Query: 321 LGQGGYGSVYKGKLL--DGSN--VAVKVL---NDSKGNGKEFINEVASISRTSHVNVVAL 373
LG+G +GSV +G L DG++ VAVK + N S+ +EF++E A + SH NV+ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 374 LGFCLRVAEE--------------------------------------LSSTIGIARGLE 395
LG C+ ++ + L + IA G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 396 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 455
YL + LH D+ N +L +D ++DFGL+K + A+ V +IA
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEMT 482
E + + KSDV+ +G+ ++E+
Sbjct: 219 ESLADRV--YTSKSDVWAFGVTMWEIA 243
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 48/202 (23%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVA---VKVLNDSKGNGKEFINEVASISRTS---HVNVVA 372
++G G YG+VYK + G VA V+V N +G + EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 373 LLGFCL--RVAEELSSTI-------------------------------GIARGLEYLHL 399
L+ C R E+ T+ RGL++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 459
C I+H D+KP NIL+ K++DFGLA+I + + +++ T+ Y APEV
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTLWYRAPEVLL 184
Query: 460 RNIGEVSYKSDVYNYGMMIFEM 481
++ + D+++ G + EM
Sbjct: 185 QST--YATPVDMWSVGCIFAEM 204
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 198 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 230
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 53/205 (25%)
Query: 320 KLGQGGYGSVYKGKLLD--GSNVA---VKVLNDSKGNGKEFINEVASISRTS---HVNVV 371
++G+G YG V+K + L G VA V+V +G I EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 372 ALLGFCL---------------RVAEELSSTIG------------------IARGLEYLH 398
L C V ++L++ + + RGL++LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
S R++H D+KP NIL+ K++DFGLA+I + + +++T T+ Y APEV
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVL 191
Query: 459 CRNIGEVSYKS--DVYNYGMMIFEM 481
++ SY + D+++ G + EM
Sbjct: 192 LQS----SYATPVDLWSVGCIFAEM 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 195 VGTAQYVSPELLTEK--SASKSSDLWALGCIIYQLVAG 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 202 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 234
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
++ + T +LG G +G V+ G + VAVK L + F+ E + + H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 369 NVVALL----------------------------GFCLRVAEELSSTIGIARGLEYLHLG 400
+V L G L + + L IA G+ ++
Sbjct: 65 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 122
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H +++ NIL+ + KI+DFGLA++ E + GA+ + + APE
Sbjct: 123 -ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI-- 178
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR------KNVDVVDN 493
N G + KSDV+++G+++ E+ T GR N +V+ N
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 53/205 (25%)
Query: 320 KLGQGGYGSVYKGKLLD--GSNVA---VKVLNDSKGNGKEFINEVASISRTS---HVNVV 371
++G+G YG V+K + L G VA V+V +G I EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 372 ALLGFCL---------------RVAEELSSTIG------------------IARGLEYLH 398
L C V ++L++ + + RGL++LH
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
S R++H D+KP NIL+ K++DFGLA+I + + +++T T+ Y APEV
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVL 191
Query: 459 CRNIGEVSYKS--DVYNYGMMIFEM 481
++ SY + D+++ G + EM
Sbjct: 192 LQS----SYATPVDLWSVGCIFAEM 212
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 206 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 205 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 237
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 47/200 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG--- 375
KLG+G YGSVYK + G VA+K + + + +E I E++ + + +VV G
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 376 ----------FC----------LR--------VAEELSSTIGIARGLEYLHLGCSTRILH 407
+C LR +A L ST+ +GLEYLH R +H
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL---KGLEYLHF---MRKIH 148
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DIK NILL+ + K++DFG+A + + GT ++APEV I E+ Y
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEV----IQEIGY 202
Query: 468 K--SDVYNYGMMIFEMTGGR 485
+D+++ G+ EM G+
Sbjct: 203 NCVADIWSLGITAIEMAEGK 222
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ +G Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEIL---LGXKYY 181
Query: 468 KS--DVYNYGMMIFEMTGGR 485
+ D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 180
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 245
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 133
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ +G Y
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEIL---LGXKYY 188
Query: 468 KS--DVYNYGMMIFEMTGGR 485
+ D+++ G + EM R
Sbjct: 189 STAVDIWSLGCIFAEMVTRR 208
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 53/208 (25%)
Query: 321 LGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVA------- 372
+G G YG VYKG+ + G A+KV++ + +E E+ + + SH +A
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 373 -------------LLGFCL--RVAEELSSTIG--------------IARGLEYLHLGCST 403
++ FC V + + +T G I RGL +LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QH 148
Query: 404 RILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVF- 458
+++H DIK N+LL E+ K+ DFG L + R+ + I GT ++APEV
Sbjct: 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI------GTPYWMAPEVIA 202
Query: 459 CRNIGEVSY--KSDVYNYGMMIFEMTGG 484
C + +Y KSD+++ G+ EM G
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 245
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 48/202 (23%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVA---VKVLNDSKGNGKEFINEVASISRTS---HVNVVA 372
++G G YG+VYK + G VA V+V N +G + EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 373 LLGFCL--RVAEELSSTI-------------------------------GIARGLEYLHL 399
L+ C R E+ T+ RGL++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 459
C I+H D+KP NIL+ K++DFGLA+I + + +++ T+ Y APEV
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYRAPEVLL 184
Query: 460 RNIGEVSYKSDVYNYGMMIFEM 481
++ + D+++ G + EM
Sbjct: 185 QST--YATPVDMWSVGCIFAEM 204
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 47/201 (23%)
Query: 321 LGQGGYGSVYKGKLLDGSNV----AVKVLNDSKGNGKEFIN---EVASISRTSHVNVVAL 373
LGQG +G V+ K + GS+ A+KVL + ++ + E + +H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 374 -------------LGFC------LRVAEELSST--------IGIARGLEYLHLGCSTRIL 406
L F R+++E+ T +A L++LH S I+
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGII 148
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPEVFCRNIG 463
+ D+KP NILLDE+ K++DFGL+ KESI A GTV Y+APEV R
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLS-----KESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 464 EVSYKSDVYNYGMMIFEMTGG 484
S +D +++G+++FEM G
Sbjct: 204 TQS--ADWWSFGVLMFEMLTG 222
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+ L+YL + RI+H D+KP NILLDE I+DF +A + R+ I +M GT
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA---GT 177
Query: 450 VGYIAPEVFCRNIGE-VSYKSDVYNYGMMIFEMTGGRK 486
Y+APE+F G S+ D ++ G+ +E+ GR+
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 59/215 (27%)
Query: 321 LGQGGYGSVYKGKLL----DGSN----VAVKVL--NDSKGNGKEFINEVASISRT-SHVN 369
LG+G +G V + + D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 370 VVALLGFCLR-------------------------------------VAEELSS------ 386
++ LLG C + E+LSS
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R V ++APE I +++SDV+++G++++E+
Sbjct: 254 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEI 286
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 39/208 (18%)
Query: 311 KKMTNSFKYK--LGQGGYGSVYKGKLLDGS-NVAVKVLNDS---KGNGKEFIN-EVASIS 363
KK FK+ LG+G + +V + L S A+K+L K N ++ E +S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 364 RTSHVNVVALL------------------GFCLRVAEELSS---------TIGIARGLEY 396
R H V L G L+ ++ S T I LEY
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 125
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
LH I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE
Sbjct: 126 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ S SD++ G +I+++ G
Sbjct: 183 LLTEKSACKS--SDLWALGCIIYQLVAG 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 47/201 (23%)
Query: 321 LGQGGYGSVYKGKLLDGSNV----AVKVLNDSKGNGKEFIN---EVASISRTSHVNVVAL 373
LGQG +G V+ K + GS+ A+KVL + ++ + E + +H +V L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 374 -------------LGFC------LRVAEELSST--------IGIARGLEYLHLGCSTRIL 406
L F R+++E+ T +A L++LH S I+
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGII 149
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPEVFCRNIG 463
+ D+KP NILLDE+ K++DFGL+ KESI A GTV Y+APEV R
Sbjct: 150 YRDLKPENILLDEEGHIKLTDFGLS-----KESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 464 EVSYKSDVYNYGMMIFEMTGG 484
S +D +++G+++FEM G
Sbjct: 205 TQS--ADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 47/201 (23%)
Query: 321 LGQGGYGSVYKGKLLDGSNV----AVKVLNDSKGNGKEFIN---EVASISRTSHVNVVAL 373
LGQG +G V+ K + GS+ A+KVL + ++ + E + +H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 374 -------------LGFC------LRVAEELSST--------IGIARGLEYLHLGCSTRIL 406
L F R+++E+ T +A L++LH S I+
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGII 148
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPEVFCRNIG 463
+ D+KP NILLDE+ K++DFGL+ KESI A GTV Y+APEV R
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLS-----KESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 464 EVSYKSDVYNYGMMIFEMTGG 484
S +D +++G+++FEM G
Sbjct: 204 TQS--ADWWSFGVLMFEMLTG 222
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 180
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLG G +G V+ + VAVK + + + F+ E + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 369 NVVALLGFCLR--------------VAEELSSTIG--------------IARGLEYLHLG 400
+V L + + + L S G IA G+ ++
Sbjct: 71 KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE-- 128
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ KI+DFGLA++ E + GA+ + + APE
Sbjct: 129 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI-- 184
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR 485
N G + KSDV+++G+++ E+ T GR
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 195 VGTAQYVSPELLTEKSAXKS--SDLWALGCIIYQLVAG 230
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 180
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 130
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 185
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 39/208 (18%)
Query: 311 KKMTNSFKYK--LGQGGYGSVYKGKLLDGS-NVAVKVLNDS---KGNGKEFIN-EVASIS 363
KK FK+ LG+G + +V + L S A+K+L K N ++ E +S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 364 RTSHVNVVALL------------------GFCLRVAEELSS---------TIGIARGLEY 396
R H V L G L+ ++ S T I LEY
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 124
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
LH I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE
Sbjct: 125 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ S SD++ G +I+++ G
Sbjct: 182 LLTEKSACKS--SDLWALGCIIYQLVAG 207
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 133
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 188
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 189 STAVDIWSLGCIFAEMVTRR 208
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 42/203 (20%)
Query: 321 LGQGGYGSVYKGKLLDGSN-----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVAL 373
+G G +G VYKG L S VA+K L ++ +F+ E + + SH N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 374 LGFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRI 405
G + V + + GIA G++YL +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNY 168
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGE 464
+H D+ NIL++ + K+SDFGL+++ + E+ + +G + + + APE +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR--K 226
Query: 465 VSYKSDVYNYGMMIFE-MTGGRK 486
+ SDV+++G++++E MT G +
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGER 249
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 39/208 (18%)
Query: 311 KKMTNSFKYK--LGQGGYGSVYKGKLLDGS-NVAVKVLNDS---KGNGKEFIN-EVASIS 363
KK FK+ LG+G + +V + L S A+K+L K N ++ E +S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 364 RTSHVNVVALL------------------GFCLRVAEELSS---------TIGIARGLEY 396
R H V L G L+ ++ S T I LEY
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 123
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
LH I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE
Sbjct: 124 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ S SD++ G +I+++ G
Sbjct: 181 LLTEKSACKS--SDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 39/208 (18%)
Query: 311 KKMTNSFKYK--LGQGGYGSVYKGKLLDGS-NVAVKVLNDS---KGNGKEFIN-EVASIS 363
KK FK+ LG+G + +V + L S A+K+L K N ++ E +S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 364 RTSHVNVVALL------------------GFCLRVAEELSS---------TIGIARGLEY 396
R H V L G L+ ++ S T I LEY
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 122
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
LH I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE
Sbjct: 123 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ S SD++ G +I+++ G
Sbjct: 180 LLTEKSACKS--SDLWALGCIIYQLVAG 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 182
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLG G +G V+ + VAVK + + + F+ E + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 369 NVVALLGFCLR--------------VAEELSSTIG--------------IARGLEYLHLG 400
+V L + + + L S G IA G+ ++
Sbjct: 244 KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE-- 301
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ KI+DFGLA++ E + GA+ + + APE
Sbjct: 302 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI-- 357
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR 485
N G + KSDV+++G+++ E+ T GR
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 35 IGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 149
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 203
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 68/247 (27%)
Query: 308 ADIKKMTNS---FKYKLGQGGYGSVYKGKLL------DGSNVAVKVLNDSKGNG---KEF 355
A +K+++ S F +LG+ +G VYKG L VA+K L D K G +EF
Sbjct: 18 AKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEF 76
Query: 356 INEVASISRTSHVNVVALLGFCLR--------------------VAEELSSTIG------ 389
+E +R H NVV LLG + V S +G
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 390 -----------------IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 432
IA G+EYL S ++H D+ N+L+ + KISD GL +
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 433 ICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTG-------GR 485
+ + + + ++APE G+ S SD+++YG++++E+ G
Sbjct: 194 EVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251
Query: 486 KNVDVVD 492
N DVV+
Sbjct: 252 SNQDVVE 258
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 193 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 228
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVA---VKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA +++ +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVA---VKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA +++ +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+ C+
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKY---Y 180
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 149
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 203
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 321 LGQGGYGSVYKGKLLDGS-NVAVKVLNDS---KGNGKEFIN-EVASISRTSHVNVVALLG 375
LG+G + +V + L S A+K+L K N ++ E +SR H V L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 376 FCLRVAEELS----------------------------STIGIARGLEYLHLGCSTRILH 407
FC + E+L T I LEYLH I+H
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIH 160
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+ S
Sbjct: 161 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS- 219
Query: 468 KSDVYNYGMMIFEMTGG 484
SD++ G +I+++ G
Sbjct: 220 -SDLWALGCIIYQLVAG 235
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 155
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 209
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 184
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 139 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 196 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 231
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 42/198 (21%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLN-DSKGNGKEFINEVASISRTSHVNVVALLG-- 375
+LG G +G VYK K + G+ A KV+ S+ +++I E+ ++ H +V LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 376 -----------FCLRVAEELSSTIGIARG-------------LEYLHLGCSTRILHFDIK 411
FC A + + + + RG LE L+ S RI+H D+K
Sbjct: 86 YHDGKLWIMIEFCPGGAVD-AIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
Query: 412 PHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPE-VFCRNIGEV- 465
N+L+ + +++DFG++ K +++S I GT ++APE V C + +
Sbjct: 145 AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCETMKDTP 198
Query: 466 -SYKSDVYNYGMMIFEMT 482
YK+D+++ G+ + EM
Sbjct: 199 YDYKADIWSLGITLIEMA 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 146
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 200
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 150
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 204
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 150
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 204
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV Y K G +AVK L+ S + K E+ + H NV+ LL
Sbjct: 59 VGSGAYGSVCSSYDVK--SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 375 GF-----------------------------CLRVAEELSSTI--GIARGLEYLHLGCST 403
C ++ ++ + I RGL+Y+H S
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 173
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 227
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGR 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 135 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 192 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 154
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 208
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGR 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 42/198 (21%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVL-NDSKGNGKEFINEVASISRTSHVNVVALLG-- 375
+LG G +G VYK K + G+ A KV+ S+ +++I E+ ++ H +V LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 376 -----------FCLRVAEELSSTIGIARG-------------LEYLHLGCSTRILHFDIK 411
FC A + + + + RG LE L+ S RI+H D+K
Sbjct: 78 YHDGKLWIMIEFCPGGAVD-AIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 136
Query: 412 PHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPE-VFCRNIGEV- 465
N+L+ + +++DFG++ K +++S I GT ++APE V C + +
Sbjct: 137 AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCETMKDTP 190
Query: 466 -SYKSDVYNYGMMIFEMT 482
YK+D+++ G+ + EM
Sbjct: 191 YDYKADIWSLGITLIEMA 208
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I GLE+LH I++ D+KP N+LLD+D +ISD GLA K G
Sbjct: 295 TAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGY 349
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT G++APE+ E + D + G+ ++EM R
Sbjct: 350 AGTPGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 95/235 (40%), Gaps = 65/235 (27%)
Query: 317 FKYKLGQGGYGSVYKGKLL------DGSNVAVKVLNDSKGNG---KEFINEVASISRTSH 367
F +LG+ +G VYKG L VA+K L D K G +EF +E +R H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAMLRARLQH 71
Query: 368 VNVVALLGFCLR--------------------VAEELSSTIG------------------ 389
NVV LLG + V S +G
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 390 -----IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMT 444
IA G+EYL S ++H D+ N+L+ + KISD GL + + +
Sbjct: 132 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 445 GARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTG-------GRKNVDVVD 492
+ + ++APE G+ S SD+++YG++++E+ G N DVV+
Sbjct: 189 NSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 241
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I GLE+LH I++ D+KP N+LLD+D +ISD GLA K G
Sbjct: 295 TAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGY 349
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT G++APE+ E + D + G+ ++EM R
Sbjct: 350 AGTPGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I GLE+LH I++ D+KP N+LLD+D +ISD GLA K G
Sbjct: 295 TAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGY 349
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT G++APE+ E + D + G+ ++EM R
Sbjct: 350 AGTPGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 140
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 194
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 193 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 195 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 195 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 195 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 193 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 193 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 228
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I GLE+LH I++ D+KP N+LLD+D +ISD GLA K G
Sbjct: 295 TAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGY 349
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT G++APE+ E + D + G+ ++EM R
Sbjct: 350 AGTPGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 139 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 196 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 231
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L L G VA+K L ++ ++F+ E + + + H NVV L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G R V + + GIA G+ YL +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYV 167
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E++ + TG + V + APE +
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI--QYRKF 225
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 226 TSASDVWSYGIVMWEV 241
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 44/200 (22%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKV--LNDSKGNGKEFINEVASISRTSHVNVVALLGF 376
KLG+G Y +VYKGK L + VA+K L +G I EV+ + H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 377 ------CLRVAEELSSTIG---------------------IARGLEYLHLGCSTRILHFD 409
V E L + + RGL Y H ++LH D
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRD 125
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMT--GARGTVGYIAPEVFCRNIGEVSY 467
+KP N+L++E K++DFGLA R +SI + T T+ Y P++ +G Y
Sbjct: 126 LKPQNLLINERGELKLADFGLA----RAKSIPTKTYDNEVVTLWYRPPDIL---LGSTDY 178
Query: 468 KS--DVYNYGMMIFEMTGGR 485
+ D++ G + +EM GR
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 141 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ SD++ G +I+++ G
Sbjct: 198 VGTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 138 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ SD++ G +I+++ G
Sbjct: 195 VGTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 120 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 177 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 320 KLGQGGYGSVY--KGKLLDGSNVAVKVLND---SKGNGKEFINEVASISRTSHVNVVALL 374
KLG G YG V + K+ A+K++ S + + + EVA + H N++ L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVER-AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 375 GF------------CLRVAE------------ELSSTIGIAR---GLEYLHLGCSTRILH 407
F C + E E+ + + I + G+ YLH I+H
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVH 159
Query: 408 FDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
D+KP N+LL ++D KI DFGL+ + ++ M GT YIAPEV + E
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLRKKYDE 216
Query: 465 VSYKSDVYNYGMMIFEMTGG 484
K DV++ G+++F + G
Sbjct: 217 ---KCDVWSIGVILFILLAG 233
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + +
Sbjct: 135 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y++PE+ S SD++ G +I+++ G
Sbjct: 192 VGTAQYVSPELLTEKSACKS--SDLWALGCIIYQLVAG 227
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH---SA 140
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 194
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 180
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 180
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 163
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 217
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 150
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 204
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 45/201 (22%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKV-----LNDSKGNGKEFINEVASISRTSHVNVVAL 373
K+G+G + VY+ LLDG VA+K L D+K + I E+ + + +H NV+
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA-DCIKEIDLLKQLNHPNVIKY 97
Query: 374 ---------LGFCLRVAE--ELSSTIG--------------------IARGLEYLHLGCS 402
L L +A+ +LS I + LE++H S
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---S 154
Query: 403 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 462
R++H DIKP N+ + K+ D GL + + K + + GT Y++PE N
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHEN- 211
Query: 463 GEVSYKSDVYNYGMMIFEMTG 483
++KSD+++ G +++EM
Sbjct: 212 -GYNFKSDIWSLGCLLYEMAA 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 149
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 203
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 164
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 218
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 29 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 143
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 197
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 151
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 205
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 57/215 (26%)
Query: 317 FKYKLGQGGYGSVYKGKLL-DG--SNVAVKVLND--SKGNGKEFINEVASISRTSH-VNV 370
F+ +G+G +G V K ++ DG + A+K + + SK + ++F E+ + + H N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 371 VALLGFC---------------------LR------------VAEELSSTIG-------- 389
+ LLG C LR +A +ST+
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 390 --IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+ARG++YL + +H D+ NIL+ E++ KI+DFGL++ +E + T R
Sbjct: 139 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
V ++A E N + SDV++YG++++E+
Sbjct: 193 LPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 225
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 183
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NAM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 149
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 203
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 141
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 195
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 182
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 141
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 195
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 150
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 204
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 146
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 200
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 140
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 194
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 146
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 200
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 57/215 (26%)
Query: 317 FKYKLGQGGYGSVYKGKLL-DG--SNVAVKVLND--SKGNGKEFINEVASISRTSH-VNV 370
F+ +G+G +G V K ++ DG + A+K + + SK + ++F E+ + + H N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 371 VALLGFC---------------------LR------------VAEELSSTIG-------- 389
+ LLG C LR +A +ST+
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 390 --IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+ARG++YL + +H D+ NIL+ E++ KI+DFGL++ +E + T R
Sbjct: 149 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
V ++A E N + SDV++YG++++E+
Sbjct: 203 LPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 235
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 184
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 184
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 183
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 182
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 146
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 200
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 184
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 130
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 185
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTK--TGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 156
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 210
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
GLE LH RI++ D+KP NILLD+ +ISD GLA ++I G GTVGY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVGY 351
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+APEV ++ D + G +++EM G+
Sbjct: 352 MAPEVVKNE--RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 28 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 142
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 196
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGR 218
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 129 RDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 183
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 73 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 184
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 156
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 210
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 156
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 210
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 130 RDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 184
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 155
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 209
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 164
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 218
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 182
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 151
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA + + MTG T Y APE+ N
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML-NWM 205
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 182
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
GLE LH RI++ D+KP NILLD+ +ISD GLA ++I G GTVGY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVGY 351
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+APEV ++ D + G +++EM G+
Sbjct: 352 MAPEVVKNE--RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 163
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 217
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 151
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA + + MTG T Y APE+ N
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML-NWM 205
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 85/214 (39%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
LGQG +G V K + LD A+K + ++ ++EV ++ +H VV L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 380 --------VAEELSSTI---------------------------------GIARGLEYLH 398
A + ST+ I L Y+H
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 399 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII------------SMTGA 446
S I+H ++KP NI +DE KI DFGLAK +R I+ ++T A
Sbjct: 134 ---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
GT Y+A EV G + K D Y+ G++ FE
Sbjct: 191 IGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFE 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 167
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+ N
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 221
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 72 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 183
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 49/206 (23%)
Query: 317 FKYKLGQGGYGSVY-KGKLLDGSNVAVKVLNDSKGN--GKEFINEVASISRTSHVNVVAL 373
FK KLG G +G V+ + G +K +N + ++ E+ + H N++ +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 374 ---------LGFCLRVAE--ELSSTI--GIARG------------------LEYLHLGCS 402
+ + E EL I ARG L Y H S
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---S 142
Query: 403 TRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
++H D+KP NIL +D P KI DFGLA++ E T A GT Y+APEVF
Sbjct: 143 QHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVF 198
Query: 459 CRNIGEVSYKSDVYNYG-MMIFEMTG 483
R+ V++K D+++ G +M F +TG
Sbjct: 199 KRD---VTFKCDIWSAGVVMYFLLTG 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 151
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA + + MTG T Y APE+ N
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML-NWM 205
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 44/192 (22%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVK-VLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
+G+G +G V G G+ VAVK + ND+ + F+ E + +++ H N+V LLG +
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 380 -------VAEELSS-----------------------TIGIARGLEYLHLGCSTRILHFD 409
V E ++ ++ + +EYL +H D
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 314
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+ N+L+ ED K+SDFGL KE+ + + V + APE + S KS
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK--KFSTKS 367
Query: 470 DVYNYGMMIFEM 481
DV+++G++++E+
Sbjct: 368 DVWSFGILLWEI 379
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 44/192 (22%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVK-VLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
+G+G +G V G G+ VAVK + ND+ + F+ E + +++ H N+V LLG +
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 380 -------VAEELSS-----------------------TIGIARGLEYLHLGCSTRILHFD 409
V E ++ ++ + +EYL +H D
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 127
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+ N+L+ ED K+SDFGL KE+ + + V + APE + S KS
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK--KFSTKS 180
Query: 470 DVYNYGMMIFEM 481
DV+++G++++E+
Sbjct: 181 DVWSFGILLWEI 192
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 46/200 (23%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVVALLG-- 375
+LG G +G VYK + + S +A + D+K + +++ E+ ++ H N+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 376 -----------FC---------LRVAEELS-STIGIA-----RGLEYLHLGCSTRILHFD 409
FC L + L+ S I + L YLH +I+H D
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRD 160
Query: 410 IKPHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPE-VFCRNIGE 464
+K NIL D K++DFG++ + R++S I GT ++APE V C +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI------GTPYWMAPEVVMCETSKD 214
Query: 465 --VSYKSDVYNYGMMIFEMT 482
YK+DV++ G+ + EM
Sbjct: 215 RPYDYKADVWSLGITLIEMA 234
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+G+G YG VYK + L G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 376 FC----------------LRVAEELSSTIGIA------------RGLEYLHLGCSTRILH 407
L+ + S+ GI +GL + H S R+LH
Sbjct: 70 VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEV 465
D+KP N+L++ + K++DFGLA+ + + T+ Y APE+ C+
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKY---Y 181
Query: 466 SYKSDVYNYGMMIFEMTGGR 485
S D+++ G + EM R
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 384 LSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 443
+S + +ARG+E+L S + +H D+ NILL E+ KI DFGLA+ + +
Sbjct: 202 ISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 444 TGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R + ++APE I S KSDV++YG++++E+
Sbjct: 259 GDTRLPLKWMAPESIFDKI--YSTKSDVWSYGVLLWEI 294
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 54/210 (25%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 372 ALLGFC----------------------------------------LRVAEELSSTIGIA 391
LLG C L + + + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 392 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 451
+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 452 YIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
++APE + + +SDV+++G++++E+
Sbjct: 212 WMAPETIFDRV--YTIQSDVWSFGVLLWEI 239
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 46/200 (23%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVVALLG-- 375
+LG G +G VYK + + S +A + D+K + +++ E+ ++ H N+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 376 -----------FC---------LRVAEELS-STIGIA-----RGLEYLHLGCSTRILHFD 409
FC L + L+ S I + L YLH +I+H D
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRD 160
Query: 410 IKPHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPE-VFCRNIGE 464
+K NIL D K++DFG++ + R++S I GT ++APE V C +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI------GTPYWMAPEVVMCETSKD 214
Query: 465 --VSYKSDVYNYGMMIFEMT 482
YK+DV++ G+ + EM
Sbjct: 215 RPYDYKADVWSLGITLIEMA 234
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 43/207 (20%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNV-AVKVLN----DSKGNGKEFINEVASIS 363
D +K+ + + ++G G +G+VY + + S V A+K ++ S ++ I EV +
Sbjct: 51 DPEKLFSDLR-EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 364 RTSHVNVVALLG-------------FCLRVAEEL--------------SSTIGIARGLEY 396
+ H N + G +CL A +L + T G +GL Y
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
LH S ++H D+K NILL E K+ DFG A I + GT ++APE
Sbjct: 170 LH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPE 220
Query: 457 V-FCRNIGEVSYKSDVYNYGMMIFEMT 482
V + G+ K DV++ G+ E+
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 44/192 (22%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVK-VLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
+G+G +G V G G+ VAVK + ND+ + F+ E + +++ H N+V LLG +
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 380 -------VAEELSS-----------------------TIGIARGLEYLHLGCSTRILHFD 409
V E ++ ++ + +EYL +H D
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 142
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+ N+L+ ED K+SDFGL KE+ + + V + APE + S KS
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK--KFSTKS 195
Query: 470 DVYNYGMMIFEM 481
DV+++G++++E+
Sbjct: 196 DVWSFGILLWEI 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI D+GLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 45/206 (21%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHV 368
+I + + + KLG G +G V+ + VAVK + + + F+ E + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 369 NVVALLGFCLR--------------VAEELSSTIG--------------IARGLEYLHLG 400
+V L + + + L S G IA G+ ++
Sbjct: 238 KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE-- 295
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 460
+H D++ NIL+ KI+DFGLA++ GA+ + + APE
Sbjct: 296 -QRNYIHRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAI-- 341
Query: 461 NIGEVSYKSDVYNYGMMIFEM-TGGR 485
N G + KSDV+++G+++ E+ T GR
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 320 KLGQGGYGSVYKGKLLDGSNV-AVKVLN----DSKGNGKEFINEVASISRTSHVNVVALL 374
++G G +G+VY + + S V A+K ++ S ++ I EV + + H N +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 375 G-------------FCLRVAEEL--------------SSTIGIARGLEYLHLGCSTRILH 407
G +CL A +L + T G +GL YLH S ++H
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIH 138
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV-FCRNIGEVS 466
D+K NILL E K+ DFG A I + GT ++APEV + G+
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMDEGQYD 192
Query: 467 YKSDVYNYGMMIFEMT 482
K DV++ G+ E+
Sbjct: 193 GKVDVWSLGITCIELA 208
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 44/199 (22%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKE--FINEVASISRT 365
DIKK+ FK LG G + V + G AVK + GKE NE+A + +
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 366 SHVNVVAL---------LGFCL----------RVAE-----ELSSTIGIARGLEYLHLGC 401
H N+VAL L + R+ E E ++ I + L+ ++
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
Query: 402 STRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 458
I+H D+KP N+L DE+ ISDFGL+K+ + + M+ A GT GY+APEV
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTACGTPGYVAPEVL 194
Query: 459 ----------CRNIGEVSY 467
C +IG ++Y
Sbjct: 195 AQKPYSKAVDCWSIGVIAY 213
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
LG+G +G V K K + AVKV+N + K+ + EV + + H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 377 C-------------------------LRVAEELSSTI--GIARGLEYLHLGCSTRILHFD 409
R +E ++ I + G+ Y+H I+H D
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRD 146
Query: 410 IKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP NILL ++D KI DFGL+ C ++ + M GT YIAPEV G
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS-TCFQQNT--KMKDRIGTAYYIAPEVLR---GTYD 200
Query: 467 YKSDVYNYGMMIFEMTG------GRKNVDV---VDNGSTALDLQASR 504
K DV++ G++++ + G+ D+ V+ G A DL R
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
LG+G +G V K K + AVKV+N + K+ + EV + + H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 377 C-------------------------LRVAEELSSTI--GIARGLEYLHLGCSTRILHFD 409
R +E ++ I + G+ Y+H I+H D
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRD 146
Query: 410 IKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP NILL ++D KI DFGL+ C ++ + M GT YIAPEV G
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS-TCFQQNT--KMKDRIGTAYYIAPEVLR---GTYD 200
Query: 467 YKSDVYNYGMMIFEMTG------GRKNVDV---VDNGSTALDLQASR 504
K DV++ G++++ + G+ D+ V+ G A DL R
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 164
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+ N
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIML-NWM 218
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 40/209 (19%)
Query: 308 ADIKKMTNSFKYK-LGQGGYGSVYKGKLL-DGSNVAV----KVLNDSKGNG--KEFINEV 359
A I K T K K LG G +G+V+KG + +G ++ + KV+ D G + + +
Sbjct: 25 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHM 84
Query: 360 ASISRTSHVNVVALLGFC----LRVAEE-----------------------LSSTIGIAR 392
+I H ++V LLG C L++ + L+ + IA+
Sbjct: 85 LAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 144
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+ YL ++H ++ N+LL +++DFG+A + + + + A+ + +
Sbjct: 145 GMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+A E + G+ +++SDV++YG+ ++E+
Sbjct: 202 MALESI--HFGKYTHQSDVWSYGVTVWEL 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 140
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+ N
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIML-NWM 194
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 44/192 (22%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVK-VLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
+G+G +G V G G+ VAVK + ND+ + F+ E + +++ H N+V LLG +
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 380 -------VAEELSS-----------------------TIGIARGLEYLHLGCSTRILHFD 409
V E ++ ++ + +EYL +H D
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 133
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+ N+L+ ED K+SDFGL KE+ + + V + APE S KS
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALRE--AAFSTKS 186
Query: 470 DVYNYGMMIFEM 481
DV+++G++++E+
Sbjct: 187 DVWSFGILLWEI 198
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 56/212 (26%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 372 ALLGFC------------------------------------------LRVAEELSSTIG 389
LLG C L + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 214 LKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 243
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 40/209 (19%)
Query: 308 ADIKKMTNSFKYK-LGQGGYGSVYKGKLL-DGSNVAV----KVLNDSKGNG--KEFINEV 359
A I K T K K LG G +G+V+KG + +G ++ + KV+ D G + + +
Sbjct: 7 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHM 66
Query: 360 ASISRTSHVNVVALLGFC----LRVAEE-----------------------LSSTIGIAR 392
+I H ++V LLG C L++ + L+ + IA+
Sbjct: 67 LAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 126
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+ YL ++H ++ N+LL +++DFG+A + + + + A+ + +
Sbjct: 127 GMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+A E + G+ +++SDV++YG+ ++E+
Sbjct: 184 MALESI--HFGKYTHQSDVWSYGVTVWEL 210
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 51/205 (24%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEF------INEVASISRTS---HVN 369
++G G YG+VYK + G VA+K + G G + EVA + R H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 370 VVALLGFCL--RVAEELSSTI-------------------------------GIARGLEY 396
VV L+ C R E+ T+ RGL++
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
LH C I+H D+KP NIL+ K++DFGLA+I + + +++T T+ Y APE
Sbjct: 136 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVVVTLWYRAPE 189
Query: 457 VFCRNIGEVSYKSDVYNYGMMIFEM 481
V ++ + D+++ G + EM
Sbjct: 190 VLLQST--YATPVDMWSVGCIFAEM 212
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKE---FINEVASISRTSHVNVVALLGF 376
LG+G +G V K K + AVKV+N + K+ + EV + + H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 377 C-------------------------LRVAEELSSTI--GIARGLEYLHLGCSTRILHFD 409
R +E ++ I + G+ Y+H I+H D
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRD 146
Query: 410 IKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP NILL ++D KI DFGL+ C ++ + M GT YIAPEV G
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLS-TCFQQNT--KMKDRIGTAYYIAPEVLR---GTYD 200
Query: 467 YKSDVYNYGMMIFEMTG------GRKNVDV---VDNGSTALDLQASR 504
K DV++ G++++ + G+ D+ V+ G A DL R
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 62/225 (27%)
Query: 307 YADIKKMTNSFKYKLGQGGYGSVYKGKLL-DG--SNVAVKVLND--SKGNGKEFINEVAS 361
+ DIK F+ +G+G +G V K ++ DG + A+K + + SK + ++F E+
Sbjct: 21 WNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 362 ISRTSH-VNVVALLGFC---------------------LR------------VAEELSST 387
+ + H N++ LLG C LR +A +ST
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 388 IG----------IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRK 437
+ +ARG++YL + +H ++ NIL+ E++ KI+DFGL++ +
Sbjct: 136 LSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQ 189
Query: 438 ESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
E + T R V ++A E N + SDV++YG++++E+
Sbjct: 190 EVYVKKTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGL C + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGL---CRHTDD--EMTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 54/210 (25%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 372 ALLGFCLRVAEELSSTI----------------------------------------GIA 391
LLG C + L + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 392 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 451
+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 452 YIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
++APE + + +SDV+++G++++E+
Sbjct: 212 WMAPETIFDRV--YTIQSDVWSFGVLLWEI 239
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 167
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+ N
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIML-NWM 221
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV Y +L VAVK L+ S + + E+ + H NV+ LL
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 375 GF-----------------------------CLRVAEELSSTI--GIARGLEYLHLGCST 403
C +++E + + RGL+Y+H S
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SA 142
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED +I DFGLA+ + + MTG T Y APE+ N
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWYRAPEIML-NWM 196
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ G+
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGK 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 28/143 (19%)
Query: 349 KGNGKEFINEVASISRTSHVNVVALLGFCLRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
K N K+++N S+ H G CL + I IA +E+LH S ++H
Sbjct: 145 KENLKDWMNRRCSLEDREH-------GVCLHIF------IQIAEAVEFLH---SKGLMHR 188
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKE----------SIISMTGARGTVGYIAPEVF 458
D+KP NI D K+ DFGL ++ E + + G GT Y++PE
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQI 248
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
N S+K D+++ G+++FE+
Sbjct: 249 HGN--NYSHKVDIFSLGLILFEL 269
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV Y +L VAVK L+ S + + E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 375 GF-----------------------------CLRVAEELSSTI--GIARGLEYLHLGCST 403
C +++E + + RGL+Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SA 150
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED +I DFGLA+ + + MTG T Y APE+ N
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPEIML-NWM 204
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEELSSTI-----------------------------GIARGLEYLHLGCST 403
R EE + I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI DF LA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKGKLLD------GSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G D + VAVK +N+S + EF+NE + + + +VV
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 372 ALLGFCLR-------------------------------------VAEELSSTIGIARGL 394
LLG + + E + IA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 195
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+APE G + SD++++G++++E+T
Sbjct: 196 MAPESL--KDGVFTTSSDMWSFGVVLWEIT 223
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 46/200 (23%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVVALLG-- 375
+LG G +G VYK + + S +A + D+K + +++ E+ ++ H N+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 376 -----------FC---------LRVAEELS-STIGIA-----RGLEYLHLGCSTRILHFD 409
FC L + L+ S I + L YLH +I+H D
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRD 160
Query: 410 IKPHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPE-VFCRNIGE 464
+K NIL D K++DFG++ + R++ I GT ++APE V C +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAPEVVMCETSKD 214
Query: 465 --VSYKSDVYNYGMMIFEMT 482
YK+DV++ G+ + EM
Sbjct: 215 RPYDYKADVWSLGITLIEMA 234
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKGKLLD------GSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G D + VAVK +N+S + EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 372 ALLGFCLR-------------------------------------VAEELSSTIGIARGL 394
LLG + + E + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 198
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+APE G + SD++++G++++E+T
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKGKLLD------GSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G D + VAVK +N+S + EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 372 ALLGFCLR-------------------------------------VAEELSSTIGIARGL 394
LLG + + E + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 198
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+APE G + SD++++G++++E+T
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 194 TES--KFSVASDVWSFGVVLYEL 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 188 TES--KFSVASDVWSFGVVLYEL 208
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 193 TES--KFSVASDVWSFGVVLYEL 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 195 TES--KFSVASDVWSFGVVLYEL 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 189 TES--KFSVASDVWSFGVVLYEL 209
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 193 TES--KFSVASDVWSFGVVLYEL 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSHVNVV 371
+LG G +GSV +G K +D VA+KVL K + +E + E + + + +V
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQID---VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 372 ALLGFC----LRVAEELS-------------STIGIARGLEYLH---LGC----STRILH 407
L+G C L + E++ I ++ E LH +G +H
Sbjct: 74 RLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEVFCRNIGEVS 466
D+ N+LL KISDFGL+K +S + A + + + APE C N + S
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CINFRKFS 191
Query: 467 YKSDVYNYGMMIFE 480
+SDV++YG+ ++E
Sbjct: 192 SRSDVWSYGVTMWE 205
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 190 TES--KFSVASDVWSFGVVLYEL 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 196 TES--KFSVASDVWSFGVVLYEL 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 193 TES--KFSVASDVWSFGVVLYEL 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 43/199 (21%)
Query: 321 LGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKE----FINE--VASISRTSHVNVVAL 373
+G+GG+G VY + D G A+K L+ + K+ +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 374 LGFCLRVAEELSSTIG----------------------------IARGLEYLHLGCSTRI 405
+ + ++LS + I GLE++H + +
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFV 313
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
++ D+KP NILLDE +ISD GLA ++K+ S+ GT GY+APEV + +
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYD 369
Query: 466 SYKSDVYNYGMMIFEMTGG 484
S +D ++ G M+F++ G
Sbjct: 370 S-SADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 43/199 (21%)
Query: 321 LGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKE----FINE--VASISRTSHVNVVAL 373
+G+GG+G VY + D G A+K L+ + K+ +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 374 LGFCLRVAEELSSTIG----------------------------IARGLEYLHLGCSTRI 405
+ + ++LS + I GLE++H + +
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFV 313
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
++ D+KP NILLDE +ISD GLA ++K+ S+ GT GY+APEV + +
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYD 369
Query: 466 SYKSDVYNYGMMIFEMTGG 484
S +D ++ G M+F++ G
Sbjct: 370 S-SADWFSLGCMLFKLLRG 387
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 50/232 (21%)
Query: 317 FKYKLGQGGYGSV-YKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRT-SHVNVVALL 374
F KLG+GG+ V L DG A+K + + +E A + R +H N++ L+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 375 GFCLR---------------------------------VAEE--LSSTIGIARGLEYLHL 399
+CLR + E+ L +GI RGLE +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH- 151
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFG-LAKICNRKE------SIISMTGARGTVGY 452
+ H D+KP NILL ++ P + D G + + C E ++ R T+ Y
Sbjct: 152 --AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 453 IAPEVF-CRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVV--DNGSTALDLQ 501
APE+F ++ + ++DV++ G +++ M G D+V S AL +Q
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 42/202 (20%)
Query: 317 FKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVNV 370
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 371 VALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHLG 400
V G C L++ E L T I +G+EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVFC 459
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 460 RNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 222 ES--KFSVASDVWSFGVVLYEL 241
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 42/202 (20%)
Query: 317 FKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVNV 370
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 371 VALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHLG 400
V G C L++ E L T I +G+EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVFC 459
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 460 RNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 198 ES--KFSVASDVWSFGVVLYEL 217
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 43/199 (21%)
Query: 321 LGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKE----FINE--VASISRTSHVNVVAL 373
+G+GG+G VY + D G A+K L+ + K+ +NE + S+ T +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 374 LGFCLRVAEELSSTIG----------------------------IARGLEYLHLGCSTRI 405
+ + ++LS + I GLE++H + +
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFV 312
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
++ D+KP NILLDE +ISD GLA ++K+ S+ GT GY+APEV + +
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYD 368
Query: 466 SYKSDVYNYGMMIFEMTGG 484
S +D ++ G M+F++ G
Sbjct: 369 S-SADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 43/199 (21%)
Query: 321 LGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKE----FINE--VASISRTSHVNVVAL 373
+G+GG+G VY + D G A+K L+ + K+ +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 374 LGFCLRVAEELSSTIG----------------------------IARGLEYLHLGCSTRI 405
+ + ++LS + I GLE++H + +
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFV 313
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
++ D+KP NILLDE +ISD GLA ++K+ S+ GT GY+APEV + +
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQKGVAYD 369
Query: 466 SYKSDVYNYGMMIFEMTGG 484
S +D ++ G M+F++ G
Sbjct: 370 S-SADWFSLGCMLFKLLRG 387
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 190 TES--KFSVASDVWSFGVVLYEL 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 208 TES--KFSVASDVWSFGVVLYEL 228
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKGKLLD------GSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G D + VAVK +N+S + EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 372 ALLGFCLR-------------------------------------VAEELSSTIGIARGL 394
LLG + + E + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYRKGGKGLLPVRW 198
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+APE G + SD++++G++++E+T
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV Y +L VAVK L+ S + + E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 375 G-FCLRVAEE-------LSSTIG-----------------------IARGLEYLHLGCST 403
F + E +++ +G + RGL+Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SA 150
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED +I DFGLA+ + + MTG T Y APE+ N
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPEIML-NWM 204
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 208 TES--KFSVASDVWSFGVVLYEL 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 46/196 (23%)
Query: 320 KLGQGGYGSVY--KGKLLDGSNVAVKVLNDSK----GNGKEFINEVASISRTSHVNVVAL 373
KLG G YG V K KL G+ A+K++ S N ++EVA + + H N++ L
Sbjct: 11 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 374 LGF------------CLRVAEELSSTI---------------GIARGLEYLHLGCSTRIL 406
F R E I + G YLH I+
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIV 126
Query: 407 HFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
H D+KP N+LL+ D KI DFGL+ E M GT YIAPEV +
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAYYIAPEVLRKKYD 183
Query: 464 EVSYKSDVYNYGMMIF 479
E K DV++ G++++
Sbjct: 184 E---KCDVWSCGVILY 196
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 53/224 (23%)
Query: 320 KLGQGGYGSVYKGK-LLDGSNVAVKVLNDSK----GNGKEFINEVASISRTSHVNVVALL 374
KLG G YG V K L G+ A+K++ S N ++EVA + + H N++ L
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 375 GF------------CLRVAEELSSTI---------------GIARGLEYLHLGCSTRILH 407
F R E I + G YLH I+H
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVH 144
Query: 408 FDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
D+KP N+LL+ D KI DFGL+ E M GT YIAPEV + E
Sbjct: 145 RDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTAYYIAPEVLRKKYDE 201
Query: 465 VSYKSDVYNYGMMIFEMT------GGRKNVDV---VDNGSTALD 499
K DV++ G++++ + GG+ + ++ V+ G + D
Sbjct: 202 ---KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 47/199 (23%)
Query: 320 KLGQGGYGSV-YKGKLLDGSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVALLGFC 377
K+G+G G V + G VAVK ++ K +E + NEV + H NVV +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 378 L------------------------RVAEELSSTI--GIARGLEYLHLGCSTRILHFDIK 411
L R+ EE +T+ + R L YLH + ++H DIK
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIK 168
Query: 412 PHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
+ILL D K+SDFG ++K +++ ++ GT ++APEV R + Y
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVISR----LPY 218
Query: 468 --KSDVYNYGMMIFEMTGG 484
+ D+++ G+M+ EM G
Sbjct: 219 GTEVDIWSLGIMVIEMIDG 237
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI FGLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 40/207 (19%)
Query: 316 SFKYKLGQ----GGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFI----NEVASISRTS 366
S +Y+LG+ GG V+ + L D +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 367 HVNVVALL---------------------GFCLRVAEELSSTIGIARGLEYLHLGCSTR- 404
H +VA+ G LR + R +E + C
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 405 ------ILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARGTVGYIAPEV 457
I+H D+KP NIL+ K+ DFG+A+ I + S+ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ V +SDVY+ G +++E+ G
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI D GLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H D+ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 190 TES--KFSVASDVWSFGVVLYEL 210
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGLA++ + E+ + G + + + +PE +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 227
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 228 TSASDVWSYGIVLWEV 243
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 56/258 (21%)
Query: 275 KRKLSSYNSTASCLNIETFLRNYR---SLSPKRYGYADIKKMTN---SFKYKLGQGGYGS 328
+ +L S S L T + +Y S + K +D+K++ + LG G +G
Sbjct: 13 QMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGE 72
Query: 329 VYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALLGFCLR- 379
VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V +G L+
Sbjct: 73 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 132
Query: 380 ----------VAEELSSTIGIARG----------LEYLHL------GCS----TRILHFD 409
+L S + R L+ LH+ GC +H D
Sbjct: 133 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRD 192
Query: 410 IKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I N LL CP KI DFG+A+ R A V ++ PE F I
Sbjct: 193 IAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI- 248
Query: 464 EVSYKSDVYNYGMMIFEM 481
+ K+D +++G++++E+
Sbjct: 249 -FTSKTDTWSFGVLLWEI 265
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 372 ALLGFC--------------------------------LRVAEE------------LSST 387
LLG C +VA E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 212 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 243
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 64/226 (28%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFIN-E 358
P+ Y D K +G G +G VY+ KL D G VA+K VL D K F N E
Sbjct: 51 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRE 97
Query: 359 VASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA- 391
+ + + H N+V L F RVA S T+ +
Sbjct: 98 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 392 ---------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESII 441
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +
Sbjct: 158 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
S +R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 215 SXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 45/203 (22%)
Query: 322 GQGGYGSVYKGKLLDGSNVAVKV--LNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
+G +G V+K +LL+ VAVK+ + D + E+ EV S+ H N++ +G R
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 380 -------------------VAEELSSTI-----------GIARGLEYLHL-------GCS 402
+++ L + + +ARGL YLH G
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 403 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 462
I H DIK N+LL + I+DFGLA +S G GT Y+APEV I
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI 209
Query: 463 G---EVSYKSDVYNYGMMIFEMT 482
+ + D+Y G++++E+
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWELA 232
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 42/204 (20%)
Query: 321 LGQGGYGSVYKGKL-LDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVAL--- 373
+G G YG V + L G VA+K + D N K + E+ + H N++A+
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 374 ------------LGFCLRVAE-ELSSTI----------------GIARGLEYLHLGCSTR 404
+ L + E +L I + RGL+Y+H S +
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQ 178
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAK-ICNR-KESIISMTGARGTVGYIAPEVFCRNI 462
++H D+KP N+L++E+ KI DFG+A+ +C E MT T Y APE+ ++
Sbjct: 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML-SL 237
Query: 463 GEVSYKSDVYNYGMMIFEMTGGRK 486
E + D+++ G + EM R+
Sbjct: 238 HEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI D GLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 60/216 (27%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKV--LNDSKGNGKEFINEVASISRTSHVNVVALLGFC 377
LG+GG+G V++ K +D N A+K L + + ++ + EV ++++ H +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 378 LR--VAEELSST----------------------------------------IGIARGLE 395
L E+L + + IA +E
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 396 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE----------SIISMTG 445
+LH S ++H D+KP NI D K+ DFGL ++ E + TG
Sbjct: 133 FLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
GT Y++PE N S+K D+++ G+++FE+
Sbjct: 190 QVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFEL 223
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 64/226 (28%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFIN-E 358
P+ Y D K +G G +G VY+ KL D G VA+K VL D K F N E
Sbjct: 51 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRE 97
Query: 359 VASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA- 391
+ + + H N+V L F RVA S T+ +
Sbjct: 98 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 392 ---------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESII 441
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +
Sbjct: 158 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
S +R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 215 SYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 42/204 (20%)
Query: 321 LGQGGYGSVYKGKL-LDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVAL--- 373
+G G YG V + L G VA+K + D N K + E+ + H N++A+
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 374 ------------LGFCLRVAE-ELSSTI----------------GIARGLEYLHLGCSTR 404
+ L + E +L I + RGL+Y+H S +
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQ 179
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRK-ESIISMTGARGTVGYIAPEVFCRNI 462
++H D+KP N+L++E+ KI DFG+A+ +C E MT T Y APE+ ++
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML-SL 238
Query: 463 GEVSYKSDVYNYGMMIFEMTGGRK 486
E + D+++ G + EM R+
Sbjct: 239 HEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 25 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 72
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 73 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 132
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 133 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 190 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 40/207 (19%)
Query: 316 SFKYKLGQ----GGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFI----NEVASISRTS 366
S +Y+LG+ GG V+ + L D +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 367 HVNVVALL---------------------GFCLRVAEELSSTIGIARGLEYLHLGCSTR- 404
H +VA+ G LR + R +E + C
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 405 ------ILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARGTVGYIAPEV 457
I+H D+KP NI++ K+ DFG+A+ I + S+ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ V +SDVY+ G +++E+ G
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 64/226 (28%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFIN-E 358
P+ Y D K +G G +G VY+ KL D G VA+K VL D K F N E
Sbjct: 45 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRE 91
Query: 359 VASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA- 391
+ + + H N+V L F RVA S T+ +
Sbjct: 92 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 151
Query: 392 ---------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESII 441
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +
Sbjct: 152 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 208
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
S +R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 209 SYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 46/200 (23%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVAL--- 373
K+G+G YG VYK + G A+K + + +G I E++ + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 374 ---------------------LGFC---LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
L C L S + + G+ Y H R+LH D
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 410 IKPHNILLDEDFCPKISDFGLAK---ICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP N+L++ + KI+DFGLA+ I RK T T+ Y AP+V +G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK-----YTHEVVTLWYRAPDVL---MGSKK 177
Query: 467 YKS--DVYNYGMMIFEMTGG 484
Y + D+++ G + EM G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 17 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 372 ALLGFC--------------------------------LRVAEE------------LSST 387
LLG C +VA E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 203 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 234
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 40/207 (19%)
Query: 316 SFKYKLGQ----GGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFI----NEVASISRTS 366
S +Y+LG+ GG V+ + L D +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 367 HVNVVALL---------------------GFCLRVAEELSSTIGIARGLEYLHLGCSTR- 404
H +VA+ G LR + R +E + C
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 405 ------ILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARGTVGYIAPEV 457
I+H D+KP NI++ K+ DFG+A+ I + S+ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ V +SDVY+ G +++E+ G
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 46/200 (23%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVAL--- 373
K+G+G YG VYK + G A+K + + +G I E++ + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 374 ---------------------LGFC---LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
L C L S + + G+ Y H R+LH D
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 410 IKPHNILLDEDFCPKISDFGLAK---ICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP N+L++ + KI+DFGLA+ I RK T T+ Y AP+V +G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK-----YTHEVVTLWYRAPDVL---MGSKK 177
Query: 467 YKS--DVYNYGMMIFEMTGG 484
Y + D+++ G + EM G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 36 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 83
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 84 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 143
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 144 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 201 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 64/226 (28%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFIN-E 358
P+ Y D K +G G +G VY+ KL D G VA+K VL D K F N E
Sbjct: 53 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRE 99
Query: 359 VASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA- 391
+ + + H N+V L F RVA S T+ +
Sbjct: 100 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 159
Query: 392 ---------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESII 441
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +
Sbjct: 160 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 216
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
S +R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 217 SYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 372 ALLGFC--------------------------------LRVAEE------------LSST 387
LLG C +VA E + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 203 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 18 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 65
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 66 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 125
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 126 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 183 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 17 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 42/196 (21%)
Query: 320 KLGQGGYG-SVYKGKLLDGSNVAVKVLNDSKGNGKEFIN---EVASISRTSHVNVV---- 371
K+G+G +G ++ DG +K +N S+ + KE EVA ++ H N+V
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 372 -------------------------ALLGFCLRVAEELSSTIGIARGLEYLHLGCSTRIL 406
A G + + L + I L+++H +IL
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKIL 147
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEVFCRNIGEV 465
H DIK NI L +D ++ DFG+A++ N S + + A GT Y++PE+ C N
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLN---STVELARACIGTPYYLSPEI-CEN-KPY 202
Query: 466 SYKSDVYNYGMMIFEM 481
+ KSD++ G +++E+
Sbjct: 203 NNKSDIWALGCVLYEL 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 29 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 76
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 136
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 137 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 194 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 57/213 (26%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 372 ALLGFCLRVAEELSSTI------------------------------------------- 388
LLG C + L +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 389 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG 448
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 213 PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 243
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 46/200 (23%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVAL--- 373
K+G+G YG VYK + G A+K + + +G I E++ + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 374 ---------------------LGFC---LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
L C L S + + G+ Y H R+LH D
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 410 IKPHNILLDEDFCPKISDFGLAK---ICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP N+L++ + KI+DFGLA+ I RK T T+ Y AP+V +G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK-----YTHEIVTLWYRAPDVL---MGSKK 177
Query: 467 YKS--DVYNYGMMIFEMTGG 484
Y + D+++ G + EM G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKRREFHAE-P 188
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 17 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 64/226 (28%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFIN-E 358
P+ Y D K +G G +G VY+ KL D G VA+K VL D K F N E
Sbjct: 55 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRE 101
Query: 359 VASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA- 391
+ + + H N+V L F RVA S T+ +
Sbjct: 102 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 161
Query: 392 ---------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESII 441
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +
Sbjct: 162 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 218
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
S +R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 219 SYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 29 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 76
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 77 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 136
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 137 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 194 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 30 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 77
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 78 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 137
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 138 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 195 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKGKLLD------GSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G D + VAVK +N+S + EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 372 ALLGFCLR-------------------------------------VAEELSSTIGIARGL 394
LLG + + E + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 198
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+APE G + SD++++G++++E+T
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 372 ALLGFC--------------------------------LRVAEE------------LSST 387
LLG C +VA E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 203 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 17 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 64
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 182 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 64/226 (28%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFIN-E 358
P+ Y D K +G G +G VY+ KL D G VA+K VL D K F N E
Sbjct: 96 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRE 142
Query: 359 VASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA- 391
+ + + H N+V L F RVA S T+ +
Sbjct: 143 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 202
Query: 392 ---------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESII 441
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +
Sbjct: 203 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 259
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
S +R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 260 SYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 372 ALLGFC--------------------------------LRVAEE------------LSST 387
LLG C +VA E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 212 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 243
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 372 ALLGFC--------------------------------LRVAEE------------LSST 387
LLG C +VA E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 212 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 243
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 94/226 (41%), Gaps = 64/226 (28%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFIN-E 358
P+ Y D K +G G +G VY+ KL D G VA+K VL D K F N E
Sbjct: 22 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRE 68
Query: 359 VASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA- 391
+ + + H N+V L F RVA S T+ +
Sbjct: 69 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 128
Query: 392 ---------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESII 441
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +
Sbjct: 129 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 185
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
S +R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 186 SYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 42/198 (21%)
Query: 321 LGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G L L G VA+K L ++ ++F++E + + + H NV+ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYV 157
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG---TVGYIAPEVFCRNIG 463
H D+ NIL++ + K+SDFGL++ S + T A G + + APE
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--QYR 215
Query: 464 EVSYKSDVYNYGMMIFEM 481
+ + SDV++YG++++E+
Sbjct: 216 KFTSASDVWSYGIVMWEV 233
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 372 ALLGFC--------------------------------LRVAEE------------LSST 387
LLG C +VA E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 203 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 50/219 (22%)
Query: 321 LGQGGYGSVYKGKLLD---GSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV +D G VA+K L+ S+ K E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCSA--IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 375 GF-----CLR-----------VAEELSSTIGIA--------------RGLEYLHLGCSTR 404
LR + +L +G+ +GL+Y+H S
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAG 146
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
++H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APEV +
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWM-H 200
Query: 465 VSYKSDVYNYGMMIFEMTGGR---KNVDVVDNGSTALDL 500
+ D+++ G ++ EM G+ K D +D + L +
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEV 359
P+ Y D K +G G +G VY+ KL D G VA+K VL D + +E +
Sbjct: 21 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----L 68
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 69 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 128
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 129 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 186 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV + K G VAVK L+ S + K E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 375 GFCL--RVAEE------LSSTIG-----------------------IARGLEYLHLGCST 403
R EE ++ +G I RGL+Y+H S
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SA 144
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I+H D+KP N+ ++ED KI D GLA+ + + MTG T Y APE+ N
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRWYRAPEIML-NWM 198
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ E+ GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 42/198 (21%)
Query: 321 LGQGGYGSVYKGKLL----DGSNVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V +G+L S VA+K L ++ +EF++E + + + H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 375 GFC---------------------LRVAEELSSTI-------GIARGLEYLHLGCSTRIL 406
G LR+ + + I GIA G+ YL +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYV 138
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMT---GARGTVGYIAPEVFCRNIG 463
H D+ NIL++ + K+SDFGL++ S + T G + + + APE
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA--FR 196
Query: 464 EVSYKSDVYNYGMMIFEM 481
+ + SD ++YG++++E+
Sbjct: 197 KFTSASDAWSYGIVMWEV 214
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFV 169
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 227
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 228 TSASDVWSYGIVLWEV 243
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G F L +A + ++ L YL S R +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVH 134
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESI--NFRRFTS 191
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFIN-EV 359
P+ Y D K +G G +G VY+ KL D G VA+K + GK F N E+
Sbjct: 17 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNREL 64
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYV 124
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 182 XICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFIN-EV 359
P+ Y D K +G G +G VY+ KL D G VA+K + GK F N E+
Sbjct: 17 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNREL 64
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 182 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKGKLLD------GSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G D + VAVK +N+S + EF+NE + + + +VV
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 372 ALLGFCLR-------------------------------------VAEELSSTIGIARGL 394
LLG + + E + IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 197
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+APE G + SD++++G++++E+T
Sbjct: 198 MAPESL--KDGVFTTSSDMWSFGVVLWEIT 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 93/225 (41%), Gaps = 62/225 (27%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFIN-EV 359
P+ Y D K +G G +G VY+ KL D G VA+K + GK F N E+
Sbjct: 17 PQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNREL 64
Query: 360 ASISRTSHVNVVALLGF-----------------------CLRVAEELS---STIGIA-- 391
+ + H N+V L F RVA S T+ +
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 392 --------RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIIS 442
R L Y+H S I H DIKP N+LLD D K+ DFG AK R E +S
Sbjct: 125 KLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGR 485
+R Y APE+ G Y S DV++ G ++ E+ G+
Sbjct: 182 YICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 42/198 (21%)
Query: 321 LGQGGYGSVYKGKLL----DGSNVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V +G+L S VA+K L ++ +EF++E + + + H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 375 GFC---------------------LRVAEELSSTI-------GIARGLEYLHLGCSTRIL 406
G LR+ + + I GIA G+ YL +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYV 140
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMT---GARGTVGYIAPEVFCRNIG 463
H D+ NIL++ + K+SDFGL++ S + T G + + + APE
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA--FR 198
Query: 464 EVSYKSDVYNYGMMIFEM 481
+ + SD ++YG++++E+
Sbjct: 199 KFTSASDAWSYGIVMWEV 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 42/197 (21%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYL-HLGCSTRI 405
G + V + + GIA G++YL +G
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGA---- 168
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGE 464
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--K 226
Query: 465 VSYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 227 FTSASDVWSYGIVLWEV 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 372 ALLGFC--------------------------------LRVAEE------------LSST 387
LLG C +VA E + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 249 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 280
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSHVNVV 371
+LG G +GSV +G K +D VA+KVL K + +E + E + + + +V
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQID---VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 372 ALLGFC----LRVAEELS-------------STIGIARGLEYLH---LGC----STRILH 407
L+G C L + E++ I ++ E LH +G +H
Sbjct: 400 RLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEVFCRNIGEVS 466
++ N+LL KISDFGL+K +S + A + + + APE C N + S
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CINFRKFS 517
Query: 467 YKSDVYNYGMMIFE 480
+SDV++YG+ ++E
Sbjct: 518 SRSDVWSYGVTMWE 531
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
LEYLH S I++ D+KP NILLD++ KI+DFG AK + GT Y
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDY 169
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
IAPEV S D +++G++I+EM G
Sbjct: 170 IAPEVVSTKPYNKS--IDWWSFGILIYEMLAG 199
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 85/211 (40%), Gaps = 53/211 (25%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINE--VASISRTSHVNVVALLG--- 375
+G+G YG+VYKG L D VAVKV S N + FINE + + H N+ +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 376 -------------------------FCLRVAEELSS---TIGIARGLEYLHLGC------ 401
L ++ +SS + RGL YLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLA------KICNRKESIISMTGARGTVGYIAP 455
I H D+ N+L+ D ISDFGL+ ++ E + GT+ Y+AP
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197
Query: 456 EVF-----CRNIGEVSYKSDVYNYGMMIFEM 481
EV R+ + D+Y G++ +E+
Sbjct: 198 EVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 93/210 (44%), Gaps = 52/210 (24%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSN-VAVKVLNDSKGNGKE--FINE 358
P+ DI+ + + F+ LG G + V + VA+K + GKE NE
Sbjct: 8 PRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 359 VASISRTSHVNVVAL-----------LGFCLRVAEELSSTI----------------GIA 391
+A + + H N+VAL L L EL I +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 392 RGLEYLH-LGCSTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICNRKESIISMTGAR 447
++YLH LG I+H D+KP N+L LDED ISDFGL+K+ + S++S A
Sbjct: 127 DAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLST--AC 179
Query: 448 GTVGYIAPEVF----------CRNIGEVSY 467
GT GY+APEV C +IG ++Y
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 50/219 (22%)
Query: 321 LGQGGYGSVYKGKLLD---GSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YGSV +D G VA+K L+ S+ K E+ + H NV+ LL
Sbjct: 50 VGSGAYGSVCSA--IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 375 GF-----CLR-----------VAEELSSTIGIA--------------RGLEYLHLGCSTR 404
LR + +L +G+ +GL+Y+H S
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAG 164
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
++H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APEV +
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWM-H 218
Query: 465 VSYKSDVYNYGMMIFEMTGGR---KNVDVVDNGSTALDL 500
+ D+++ G ++ EM G+ K D +D + L +
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 167
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 168 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 225
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 226 TSASDVWSYGIVLWEV 241
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 52/221 (23%)
Query: 321 LGQGGYGSVYKGKLL--DGS--NVAVKVLND---SKGNGKEFINEVASISRTSHVNVVAL 373
LG+G +GSV + +L DGS VAVK+L + + +EF+ E A + H +V L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 374 LGFCLRVAEE----------------------LSSTIG-----------------IARGL 394
+G LR + L+S IG IA G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
EYL S +H D+ N +L ED ++DFGL++ + ++ V ++A
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFE-MTGGRKNVDVVDNG 494
E N+ V SDV+ +G+ ++E MT G+ ++N
Sbjct: 208 LESLADNLYTV--HSDVWAFGVTMWEIMTRGQTPYAGIENA 246
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 66/243 (27%)
Query: 297 YRSLSPKRYGYADI----------KKMTNSFKYKLGQGGYGSVYKG------KLLDGSNV 340
Y S++P+ + AD+ +K+T S +LGQG +G VY+G K + V
Sbjct: 23 YASVNPEYFSAADVYVPDEWEVAREKITMS--RELGQGSFGMVYEGVAKGVVKDEPETRV 80
Query: 341 AVKVLNDSKGNGK--EFINEVASISRTSHVNVVALLGFC--------------------- 377
A+K +N++ + EF+NE + + + +VV LLG
Sbjct: 81 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 140
Query: 378 ---LRVAEE---------LSSTIG----IARGLEYLHLGCSTRILHFDIKPHNILLDEDF 421
LR E LS I IA G+ YL+ + + +H D+ N ++ EDF
Sbjct: 141 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF 197
Query: 422 CPKISDFGLAKICNRKESIISMTGARG--TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIF 479
KI DFG+ + + E+ G +G V +++PE G + SDV+++G++++
Sbjct: 198 TVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLW 253
Query: 480 EMT 482
E+
Sbjct: 254 EIA 256
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 93/210 (44%), Gaps = 52/210 (24%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSN-VAVKVLNDSKGNGKE--FINE 358
P+ DI+ + + F+ LG G + V + VA+K + GKE NE
Sbjct: 8 PRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 359 VASISRTSHVNVVAL-----------LGFCLRVAEELSSTI----------------GIA 391
+A + + H N+VAL L L EL I +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 392 RGLEYLH-LGCSTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICNRKESIISMTGAR 447
++YLH LG I+H D+KP N+L LDED ISDFGL+K+ + S++S A
Sbjct: 127 DAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLST--AC 179
Query: 448 GTVGYIAPEVF----------CRNIGEVSY 467
GT GY+APEV C +IG ++Y
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 227
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 228 TSASDVWSYGIVLWEV 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 227
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 228 TSASDVWSYGIVLWEV 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 227
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 228 TSASDVWSYGIVLWEV 243
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G F L +A + ++ L YL S R +H
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVH 514
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 571
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 227
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 228 TSASDVWSYGIVLWEV 243
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 227
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 228 TSASDVWSYGIVLWEV 243
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 64/221 (28%)
Query: 321 LGQGGYGSVYKGKL--LDG----SNVAVKVL--NDSKGNGKEFINEVASISRTSHVNVVA 372
LG+G +G V K L G + VAVK+L N S ++ ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 373 LLGFC-------------------------------------------LRVAEELSSTIG 389
L G C L +E + T+G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 390 --------IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
I++G++YL +++H D+ NIL+ E KISDFGL++ ++S +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ R V ++A E +I + +SDV+++G++++E+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIV 246
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 56/247 (22%)
Query: 286 SCLNIETFLRNYR---SLSPKRYGYADIKKMTN---SFKYKLGQGGYGSVYKGKLLDGSN 339
S L T + +Y S + K +D+K++ + LG G +G VY+G++ N
Sbjct: 4 SKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPN 63
Query: 340 ------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALLGFCLR-----------V 380
VAVK L + S+ + +F+ E IS+ +H N+V +G L+
Sbjct: 64 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 123
Query: 381 AEELSSTIGIARG----------LEYLHL------GCS----TRILHFDIKPHNILLDED 420
+L S + R L+ LH+ GC +H DI N LL
Sbjct: 124 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT-- 181
Query: 421 FCP------KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNY 474
CP KI DFG+A+ R A V ++ PE F I + K+D +++
Sbjct: 182 -CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI--FTSKTDTWSF 238
Query: 475 GMMIFEM 481
G++++E+
Sbjct: 239 GVLLWEI 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 157
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 158 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 215
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 216 TSASDVWSYGIVLWEV 231
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 40/197 (20%)
Query: 321 LGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L L G VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GI+ G++YL +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYV 146
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + APE +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--FRKF 204
Query: 466 SYKSDVYNYGMMIFEMT 482
+ SDV++YG++++E+
Sbjct: 205 TSASDVWSYGIVMWEVV 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 17/99 (17%)
Query: 392 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---- 447
+G++YLH + R++H D+K N+ L++D KI DFGLA + I G R
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKTL 202
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT YIAPEV C+ G S++ D+++ G +++ + G+
Sbjct: 203 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTLLVGK 239
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 93/210 (44%), Gaps = 52/210 (24%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSN-VAVKVLNDSKGNGKE--FINE 358
P+ DI+ + + F+ LG G + V + VA+K + GKE NE
Sbjct: 8 PRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 359 VASISRTSHVNVVAL-----------LGFCLRVAEELSSTI----------------GIA 391
+A + + H N+VAL L L EL I +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 392 RGLEYLH-LGCSTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICNRKESIISMTGAR 447
++YLH LG I+H D+KP N+L LDED ISDFGL+K+ + S++S A
Sbjct: 127 DAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLST--AC 179
Query: 448 GTVGYIAPEVF----------CRNIGEVSY 467
GT GY+APEV C +IG ++Y
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 93/210 (44%), Gaps = 52/210 (24%)
Query: 302 PKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSN-VAVKVLNDSKGNGKE--FINE 358
P+ DI+ + + F+ LG G + V + VA+K + GKE NE
Sbjct: 8 PRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 359 VASISRTSHVNVVAL-----------LGFCLRVAEELSSTI----------------GIA 391
+A + + H N+VAL L L EL I +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL 126
Query: 392 RGLEYLH-LGCSTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICNRKESIISMTGAR 447
++YLH LG I+H D+KP N+L LDED ISDFGL+K+ + S++S A
Sbjct: 127 DAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLST--AC 179
Query: 448 GTVGYIAPEVF----------CRNIGEVSY 467
GT GY+APEV C +IG ++Y
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 46/200 (23%)
Query: 321 LGQGGYGSVY--KGKLLDGSNVAVKVLND----SKGNGKEFINEVASISRTSHVNVVALL 374
LG+G +G V K K+ G AVKV++ K + + + EV + + H N++ L
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 375 ------GFCLRVAEELS--------------STIGIAR-------GLEYLHLGCSTRILH 407
G+ V E + S + AR G+ Y+H +I+H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 149
Query: 408 FDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
D+KP N+LL+ +D +I DFGL+ E+ M GT YIAPEV G
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEVLH---GT 203
Query: 465 VSYKSDVYNYGMMIFEMTGG 484
K DV++ G++++ + G
Sbjct: 204 YDEKCDVWSTGVILYILLSG 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 17/99 (17%)
Query: 392 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---- 447
+G++YLH + R++H D+K N+ L++D KI DFGLA + I G R
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDL 202
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT YIAPEV C+ G S++ D+++ G +++ + G+
Sbjct: 203 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTLLVGK 239
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 56/258 (21%)
Query: 275 KRKLSSYNSTASCLNIETFLRNYRS---LSPKRYGYADIKKMTN---SFKYKLGQGGYGS 328
+ +L S S L T + +Y + K +D+K++ + LG G +G
Sbjct: 3 QMELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGE 62
Query: 329 VYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALLGFCLR- 379
VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V +G L+
Sbjct: 63 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 122
Query: 380 ----------VAEELSSTIGIARG----------LEYLHL------GCS----TRILHFD 409
+L S + R L+ LH+ GC +H D
Sbjct: 123 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRD 182
Query: 410 IKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG 463
I N LL CP KI DFG+A+ R A V ++ PE F I
Sbjct: 183 IAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI- 238
Query: 464 EVSYKSDVYNYGMMIFEM 481
+ K+D +++G++++E+
Sbjct: 239 -FTSKTDTWSFGVLLWEI 255
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 17/99 (17%)
Query: 392 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---- 447
+G++YLH + R++H D+K N+ L++D KI DFGLA + I G R
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKXL 202
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT YIAPEV C+ G S++ D+++ G +++ + G+
Sbjct: 203 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTLLVGK 239
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 58/214 (27%)
Query: 321 LGQGGYGSVYKG------KLLDGSNVAVKVLND--SKGNGKEFINEVASISRTSH-VNVV 371
LG+G +G V + K VAVK+L + + + ++E+ + H +NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 372 ALLGFC--------------------------------------------LRVAEELSST 387
LLG C L + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 388 IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 447
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 214 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 140
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 198
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 199 TSASDVWSYGIVLWEV 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 64/221 (28%)
Query: 321 LGQGGYGSVYKGKL--LDG----SNVAVKVL--NDSKGNGKEFINEVASISRTSHVNVVA 372
LG+G +G V K L G + VAVK+L N S ++ ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 373 LLGFC-------------------------------------------LRVAEELSSTIG 389
L G C L +E + T+G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 390 --------IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
I++G++YL +++H D+ NIL+ E KISDFGL++ ++S +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ R V ++A E +I + +SDV+++G++++E+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIV 246
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 140
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE +
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 198
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 199 TSASDVWSYGIVLWEV 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L S +VA+K L ++ ++F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYV 169
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFGL ++ + E+ + G + + + +PE +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KF 227
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 228 TSASDVWSYGIVLWEV 243
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 129
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 130 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 186
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 187 VDVWSCGIVLTAMLAG 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 188
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G F L +A + ++ L YL S R +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVH 134
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ C K+ DFGL++ + + + + ++APE N +
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 191
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 38/201 (18%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 188
Query: 469 SDVYNYGMMIFEMTGGRKNVD 489
DV++ G+++ M G D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 159 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 216 EAFMEGI--FTSKTDTWSFGVLLWEI 239
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 46/200 (23%)
Query: 321 LGQGGYGSVY--KGKLLDGSNVAVKVLND----SKGNGKEFINEVASISRTSHVNVVALL 374
LG+G +G V K K+ G AVKV++ K + + + EV + + H N++ L
Sbjct: 40 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 375 ------GFCLRVAEELS--------------STIGIAR-------GLEYLHLGCSTRILH 407
G+ V E + S + AR G+ Y+H +I+H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 155
Query: 408 FDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
D+KP N+LL+ +D +I DFGL+ E+ M GT YIAPEV G
Sbjct: 156 RDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEVLH---GT 209
Query: 465 VSYKSDVYNYGMMIFEMTGG 484
K DV++ G++++ + G
Sbjct: 210 YDEKCDVWSTGVILYILLSG 229
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 38/201 (18%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGGRKNVD 489
DV++ G+++ M G D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 17/99 (17%)
Query: 392 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---- 447
+G++YLH + R++H D+K N+ L++D KI DFGLA + I G R
Sbjct: 137 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDL 186
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT YIAPEV C+ G S++ D+++ G +++ + G+
Sbjct: 187 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTLLVGK 223
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 380 VAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKES 439
+ EE+ I +A HL + +I+H DIKP NILLD K+ DFG I +
Sbjct: 122 IPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFG---ISGQLVD 178
Query: 440 IISMTGARGTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGGR 485
I+ T G Y+APE + Y +SDV++ G+ ++E+ GR
Sbjct: 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 39/200 (19%)
Query: 320 KLGQGGYGSVYKG-KLLDGSNVAVK--VLNDSKGNGKEFINEVASISRTSHVNVVALLGF 376
KLG G Y +VYKG G VA+K L+ +G I E++ + H N+V L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 377 C-----LRVAEEL----------SSTIG-IARGLEY-------------LHLGCSTRILH 407
L + E S T+G RGLE L +ILH
Sbjct: 72 IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILH 131
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+KP N+L+++ K+ DFGLA+ + + + T+ Y AP+V +G +Y
Sbjct: 132 RDLKPQNLLINKRGQLKLGDFGLARAFGI--PVNTFSSEVVTLWYRAPDVL---MGSRTY 186
Query: 468 KS--DVYNYGMMIFEMTGGR 485
+ D+++ G ++ EM G+
Sbjct: 187 STSIDIWSCGCILAEMITGK 206
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 173 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 230 EAFMEGI--FTSKTDTWSFGVLLWEI 253
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 40/199 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINE-VASISRTSHVNVVALLG--- 375
LG+G YG VY G+ L +A+K + + + ++E +A H N+V LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 376 ---FCLRVAEEL-------------------SSTIG-----IARGLEYLHLGCSTRILHF 408
F E++ TIG I GL+YLH +I+H
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHR 146
Query: 409 DIKPHNILLDE-DFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEVFCRNIGEVS 466
DIK N+L++ KISDFG +K R I T GT+ Y+APE+ +
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 467 YKSDVYNYGMMIFEMTGGR 485
+D+++ G I EM G+
Sbjct: 204 KAADIWSLGCTIIEMATGK 222
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGARG 448
I +G+EYL S R +H D+ NIL++ + KI+DFGLAK+ K+ + +
Sbjct: 120 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ + APE NI S +SDV+++G++++E+
Sbjct: 177 PIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 316 SFKYKLGQGGYGSVYKGK---LLD--GSNVAVKVLNDS-KGNGKEFINEVASISRTSHVN 369
F +LG+G +GSV + L D G VAVK L S + + ++F E+ + H N
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 370 VVALLGFC-------LRVAEE-----------------------LSSTIGIARGLEYLHL 399
+V G C L++ E L T I +G+EYL
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 131
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYIAPEVF 458
+ R +H ++ NIL++ + KI DFGL K+ + KE + + APE
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 459 CRNIGEVSYKSDVYNYGMMIFEM 481
+ + S SDV+++G++++E+
Sbjct: 191 TES--KFSVASDVWSFGVVLYEL 211
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 264 LKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 293
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 266 LKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 295
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 188
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 188
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 159 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 216 EAFMEGI--FTSKTDTWSFGVLLWEI 239
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 188
Query: 469 SDVYNYGMMIFEMTGG 484
DV++ G+++ M G
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 38/201 (18%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 187
Query: 469 SDVYNYGMMIFEMTGGRKNVD 489
DV++ G+++ M G D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 259 LKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 288
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 38/201 (18%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKG-NGKEFINEVASISRT-SHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E I + I++ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 188
Query: 469 SDVYNYGMMIFEMTGGRKNVD 489
DV++ G+++ M G D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 158 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 215 EAFMEGI--FTSKTDTWSFGVLLWEI 238
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 38/201 (18%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKGNG--KEFINEVASISRTSHVNVVALLG-- 375
LG+G YG V + VAVK+++ + + E+ + +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 376 -----------FCL--RVAEELSSTIGIAR------------GLEYLHLGCSTRILHFDI 410
+C + + + IG+ G+ YLH I H DI
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 411 KPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAE-P 188
Query: 469 SDVYNYGMMIFEMTGGRKNVD 489
DV++ G+++ M G D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 46/200 (23%)
Query: 321 LGQGGYGSVY--KGKLLDGSNVAVKVLND----SKGNGKEFINEVASISRTSHVNVVALL 374
LG+G +G V K K+ G AVKV++ K + + + EV + + H N++ L
Sbjct: 57 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 375 ------GFCLRVAEELS--------------STIGIAR-------GLEYLHLGCSTRILH 407
G+ V E + S + AR G+ Y+H +I+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 172
Query: 408 FDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
D+KP N+LL+ +D +I DFGL+ E+ M GT YIAPEV G
Sbjct: 173 RDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEVLH---GT 226
Query: 465 VSYKSDVYNYGMMIFEMTGG 484
K DV++ G++++ + G
Sbjct: 227 YDEKCDVWSTGVILYILLSG 246
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++APE + + +SDV+++G++++E+
Sbjct: 257 LKWMAPETIFDRV--YTIQSDVWSFGVLLWEI 286
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 158 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 215 EAFMEGI--FTSKTDTWSFGVLLWEI 238
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 320 KLGQGGYGSVYKGKLLDGS----NVAVKVLNDSKGNGKE----FINEVASISRTSHVNVV 371
KLG G +G V +G+ S +VAVK L + E FI EV ++ H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 372 ALLGFCL----RVAEELSS-----------------------TIGIARGLEYLHLGCSTR 404
L G L ++ EL+ + +A G+ YL S R
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 135
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNIG 463
+H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTR 193
Query: 464 EVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTAL 498
S+ SD + +G+ ++EM + + NGS L
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G F L +A + ++ L YL S R +H
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVH 514
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ C K+ DFGL++ + + + + ++APE N +
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 571
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 159 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 216 EAFMEGI--FTSKTDTWSFGVLLWEI 239
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G + L +A + ++ L YL S R +H
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVH 131
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 188
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 189 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G + L +A + ++ L YL S R +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVH 134
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 191
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G + L +A + ++ L YL S R +H
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVH 134
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 191
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 320 KLGQGGYGSVYKGKLLDGS----NVAVKVLNDSKGNGKE----FINEVASISRTSHVNVV 371
KLG G +G V +G+ S +VAVK L + E FI EV ++ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 372 ALLGFCL----RVAEELSS-----------------------TIGIARGLEYLHLGCSTR 404
L G L ++ EL+ + +A G+ YL S R
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNIG 463
+H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL--KTR 189
Query: 464 EVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTAL 498
S+ SD + +G+ ++EM + + NGS L
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 56/256 (21%)
Query: 277 KLSSYNSTASCLNIETFLRNYRS---LSPKRYGYADIKKMTN---SFKYKLGQGGYGSVY 330
+L S S L T + +Y + K +D+K++ + LG G +G VY
Sbjct: 29 ELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVY 88
Query: 331 KGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALLGFCLR--- 379
+G++ N VAVK L + S+ + +F+ E IS+ +H N+V +G L+
Sbjct: 89 EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148
Query: 380 --------VAEELSSTIGIARG----------LEYLHL------GCS----TRILHFDIK 411
+L S + R L+ LH+ GC +H DI
Sbjct: 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 208
Query: 412 PHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
N LL CP KI DFG+A+ R A V ++ PE F I
Sbjct: 209 ARNCLLT---CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI--F 263
Query: 466 SYKSDVYNYGMMIFEM 481
+ K+D +++G++++E+
Sbjct: 264 TSKTDTWSFGVLLWEI 279
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 320 KLGQGGYGSVYKGKLLDGS----NVAVKVLNDSKGNGKE----FINEVASISRTSHVNVV 371
KLG G +G V +G+ S +VAVK L + E FI EV ++ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 372 ALLGFCL----RVAEELSS-----------------------TIGIARGLEYLHLGCSTR 404
L G L ++ EL+ + +A G+ YL S R
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNIG 463
+H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTR 189
Query: 464 EVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTAL 498
S+ SD + +G+ ++EM + + NGS L
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 173 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 230 EAFMEGI--FTSKTDTWSFGVLLWEI 253
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGARG 448
I +G+EYL S R +H D+ NIL++ + KI+DFGLAK+ K+ + +
Sbjct: 123 ICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ + APE NI S +SDV+++G++++E+
Sbjct: 180 PIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 320 KLGQGGYGSVYKGKLLDGS----NVAVKVLNDSKGNGKE----FINEVASISRTSHVNVV 371
KLG G +G V +G+ S +VAVK L + E FI EV ++ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 372 ALLGFCL----RVAEELSS-----------------------TIGIARGLEYLHLGCSTR 404
L G L ++ EL+ + +A G+ YL S R
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNIG 463
+H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTR 189
Query: 464 EVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTAL 498
S+ SD + +G+ ++EM + + NGS L
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 56/256 (21%)
Query: 277 KLSSYNSTASCLNIETFLRNYRS---LSPKRYGYADIKKMTN---SFKYKLGQGGYGSVY 330
+L S S L T + +Y + K +D+K++ + LG G +G VY
Sbjct: 6 ELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVY 65
Query: 331 KGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALLGFCLR--- 379
+G++ N VAVK L + S+ + +F+ E IS+ +H N+V +G L+
Sbjct: 66 EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 125
Query: 380 --------VAEELSSTIGIARG----------LEYLHL------GCS----TRILHFDIK 411
+L S + R L+ LH+ GC +H DI
Sbjct: 126 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIA 185
Query: 412 PHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
N LL CP KI DFG+A+ R A V ++ PE F I
Sbjct: 186 ARNCLLT---CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI--F 240
Query: 466 SYKSDVYNYGMMIFEM 481
+ K+D +++G++++E+
Sbjct: 241 TSKTDTWSFGVLLWEI 256
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 173 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 230 EAFMEGI--FTSKTDTWSFGVLLWEI 253
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 46/200 (23%)
Query: 321 LGQGGYGSVY--KGKLLDGSNVAVKVLND----SKGNGKEFINEVASISRTSHVNVVALL 374
LG+G +G V K K+ G AVKV++ K + + + EV + + H N++ L
Sbjct: 58 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 375 ------GFCLRVAEELS--------------STIGIAR-------GLEYLHLGCSTRILH 407
G+ V E + S + AR G+ Y+H +I+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 173
Query: 408 FDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
D+KP N+LL+ +D +I DFGL+ E+ M GT YIAPEV G
Sbjct: 174 RDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEVLH---GT 227
Query: 465 VSYKSDVYNYGMMIFEMTGG 484
K DV++ G++++ + G
Sbjct: 228 YDEKCDVWSTGVILYILLSG 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G + L +A + ++ L YL S R +H
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVH 162
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 219
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 220 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G + L +A + ++ L YL S R +H
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVH 136
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 193
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 194 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 50/206 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSN------VAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
LG G +G VY+G++ N VAVK L + S+ + +F+ E IS+ +H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 373 LLGFCLR-----------VAEELSSTIGIARG----------LEYLHL------GCS--- 402
+G L+ +L S + R L+ LH+ GC
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 403 -TRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMTGARGTVGYIAP 455
+H DI N LL CP KI DFG+A+ R A V ++ P
Sbjct: 150 ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 456 EVFCRNIGEVSYKSDVYNYGMMIFEM 481
E F I + K+D +++G++++E+
Sbjct: 207 EAFMEGI--FTSKTDTWSFGVLLWEI 230
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGARG 448
I +G+EYL S R +H D+ NIL++ + KI+DFGLAK+ K+ + +
Sbjct: 136 ICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ + APE NI S +SDV+++G++++E+
Sbjct: 193 PIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKGKLLD------GSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G D + VAVK +N+S + EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 372 ALLGFCLR-------------------------------------VAEELSSTIGIARGL 394
LLG + + E + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H ++ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 198
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+APE G + SD++++G++++E+T
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGARG 448
I +G+EYL S R +H D+ NIL++ + KI+DFGLAK+ K+ + +
Sbjct: 124 ICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ + APE NI S +SDV+++G++++E+
Sbjct: 181 PIFWYAPESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G + L +A + ++ L YL S R +H
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVH 137
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 194
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 195 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 320 KLGQGGYGSVYKGKLLDGS----NVAVKVLNDSKGNGKE----FINEVASISRTSHVNVV 371
KLG G +G V +G+ S +VAVK L + E FI EV ++ H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 372 ALLGFCL----RVAEELSS-----------------------TIGIARGLEYLHLGCSTR 404
L G L ++ EL+ + +A G+ YL S R
Sbjct: 85 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 141
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNIG 463
+H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL--KTR 199
Query: 464 EVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTAL 498
S+ SD + +G+ ++EM + + NGS L
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 234
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 40/199 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS-NVAVKVLNDSKGNGKEFINE-VASISRTSHVNVVALLG--- 375
LG+G YG VY G+ L +A+K + + + ++E +A H N+V LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 376 ---FCLRVAEEL-------------------SSTIG-----IARGLEYLHLGCSTRILHF 408
F E++ TIG I GL+YLH +I+H
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHR 132
Query: 409 DIKPHNILLDE-DFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEVFCRNIGEVS 466
DIK N+L++ KISDFG +K R I T GT+ Y+APE+ +
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 467 YKSDVYNYGMMIFEMTGGR 485
+D+++ G I EM G+
Sbjct: 190 KAADIWSLGCTIIEMATGK 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 51/212 (24%)
Query: 316 SFKYKLGQGGYGSVYK------GKLLDGSNVAVKVLND-SKGNGKE-FINEVASISRT-S 366
F LG G +G V + GK VAVK+L + + KE ++E+ +S
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 367 HVNVVALLGFC-------------------------------------LRVAEELSSTIG 389
H N+V LLG C L + + L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+A+G+ +L S +H D+ N+LL KI DFGLA+ + I AR
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
V ++APE + V +SDV++YG++++E+
Sbjct: 226 VKWMAPESIFDCVYTV--QSDVWSYGILLWEI 255
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKGKLLD------GSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G D + VAVK +N+S + EF+NE + + + +VV
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 372 ALLGFCLR-------------------------------------VAEELSSTIGIARGL 394
LLG + + E + IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H ++ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 199
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+APE G + SD++++G++++E+T
Sbjct: 200 MAPESL--KDGVFTTSSDMWSFGVVLWEIT 227
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 66/241 (27%)
Query: 299 SLSPKRYGYADI----------KKMTNSFKYKLGQGGYGSVYKG------KLLDGSNVAV 342
S++P+ + AD+ +K+T S +LGQG +G VY+G K + VA+
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKITMS--RELGQGSFGMVYEGVAKGVVKDEPETRVAI 60
Query: 343 KVLNDSKGNGK--EFINEVASISRTSHVNVVALLGFC----------------------- 377
K +N++ + EF+NE + + + +VV LLG
Sbjct: 61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
Query: 378 -LRVA---------EELSSTIG----IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP 423
LR A LS I IA G+ YL+ + + +H D+ N ++ EDF
Sbjct: 121 SLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 177
Query: 424 KISDFGLAKICNRKESIISMTGARG--TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
KI DFG+ + + E+ G +G V +++PE G + SDV+++G++++E+
Sbjct: 178 KIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 233
Query: 482 T 482
Sbjct: 234 A 234
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 41/197 (20%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
DIKP N+LL KI+DFG + C+ S T GT+ Y+ PE+ + + K
Sbjct: 134 DIKPENLLLGSAGELKIADFGWS--CHAPSS--RRTTLSGTLDYLPPEMIEGRMHDE--K 187
Query: 469 SDVYNYGMMIFEMTGGR 485
D+++ G++ +E G+
Sbjct: 188 VDLWSLGVLCYEFLVGK 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 64/221 (28%)
Query: 321 LGQGGYGSVYKGKL--LDG----SNVAVKVL--NDSKGNGKEFINEVASISRTSHVNVVA 372
LG+G +G V K L G + VAVK+L N S ++ ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 373 LLGFC-------------------------------------------LRVAEELSSTIG 389
L G C L +E + T+G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 390 --------IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
I++G++YL ++H D+ NIL+ E KISDFGL++ ++S +
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
+ R V ++A E +I + +SDV+++G++++E+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIV 246
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 320 KLGQGGYGSVYKGKLLDGS----NVAVKVLNDSKGNGKE----FINEVASISRTSHVNVV 371
KLG G +G V +G+ S +VAVK L + E FI EV ++ H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 372 ALLGFCL----RVAEELSS-----------------------TIGIARGLEYLHLGCSTR 404
L G L ++ EL+ + +A G+ YL S R
Sbjct: 85 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 141
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNIG 463
+H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTR 199
Query: 464 EVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTAL 498
S+ SD + +G+ ++EM + + NGS L
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 234
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 66/241 (27%)
Query: 299 SLSPKRYGYADI----------KKMTNSFKYKLGQGGYGSVYKG------KLLDGSNVAV 342
S++P+ + AD+ +K+T S +LGQG +G VY+G K + VA+
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKITMS--RELGQGSFGMVYEGVAKGVVKDEPETRVAI 60
Query: 343 KVLNDSKGNGK--EFINEVASISRTSHVNVVALLGFC----------------------- 377
K +N++ + EF+NE + + + +VV LLG
Sbjct: 61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
Query: 378 -LRVAEE---------LSSTIG----IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP 423
LR E LS I IA G+ YL+ + + +H D+ N ++ EDF
Sbjct: 121 SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 177
Query: 424 KISDFGLAKICNRKESIISMTGARG--TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
KI DFG+ + + E+ G +G V +++PE G + SDV+++G++++E+
Sbjct: 178 KIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI 233
Query: 482 T 482
Sbjct: 234 A 234
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 41/215 (19%)
Query: 320 KLGQGGYGSVYKGKLLDGS----NVAVKVLNDSKGNGKE----FINEVASISRTSHVNVV 371
KLG G +G V +G+ S +VAVK L + E FI EV ++ H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 372 ALLGFCL----RVAEELSS-----------------------TIGIARGLEYLHLGCSTR 404
L G L ++ EL+ + +A G+ YL S R
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 135
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNIG 463
+H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTR 193
Query: 464 EVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTAL 498
S+ SD + +G+ ++EM + + NGS L
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 228
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSN----VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G+G +G V++G + N VA+K + S ++F+ E ++ + H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 375 G---------------------------FCLRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G + L +A + ++ L YL S R +H
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVH 139
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI N+L+ + C K+ DFGL++ + + + + ++APE N +
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESI--NFRRFTS 196
Query: 468 KSDVYNYGMMIFE--MTG-----GRKNVDVV 491
SDV+ +G+ ++E M G G KN DV+
Sbjct: 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 51/212 (24%)
Query: 316 SFKYKLGQGGYGSVYK------GKLLDGSNVAVKVLND-SKGNGKE-FINEVASISRT-S 366
F LG G +G V + GK VAVK+L + + KE ++E+ +S
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 367 HVNVVALLGFC-------------------------------------LRVAEELSSTIG 389
H N+V LLG C L + + L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+A+G+ +L S +H D+ N+LL KI DFGLA+ + I AR
Sbjct: 161 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
V ++APE + V +SDV++YG++++E+
Sbjct: 218 VKWMAPESIFDCVYTV--QSDVWSYGILLWEI 247
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTV 450
G+ YLH I H DIKP N+LLDE KISDFGLA + N +E +++ GT+
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTL 170
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ R DV++ G+++ M G
Sbjct: 171 PYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 86/206 (41%), Gaps = 55/206 (26%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVK-VLNDSKGNGKEFINEVASISR-TSHVNVVALLGFCL 378
+G G +G V++ KL++ VA+K VL D K F N I R H NVV L F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 379 R------------VAEELSSTI------------------------GIARGLEYLHLGCS 402
V E + T+ + R L Y+H S
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---S 159
Query: 403 TRILHFDIKPHNILLDEDF-CPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 461
I H DIKP N+LLD K+ DFG AKI E +S +R Y APE+
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRAPELI--- 213
Query: 462 IGEVSYKS--DVYNYGMMIFEMTGGR 485
G +Y + D+++ G ++ E+ G+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 372 ALLGFC------------------------LRVAEE---------LSSTIG----IARGL 394
LLG LR E LS I IA G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +
Sbjct: 137 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 191
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 192 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 219
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 45/219 (20%)
Query: 302 PKRYGYADIKKMTNS---FKYKLGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNG 352
P R G + +++ S + +G G G V G+L + G VA+K L ++
Sbjct: 35 PGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR 94
Query: 353 KEFINEVASISRTSHVNVVALLGFCLR------VAEELSS--------------TI---- 388
++F++E + + + H N++ L G R V E + + TI
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 389 ----GIARGLEYLH-LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIIS 442
G+ G+ YL LG +H D+ N+L+D + K+SDFGL+++ + ++ +
Sbjct: 155 GMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
TG + + + APE S SDV+++G++++E+
Sbjct: 211 TTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEV 247
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 47/199 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVA----- 372
K+G+G G V + G VAVK ++ K +E + NEV + H NVV
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 373 LLGFCLRVA--------------------EELSST-IGIARGLEYLHLGCSTRILHFDIK 411
L+G L V E++++ + + + L LH + ++H DIK
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 274
Query: 412 PHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
+ILL D K+SDFG ++K R++ ++ GT ++APE+ R + Y
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR----LPY 324
Query: 468 --KSDVYNYGMMIFEMTGG 484
+ D+++ G+M+ EM G
Sbjct: 325 GPEVDIWSLGIMVIEMVDG 343
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 372 ALLGFC------------------------LRVAEE---------LSSTIG----IARGL 394
LLG LR E LS I IA G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 200
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 201 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L + G VA+K L + ++F++E + + + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GI G++YL +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSAV 153
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFG++++ + E+ + G + + + APE +
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KF 211
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 212 TSASDVWSYGIVMWEV 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 42/197 (21%)
Query: 321 LGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G G V G+L + G VA+K L ++ ++F++E + + + H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 375 GFCLR------VAEELSS--------------TI--------GIARGLEYLH-LGCSTRI 405
G R V E + + TI G+ G+ YL LG
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY---- 172
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGE 464
+H D+ N+L+D + K+SDFGL+++ + ++ + TG + + + APE
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA--FRT 230
Query: 465 VSYKSDVYNYGMMIFEM 481
S SDV+++G++++E+
Sbjct: 231 FSSASDVWSFGVVMWEV 247
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 40/196 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSN---VAVKV--LNDSKGNGKEFINEVASISRTSHVNVVALL 374
++G+G +G VYKG +D VA+K+ L +++ ++ E+ +S+ +
Sbjct: 26 RIGKGSFGEVYKG--IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 375 GFCLR------------------------VAEELSSTI--GIARGLEYLHLGCSTRILHF 408
G L+ + E +TI I +GL+YLH S R +H
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLH---SERKIHR 140
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
DIK N+LL E K++DFG+A ++ I GT ++APEV ++ +K
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQS--AYDFK 196
Query: 469 SDVYNYGMMIFEMTGG 484
+D+++ G+ E+ G
Sbjct: 197 ADIWSLGITAIELAKG 212
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 37/192 (19%)
Query: 324 GGYGSVYKGKLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVVALLG------ 375
G +G VYK + + S +A + D+K + +++ E+ ++ H N+V LL
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 376 -------FC---------LRVAEELS-STIGIA-----RGLEYLHLGCSTRILHFDIKPH 413
FC L + L+ S I + L YLH +I+H D+K
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAG 137
Query: 414 NILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE-VFCRNIGE--VSYKSD 470
NIL D K++DFG++ N + I GT ++APE V C + YK+D
Sbjct: 138 NILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 471 VYNYGMMIFEMT 482
V++ G+ + EM
Sbjct: 197 VWSLGITLIEMA 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 37/146 (25%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAV--KVLNDSKGNGKEFIN-----EVASISRTSHVNVVAL 373
LG+G + +VYK + + + + K+ + K+ IN E+ + SH N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 374 L---------------------------GFCLRVAEELSSTIGIARGLEYLHLGCSTRIL 406
L L + + + +GLEYLH IL
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWIL 134
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAK 432
H D+KP+N+LLDE+ K++DFGLAK
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+L++ KI DFGLA+I + + +T
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L + G VA+K L + ++F++E + + + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GI G++YL +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSYV 138
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFG++++ + E+ + G + + + APE +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KF 196
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 197 TSASDVWSYGIVMWEV 212
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 51/213 (23%)
Query: 316 SFKYKLGQGGYGSVYKGKLLD-GSNVAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
K +LG GG+G V + D G VA+K S N + + E+ + + +H NVV+
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 373 -----------------LLGF-----------------CLRVAEELSSTI--GIARGLEY 396
LL C + E T+ I+ L Y
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 397 LHLGCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LH RI+H D+KP NI+L + KI D G AK ++ E GT+ Y+
Sbjct: 138 LH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYL 191
Query: 454 APEVFCRNIGEVSYKSDVYNYGMMIFE-MTGGR 485
APE+ + V+ D +++G + FE +TG R
Sbjct: 192 APELLEQKKYTVTV--DYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 51/213 (23%)
Query: 316 SFKYKLGQGGYGSVYKGKLLD-GSNVAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
K +LG GG+G V + D G VA+K S N + + E+ + + +H NVV+
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 373 -----------------LLGF-----------------CLRVAEELSSTI--GIARGLEY 396
LL C + E T+ I+ L Y
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 397 LHLGCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LH RI+H D+KP NI+L + KI D G AK ++ E GT+ Y+
Sbjct: 137 LH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYL 190
Query: 454 APEVFCRNIGEVSYKSDVYNYGMMIFE-MTGGR 485
APE+ + V+ D +++G + FE +TG R
Sbjct: 191 APELLEQKKYTVTV--DYWSFGTLAFECITGFR 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 67/212 (31%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG---- 375
+G GG+G V+K K +DG +K + K N ++ EV ++++ HVN+V G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNGCWDG 75
Query: 376 -------------------------FC----------LRVAEELSSTIG------IARGL 394
FC R E+L + I +G+
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTV 450
+Y+H S ++++ D+KP NI L + KI DFGL + + G R GT+
Sbjct: 136 DYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV-------TSLKNDGKRXRSKGTL 185
Query: 451 GYIAPE-VFCRNIGEVSYKSDVYNYGMMIFEM 481
Y++PE + ++ G+ + D+Y G+++ E+
Sbjct: 186 RYMSPEQISSQDYGK---EVDLYALGLILAEL 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 41/197 (20%)
Query: 321 LGQGGYGSVYKGKLLD-GSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLGF 376
+G+G YG V K + D G VA+K +D K K + E+ + + H N+V LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 377 CLR------VAEELSSTI---------------------GIARGLEYLHLGCSTRILHFD 409
C + V E + TI I G+ + H S I+H D
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRD 149
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY-- 467
IKP NIL+ + K+ DFG A+ + A T Y APE+ +G+V Y
Sbjct: 150 IKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA--TRWYRAPELL---VGDVKYGK 204
Query: 468 KSDVYNYGMMIFEMTGG 484
DV+ G ++ EM G
Sbjct: 205 AVDVWAIGCLVTEMFMG 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 92/217 (42%), Gaps = 47/217 (21%)
Query: 306 GYADIKKMTNSFKYK--LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASI 362
G D K N F Y LG+G +G V + G A+K+L K+ + +
Sbjct: 1 GAMDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTE 60
Query: 363 SR----TSHVNVVAL---------LGFCLRVA----------------EELSSTIG--IA 391
SR T H + AL L F + A EE + G I
Sbjct: 61 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 120
Query: 392 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGARG 448
LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M G
Sbjct: 121 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXFCG 172
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y+APEV N + D + G++++EM GR
Sbjct: 173 TPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 49/202 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSNV-AVKVLNDS---KGNGKEFINEVASISRT-SHVNVVALLG 375
LG+GG+ ++ D V A K++ S K + +E ++ SI R+ +H +VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 376 F---------------------------CLRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
F L E I G +YLH R++H
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 141
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEVFCRNIG 463
D+K N+ L+ED KI DFGLA + + G R GT YIAPEV + G
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEVLSKK-G 193
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
S++ DV++ G +++ + G+
Sbjct: 194 H-SFEVDVWSIGCIMYTLLVGK 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 49/202 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSNV-AVKVLNDS---KGNGKEFINEVASISRT-SHVNVVALLG 375
LG+GG+ ++ D V A K++ S K + +E ++ SI R+ +H +VV G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 376 F---------------------------CLRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
F L E I G +YLH R++H
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 163
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEVFCRNIG 463
D+K N+ L+ED KI DFGLA + + G R GT YIAPEV + G
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEVLSKK-G 215
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
S++ DV++ G +++ + G+
Sbjct: 216 H-SFEVDVWSIGCIMYTLLVGK 236
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 53/205 (25%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALLGFC 377
+G+G +G VY G+ VA+++++ D++ K F EV + +T H NVV +G C
Sbjct: 41 IGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 378 L------------------------RVAEELSSTIGIA----RGLEYLHLGCSTRILHFD 409
+ ++ +++ T IA +G+ YLH + ILH D
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKD 155
Query: 410 IKPHNILLDEDFCPKISDFGLAKI-----CNRKESIISMTGARGTVGYIAPEVFCRNIG- 463
+K N+ D I+DFGL I R+E + + G + ++APE+ R +
Sbjct: 156 LKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQN--GWLCHLAPEI-IRQLSP 211
Query: 464 -------EVSYKSDVYNYGMMIFEM 481
S SDV+ G + +E+
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 49/202 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSNV-AVKVLNDS---KGNGKEFINEVASISRT-SHVNVVALLG 375
LG+GG+ ++ D V A K++ S K + +E ++ SI R+ +H +VV G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 376 F---------------------------CLRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
F L E I G +YLH R++H
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 165
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEVFCRNIG 463
D+K N+ L+ED KI DFGLA + + G R GT YIAPEV + G
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEVLSKK-G 217
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
S++ DV++ G +++ + G+
Sbjct: 218 H-SFEVDVWSIGCIMYTLLVGK 238
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 42/198 (21%)
Query: 321 LGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G L L G VA+K L ++ ++F++E + + + H NV+ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GIA G++YL +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYV 131
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG---TVGYIAPEVFCRNIG 463
H + NIL++ + K+SDFGL++ S + T A G + + APE
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--QYR 189
Query: 464 EVSYKSDVYNYGMMIFEM 481
+ + SDV++YG++++E+
Sbjct: 190 KFTSASDVWSYGIVMWEV 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 49/202 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSNV-AVKVLNDS---KGNGKEFINEVASISRT-SHVNVVALLG 375
LG+GG+ ++ D V A K++ S K + +E ++ SI R+ +H +VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 376 F---------------------------CLRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
F L E I G +YLH R++H
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 141
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEVFCRNIG 463
D+K N+ L+ED KI DFGLA + + G R GT YIAPEV + G
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEVLSKK-G 193
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
S++ DV++ G +++ + G+
Sbjct: 194 H-SFEVDVWSIGCIMYTLLVGK 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYKGKL-LDGSN---VAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
+G G +G V G+L + G VA+K L + ++F++E + + + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 375 GFCLR----------------------------VAEELSSTIGIARGLEYLHLGCSTRIL 406
G + V + + GI G++YL +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSYV 132
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFCRNIGEV 465
H D+ NIL++ + K+SDFG++++ + E+ + G + + + APE +
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KF 190
Query: 466 SYKSDVYNYGMMIFEM 481
+ SDV++YG++++E+
Sbjct: 191 TSASDVWSYGIVMWEV 206
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 47/199 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVA----- 372
K+G+G G V + G VAVK ++ K +E + NEV + H NVV
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 373 LLGFCLRVA--------------------EELSST-IGIARGLEYLHLGCSTRILHFDIK 411
L+G L V E++++ + + + L LH + ++H DIK
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 152
Query: 412 PHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
+ILL D K+SDFG ++K R++ ++ GT ++APE+ R + Y
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR----LPY 202
Query: 468 --KSDVYNYGMMIFEMTGG 484
+ D+++ G+M+ EM G
Sbjct: 203 GPEVDIWSLGIMVIEMVDG 221
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 49/202 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSNV-AVKVLNDS---KGNGKEFINEVASISRT-SHVNVVALLG 375
LG+GG+ ++ D V A K++ S K + +E ++ SI R+ +H +VV G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 376 F---------------------------CLRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
F L E I G +YLH R++H
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 145
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEVFCRNIG 463
D+K N+ L+ED KI DFGLA + + G R GT YIAPEV + G
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEVLSKK-G 197
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
S++ DV++ G +++ + G+
Sbjct: 198 H-SFEVDVWSIGCIMYTLLVGK 218
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 47/199 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVA----- 372
K+G+G G V + G VAVK ++ K +E + NEV + H NVV
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 373 LLGFCLRVA--------------------EELSST-IGIARGLEYLHLGCSTRILHFDIK 411
L+G L V E++++ + + + L LH + ++H DIK
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 154
Query: 412 PHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
+ILL D K+SDFG ++K R++ ++ GT ++APE+ R + Y
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR----LPY 204
Query: 468 --KSDVYNYGMMIFEMTGG 484
+ D+++ G+M+ EM G
Sbjct: 205 GPEVDIWSLGIMVIEMVDG 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 72/221 (32%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG---- 375
+G GG+G V+K K +DG ++ + K N ++ EV ++++ HVN+V G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNEKAEREVKALAKLDHVNIVHYNGCWDG 76
Query: 376 --------------------------------------FC----------LRVAEELSST 387
FC R E+L
Sbjct: 77 FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 136
Query: 388 IG------IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
+ I +G++Y+H S +++H D+KP NI L + KI DFGL
Sbjct: 137 LALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--- 190
Query: 442 SMTGARGTVGYIAPE-VFCRNIGEVSYKSDVYNYGMMIFEM 481
T ++GT+ Y++PE + ++ G+ + D+Y G+++ E+
Sbjct: 191 KRTRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAEL 228
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 56/234 (23%)
Query: 282 NSTASCLNIETFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGK-LLDGSNV 340
NS ASC + + + NYR L +G+G + V + +L G V
Sbjct: 2 NSIASCADEQPHIGNYRLLKT------------------IGKGNFAKVKLARHILTGREV 43
Query: 341 AVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGFC-------------------- 377
A+K+++ ++ N ++ EV + +H N+V L
Sbjct: 44 AIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD 103
Query: 378 -------LRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL 430
++ E S I ++Y H RI+H D+K N+LLD D KI+DFG
Sbjct: 104 YLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGF 160
Query: 431 AKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ + + GA Y APE+F + + DV++ G++++ + G
Sbjct: 161 SNEFTVGGKLDAFCGAP---PYAAPELFQGKKYD-GPEVDVWSLGVILYTLVSG 210
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 49/202 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSNV-AVKVLNDS---KGNGKEFINEVASISRT-SHVNVVALLG 375
LG+GG+ ++ D V A K++ S K + +E ++ SI R+ +H +VV G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 376 F---------------------------CLRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
F L E I G +YLH R++H
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 139
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEVFCRNIG 463
D+K N+ L+ED KI DFGLA + + G R GT YIAPEV + G
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEVLSKK-G 191
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
S++ DV++ G +++ + G+
Sbjct: 192 H-SFEVDVWSIGCIMYTLLVGK 212
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 47/199 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVA----- 372
K+G+G G V + G VAVK ++ K +E + NEV + H NVV
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 373 LLGFCLRVA--------------------EELSST-IGIARGLEYLHLGCSTRILHFDIK 411
L+G L V E++++ + + + L LH + ++H DIK
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 143
Query: 412 PHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
+ILL D K+SDFG ++K R++ ++ GT ++APE+ R + Y
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR----LPY 193
Query: 468 --KSDVYNYGMMIFEMTGG 484
+ D+++ G+M+ EM G
Sbjct: 194 GPEVDIWSLGIMVIEMVDG 212
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 198 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 114 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 171 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 200
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 188 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 316 SFKYKLGQ----GGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI----NEVASISRTS 366
S +Y+LG+ GG V+ + L +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 367 HVNVVALL---------------------GFCLRVAEELSSTIGIARGLEYLHLGCSTR- 404
H +VA+ G LR + R +E + C
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 405 ------ILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARGTVGYIAPEV 457
I+H D+KP NI++ K+ DFG+A+ I + S+ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ V +SDVY+ G +++E+ G
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 195 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 188 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 316 SFKYKLGQ----GGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI----NEVASISRTS 366
S +Y+LG+ GG V+ + L +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 367 HVNVVALL---------------------GFCLRVAEELSSTIGIARGLEYLHLGCSTR- 404
H +VA+ G LR + R +E + C
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 405 ------ILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARGTVGYIAPEV 457
I+H D+KP NI++ K+ DFG+A+ I + S+ GT Y++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ V +SDVY+ G +++E+ G
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVLTG 215
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 196 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 187 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 116 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 173 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 202
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 372 ALLGFC------------------------LRVAEE---------LSSTIG----IARGL 394
LLG LR E LS I IA G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +
Sbjct: 143 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 197
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 198 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 225
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 177 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 177 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 47/199 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVA----- 372
K+G+G G V + G VAVK ++ K +E + NEV + H NVV
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 373 LLGFCLRVA--------------------EELSST-IGIARGLEYLHLGCSTRILHFDIK 411
L+G L V E++++ + + + L LH + ++H DIK
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 147
Query: 412 PHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
+ILL D K+SDFG ++K R++ ++ GT ++APE+ R + Y
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR----LPY 197
Query: 468 --KSDVYNYGMMIFEMTGG 484
+ D+++ G+M+ EM G
Sbjct: 198 GPEVDIWSLGIMVIEMVDG 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 47/199 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVA----- 372
K+G+G G V + G VAVK ++ K +E + NEV + H NVV
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 373 LLGFCLRVA--------------------EELSST-IGIARGLEYLHLGCSTRILHFDIK 411
L+G L V E++++ + + + L LH + ++H DIK
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 197
Query: 412 PHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
+ILL D K+SDFG ++K R++ ++ GT ++APE+ R + Y
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR----LPY 247
Query: 468 --KSDVYNYGMMIFEMTGG 484
+ D+++ G+M+ EM G
Sbjct: 248 GPEVDIWSLGIMVIEMVDG 266
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 60/223 (26%)
Query: 320 KLGQGGYGSVYKGKLLDG-SNVAVKVLNDSKGNG--------------KEFINEVASISR 364
KLG G YG V K +G S A+KV+ S+ + +E NE++ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 365 TSHVNVVALLG------FCLRVAE-----ELSSTI----------------GIARGLEYL 397
H N++ L + V E EL I I G+ YL
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYL 162
Query: 398 HLGCSTRILHFDIKPHNILLDED---FCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
H I+H DIKP NILL+ KI DFGL+ ++ + GT YIA
Sbjct: 163 H---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTAYYIA 216
Query: 455 PEVFCRNIGEVSYKSDVYNYGMMIFEMT------GGRKNVDVV 491
PEV + E K DV++ G++++ + GG+ + D++
Sbjct: 217 PEVLKKKYNE---KCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 479 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 536 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 565
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 478 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 535 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 564
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 372 ALLGFC------------------------LRVAEE---------LSSTIG----IARGL 394
LLG LR E LS I IA G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 200
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 201 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 372 ALLGFC------------------------LRVAEE---------LSSTIG----IARGL 394
LLG LR E LS I IA G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +
Sbjct: 139 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 193
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 194 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 126 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 183 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 212
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 372 ALLGFC------------------------LRVA---------EELSSTIG----IARGL 394
LLG LR A LS I IA G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +
Sbjct: 142 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 196
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 197 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 134 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 191 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 372 ALLGFC------------------------LRVAEE---------LSSTIG----IARGL 394
LLG LR E LS I IA G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 199
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 200 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 227
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 193 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARG 448
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T +
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFE 480
V + APE C N + S KSDV+++G++++E
Sbjct: 193 PVKWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 372 ALLGFC------------------------LRVAEE---------LSSTIG----IARGL 394
LLG LR E LS I IA G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 199
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 200 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 227
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+ +G+EYLH +I+H DIKP N+L+ ED KI+DFG++ ++++S T GT
Sbjct: 146 LIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--VGT 200
Query: 450 VGYIAPEVFCRNIGEVSYKS-DVYNYGMMIF 479
++APE S K+ DV+ G+ ++
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 39/196 (19%)
Query: 321 LGQGGYGSVYKGKL-LDGSNVAVKVLNDSKGNGKEFI----NEVASISRTSHVNVVALLG 375
LG G +G V GK L G VAVK+LN K + + E+ ++ H +++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 376 FCL-------------------------RVAEELSSTI--GIARGLEYLHLGCSTRILHF 408
R+ E+ S + I G++Y H ++H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH---RHMVVHR 140
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
D+KP N+LLD KI+DFGL+ + + E + + G+ Y APEV + +
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVISGRL-YAGPE 196
Query: 469 SDVYNYGMMIFEMTGG 484
D+++ G++++ + G
Sbjct: 197 VDIWSSGVILYALLCG 212
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 57/218 (26%)
Query: 316 SFKYKLGQGGYGSVYK------GKLLDGSNVAVKVLND-SKGNGKE-FINEVASISRT-S 366
F LG G +G V + GK VAVK+L + + KE ++E+ +S
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 367 HVNVVALLGFC---------------------LR----------------VAEELSS--- 386
H N+V LLG C LR E+LSS
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 387 ---TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 443
+ +A+G+ +L S +H D+ N+LL KI DFGLA+ + I
Sbjct: 169 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 444 TGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
AR V ++APE + V +SDV++YG++++E+
Sbjct: 226 GNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 261
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R++++ GT+ Y+ PE+ + +
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC------GTLDYLPPEMIEGRMHDE- 186
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 187 -KVDLWSLGVLCYEFLVGK 204
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 316 SFKYKLGQ----GGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFI----NEVASISRTS 366
S +Y+LG+ GG V+ + L +VAVKVL F E + + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 367 HVNVVALL---------------------GFCLRVAEELSSTIGIARGLEYLHLGCSTR- 404
H +VA+ G LR + R +E + C
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 147
Query: 405 ------ILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARGTVGYIAPEV 457
I+H D+KP NI++ K+ DFG+A+ I + S+ GT Y++PE
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 458 FCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ V +SDVY+ G +++E+ G
Sbjct: 208 ARGD--SVDARSDVYSLGCVLYEVLTG 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 50/203 (24%)
Query: 321 LGQGGYGSV---YKGKLLDGSNVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVALL 374
+G G YG+V G+ G+ VA+K L S+ K E+ + H NV+ LL
Sbjct: 33 VGSGAYGAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 375 G-------------FCLRVAEELSSTIG-------------------IARGLEYLHLGCS 402
F L V + + +G + +GL Y+H +
Sbjct: 91 DVFTPDETLDDFTDFYL-VMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---A 146
Query: 403 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 462
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APEV N
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVIL-NW 200
Query: 463 GEVSYKSDVYNYGMMIFEMTGGR 485
+ D+++ G ++ EM G+
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 55/216 (25%)
Query: 316 SFKYKLGQGGYGSVYK------GKLLDGSNVAVKVLNDSK-GNGKE-FINEVASISRT-S 366
F LG G +G V + GK VAVK+L + + KE ++E+ +S
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 367 HVNVVALLGFCL-------------------------RVAEE----------------LS 385
H N+V LLG C RV E L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 386 STIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 445
+ +A+G+ +L S +H D+ N+LL KI DFGLA+ + I
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
AR V ++APE + V +SDV++YG++++E+
Sbjct: 226 ARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKIC 434
G L + + L + +A+G+ +L S +H D+ N+LL KI DFGLA+
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 435 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ I AR V ++APE + V +SDV++YG++++E+
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 253
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T + L+ +H S +H D+KP N+LLD+ K++DFG N KE ++ A
Sbjct: 174 TAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTA 229
Query: 447 RGTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGG 484
GT YI+PEV G+ Y + D ++ G+ ++EM G
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T + L+ +H S +H D+KP N+LLD+ K++DFG N KE ++ A
Sbjct: 179 TAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTA 234
Query: 447 RGTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGG 484
GT YI+PEV G+ Y + D ++ G+ ++EM G
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVAL-- 373
LG+G +G+VY + K + V K + G + EV S H N++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 374 ----------------LGFCLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
LG R ++LS +A L Y H S R++H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 158
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 159 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 210
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 211 E--KVDLWSLGVLCYEFLVGK 229
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVAL-- 373
LG+G +G+VY + K + V K + G + EV S H N++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 374 ----------------LGFCLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
LG R ++LS +A L Y H S R++H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 158
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R++ + GT+ Y+ PE+ + +
Sbjct: 159 DIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMIEGRMHDE- 211
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 212 -KVDLWSLGVLCYEFLVGK 229
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 55/216 (25%)
Query: 316 SFKYKLGQGGYGSVYK------GKLLDGSNVAVKVLNDSK-GNGKE-FINEVASISRT-S 366
F LG G +G V + GK VAVK+L + + KE ++E+ +S
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 367 HVNVVALLGFCL-------------------------RVAEE----------------LS 385
H N+V LLG C RV E L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 386 STIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 445
+ +A+G+ +L S +H D+ N+LL KI DFGLA+ + I
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
AR V ++APE + V +SDV++YG++++E+
Sbjct: 226 ARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T + L+ +H S +H D+KP N+LLD+ K++DFG N KE ++ A
Sbjct: 179 TAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTA 234
Query: 447 RGTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGG 484
GT YI+PEV G+ Y + D ++ G+ ++EM G
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVAL-- 373
LG+G +G+VY + K + V K + G + EV S H N++ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 374 ----------------LGFCLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
LG R ++LS +A L Y H S R++H
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 149
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 150 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 202 E--KVDLWSLGVLCYEFLVGK 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 62/243 (25%)
Query: 296 NYRSLSPKRYGY---ADIKKMTNSFKYKLGQGGYGSVYKG------KLLDGSNVAVKVLN 346
NY + P + Y + + SF LG G +G V + K VAVK+L
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 347 DSK--GNGKEFINEVASISRT-SHVNVVALLGFC------LRVAE--------------- 382
S + ++E+ +S +H+N+V LLG C L + E
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 383 ------------------------ELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLD 418
LS + +A+G+ +L S +H D+ NILL
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLT 202
Query: 419 EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMI 478
KI DFGLA+ + + AR V ++APE + +++SDV++YG+ +
Sbjct: 203 HGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFL 260
Query: 479 FEM 481
+E+
Sbjct: 261 WEL 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 45/198 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 376 F-------------------------CLRVAEELSST--IGIARGLEYLHLGCSTRILHF 408
+ R E+ ++T +A L Y H S R++H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL + KI+DFG + +R++++ GT+ Y+ PE+ + +
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC------GTLDYLPPEMIEGRMHDE- 189
Query: 467 YKSDVYNYGMMIFEMTGG 484
K D+++ G++ +E G
Sbjct: 190 -KVDLWSLGVLCYEFLVG 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 75/251 (29%)
Query: 301 SPKRYGYADIKKMTNSFKYK-----------LGQGGYGSVYKGKLLDGS------NVAVK 343
S Y Y D ++ K++ LG G +G V S VAVK
Sbjct: 22 SDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK 81
Query: 344 VLNDSKGNGKE--FINEVASISRT-SHVNVVALLGFCL---------------------- 378
+L + + + ++E+ +++ SH N+V LLG C
Sbjct: 82 MLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 141
Query: 379 -----------------RVAEE-----------LSSTIGIARGLEYLHLGCSTRILHFDI 410
R+ EE L +A+G+E+L +H D+
Sbjct: 142 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDL 198
Query: 411 KPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 470
N+L+ KI DFGLA+ + + AR V ++APE I + KSD
Sbjct: 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI--KSD 256
Query: 471 VYNYGMMIFEM 481
V++YG++++E+
Sbjct: 257 VWSYGILLWEI 267
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 62/243 (25%)
Query: 296 NYRSLSPKRYGY---ADIKKMTNSFKYKLGQGGYGSVYKG------KLLDGSNVAVKVLN 346
NY + P + Y + + SF LG G +G V + K VAVK+L
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62
Query: 347 DSK--GNGKEFINEVASISRT-SHVNVVALLGFC------LRVAE--------------- 382
S + ++E+ +S +H+N+V LLG C L + E
Sbjct: 63 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122
Query: 383 ------------------------ELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLD 418
LS + +A+G+ +L S +H D+ NILL
Sbjct: 123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLT 179
Query: 419 EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMI 478
KI DFGLA+ + + AR V ++APE + +++SDV++YG+ +
Sbjct: 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFL 237
Query: 479 FEM 481
+E+
Sbjct: 238 WEL 240
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 62/243 (25%)
Query: 296 NYRSLSPKRYGY---ADIKKMTNSFKYKLGQGGYGSVYKG------KLLDGSNVAVKVLN 346
NY + P + Y + + SF LG G +G V + K VAVK+L
Sbjct: 21 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 80
Query: 347 DSK--GNGKEFINEVASISRT-SHVNVVALLGFC------LRVAE--------------- 382
S + ++E+ +S +H+N+V LLG C L + E
Sbjct: 81 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 140
Query: 383 ------------------------ELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLD 418
LS + +A+G+ +L S +H D+ NILL
Sbjct: 141 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLT 197
Query: 419 EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMI 478
KI DFGLA+ + + AR V ++APE + +++SDV++YG+ +
Sbjct: 198 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFL 255
Query: 479 FEM 481
+E+
Sbjct: 256 WEL 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 62/243 (25%)
Query: 296 NYRSLSPKRYGY---ADIKKMTNSFKYKLGQGGYGSVYKG------KLLDGSNVAVKVLN 346
NY + P + Y + + SF LG G +G V + K VAVK+L
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 347 DSK--GNGKEFINEVASISRT-SHVNVVALLGFC------LRVAE--------------- 382
S + ++E+ +S +H+N+V LLG C L + E
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 383 ------------------------ELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLD 418
LS + +A+G+ +L S +H D+ NILL
Sbjct: 146 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLT 202
Query: 419 EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMI 478
KI DFGLA+ + + AR V ++APE + +++SDV++YG+ +
Sbjct: 203 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFL 260
Query: 479 FEM 481
+E+
Sbjct: 261 WEL 263
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 47/215 (21%)
Query: 308 ADIKKMTNSFKYK--LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASISR 364
A K N F Y LG+G +G V + G A+K+L K+ + + SR
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 365 ----TSHVNVVAL---------LGFCLRVA----------------EELSSTIG--IARG 393
T H + AL L F + A EE + G I
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 120
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGARGTV 450
LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M GT
Sbjct: 121 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKTFCGTP 172
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
Y+APEV N + D + G++++EM GR
Sbjct: 173 EYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 188
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 189 -KVDLWSLGVLCYEFLVGK 206
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+ GLEYLH +H D+K NILL ED +I+DFG++ I +
Sbjct: 130 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 450 VG---YIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
VG ++APEV + G +K+D++++G+ E+ G
Sbjct: 187 VGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG 223
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 134
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 135 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGRMHD 186
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 187 E--KVDLWSLGVLCYEFLVGK 205
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 59/220 (26%)
Query: 316 SFKYKLGQGGYGSVYKG------KLLDGSNVAVKVLNDSK--GNGKEFINEVASISRT-S 366
SF LG G +G V + K VAVK+L S + ++E+ +S +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 367 HVNVVALLGFC------LRVAE-------------------------------------- 382
H+N+V LLG C L + E
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 383 -ELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
LS + +A+G+ +L S +H D+ NILL KI DFGLA+ + +
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
AR V ++APE + +++SDV++YG+ ++E+
Sbjct: 219 VKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFLWEL 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 133
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 134 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 185
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 186 E--KVDLWSLGVLCYEFLVGK 204
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 185
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 186 -KVDLWSLGVLCYEFLVGK 203
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARG 448
I RGL+Y+H S +LH D+KP N+LL+ KI DFGLA++ + +
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
T Y APE+ + G + D+++ G ++ EM R
Sbjct: 195 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNR 230
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 133 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 184
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 133 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTELCGTLDYLPPEMIEGRMHD 184
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 190
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 191 -KVDLWSLGVLCYEFLVGK 208
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+ GLEYLH +H D+K NILL ED +I+DFG++ I +
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 450 VG---YIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
VG ++APEV + G +K+D++++G+ E+ G
Sbjct: 182 VGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 54/210 (25%)
Query: 320 KLGQGGYGSVYKG------KLLDGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVV 371
+LGQG +G VY+G K + VA+K +N++ + EF+NE + + + +VV
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 372 ALLGFC------------------------LRVAEE---------LSSTIG----IARGL 394
LLG LR E LS I IA G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 452
YL+ + + +H D+ N + EDF KI DFG+ + + E+ G +G V +
Sbjct: 139 AYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 193
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
++PE G + SDV+++G++++E+
Sbjct: 194 MSPESL--KDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDE-----DFCPKISDFGL-AKICNRKESIISMTGA 446
GL +LH S I+H D+KPHNIL+ ISDFGL K+ + S +G
Sbjct: 130 GLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 447 RGTVGYIAPEVFCRNIGE-VSYKSDVYNYGMMIF 479
GT G+IAPE+ + E +Y D+++ G + +
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY 220
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 138 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 189
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 90/212 (42%), Gaps = 47/212 (22%)
Query: 311 KKMTNSFKYK--LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASISR--- 364
K N F Y LG+G +G V + G A+K+L K+ + + SR
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 365 -TSHVNVVAL---------LGFCLRVA----------------EELSSTIG--IARGLEY 396
T H + AL L F + A EE + G I LEY
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGARGTVGYI 453
LH S +++ DIK N++LD+D KI+DFGL KE I +M GT Y+
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKTFCGTPEYL 172
Query: 454 APEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
APEV N + D + G++++EM GR
Sbjct: 173 APEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 133 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 184
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGA 446
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKTF 165
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT Y+APEV N + D + G++++EM GR
Sbjct: 166 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEMIEGRMHDE- 188
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 189 -KVDLWSLGVLCYEFLVGK 206
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 46/200 (23%)
Query: 321 LGQGGYGSVY--KGKLLDGSNVAVKVLND----SKGNGKEFINEVASISRTSHVNVVALL 374
LG+G +G V K K+ G AVKV++ K + + + EV + + H N+ L
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 375 ------GFCLRVAEELS--------------STIGIAR-------GLEYLHLGCSTRILH 407
G+ V E + S + AR G+ Y H +I+H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXH---KNKIVH 149
Query: 408 FDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
D+KP N+LL+ +D +I DFGL+ E+ GT YIAPEV G
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYYIAPEVLH---GT 203
Query: 465 VSYKSDVYNYGMMIFEMTGG 484
K DV++ G++++ + G
Sbjct: 204 YDEKCDVWSTGVILYILLSG 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 42/216 (19%)
Query: 299 SLSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNG 352
S+ +YG A + N LG+G +G VY+G + NVAVK + N
Sbjct: 1 SMGGPQYGIAREDVVLNRI---LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK 57
Query: 353 KEFINEVASISRTSHVNVVALLGFC---------------------------LRVAEELS 385
++F++E + H ++V L+G L+V +
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL 117
Query: 386 STIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 445
++ I + + YL S +H DI NIL+ C K+ DFGL++ E +
Sbjct: 118 YSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASV 173
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
R + +++PE N + SDV+ + + ++E+
Sbjct: 174 TRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEI 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGA 446
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 165
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT Y+APEV N + D + G++++EM GR
Sbjct: 166 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +GL+YLH S + +H DIK N+LL E K++DFG+A ++ I GT
Sbjct: 129 ILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGT 183
Query: 450 VGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGGR 485
++APEV I + +Y K+D+++ G+ E+ G
Sbjct: 184 PFWMAPEV----IQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 90/212 (42%), Gaps = 47/212 (22%)
Query: 311 KKMTNSFKYK--LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFINEVASISR--- 364
K N F Y LG+G +G V + G A+K+L K+ + + SR
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 365 -TSHVNVVAL---------LGFCLRVA----------------EELSSTIG--IARGLEY 396
T H + AL L F + A EE + G I LEY
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 397 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGARGTVGYI 453
LH S +++ DIK N++LD+D KI+DFGL KE I +M GT Y+
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXFCGTPEYL 172
Query: 454 APEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
APEV N + D + G++++EM GR
Sbjct: 173 APEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 45/198 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 376 F-------------------------CLRVAEELSST--IGIARGLEYLHLGCSTRILHF 408
+ R E+ ++T +A L Y H S R++H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL + KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 189
Query: 467 YKSDVYNYGMMIFEMTGG 484
K D+++ G++ +E G
Sbjct: 190 -KVDLWSLGVLCYEFLVG 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGA 446
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 165
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT Y+APEV N + D + G++++EM GR
Sbjct: 166 CGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 321 LGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVALLGF-- 376
LG G +G V+K + G +A K++ KE + NE++ +++ H N++ L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 377 ----CLRVAE-------------------ELSSTI---GIARGLEYLHLGCSTRILHFDI 410
+ V E EL + + I G+ ++H ILH D+
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDL 213
Query: 411 KPHNIL-LDEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
KP NIL ++ D KI DFGLA+ +E + GT ++APEV N VS+
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVV--NYDFVSFP 268
Query: 469 SDVYNYGMMIFEMTGG 484
+D+++ G++ + + G
Sbjct: 269 TDMWSVGVIAYMLLSG 284
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ EE+ + IA RGL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 110 RIPEEILGKVSIAVLRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVS----- 162
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I SM + GT Y+APE S +SD+++ G+ + E+ GR
Sbjct: 163 GQLIDSMANSFVGTRSYMAPERLQGT--HYSVQSDIWSMGLSLVELAVGR 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 380 VAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKE 438
+A+ L I G+ YLH + +H D+ N+LLD D KI DFGLAK + E
Sbjct: 133 LAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189
Query: 439 SIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
V + APE C + Y SDV+++G+ ++E+
Sbjct: 190 XYRVREDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLYEL 230
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R++ + GT+ Y+ PE+ + +
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMIEGRMHDE- 188
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 189 -KVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 131
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 132 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 184
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 185 -KVDLWSLGVLCYEFLVGK 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEMIEGRMHDE- 185
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 186 -KVDLWSLGVLCYEFLVGK 203
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 39/194 (20%)
Query: 321 LGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFINEVASISRTSHVNVVALL 374
LG+G +G VY+G + NVAVK + N ++F++E + H ++V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 375 GFC---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILH 407
G L+V + ++ I + + YL S +H
Sbjct: 76 GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVH 132
Query: 408 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
DI NIL+ C K+ DFGL++ E + R + +++PE N +
Sbjct: 133 RDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESI--NFRRFTT 189
Query: 468 KSDVYNYGMMIFEM 481
SDV+ + + ++E+
Sbjct: 190 ASDVWMFAVCMWEI 203
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I+ L YLH I++ D+K N+LLD + K++D+G+ K R S GT
Sbjct: 130 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GT 184
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVV 491
YIAPE+ + + D + G+++FEM GR D+V
Sbjct: 185 PNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 136 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGRMHD 187
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 188 E--KVDLWSLGVLCYEFLVGK 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 188
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 189 -KVDLWSLGVLCYEFLVGK 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I+ L YLH I++ D+K N+LLD + K++D+G+ K R S GT
Sbjct: 162 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--GT 216
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVV 491
YIAPE+ + + D + G+++FEM GR D+V
Sbjct: 217 PNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 382 EELSSTIG-IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNR 436
EE +S I I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA +
Sbjct: 115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HE 168
Query: 437 KESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
E + GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 304 RYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGS----NVAVKVLND--SKGNGKEFIN 357
+YG A + N LG+G +G VY+G + NVAVK + N ++F++
Sbjct: 18 QYGIAREDVVLNRI---LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 74
Query: 358 EVASISRTSHVNVVALLGFC---------------------------LRVAEELSSTIGI 390
E + H ++V L+G L+V + ++ I
Sbjct: 75 EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 134
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 450
+ + YL S +H DI NIL+ C K+ DFGL++ E + R +
Sbjct: 135 CKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPI 190
Query: 451 GYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+++PE N + SDV+ + + ++E+
Sbjct: 191 KWMSPESI--NFRRFTTASDVWMFAVCMWEI 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 133 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMIEGRMHD 184
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 136
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 137 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 189
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 190 -KVDLWSLGVLCYEFLVGK 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I+ L YLH I++ D+K N+LLD + K++D+G+ K R S GT
Sbjct: 119 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GT 173
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVV 491
YIAPE+ + + D + G+++FEM GR D+V
Sbjct: 174 PNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 376 F---CLRVA----------------------EELSST--IGIARGLEYLHLGCSTRILHF 408
+ RV E+ ++T +A L Y H S R++H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 138 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 132
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+ + +
Sbjct: 133 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTXLCGTLDYLPPEMIEGRMHD 184
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 377 CLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICN 435
C+ +A+ L I G+ YLH + +H + N+LLD D KI DFGLAK +
Sbjct: 108 CVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
Query: 436 RKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
E V + APE C + Y SDV+++G+ ++E+
Sbjct: 165 GHEYYRVREDGDSPVFWYAPE--CLKECKFYYASDVWSFGVTLYEL 208
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-- 447
I GL++LH S I++ D+K NILLD+D KI+DFG+ KE+++
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMC-----KENMLGDAKTNEF 179
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT YIAPE+ + ++ D +++G++++EM G+
Sbjct: 180 CGTPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 377 CLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICN 435
C+ +A+ L I G+ YLH + +H + N+LLD D KI DFGLAK +
Sbjct: 107 CVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
Query: 436 RKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
E V + APE C + Y SDV+++G+ ++E+
Sbjct: 164 GHEYYRVREDGDSPVFWYAPE--CLKECKFYYASDVWSFGVTLYEL 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-- 447
I GL++LH S I++ D+K NILLD+D KI+DFG+ KE+++
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMC-----KENMLGDAKTNXF 178
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT YIAPE+ + ++ D +++G++++EM G+
Sbjct: 179 CGTPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 369 NVVALLGFCLRVAEELSSTIGIARGLEYLHL--------GCSTRILHFDIKPHNILLDED 420
N++ C VAE +S RGL YLH G I H D K N+LL D
Sbjct: 107 NIITWNELC-HVAETMS------RGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSD 159
Query: 421 FCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIG---EVSYKSDVYNYGMM 477
++DFGLA + G GT Y+APEV I + + D+Y G++
Sbjct: 160 LTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 219
Query: 478 IFEMTGGRKNVD 489
++E+ K D
Sbjct: 220 LWELVSRCKAAD 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I+ L YLH I++ D+K N+LLD + K++D+G+ K R S GT
Sbjct: 115 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GT 169
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVV 491
YIAPE+ + + D + G+++FEM GR D+V
Sbjct: 170 PNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 376 F---CLRVA----------------------EELSST--IGIARGLEYLHLGCSTRILHF 408
+ RV E+ ++T +A L Y H S R++H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ + GT+ Y+ PE+ + +
Sbjct: 138 DIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX------GTLDYLPPEMIEGRMHDE- 190
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 191 -KVDLWSLGVLCYEFLVGK 208
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +GL+YLH S + +H DIK N+LL E K++DFG+A ++ I GT
Sbjct: 128 ILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGT 182
Query: 450 VGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGGR 485
++APEV I + +Y K+D+++ G+ E+ G
Sbjct: 183 PFWMAPEV----IKQSAYDSKADIWSLGITAIELARGE 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 382 EELSSTIG-IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNR 436
EE +S I I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA +
Sbjct: 115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HE 168
Query: 437 KESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
E + GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +GL+YLH S + +H DIK N+LL E K++DFG+A ++ I GT
Sbjct: 113 ILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGT 167
Query: 450 VGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGGR 485
++APEV I + +Y K+D+++ G+ E+ G
Sbjct: 168 PFWMAPEV----IKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +GL+YLH S + +H DIK N+LL E K++DFG+A ++ I GT
Sbjct: 113 ILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGT 167
Query: 450 VGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGGR 485
++APEV I + +Y K+D+++ G+ E+ G
Sbjct: 168 PFWMAPEV----IKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 382 EELSSTIG-IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNR 436
EE +S I I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA +
Sbjct: 115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HE 168
Query: 437 KESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
E + GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 376 FCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNIL-LDED---FCPKISDFGLA 431
F R A + TIG + +EYLH S ++H D+KP NIL +DE C +I DFG A
Sbjct: 118 FSEREASFVLHTIG--KTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
K R E+ + MT T ++APEV R Y D+++ G++++ M G
Sbjct: 173 KQL-RAENGLLMTPCY-TANFVAPEVLKRQ----GYDEGCDIWSLGILLYTMLAG 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
+LH D+KP N+ LD K+ DFGLA+I N S GT Y++PE R
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK--AFVGTPYYMSPEQMNR---- 190
Query: 465 VSY--KSDVYNYGMMIFEM 481
+SY KSD+++ G +++E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 382 EELSSTIG-IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNR 436
EE +S I I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA +
Sbjct: 115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HE 168
Query: 437 KESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
E + GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
+LH D+KP N+ LD K+ DFGLA+I N E GT Y++PE R
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVGTPYYMSPEQMNR---- 190
Query: 465 VSY--KSDVYNYGMMIFEM 481
+SY KSD+++ G +++E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 376 FCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNIL-LDED---FCPKISDFGLA 431
F R A + TIG + +EYLH S ++H D+KP NIL +DE C +I DFG A
Sbjct: 118 FSEREASFVLHTIG--KTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
K R E+ + MT T ++APEV R Y D+++ G++++ M G
Sbjct: 173 KQL-RAENGLLMTPCY-TANFVAPEVLKRQ----GYDEGCDIWSLGILLYTMLAG 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 382 EELSSTIG-IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNR 436
EE +S I I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA +
Sbjct: 115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HE 168
Query: 437 KESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
E + GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 51/202 (25%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 137
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPE-VFCRNIG 463
DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE + R
Sbjct: 138 DIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTTLCGTLDYLPPEXIEGRXHD 189
Query: 464 EVSYKSDVYNYGMMIFEMTGGR 485
E K D+++ G++ +E G+
Sbjct: 190 E---KVDLWSLGVLCYEFLVGK 208
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 48/205 (23%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLN--DSKGNGKEFINEVASISRTSHVNVVALLG--- 375
+G+G YG V++G G NVAVK+ + D K +E E+ + H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 376 ---------FCLRVAEELSS------------------TIGIARGLEYLHLGC-----ST 403
+ + E+ S + IA GL +LH+
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM--TGARGTVGYIAPEVFCRN 461
I H D+K NIL+ ++ I+D GLA + ++ + + + GT Y+APEV
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 462 IGEV----SYKS-DVYNYGMMIFEM 481
I +V SYK D++ +G++++E+
Sbjct: 193 I-QVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +GL+YLH S + +H DIK N+LL E K++DFG+A ++ I GT
Sbjct: 133 ILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGT 187
Query: 450 VGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGGR 485
++APEV I + +Y K+D+++ G+ E+ G
Sbjct: 188 PFWMAPEV----IKQSAYDSKADIWSLGITAIELARGE 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 48/205 (23%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLN--DSKGNGKEFINEVASISRTSHVNVVALLG--- 375
+G+G YG V++G G NVAVK+ + D K +E E+ + H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 376 ---------FCLRVAEELSS------------------TIGIARGLEYLHLGC-----ST 403
+ + E+ S + IA GL +LH+
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM--TGARGTVGYIAPEVFCRN 461
I H D+K NIL+ ++ I+D GLA + ++ + + + GT Y+APEV
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 462 IGEV----SYKS-DVYNYGMMIFEM 481
I +V SYK D++ +G++++E+
Sbjct: 193 I-QVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 49/203 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSNV----AVKVLNDSK--GNGKEFINEVAS---ISRTSHVNVV 371
LG+GGYG V++ + + G+N A+KVL + N K+ + A + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 372 ALL------GFCLRVAEELSS---------------------TIGIARGLEYLHLGCSTR 404
L+ G + E LS I+ L +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QKG 141
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPEVFCRN 461
I++ D+KP NI+L+ K++DFGL KESI T GT+ Y+APE+ R+
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLC-----KESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 462 IGEVSYKSDVYNYGMMIFEMTGG 484
+ D ++ G ++++M G
Sbjct: 197 GHNRAV--DWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 49/203 (24%)
Query: 321 LGQGGYGSVYKGKLLDGSNV----AVKVLNDSK--GNGKEFINEVAS---ISRTSHVNVV 371
LG+GGYG V++ + + G+N A+KVL + N K+ + A + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 372 ALL------GFCLRVAEELSS---------------------TIGIARGLEYLHLGCSTR 404
L+ G + E LS I+ L +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QKG 141
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPEVFCRN 461
I++ D+KP NI+L+ K++DFGL KESI T GT+ Y+APE+ R+
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLC-----KESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 462 IGEVSYKSDVYNYGMMIFEMTGG 484
+ D ++ G ++++M G
Sbjct: 197 GHNRAV--DWWSLGALMYDMLTG 217
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + ++ GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 129
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 130 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 182
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 183 -KVDLWSLGVLCYEFLVGK 200
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLA---KICNRKESIISMTGA 446
I G+ YLH S ILH D+ N+LL + KI+DFGLA K+ + K +
Sbjct: 121 IITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---- 173
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRK--NVDVVDN 493
GT YI+PE+ R+ + +SDV++ G M + + GR + D V N
Sbjct: 174 -GTPNYISPEIATRSAHGL--ESDVWSLGCMFYTLLIGRPPFDTDTVKN 219
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ K++DFGLAK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 382 EELSSTIG-IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNR 436
EE +S I I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA +
Sbjct: 115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HE 168
Query: 437 KESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
E + GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 379 RVAEELSSTIGIARGL-EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRK 437
+VA T I R L E + + I+H D+KP NILLD++ ++SDFG +
Sbjct: 194 KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG 253
Query: 438 ESIISMTGARGTVGYIAPEVFCRNIGEVS----YKSDVYNYGMMIFEMTGG 484
E + + GT GY+APE+ ++ E + D++ G+++F + G
Sbjct: 254 EKLRELC---GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 48/205 (23%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLN--DSKGNGKEFINEVASISRTSHVNVVALLG--- 375
+G+G YG V++G G NVAVK+ + D K +E E+ + H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 376 ---------FCLRVAEELSS------------------TIGIARGLEYLHL---GCSTR- 404
+ + E+ S + IA GL +LH+ G +
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 161
Query: 405 -ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM--TGARGTVGYIAPEVFCRN 461
I H D+K NIL+ ++ I+D GLA + ++ + + + GT Y+APEV
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 221
Query: 462 IGEV----SYKS-DVYNYGMMIFEM 481
I +V SYK D++ +G++++E+
Sbjct: 222 I-QVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 44/202 (21%)
Query: 322 GQGGYGSVYKGKLLD-GSNVAVK-VLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
GQG +G+V GK G +VA+K V+ D + +E + + ++ H N+V L +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 380 VAEELSSTIGIARGLEY----LH----------------------------LGC----ST 403
+ E I + +EY LH +GC S
Sbjct: 91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV 150
Query: 404 RILHFDIKPHNILLDE-DFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 462
+ H DIKPHN+L++E D K+ DFG AK + E ++ +R Y APE+ N
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YYRAPELIFGN- 206
Query: 463 GEVSYKSDVYNYGMMIFEMTGG 484
+ D+++ G + EM G
Sbjct: 207 QHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 380 VAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKE 438
+A+ L I G+ YLH S +H ++ N+LLD D KI DFGLAK + E
Sbjct: 116 LAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 439 SIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
V + APE C + Y SDV+++G+ ++E+
Sbjct: 173 YYRVREDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLYEL 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 162 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 214
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVVD 492
+ I SM + GT Y++PE S +SD+++ G+ + EM GR + D
Sbjct: 215 GQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPPPD 269
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
+LH D+KP N+ LD K+ DFGLA+I N S GT Y++PE R
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNR---- 190
Query: 465 VSY--KSDVYNYGMMIFEM 481
+SY KSD+++ G +++E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 49/201 (24%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 134
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+LL KI++FG S+ + + R GT+ Y+ PE+ + +
Sbjct: 135 DIKPENLLLGSAGELKIANFGW--------SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 186
Query: 465 VSYKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 187 E--KVDLWSLGVLCYEFLVGK 205
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S RI HFD+KP NI+L + P K+ DFG+A ++ E+
Sbjct: 124 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKN 177
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 178 IFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S RI HFD+KP NI+L + P K+ DFG+A ++ E+
Sbjct: 117 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKN 170
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 171 IFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 207
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ K++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S RI HFD+KP NI+L + P K+ DFG+A ++ E+
Sbjct: 138 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKN 191
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 192 IFGTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 228
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 43/199 (21%)
Query: 321 LGQGGYGSVYKGKLL-----DGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVVAL 373
LG+G +G V + G VAVK L G + E+ + H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 374 LGFC------------------------------LRVAEELSSTIGIARGLEYLHLGCST 403
G C + + ++L + I +G++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 133
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNI 462
+ +H D+ N+L++ + KI DFGL K + ++ R + V + APE C
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE--CLMQ 191
Query: 463 GEVSYKSDVYNYGMMIFEM 481
+ SDV+++G+ + E+
Sbjct: 192 SKFYIASDVWSFGVTLHEL 210
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ K++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ K++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ K++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 119 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 171
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I SM + GT Y++PE S +SD+++ G+ + EM GR
Sbjct: 172 GQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+DE +++DFG AK + + GT
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GT 188
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 189 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 221
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 43/199 (21%)
Query: 321 LGQGGYGSVYKGKLL-----DGSNVAVKVLNDSKGNGK--EFINEVASISRTSHVNVVAL 373
LG+G +G V + G VAVK L G + E+ + H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 374 LGFC------------------------------LRVAEELSSTIGIARGLEYLHLGCST 403
G C + + ++L + I +G++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 145
Query: 404 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEVFCRNI 462
+ +H D+ N+L++ + KI DFGL K + ++ R + V + APE C
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE--CLMQ 203
Query: 463 GEVSYKSDVYNYGMMIFEM 481
+ SDV+++G+ + E+
Sbjct: 204 SKFYIASDVWSFGVTLHEL 222
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 449
++YLH I+H D+KP N+LL +ED KI+DFG +KI + ++ GT
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 178
Query: 450 VGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
Y+APEV ++G Y D ++ G+++F
Sbjct: 179 PTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 127 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 179
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I SM + GT Y++PE S +SD+++ G+ + EM GR
Sbjct: 180 GQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 449
++YLH I+H D+KP N+LL +ED KI+DFG +KI + ++ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 179
Query: 450 VGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
Y+APEV ++G Y D ++ G+++F
Sbjct: 180 PTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 449
++YLH I+H D+KP N+LL +ED KI+DFG +KI + ++ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 179
Query: 450 VGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
Y+APEV ++G Y D ++ G+++F
Sbjct: 180 PTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 449
++YLH I+H D+KP N+LL +ED KI+DFG +KI + ++ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 179
Query: 450 VGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
Y+APEV ++G Y D ++ G+++F
Sbjct: 180 PTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 210
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S R++H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHR 135
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI++FG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 136 DIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDE- 188
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 189 -KVDLWSLGVLCYEFLVGK 206
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 449
++YLH I+H D+KP N+LL +ED KI+DFG +KI + ++ GT
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 185
Query: 450 VGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
Y+APEV ++G Y D ++ G+++F
Sbjct: 186 PTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 216
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 81/198 (40%), Gaps = 49/198 (24%)
Query: 312 KMTNSFKYKLGQGGYGSVYKGKL-LDGSNVAVKVLNDSKG-NGKEFINEVASISRTSHVN 369
+ T F LG G + V+ K L G A+K + S NE+A + + H N
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 370 VVAL-----------LGFCLRVAEELSSTI----------------GIARGLEYLHLGCS 402
+V L L L EL I + ++YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH---E 124
Query: 403 TRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF- 458
I+H D+KP N+L +E+ I+DFGL+K+ E M+ A GT GY+APEV
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLA 180
Query: 459 ---------CRNIGEVSY 467
C +IG ++Y
Sbjct: 181 QKPYSKAVDCWSIGVITY 198
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I L+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGT 315
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
Y+APEV N + D + G++++EM GR
Sbjct: 316 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I L+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGT 312
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
Y+APEV N + D + G++++EM GR
Sbjct: 313 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 49/205 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+GQG +G V+K + G VA+K + N+ +G + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 376 FCLRVAEELSSTIG-----------------------------------IARGLEYLHLG 400
C A + G + GL Y+H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH-- 142
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGAR-GTVGYIAPEVF 458
+ILH D+K N+L+ D K++DFGLA+ + K S + R T+ Y PE+
Sbjct: 143 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 459 CRNIGEVSYKS--DVYNYGMMIFEM 481
+GE Y D++ G ++ EM
Sbjct: 202 ---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFC---PKISDFGLAK----ICNRKESIIS 442
I G+ YLH I+H D+KP NILL + KI DFG+++ C +E +
Sbjct: 140 ILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM-- 194
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVVDNGSTALDL 500
GT Y+APE+ N ++ +D++N G++ + + DN T L++
Sbjct: 195 -----GTPEYLAPEIL--NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI 245
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 152
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I SM + GT Y++PE S +SD+++ G+ + EM GR
Sbjct: 153 GQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 380 VAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKE 438
+A+ L I G+ YLH + +H ++ N+LLD D KI DFGLAK + E
Sbjct: 116 LAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 439 SIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
V + APE C + Y SDV+++G+ ++E+
Sbjct: 173 YYRVREDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I L+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGT 174
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
Y+APEV N + D + G++++EM GR
Sbjct: 175 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I L+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGT 172
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
Y+APEV N + D + G++++EM GR
Sbjct: 173 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ +++DFGLAK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 152
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I SM + GT Y++PE S +SD+++ G+ + EM GR
Sbjct: 153 GQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 152
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I SM + GT Y++PE S +SD+++ G+ + EM GR
Sbjct: 153 GQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKES--IISMT 444
T + L+ +H S ++H D+KP N+LLD+ K++DFG C + + ++
Sbjct: 180 TAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFG---TCMKMDETGMVHCD 233
Query: 445 GARGTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGG 484
A GT YI+PEV G+ Y + D ++ G+ +FEM G
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 449
++YLH I+H D+KP N+LL +ED KI+DFG +KI + ++ GT
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 318
Query: 450 VGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
Y+APEV ++G Y D ++ G+++F
Sbjct: 319 PTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 349
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I L+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGT 173
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
Y+APEV N + D + G++++EM GR
Sbjct: 174 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 45/199 (22%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY K + V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 376 F------------------CLRVAEELSS---------TIGIARGLEYLHLGCSTRILHF 408
+ R ++LS +A L Y H S +++H
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKKVIHR 132
Query: 409 DIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+ + +
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEMIEGRMHDE- 185
Query: 467 YKSDVYNYGMMIFEMTGGR 485
K D+++ G++ +E G+
Sbjct: 186 -KVDLWSLGVLCYEFLVGK 203
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 449
++YLH I+H D+KP N+LL +ED KI+DFG +KI + ++ GT
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GT 304
Query: 450 VGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
Y+APEV ++G Y D ++ G+++F
Sbjct: 305 PTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 335
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ K++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ K++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPAFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ K++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ K++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ K++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 152
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I SM + GT Y++PE S +SD+++ G+ + EM GR
Sbjct: 153 GQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 152
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I SM + GT Y++PE S +SD+++ G+ + EM GR
Sbjct: 153 GQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ K++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G+++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G+++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 49/205 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+GQG +G V+K + G VA+K + N+ +G + E+ + H NVV L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 376 FCLRVAEELSSTIG-----------------------------------IARGLEYLHLG 400
C A + G + GL Y+H
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH-- 141
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGAR-GTVGYIAPEVF 458
+ILH D+K N+L+ D K++DFGLA+ + K S + R T+ Y PE+
Sbjct: 142 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 200
Query: 459 CRNIGEVSYKS--DVYNYGMMIFEM 481
+GE Y D++ G ++ EM
Sbjct: 201 ---LGERDYGPPIDLWGAGCIMAEM 222
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 49/205 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+GQG +G V+K + G VA+K + N+ +G + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 376 FCLRVAEELSSTIG-----------------------------------IARGLEYLHLG 400
C A + G + GL Y+H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH-- 142
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGAR-GTVGYIAPEVF 458
+ILH D+K N+L+ D K++DFGLA+ + K S + R T+ Y PE+
Sbjct: 143 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 459 CRNIGEVSYKS--DVYNYGMMIFEM 481
+GE Y D++ G ++ EM
Sbjct: 202 ---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 222
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 223 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 255
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 42/203 (20%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVV--------- 371
+G+G YG V++G L G +VAVK+ + E+ + H N++
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 372 -----------------ALLGFCLRVAEE----LSSTIGIARGLEYLHLGC-----STRI 405
+L F R E L + A GL +LH+ I
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAI 134
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM--TGARGTVGYIAPEVFCRNIG 463
H D K N+L+ + I+D GLA + ++ + + GT Y+APEV I
Sbjct: 135 AHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIR 194
Query: 464 E---VSYK-SDVYNYGMMIFEMT 482
SYK +D++ +G++++E+
Sbjct: 195 TDCFESYKWTDIWAFGLVLWEIA 217
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 42/210 (20%)
Query: 314 TNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVAL 373
T + +G+G +G V++GK G VAVK+ + + E+ H N++
Sbjct: 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 101
Query: 374 LG------------------------------FCLRVAEELSSTIGIARGLEYLHL---G 400
+ + + V + + A GL +LH+ G
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 401 CSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR--GTVGYIAPE 456
+ I H D+K NIL+ ++ I+D GLA + I + GT Y+APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 457 VFCRNIGEVSYKS----DVYNYGMMIFEMT 482
V +I ++S D+Y G++ +E+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 145 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 196
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 197 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 229
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 194
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 195 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 227
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 136 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GT 187
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 188 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 203 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 49/205 (23%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVALLG 375
K+GQG +G V+K + G VA+K + N+ +G + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 376 FCLRVA------------------EELSSTIG-----------------IARGLEYLHLG 400
C A +L+ + + GL Y+H
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH-- 142
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGAR-GTVGYIAPEVF 458
+ILH D+K N+L+ D K++DFGLA+ + K S + R T+ Y PE+
Sbjct: 143 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 459 CRNIGEVSYKS--DVYNYGMMIFEM 481
+GE Y D++ G ++ EM
Sbjct: 202 ---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 222
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 223 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 255
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 194
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 195 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 227
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 389 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG 448
+ Y+H I H D+KP NIL+D++ K+SDFG ++ K+ + G+RG
Sbjct: 159 SVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK----IKGSRG 212
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
T ++ PE F K D+++ G+ ++ M
Sbjct: 213 TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 318 KYKLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-SHVNVVAL 373
K +LG+G + V + G A K++N K + ++F + A I R H N+V L
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 374 -----------LGFCLRVAEELSSTIG-------------IARGLEYLHLGCSTRILHFD 409
L F L EL I I + LE + S I+H +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 410 IKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP N+LL + K++DFGLA N E+ G GT GY++PEV ++ S
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD--PYS 185
Query: 467 YKSDVYNYGMMIFEMTGG 484
D++ G++++ + G
Sbjct: 186 KPVDIWACGVILYILLVG 203
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 42/203 (20%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG----- 375
+G+G +G V++GK G VAVK+ + + E+ H N++ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 376 -------------------------FCLRVAEELSSTIGIARGLEYLHL---GCSTR--I 405
+ + V + + A GL +LH+ G + I
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 130
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR--GTVGYIAPEVFCRNIG 463
H D+K NIL+ ++ I+D GLA + I + GT Y+APEV +I
Sbjct: 131 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 190
Query: 464 EVSYKS----DVYNYGMMIFEMT 482
++S D+Y G++ +E+
Sbjct: 191 MKHFESFKRADIYAMGLVFWEIA 213
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNIL-LDEDFCP---KISDFGLAKICNRKESIISMTG 445
I + +EYLH + ++H D+KP NIL +DE P +I DFG AK R E+ + MT
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTP 180
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
T ++APEV R + + D+++ G++++ M G
Sbjct: 181 CY-TANFVAPEVLERQGYDAA--CDIWSLGVLLYTMLTG 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 42/210 (20%)
Query: 314 TNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVAL 373
T + +G+G +G V++GK G VAVK+ + + E+ H N++
Sbjct: 30 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 88
Query: 374 LG------------------------------FCLRVAEELSSTIGIARGLEYLHL---G 400
+ + + V + + A GL +LH+ G
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 401 CSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR--GTVGYIAPE 456
+ I H D+K NIL+ ++ I+D GLA + I + GT Y+APE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 457 VFCRNIGEVSYKS----DVYNYGMMIFEMT 482
V +I ++S D+Y G++ +E+
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 318 KYKLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-SHVNVVAL 373
K +LG+G + V + G A K++N K + ++F + A I R H N+V L
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 374 -----------LGFCLRVAEELSSTIG-------------IARGLEYLHLGCSTRILHFD 409
L F L EL I I + LE + S I+H +
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 129
Query: 410 IKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP N+LL + K++DFGLA N E+ G GT GY++PEV ++ S
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD--PYS 184
Query: 467 YKSDVYNYGMMIFEMTGG 484
D++ G++++ + G
Sbjct: 185 KPVDIWACGVILYILLVG 202
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 42/203 (20%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG----- 375
+G+G +G V++GK G VAVK+ + + E+ H N++ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 376 -------------------------FCLRVAEELSSTIGIARGLEYLHL---GCSTR--I 405
+ + V + + A GL +LH+ G + I
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR--GTVGYIAPEVFCRNIG 463
H D+K NIL+ ++ I+D GLA + I + GT Y+APEV +I
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 189
Query: 464 EVSYKS----DVYNYGMMIFEMT 482
++S D+Y G++ +E+
Sbjct: 190 MKHFESFKRADIYAMGLVFWEIA 212
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 318 KYKLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-SHVNVVAL 373
K +LG+G + V + G A K++N K + ++F + A I R H N+V L
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 374 -----------LGFCLRVAEELSSTIG-------------IARGLEYLHLGCSTRILHFD 409
L F L EL I I + LE + S I+H +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 410 IKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP N+LL + K++DFGLA N E+ G GT GY++PEV ++ S
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD--PYS 185
Query: 467 YKSDVYNYGMMIFEMTGG 484
D++ G++++ + G
Sbjct: 186 KPVDIWACGVILYILLVG 203
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-- 447
I+ GL +LH I++ D+K N++LD + KI+DFG+ KE ++ R
Sbjct: 129 ISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMC-----KEHMMDGVTTREF 180
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVDVVDN 493
GT YIAPE+ D + YG++++EM G+ D D
Sbjct: 181 CGTPDYIAPEIIAYQ--PYGKSVDWWAYGVLLYEMLAGQPPFDGEDE 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 36/198 (18%)
Query: 318 KYKLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-SHVNVVAL 373
K +LG+G + V + G A K++N K + ++F + A I R H N+V L
Sbjct: 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 374 -----------LGFCLRVAEELSSTIG-------------IARGLEYLHLGCSTRILHFD 409
L F L EL I I + LE + S I+H +
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 153
Query: 410 IKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+KP N+LL + K++DFGLA N E+ G GT GY++PEV ++ S
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKD--PYS 208
Query: 467 YKSDVYNYGMMIFEMTGG 484
D++ G++++ + G
Sbjct: 209 KPVDIWACGVILYILLVG 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 42/203 (20%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG----- 375
+G+G +G V++GK G VAVK+ + + E+ H N++ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 376 -------------------------FCLRVAEELSSTIGIARGLEYLHL---GCSTR--I 405
+ + V + + A GL +LH+ G + I
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 132
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR--GTVGYIAPEVFCRNIG 463
H D+K NIL+ ++ I+D GLA + I + GT Y+APEV +I
Sbjct: 133 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 192
Query: 464 EVSYKS----DVYNYGMMIFEMT 482
++S D+Y G++ +E+
Sbjct: 193 MKHFESFKRADIYAMGLVFWEIA 215
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 42/203 (20%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG----- 375
+G+G +G V++GK G VAVK+ + + E+ H N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 376 -------------------------FCLRVAEELSSTIGIARGLEYLHL---GCSTR--I 405
+ + V + + A GL +LH+ G + I
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 135
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR--GTVGYIAPEVFCRNIG 463
H D+K NIL+ ++ I+D GLA + I + GT Y+APEV +I
Sbjct: 136 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 195
Query: 464 EVSYKS----DVYNYGMMIFEMT 482
++S D+Y G++ +E+
Sbjct: 196 MKHFESFKRADIYAMGLVFWEIA 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 72/179 (40%), Gaps = 44/179 (24%)
Query: 321 LGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGNGKEFIN---------EVASISRTSHVNV 370
LG G +G V+ + V VK + K +I E+A +SR H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 371 VALL------GFCL--------------------RVAEELSSTI--GIARGLEYLHLGCS 402
+ +L GF R+ E L+S I + + YL L
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL--- 148
Query: 403 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 461
I+H DIK NI++ EDF K+ DFG A R + + GT+ Y APEV N
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAPEVLMGN 204
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
+EY H +I+H D+KP N+LLD++ KI+DFGL+ I + + G+ Y
Sbjct: 120 AIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN---FLKTSCGSPNY 173
Query: 453 IAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
APEV + + DV++ G++++ M GR D
Sbjct: 174 AAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 103/238 (43%), Gaps = 48/238 (20%)
Query: 304 RYGYADIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVL---NDSKGNGKEFINEVA 360
++ D K++ +F KL + G ++KG+ G+++ VKVL + S ++F E
Sbjct: 3 KHSGIDFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 361 SISRTSHVNVVALLG-------------------------------FCLRVAEELSSTIG 389
+ SH NV+ +LG F + ++ + +
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALD 119
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
+ARG+ +LH I + ++++DED +IS + + K S S G
Sbjct: 120 MARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQS-PGRMYA 171
Query: 450 VGYIAPEVFCRNIGEVSYKS-DVYNYGMMIFEMTGGRKNVDVVDNGSTALDLQASRKG 506
++APE + + + +S D++++ ++++E+ + V D + + ++ + +G
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGMKVALEG 227
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 122 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 177
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 178 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 122 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 177
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 178 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 18/99 (18%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-- 447
I EYLH S +++ D+KP N+L+D+ +++DFG AK + GA
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------RVKGATWT 218
Query: 448 --GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT Y+APE+ + D + G++I+EM G
Sbjct: 219 LCGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 255
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 48/211 (22%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAV--KVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCL 378
LG+G +G K + V V +++ + + F+ EV + H NV+ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 379 R----------------------------VAEELSSTIGIARGLEYLHLGCSTRILHFDI 410
+ ++ +S IA G+ YLH S I+H D+
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDL 134
Query: 411 KPHNILLDEDFCPKISDFGLAKIC----NRKESIISMTGAR--------GTVGYIAPEVF 458
HN L+ E+ ++DFGLA++ + E + S+ G ++APE+
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 459 CRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
N K DV+++G+++ E+ GR N D
Sbjct: 195 --NGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+++D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I+EM G
Sbjct: 202 PEYLAPEIIISK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 38/195 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGF 376
+G+G + V + +L G VA+K+++ ++ N ++ EV + +H N+V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 377 C---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
++ E S I ++Y H RI+H D
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRD 136
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+K N+LLD D KI+DFG + + + G+ Y APE+F + +
Sbjct: 137 LKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAAPELFQGKKYD-GPEV 192
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 193 DVWSLGVILYTLVSG 207
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTG 445
I G+ YLH S +I HFD+KP NI+L + P KI DFGLA + ++
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF- 178
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APE+ N + ++D+++ G++ + + G
Sbjct: 179 --GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+APE+ + D + G++I++M G
Sbjct: 202 PEYLAPEIILSK--GYNKAVDWWALGVLIYQMAAG 234
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 52/219 (23%)
Query: 310 IKKMTNSFKYKLGQGGYGSVYKGKLL------DGSNVAVKVLNDSKGNG-KEFINEVASI 362
IK+ K +LG+G +G V+ + D VAVK L D+ N K+F E +
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 363 SRTSHVNVVALLGFC----------------------------------------LRVAE 382
+ H ++V G C L ++
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 383 ELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS 442
L IA G+ YL S +H D+ N L+ E+ KI DFG+++ +
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 443 MTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++ PE + + +SDV++ G++++E+
Sbjct: 187 GGHTMLPIRWMPPESIMYR--KFTTESDVWSLGVVLWEI 223
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
H D+KP NIL+ D + DFG+A E + + GT+ Y APE F + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT-DEKLTQLGNTVGTLYYXAPERFSES--HAT 213
Query: 467 YKSDVYNYGMMIFE-MTG 483
Y++D+Y +++E +TG
Sbjct: 214 YRADIYALTCVLYECLTG 231
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNI 462
I+H D+KP NILLD+D K++DFG + + E + S+ GT Y+APE+ N
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC---GTPSYLAPEIIECSMND 201
Query: 463 GEVSY--KSDVYNYGMMIFEMTGG 484
Y + D+++ G++++ + G
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 43/202 (21%)
Query: 321 LGQGGYGSVYKGKLLDGSNVAVKVLNDSKG-------NGKEFIN-EVASISRTSHVNVVA 372
LG+G YG V ++LD + + + K NG+ + E+ + R H NV+
Sbjct: 13 LGEGSYGKV--KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 373 L---------------LGFCLRVAEELSSTIGIAR---------------GLEYLHLGCS 402
L + +C+ +E+ ++ R GLEYLH S
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---S 127
Query: 403 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 462
I+H DIKP N+LL KIS G+A+ + + + ++G+ + PE+
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD 187
Query: 463 GEVSYKSDVYNYGMMIFEMTGG 484
+K D+++ G+ ++ +T G
Sbjct: 188 TFSGFKVDIWSAGVTLYNITTG 209
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 34/144 (23%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVA----VKVLNDSKGNGKEFINEVASISRTSHVNVVAL-- 373
K+G+G YG+V+K K + + V++ +D +G + E+ + H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 374 -----------LGFCLRVAEEL--------------SSTIGIARGLEYLHLGCSTRILHF 408
FC + ++ S + +GL + H S +LH
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 409 DIKPHNILLDEDFCPKISDFGLAK 432
D+KP N+L++ + K++DFGLA+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLAR 149
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGF 376
+G+G + V + +L G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 377 C---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
++ E + I ++Y H I+H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHRD 138
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+K N+LLD D KI+DFG + + + GA Y APE+F + +
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP---PYAAPELFQGKKYD-GPEV 194
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 195 DVWSLGVILYTLVSG 209
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 320 KLGQGGYGSVYKGKLLD-GSNVAVKVLNDSKGN---GKEFINEVASISRTSHVNVVALLG 375
K+G+G YG V+K + D G VA+K +S+ + K + E+ + + H N+V LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 376 FCLR-------------------------VAEELSSTIGIARGLEYLHLGCSTRILHFDI 410
R V E L +I + L+ ++ +H D+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSI-TWQTLQAVNFCHKHNCIHRDV 128
Query: 411 KPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY--K 468
KP NIL+ + K+ DFG A++ A T Y +PE+ +G+ Y
Sbjct: 129 KPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA--TRWYRSPELL---VGDTQYGPP 183
Query: 469 SDVYNYGMMIFEMTGG 484
DV+ G + E+ G
Sbjct: 184 VDVWAIGCVFAELLSG 199
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +EY H +I+H D+KP N+LLDE KI+DFGL+ I + + G+
Sbjct: 121 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGS 174
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
Y APEV + + DV++ G++++ M
Sbjct: 175 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVM 205
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 379 RVAEELSSTIGIA--RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 436
R+ E++ + IA +GL YL +I+H D+KP NIL++ K+ DFG++
Sbjct: 103 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----- 155
Query: 437 KESIISMTGA-RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
+ I M GT Y++PE S +SD+++ G+ + EM GR
Sbjct: 156 GQLIDEMANEFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +EY H +I+H D+KP N+LLDE KI+DFGL+ I + + G+
Sbjct: 122 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGS 175
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
Y APEV + + DV++ G++++ M
Sbjct: 176 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVM 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +EY H +I+H D+KP N+LLDE KI+DFGL+ I + + G+
Sbjct: 116 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGS 169
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
Y APEV + + DV++ G++++ M
Sbjct: 170 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVM 200
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I +EY H +I+H D+KP N+LLDE KI+DFGL+ I + + G+
Sbjct: 112 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGS 165
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKNVD 489
Y APEV + + DV++ G++++ M R D
Sbjct: 166 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 43/202 (21%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVLNDSKGNGKEFIN-------EVASISRTS----HV 368
LG+GG+G+V+ G +L D VA+KV+ ++ G ++ EVA + + H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 369 NVVALL-------GFCLRVAEELSSTIGIARGLEYLHLG-----------------CSTR 404
V+ LL GF L + L + E LG C +R
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR 158
Query: 405 -ILHFDIKPHNILLD-EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 462
++H DIK NIL+D C K+ DFG + + + T GT Y PE R+
Sbjct: 159 GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQ 214
Query: 463 GEVSYKSDVYNYGMMIFEMTGG 484
+ + V++ G+++++M G
Sbjct: 215 YH-ALPATVWSLGILLYDMVCG 235
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 345 LNDSKGNGKEFINEVASISRTSHVNVVALLGFCLRVAEELSSTIGIARGLEYLHLGCSTR 404
L+D+ + E + + +S + +A + + AE ++ GL+++H
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHS 169
Query: 405 ILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 462
I+H DIKP NI+ + KI DFGLA N E I+ +T A T + APE+ R
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTA--TAEFAAPEIVDRE- 225
Query: 463 GEVSYKSDVYNYGMMIFEMTGG 484
V + +D++ G++ + + G
Sbjct: 226 -PVGFYTDMWAIGVLGYVLLSG 246
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 335 LDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVAL-----LGFCLRVAEELSS--- 386
LD N+ VKV +G + ++V S++ + V +V L L L
Sbjct: 65 LDHDNI-VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHAR 123
Query: 387 --TIGIARGLEYLHLGCSTRILHFDIKPHNILLD-EDFCPKISDFGLAKICN 435
+ RGL+Y+H S +LH D+KP N+ ++ ED KI DFGLA+I +
Sbjct: 124 LFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD 172
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ I + LE+LH S ++H D+KP N+L++ K+ DFG++ ++ T
Sbjct: 159 AVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTID 213
Query: 447 RGTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMT 482
G Y+APE + + Y KSD+++ G+ + E+
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 192
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 193 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 39/196 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFI----NEVASISRTSHVNVVALL- 374
LG G +G V G+ L G VAVK+LN K + + E+ ++ H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 375 ------GFCL------------------RVAEELSSTI--GIARGLEYLHLGCSTRILHF 408
F + RV E + + I ++Y H ++H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHR 135
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
D+KP N+LLD KI+DFGL+ + + E + + + G+ Y APEV + +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEVISGRL-YAGPE 191
Query: 469 SDVYNYGMMIFEMTGG 484
D+++ G++++ + G
Sbjct: 192 VDIWSCGVILYALLCG 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
Y+AP + + D + G++I+EM G
Sbjct: 202 PEYLAPAIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 39/196 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNGKEFI----NEVASISRTSHVNVVALL- 374
LG G +G V G+ L G VAVK+LN K + + E+ ++ H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 375 ------GFCL------------------RVAEELSSTI--GIARGLEYLHLGCSTRILHF 408
F + RV E + + I ++Y H ++H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHR 135
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYK 468
D+KP N+LLD KI+DFGL+ + + E + + G+ Y APEV + +
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRL-YAGPE 191
Query: 469 SDVYNYGMMIFEMTGG 484
D+++ G++++ + G
Sbjct: 192 VDIWSCGVILYALLCG 207
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLGFCLR 379
++G+G YG V+ GK G VAVKV ++ E+ H N++ + ++
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 380 -------------------VAEELSSTIGIAR-----------GLEYLHLGC-STR---- 404
+ + L ST A+ GL +LH ST+
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA 162
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAK--ICNRKESIISMTGARGTVGYIAPEVFCRNI 462
I H D+K NIL+ ++ I+D GLA I + E I GT Y+ PEV ++
Sbjct: 163 IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL 222
Query: 463 GEVSYKS----DVYNYGMMIFEMT 482
++S D+Y++G++++E+
Sbjct: 223 NRNHFQSYIMADMYSFGLILWEVA 246
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
IA L YLH S I++ D+KP NILLD ++DFGL K S S GT
Sbjct: 148 IASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC--GT 202
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG------RKNVDVVDN 493
Y+APEV + + + D + G +++EM G R ++ DN
Sbjct: 203 PEYLAPEVLHKQPYDRTV--DWWCLGAVLYEMLYGLPPFYSRNTAEMYDN 250
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 68/229 (29%)
Query: 292 TFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSV---YKGKLLDGSNVAVKVLN-- 346
T L+ Y++L P +G G G V Y L NVA+K L+
Sbjct: 21 TVLKRYQNLKP------------------IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP 60
Query: 347 -DSKGNGKEFINEVASISRTSHVNVVALLGFCL--RVAEELSSTIGIAR----------- 392
++ + K E+ + +H N+++LL + EE +
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 120
Query: 393 -----------------GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN 435
G+++LH S I+H D+KP NI++ D KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
Query: 436 RKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
+ MT T Y APEV I + YK D+++ G ++ EM
Sbjct: 178 ---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ ++ R Y
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YY 193
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
APEV I + YK D+++ G ++ EM G
Sbjct: 194 RAPEV----ILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGF 376
+G+G + V + +L G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 377 C---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
++ E + I ++Y H I+H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHRD 138
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+K N+LLD D KI+DFG + + + G+ Y APE+F + +
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYD-GPEV 194
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 195 DVWSLGVILYTLVSG 209
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 68/229 (29%)
Query: 292 TFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSV---YKGKLLDGSNVAVKVLN-- 346
T L+ Y++L P +G G G V Y L NVA+K L+
Sbjct: 21 TVLKRYQNLKP------------------IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP 60
Query: 347 -DSKGNGKEFINEVASISRTSHVNVVALLGFCL--RVAEELSSTIGIAR----------- 392
++ + K E+ + +H N+++LL + EE +
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ 120
Query: 393 -----------------GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN 435
G+++LH S I+H D+KP NI++ D KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
Query: 436 RKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
+ MT T Y APEV I + YK D+++ G ++ EM
Sbjct: 178 ---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 45/199 (22%)
Query: 320 KLGQGGYGSVYKG-KLLDGSNVAVKVL---NDSKGNGKEFINEVASISRTSHVNVVAL-- 373
KLG+G YG VYK + VA+K + ++ +G I EV+ + H N++ L
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 374 -------LGFCLRVAE-----------ELSSTI------GIARGLEYLHLGCSTRILHFD 409
L AE ++S + + G+ + H S R LH D
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRD 157
Query: 410 IKPHNILL---DEDFCP--KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGE 464
+KP N+LL D P KI DFGLA+ I T T+ Y PE+ +G
Sbjct: 158 LKPQNLLLSVSDASETPVLKIGDFGLARAFGI--PIRQFTHEIITLWYRPPEIL---LGS 212
Query: 465 VSYKS--DVYNYGMMIFEM 481
Y + D+++ + EM
Sbjct: 213 RHYSTSVDIWSIACIWAEM 231
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNI 462
I+H D+KP NILLD+D K++DFG + + E + + GT Y+APE+ N
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEIIECSMND 201
Query: 463 GEVSY--KSDVYNYGMMIFEMTGG 484
Y + D+++ G++++ + G
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGF 376
+G+G + V + +L G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 377 C---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
++ E + I ++Y H I+H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHRD 138
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+K N+LLD D KI+DFG + + + G+ Y APE+F + +
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYD-GPEV 194
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 195 DVWSLGVILYTLVSG 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 405 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNI 462
I+H D+KP NILLD+D K++DFG + + E + + GT Y+APE+ N
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEIIECSMND 188
Query: 463 GEVSY--KSDVYNYGMMIFEMTGG 484
Y + D+++ G++++ + G
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 68/229 (29%)
Query: 292 TFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSV---YKGKLLDGSNVAVKVLN-- 346
T L+ Y++L P +G G G V Y L NVA+K L+
Sbjct: 21 TVLKRYQNLKP------------------IGSGAQGIVCAAYDAVL--DRNVAIKKLSRP 60
Query: 347 -DSKGNGKEFINEVASISRTSHVNVVALLGFCL--RVAEELSSTIGIAR----------- 392
++ + K E+ + +H N+++LL + EE +
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ 120
Query: 393 -----------------GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN 435
G+++LH S I+H D+KP NI++ D KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
Query: 436 RKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
+ MT T Y APEV I + YK D+++ G ++ EM
Sbjct: 178 ---TSFMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 68/244 (27%)
Query: 292 TFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKG-KLLDGSNVAVKVLN---D 347
T L+ Y+ L P +G G G V + G NVAVK L+
Sbjct: 19 TVLKRYQQLKP------------------IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ 60
Query: 348 SKGNGKEFINEVASISRTSHVNVVALLGFCL--RVAEELSSTIGIAR------------- 392
++ + K E+ + +H N+++LL + EE +
Sbjct: 61 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME 120
Query: 393 ---------------GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRK 437
G+++LH S I+H D+KP NI++ D KI DFGLA+ +
Sbjct: 121 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
Query: 438 ESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGGRKNVDVVDNGS 495
MT T Y APEV I + YK D+++ G ++ E+ G V+ G+
Sbjct: 178 ---FMMTPYVVTRYYRAPEV----ILGMGYKENVDIWSVGCIMGELVKG----SVIFQGT 226
Query: 496 TALD 499
+D
Sbjct: 227 DHID 230
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 37/146 (25%)
Query: 320 KLGQGGYGSVYKG-KLLDGSNVAVKVLNDSKGN---GKEFINEVASISRTS-HVNVVALL 374
KLG+G YG V+K G VAVK + D+ N + E+ ++ S H N+V LL
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 375 GFCLR-------------VAEELSSTI---------------GIARGLEYLHLGCSTRIL 406
LR + +L + I + + ++YLH G +L
Sbjct: 76 N-VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LL 131
Query: 407 HFDIKPHNILLDEDFCPKISDFGLAK 432
H D+KP NILL+ + K++DFGL++
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 320 KLGQGGYGSVYKGKLLDGSN-VAVKVLNDSKGNGKEFINEVASISRTSHVNVVAL----- 373
+LG+G VY+ K A+KVL + + K E+ + R SH N++ L
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 374 ------LGFCLRVAEELSSTI----------------GIARGLEYLHLGCSTRILHFDIK 411
L L EL I I + YLH I+H D+K
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLK 175
Query: 412 PHNILLDE---DFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--CRNIGEVS 466
P N+L D KI+DFGL+KI + + M GT GY APE+ C EV
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYGPEV- 231
Query: 467 YKSDVYNYGMMIFEMTGG 484
D+++ G++ + + G
Sbjct: 232 ---DMWSVGIITYILLCG 246
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGF 376
+G+G + V + +L G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 377 C---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
++ E + I ++Y H I+H D
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCH---QKFIVHRD 131
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+K N+LLD D KI+DFG + + + G+ Y APE+F + +
Sbjct: 132 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP---PYAAPELFQGKKYD-GPEV 187
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 188 DVWSLGVILYTLVSG 202
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYY 184
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 185 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 64/220 (29%)
Query: 321 LGQGGYGSVYKGK---LLDG---SNVAVKVLND--SKGNGKEFINEVASISRTSHVNVVA 372
+G+G +G V++ + LL + VAVK+L + S +F E A ++ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 373 LLGFC---------------------------------------------------LRVA 381
LLG C L A
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 382 EELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 441
E+L +A G+ YL + +H D+ N L+ E+ KI+DFGL++ +
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 442 SMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ + ++ PE N + +SDV+ YG++++E+
Sbjct: 232 ADGNDAIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEI 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 44/198 (22%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGF 376
+G+G + V + +L G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 377 C---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
++ E + I ++Y H I+H D
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKYIVHRD 139
Query: 410 IKPHNILLDEDFCPKISDFGLA---KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 466
+K N+LLD D KI+DFG + + N+ ++ G+ Y APE+F +
Sbjct: 140 LKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC------GSPPYAAPELFQGKKYD-G 192
Query: 467 YKSDVYNYGMMIFEMTGG 484
+ DV++ G++++ + G
Sbjct: 193 PEVDVWSLGVILYTLVSG 210
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 449
I EYLH S +++ D+KP N+L+D+ +++DFG AK + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+APE+ + D + G++I+EM G
Sbjct: 202 PEALAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 34/144 (23%)
Query: 320 KLGQGGYGSVYKGKLLDGSNVA----VKVLNDSKGNGKEFINEVASISRTSHVNVVAL-- 373
K+G+G YG+V+K K + + V++ +D +G + E+ + H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 374 -----------LGFCLRVAEEL--------------SSTIGIARGLEYLHLGCSTRILHF 408
FC + ++ S + +GL + H S +LH
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 409 DIKPHNILLDEDFCPKISDFGLAK 432
D+KP N+L++ + K+++FGLA+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLAR 149
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 37/195 (18%)
Query: 321 LGQGGYGSVYKG-KLLDGSNVAVKVL--NDSKGNGKEFINEVASISRTSHVNVVAL---- 373
+G GG+ V +L G VA+K++ N + E+ ++ H ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 374 ---------LGFCL------------RVAEELSSTI--GIARGLEYLHLGCSTRILHFDI 410
L +C R++EE + + I + Y+H S H D+
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDL 134
Query: 411 KPHNILLDEDFCPKISDFGL-AKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
KP N+L DE K+ DFGL AK K+ + G++ Y APE+ + + ++
Sbjct: 135 KPENLLFDEYHKLKLIDFGLCAKPKGNKD--YHLQTCCGSLAYAAPELI-QGKSYLGSEA 191
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 192 DVWSMGILLYVLMCG 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-- 447
IA GL +L S I++ D+K N++LD + KI+DFG+ KE+I +
Sbjct: 451 IAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC-----KENIWDGVTTKXF 502
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT YIAPE+ D + +G++++EM G+
Sbjct: 503 CGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 229
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 230 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGF 376
+G+G + V + +L G VAV++++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 377 C---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
++ E + I ++Y H I+H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHRD 138
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+K N+LLD D KI+DFG + + + G+ Y APE+F + +
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYD-GPEV 194
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 195 DVWSLGVILYTLVSG 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 103/253 (40%), Gaps = 65/253 (25%)
Query: 310 IKKMTNSFKYKLGQGGYGSVYKGK---LL---DGSNVAVKVLNDSKGNGKE-FINEVASI 362
IK+ K++LG+G +G V+ + LL D VAVK L ++ + ++ F E +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 363 SRTSHVNVVALLGFC------------------------------------------LRV 380
+ H ++V G C L +
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 381 AEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 440
+ L+ +A G+ YL +H D+ N L+ + KI DFG+++ + +
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTD 189
Query: 441 ISMTGARGT--VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGRK------NVDVV 491
G R + ++ PE + + +SDV+++G++++E+ T G++ N + +
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYR--KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 247
Query: 492 DNGSTALDLQASR 504
D + +L+ R
Sbjct: 248 DCITQGRELERPR 260
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 229
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 230 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 103/253 (40%), Gaps = 65/253 (25%)
Query: 310 IKKMTNSFKYKLGQGGYGSVYKGK---LL---DGSNVAVKVLNDSKGNGKE-FINEVASI 362
IK+ K++LG+G +G V+ + LL D VAVK L ++ + ++ F E +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 363 SRTSHVNVVALLGFC------------------------------------------LRV 380
+ H ++V G C L +
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 381 AEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 440
+ L+ +A G+ YL +H D+ N L+ + KI DFG+++ + +
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTD 183
Query: 441 ISMTGARGT--VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGRK------NVDVV 491
G R + ++ PE + + +SDV+++G++++E+ T G++ N + +
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYR--KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 241
Query: 492 DNGSTALDLQASR 504
D + +L+ R
Sbjct: 242 DCITQGRELERPR 254
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 157 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 212 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 254
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-- 447
IA GL +L S I++ D+K N++LD + KI+DFG+ KE+I +
Sbjct: 130 IAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC-----KENIWDGVTTKXF 181
Query: 448 -GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGR 485
GT YIAPE+ D + +G++++EM G+
Sbjct: 182 CGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 190
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 191 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 119 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 174 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 192
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 193 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 192
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 193 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 117 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 172 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 214
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 163 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 217
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 218 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 260
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 38/195 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLG- 375
+G+G + V + +L G VAVK+++ ++ N ++ EV +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 376 -------------------FCLRVA-------EELSSTIGIARGLEYLHLGCSTRILHFD 409
F VA E + I ++Y H I+H D
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH---QKFIVHRD 138
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+K N+LLD D KI+DFG + + + GA Y APE+F + +
Sbjct: 139 LKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGA---PPYAAPELFQGKKYD-GPEV 194
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 195 DVWSLGVILYTLVSG 209
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 112 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
K S S+T T Y+APEV +G Y D+++ G++++ + G
Sbjct: 167 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 184
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 185 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 185
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 186 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 111 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 166 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 208
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 118 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 173 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 215
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 113 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 168 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 210
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 185
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 186 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 127 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 182 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 47/219 (21%)
Query: 307 YADIKKMTNSFKYKLGQGGYGSVYKG-KLLDGSNVAVKVLNDSKGNGKEFI-NEVASISR 364
+ D+ K+T+ LG+G Y V L +G AVK++ G+ + + EV ++ +
Sbjct: 10 FEDMYKLTSEL---LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 365 -TSHVNVVALLGFC------LRVAEELSS---------------------TIGIARGLEY 396
+ N++ L+ F V E+L +A L++
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDF 126
Query: 397 LHLGCSTRILHFDIKPHNILLD--EDFCP-KISDFGLA---KICNRKESIIS--MTGARG 448
LH + I H D+KP NIL + E P KI DF L K+ N I + +T G
Sbjct: 127 LH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 449 TVGYIAPEVFCRNIGEVSY---KSDVYNYGMMIFEMTGG 484
+ Y+APEV + ++ + D+++ G++++ M G
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 113 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 168 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 210
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 310 IKKMTNSFKYKLGQGGYGSVYKGK---LL---DGSNVAVKVLNDSKGNGKE-FINEVASI 362
IK+ K++LG+G +G V+ + LL D VAVK L ++ + ++ F E +
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 363 SRTSHVNVVALLGFC------------------------------------------LRV 380
+ H ++V G C L +
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 381 AEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 440
+ L+ +A G+ YL +H D+ N L+ + KI DFG+++ +
Sbjct: 158 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214
Query: 441 ISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM-TGGRK------NVDVVDN 493
+ ++ PE + + +SDV+++G++++E+ T G++ N + +D
Sbjct: 215 RVGGRTMLPIRWMPPESILYR--KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272
Query: 494 GSTALDLQASR 504
+ +L+ R
Sbjct: 273 ITQGRELERPR 283
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 38/195 (19%)
Query: 321 LGQGGYGSVYKGK-LLDGSNVAVKVLNDSKGNG---KEFINEVASISRTSHVNVVALLGF 376
+G+G + V + +L G VAV++++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 377 C---------------------------LRVAEELSSTIGIARGLEYLHLGCSTRILHFD 409
++ E + I ++Y H I+H D
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH---QKFIVHRD 138
Query: 410 IKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
+K N+LLD D KI+DFG + + G+ Y APE+F + +
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC---GSPPYAAPELFQGKKYD-GPEV 194
Query: 470 DVYNYGMMIFEMTGG 484
DV++ G++++ + G
Sbjct: 195 DVWSLGVILYTLVSG 209
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 17/110 (15%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 111 AFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K S S+T T Y+APEV +G Y D+++ G++++
Sbjct: 166 K---ETTSHNSLTEPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 208
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILL--DEDFCP-KISDFGLAKICNRKESIISMTGA 446
I L Y H I+H D+KP N+LL E+ P K+ DFG+A ES + G
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGR 193
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APEV R DV+ G+++F + G
Sbjct: 194 VGTPHFMAPEVVKRE--PYGKPVDVWGCGVILFILLSG 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 196
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 197 RAPEV----ILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
T+ I + L YL ++H D+KP NILLDE K+ DFG I R + +
Sbjct: 130 TVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFG---ISGRLVDDKAKDRS 184
Query: 447 RGTVGYIAPE-VFCRNIGEVSY--KSDVYNYGMMIFEMTGGR 485
G Y+APE + + + Y ++DV++ G+ + E+ G+
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 18/110 (16%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLA 431
F R A E+ IG A +++LH S I H D+KP N+L ++D K++DFG A
Sbjct: 105 AFTEREAAEIMRDIGTA--IQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 159
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K + ++ T Y+APEV +G Y D+++ G++++
Sbjct: 160 KETTQN----ALQTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 201
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDE---DFCPKISDFGLA 431
F R A E+ +IG A ++YLH S I H D+KP N+L + K++DFG A
Sbjct: 157 AFTEREASEIXKSIGEA--IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEMTGG 484
K S S+T T Y+APEV +G Y D ++ G++ + + G
Sbjct: 212 K---ETTSHNSLTTPCYTPYYVAPEV----LGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 36/195 (18%)
Query: 320 KLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVALLG-- 375
+LG G +G V++ + G+N A K + + KE + E+ ++S H +V L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 376 -----------------FCLRVAEELSSTIGIARGLEYLHLGC-------STRILHFDIK 411
+VA+E + + +EY+ C +H D+K
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 176
Query: 412 PHNILLDEDFCP--KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
P NI+ K+ DFGL + K+S+ T GT + APEV V Y +
Sbjct: 177 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV--AEGKPVGYYT 231
Query: 470 DVYNYGMMIFEMTGG 484
D+++ G++ + + G
Sbjct: 232 DMWSVGVLSYILLSG 246
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 185
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 186 RAPEV----ILGMGYKENVDLWSVGCIMGEMV 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKE----SIISMTGAR 447
GLEYLH S RILH D+K N+LL D + DFG A +C + + S+++
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKSLLTGDYIP 252
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APEV K DV++ M+ M G
Sbjct: 253 GTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHMLNG 287
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 39/176 (22%)
Query: 320 KLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-SHVNVVAL-- 373
+LG+G + V + K+L G A K++N K + ++ + A I R H N+V L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 374 ---------LGFCLRVAEELSSTIGIARGLEYLHLG----CSTRIL------------HF 408
L F L EL I +AR EY C +IL H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDI-VAR--EYYSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 409 DIKPHNILLDEDF---CPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 461
D+KP N+LL K++DFGLA ++ + G GT GY++PEV ++
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKD 199
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 18/110 (16%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLA 431
F R A E+ IG A +++LH S I H D+KP N+L ++D K++DFG A
Sbjct: 124 AFTEREAAEIMRDIGTA--IQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178
Query: 432 KICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIF 479
K + ++ T Y+APEV +G Y D+++ G++++
Sbjct: 179 KETTQN----ALQTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNIL-LDEDFCP---KISDFGLAKICNRKESIISMTG 445
I + +EYLH + ++H D+KP NIL +DE P +I DFG AK + ++
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 446 ARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
T ++APEV R + + D+++ G++++ G
Sbjct: 182 Y--TANFVAPEVLERQGYDAA--CDIWSLGVLLYTXLTG 216
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 40/160 (25%)
Query: 316 SFKYKLGQGGYGSVYKG-KLLDGSNVAVK----VLNDSKGNGKEFINEVASISRTSHVNV 370
++ +G G YG V + L+ VA+K V D + K + E+A ++R +H +V
Sbjct: 56 EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI-DCKRILREIAILNRLNHDHV 114
Query: 371 VALLGFCL----RVAEELSSTIGIAR---------------------------GLEYLHL 399
V +L + +EL + IA G++Y+H
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH- 173
Query: 400 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKES 439
S ILH D+KP N L+++D K+ DFGLA+ + E+
Sbjct: 174 --SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 89/228 (39%), Gaps = 62/228 (27%)
Query: 292 TFLRNYRSLSPKRYGYADIKKMTNSFKYKLGQGGYGSVYKG-KLLDGSNVAVKVLN---D 347
T L+ Y+ L P +G G G V + G NVAVK L+
Sbjct: 21 TVLKRYQQLKP------------------IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ 62
Query: 348 SKGNGKEFINEVASISRTSHVNVVALLGFCL--RVAEELSSTIGIAR------------- 392
++ + K E+ + +H N+++LL + EE +
Sbjct: 63 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME 122
Query: 393 ---------------GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKI-CNR 436
G+++LH S I+H D+KP NI++ D KI DFGLA+ C
Sbjct: 123 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 179
Query: 437 KESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
MT T Y APEV +G + D+++ G ++ E+ G
Sbjct: 180 ----FMMTPYVVTRYYRAPEVIL-GMGYAA-NVDIWSVGCIMGELVKG 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 51/223 (22%)
Query: 302 PKRYGYADIKKMTNSFKYK--LGQGGYGSV-YKGKLLDGSNVAVKVLN--DSKGNGKEFI 356
PKR Y +++ F+ K LG+G YG V G VA+K + D +
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 357 NEVASISRTSHVNVVALLGFC----------LRVAEELSST------------------- 387
E+ + H N++ + + + +EL T
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 388 -IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS---- 442
R ++ LH + ++H D+KP N+L++ + K+ DFGLA+I + + S
Sbjct: 118 IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 443 ----MTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
MT T Y APEV + + S DV++ G ++ E+
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 41/185 (22%)
Query: 313 MTNSFKY--KLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-S 366
MT+ ++ +LG+G + V + K+ G A K++N K + ++ + A I R
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 367 HVNVVAL-----------LGFCLRVAEELSSTI----------------GIARGLEYLHL 399
H N+V L L F L EL I I + + HL
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 400 GCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
I+H D+KP N+LL + K++DFGLA + + G GT GY++PE
Sbjct: 122 NG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPE 176
Query: 457 VFCRN 461
V ++
Sbjct: 177 VLRKD 181
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 36/195 (18%)
Query: 320 KLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEFI-NEVASISRTSHVNVVALLG-- 375
+LG G +G V++ + G+N A K + + KE + E+ ++S H +V L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 376 -----------------FCLRVAEELSSTIGIARGLEYLHLGC-------STRILHFDIK 411
+VA+E + + +EY+ C +H D+K
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 282
Query: 412 PHNILLDEDFCP--KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 469
P NI+ K+ DFGL + K+S+ T GT + APEV V Y +
Sbjct: 283 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGK--PVGYYT 337
Query: 470 DVYNYGMMIFEMTGG 484
D+++ G++ + + G
Sbjct: 338 DMWSVGVLSYILLSG 352
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 41/185 (22%)
Query: 313 MTNSFKY--KLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-S 366
MT+ ++ +LG+G + V + K+ G A K++N K + ++ + A I R
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 367 HVNVVAL-----------LGFCLRVAEELSSTI----------------GIARGLEYLHL 399
H N+V L L F L EL I I + + HL
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 400 GCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 456
I+H D+KP N+LL + K++DFGLA + + G GT GY++PE
Sbjct: 122 NG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPE 176
Query: 457 VFCRN 461
V ++
Sbjct: 177 VLRKD 181
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 51/223 (22%)
Query: 302 PKRYGYADIKKMTNSFKYK--LGQGGYGSV-YKGKLLDGSNVAVKVLN--DSKGNGKEFI 356
PKR Y +++ F+ K LG+G YG V G VA+K + D +
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 357 NEVASISRTSHVNVVALLGFC----------LRVAEELSST------------------- 387
E+ + H N++ + + + +EL T
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 388 -IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS---- 442
R ++ LH + ++H D+KP N+L++ + K+ DFGLA+I + + S
Sbjct: 118 IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 443 ----MTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
MT T Y APEV + + S DV++ G ++ E+
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ I + LE+LH S ++H D+KP N+L++ K+ DFG++ ++
Sbjct: 115 AVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDID 169
Query: 447 RGTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMT 482
G Y+APE + + Y KSD+++ G+ + E+
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 207
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKESIIS--MTG--AR 447
GLEYLH S RILH D+K N+LL D + DFG A +C + + + +TG
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKDLLTGDYIP 233
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APEV K DV++ M+ M G
Sbjct: 234 GTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHMLNG 268
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + M T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 192 RAPEV----ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 390 IARGLEYLH-LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICNRKESIISMTGA 446
I LE+LH LG I++ DIK NILLD + ++DFGL+K + + E
Sbjct: 168 IVLALEHLHKLG----IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC-- 221
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT+ Y+AP++ D ++ G++++E+ G
Sbjct: 222 -GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGARGTV 450
G+ Y H + ++ H D+K N LLD P KI+DFG +K S A GT
Sbjct: 127 GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---AVGTP 180
Query: 451 GYIAPEVFCRNI--GEVSYKSDVYNYGMMIFEMTGG 484
YIAPEV + G+V +DV++ G+ ++ M G
Sbjct: 181 AYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR---NI 462
+H DIKP N+LLD + +++DFG N ++ S + A GT YI+PE+ +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS-SVAVGTPDYISPEILQAMEDGM 255
Query: 463 GEVSYKSDVYNYGMMIFEMTGGR 485
G+ + D ++ G+ ++EM G
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR---NI 462
+H DIKP N+LLD + +++DFG N ++ S + A GT YI+PE+ +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS-SVAVGTPDYISPEILQAMEDGM 271
Query: 463 GEVSYKSDVYNYGMMIFEMTGGR 485
G+ + D ++ G+ ++EM G
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 84/222 (37%), Gaps = 55/222 (24%)
Query: 310 IKKMTNSFKYKLGQGGYGSVYKGK------LLDGSNVAVKVLND-SKGNGKEFINEVASI 362
IK+ K +LG+G +G V+ + D VAVK L D + K+F E +
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 363 SRTSHVNVVALLGFC-------------------------------------------LR 379
+ H ++V G C L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 380 VAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKES 439
+++ L IA G+ YL S +H D+ N L+ + KI DFG+++ +
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 440 IISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
+ ++ PE + + +SDV+++G++++E+
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYR--KFTTESDVWSFGVILWEI 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 374 LGFCLRVAEELSSTI--GIARGLEYLHLGCSTRILHFDIKPHNILL--DEDFCPKISDFG 429
L F R E+L S I I L YLH + I H DIKP N L ++ F K+ DFG
Sbjct: 161 LDFVQR--EKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFG 215
Query: 430 LAKICNRKES--IISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGGRKN 487
L+K + + MT GT ++APEV K D ++ G+++ + G
Sbjct: 216 LSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
Query: 488 VDVVDNGST 496
V++ T
Sbjct: 276 FPGVNDADT 284
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 452
G+++LH S I+H D+KP NI++ D KI DFGLA+ + M T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYY 191
Query: 453 IAPEVFCRNIGEVSYKS--DVYNYGMMIFEMT 482
APEV I + YK D+++ G ++ EM
Sbjct: 192 RAPEV----ILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICNRKESIISMTGAR 447
I L +LH I++ D+K N+LLD + K++DFG+ K ICN ++
Sbjct: 133 IISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTATFC 185
Query: 448 GTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMTGGR 485
GT YIAPE+ + E+ Y D + G++++EM G
Sbjct: 186 GTPDYIAPEI----LQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGARGTV 450
G+ Y H S +I H D+K N LLD P KI DFG +K S + + + TV
Sbjct: 128 GVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTV 178
Query: 451 G---YIAPEVFCRNIGEVSYK-SDVYNYGMMIFEMTGG 484
G YIAPEV R E K +DV++ G+ ++ M G
Sbjct: 179 GTPAYIAPEVLLRQ--EYDGKIADVWSCGVTLYVMLVG 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKE----SIISMTGAR 447
GLEYLH + RILH D+K N+LL D + DFG A +C + + S+++
Sbjct: 162 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIP 217
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APEV K D+++ M+ M G
Sbjct: 218 GTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 252
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 375 GFCLRVAEELSSTIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKIC 434
G L VAE ++ + I L YLH S +++ D+KP NI+L E+ K+ D G
Sbjct: 176 GQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQL-KLIDLGAVSRI 231
Query: 435 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
N S GT G+ APE+ R V+ +D+Y G + +T
Sbjct: 232 N------SFGYLYGTPGFQAPEI-VRTGPTVA--TDIYTVGRTLAALT 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKE----SIISMTGAR 447
GLEYLH + RILH D+K N+LL D + DFG A +C + + S+++
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIP 233
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APEV K D+++ M+ M G
Sbjct: 234 GTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 268
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 55/220 (25%)
Query: 311 KKMTNSFKY---KLGQGGYGSVYKGKLLDGSNVAVKVLNDSKGNGKEFI--NEVASISRT 365
+++ + F+Y K+G+G YG VYK K DG + L +G G E+A +
Sbjct: 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLREL 75
Query: 366 SHVNVVALLGFCLRVAE------------ELSSTIGIAR--------------------- 392
H NV++L L A+ +L I R
Sbjct: 76 KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLY 135
Query: 393 ----GLEYLHLGCSTRILHFDIKPHNILL----DEDFCPKISDFGLAKICNRK-ESIISM 443
G+ YLH + +LH D+KP NIL+ E KI+D G A++ N + + +
Sbjct: 136 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 444 TGARGTVGYIAPEVFCRNIGEVSYKS--DVYNYGMMIFEM 481
T Y APE+ +G Y D++ G + E+
Sbjct: 193 DPVVVTFWYRAPELL---LGARHYTKAIDIWAIGCIFAEL 229
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKE----SIISMTGAR 447
GLEYLH + RILH D+K N+LL D + DFG A +C + + S+++
Sbjct: 176 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIP 231
Query: 448 GTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APEV K D+++ M+ M G
Sbjct: 232 GTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 266
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 49/212 (23%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + +G + E+ S H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 376 FCL-------------------------RVAEELSSTI--GIARGLEYLHLGCSTRILHF 408
+ R E+ S+T +A L Y H +++H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHR 138
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+L+ KI+DFG S+ + + R GT+ Y+ PE+ +
Sbjct: 139 DIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 465 VSYKSDVYNYGMMIFEMTGGRKNVDVVDNGST 496
K D++ G++ +E G D + T
Sbjct: 191 E--KVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 37/205 (18%)
Query: 313 MTNSFKY--KLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-S 366
MT+ ++ +G+G + V + KL G A K++N K + ++ + A I R
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 367 HVNVVAL-----------LGFCLRVAEELSSTIG-------------IARGLEYLHLGCS 402
H N+V L L F L EL I I + LE +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 403 TRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 459
++H D+KP N+LL + K++DFGLA + + G GT GY++PEV
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLR 179
Query: 460 RNIGEVSYKSDVYNYGMMIFEMTGG 484
+ D++ G++++ + G
Sbjct: 180 KE--AYGKPVDIWACGVILYILLVG 202
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 46/209 (22%)
Query: 309 DIKKMTNSFKYKLGQGGYGSVYKGKLLDGSNVAVKVL---NDSKGNGKEFINEVASISRT 365
D K++ +F KL + G ++KG+ G+++ VKVL + S ++F E +
Sbjct: 8 DFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 366 SHVNVVALLG-------------------------------FCLRVAEELSSTIGIARGL 394
SH NV+ +LG F + ++ + + ARG
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 395 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 454
+LH I + ++ +DED +IS + K S S G ++A
Sbjct: 125 AFLH-TLEPLIPRHALNSRSVXIDEDXTARIS------XADVKFSFQS-PGRXYAPAWVA 176
Query: 455 PEVFCRNIGEVSYKS-DVYNYGMMIFEMT 482
PE + + + +S D +++ ++++E+
Sbjct: 177 PEALQKKPEDTNRRSADXWSFAVLLWELV 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 49/212 (23%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + +G + E+ S H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 376 FCL-------------------------RVAEELSSTI--GIARGLEYLHLGCSTRILHF 408
+ R E+ S+T +A L Y H +++H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHR 138
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+L+ KI+DFG S+ + + R GT+ Y+ PE+ +
Sbjct: 139 DIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 465 VSYKSDVYNYGMMIFEMTGGRKNVDVVDNGST 496
K D++ G++ +E G D + T
Sbjct: 191 E--KVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 49/212 (23%)
Query: 321 LGQGGYGSVY-----KGKLLDGSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALLG 375
LG+G +G+VY + K + V K + +G + E+ S H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 376 FCL-------------------------RVAEELSSTI--GIARGLEYLHLGCSTRILHF 408
+ R E+ S+T +A L Y H +++H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHR 139
Query: 409 DIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVFCRNIGE 464
DIKP N+L+ KI+DFG S+ + + R GT+ Y+ PE+ +
Sbjct: 140 DIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 465 VSYKSDVYNYGMMIFEMTGGRKNVDVVDNGST 496
K D++ G++ +E G D + T
Sbjct: 192 E--KVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 18/84 (21%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLD-------------EDFCPKISDFGLAKICNR 436
IA G+ +LH S +I+H D+KP NIL+ E+ ISDFGL K +
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 437 KESII--SMTGARGTVGYIAPEVF 458
+S ++ GT G+ APE+
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELL 204
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 38/160 (23%)
Query: 316 SFKYKLGQGGYGSVYKGKLLDGS-NVAVKVLN---DSKGNGKEFINEVASISRTSHVNVV 371
K+ +G+G YG VY + + NVA+K +N + + K + E+ ++R ++
Sbjct: 31 EIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 90
Query: 372 AL--------------LGFCLRVA---------------EELSSTI--GIARGLEYLHLG 400
L L L +A E+ TI + G +++H
Sbjct: 91 RLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH-- 148
Query: 401 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 440
+ I+H D+KP N LL++D KI DFGLA+ N + I
Sbjct: 149 -ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI 187
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 51/223 (22%)
Query: 302 PKRYGYADIKKMTNSFKYK--LGQGGYGSV-YKGKLLDGSNVAVKVLN--DSKGNGKEFI 356
PKR Y +++ F+ K LG+G YG V G VA+K + D +
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 357 NEVASISRTSHVNVVALLGFC----------LRVAEELSST------------------- 387
E+ + H N++ + + + +EL T
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 388 -IGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS---- 442
R ++ LH + ++H D+KP N+L++ + K+ DFGLA+I + + S
Sbjct: 118 IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 443 ----MTGARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
M T Y APEV + + S DV++ G ++ E+
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 387 TIGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 446
+ I + LE+LH S ++H D+KP N+L++ K DFG++ ++
Sbjct: 142 AVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKDID 196
Query: 447 RGTVGYIAPEVFCRNIGEVSY--KSDVYNYGMMIFEMT 482
G Y APE + + Y KSD+++ G+ E+
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELA 234
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILL--DEDFCP-KISDFGLAKICNRKESIISMTGA 446
I L Y H I+H D+KPH +LL E+ P K+ FG+A ES + G
Sbjct: 141 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGR 195
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APEV R DV+ G+++F + G
Sbjct: 196 VGTPHFMAPEVVKRE--PYGKPVDVWGCGVILFILLSG 231
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LE +H I+H D+KP N L+ D K+ DFG+A + + GTV Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 454 APEVF-----CRNIG----EVSYKSDVYNYGMMIFEMTGGR 485
PE R G ++S KSDV++ G +++ MT G+
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LE +H I+H D+KP N L+ D K+ DFG+A + + GTV Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 454 APEVF-----CRNIG----EVSYKSDVYNYGMMIFEMTGGR 485
PE R G ++S KSDV++ G +++ MT G+
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILL--DEDFCP-KISDFGLAKICNRKESIISMTGA 446
I L Y H I+H D+KPH +LL E+ P K+ FG+A ES + G
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGR 193
Query: 447 RGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
GT ++APEV R DV+ G+++F + G
Sbjct: 194 VGTPHFMAPEVVKRE--PYGKPVDVWGCGVILFILLSG 229
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 337 GSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALL------GFCLRVAEELSSTIGI 390
G+N +K+L+ G ++ V + N++AL+ G L +++S + +
Sbjct: 84 GANHILKLLDHFNHKGPNGVH-VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 142
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMT 444
GL+Y+H C I+H DIKP N+L++ P KI+D G A C E T
Sbjct: 143 --GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE---HYT 193
Query: 445 GARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ T Y +PEV +D+++ +IFE+ G
Sbjct: 194 NSIQTREYRSPEVLLG--APWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 337 GSNVAVKVLNDSKGNGKEFINEVASISRTSHVNVVALL------GFCLRVAEELSSTIGI 390
G+N +K+L+ G ++ V + N++AL+ G L +++S + +
Sbjct: 84 GANHILKLLDHFNHKGPNGVH-VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 142
Query: 391 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESIISMT 444
GL+Y+H C I+H DIKP N+L++ P KI+D G A C E T
Sbjct: 143 --GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE---HYT 193
Query: 445 GARGTVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMTGG 484
+ T Y +PEV +D+++ +IFE+ G
Sbjct: 194 NSIQTREYRSPEVLLG--APWGCGADIWSTACLIFELITG 231
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 44/194 (22%)
Query: 320 KLGQGGYGSVYKG-KLLDGSNVAVKVLNDSKGN-------------GKEFINEVASI--- 362
KLG+G Y V++ + + V VK+L K N G I +A I
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITLADIVKD 103
Query: 363 --SRT-----SHVN-------VVALLGFCLRVAEELSSTIGIARGLEYLHLGCSTRILHF 408
SRT HVN L + +R I + L+Y H S I+H
Sbjct: 104 PVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY-----MYEILKALDYCH---SMGIMHR 155
Query: 409 DIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 467
D+KPHN+++D + ++ D+GLA+ + + +R G PE+ + Y
Sbjct: 156 DVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDY 211
Query: 468 KSDVYNYGMMIFEM 481
D+++ G M+ M
Sbjct: 212 SLDMWSLGCMLASM 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LE +H I+H D+KP N L+ D K+ DFG+A + + GTV Y+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 454 APEVF-----CRNIG----EVSYKSDVYNYGMMIFEMTGGR 485
PE R G ++S KSDV++ G +++ MT G+
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLD-------------EDFCPKISDFGLAKICNR 436
IA G+ +LH S +I+H D+KP NIL+ E+ ISDFGL K +
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 437 KESII--SMTGARGTVGYIAPEVFCRNIGEVSYKS-DVYNYGMMIF 479
+ ++ GT G+ APE+ + +S D+++ G + +
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LE +H I+H D+KP N L+ + K+ DFG+A + + GTV Y+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 454 APEVF-----CRNIG----EVSYKSDVYNYGMMIFEMTGGR 485
PE R G ++S KSDV++ G +++ MT G+
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LE +H I+H D+KP N L+ D K+ DFG+A + + GTV Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 454 APEVF-----CRNIG----EVSYKSDVYNYGMMIFEMTGGR 485
PE R G ++S KSDV++ G +++ MT G+
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLD-------------EDFCPKISDFGLAKICNR 436
IA G+ +LH S +I+H D+KP NIL+ E+ ISDFGL K +
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 437 KESII--SMTGARGTVGYIAPEVFCRNIGEVSYKS-DVYNYGMMIF 479
+ ++ GT G+ APE+ + +S D+++ G + +
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 406 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR---NI 462
+H DIKP NIL+D + +++DFG + + ++ + + A GT YI+PE+
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 463 GEVSYKSDVYNYGMMIFEMTGGR 485
G + D ++ G+ ++EM G
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LE +H I+H D+KP N L+ D K+ DFG+A + GTV Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 454 APEVF-----CRNIG----EVSYKSDVYNYGMMIFEMTGGR 485
PE R G ++S KSDV++ G +++ MT G+
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LE +H I+H D+KP N L+ D K+ DFG+A + + GTV Y+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 454 APEVF-----CRNIG----EVSYKSDVYNYGMMIFEMTGGR 485
PE R G ++S KSDV++ G +++ MT G+
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLD-------------EDFCPKISDFGLAKICNR 436
IA G+ +LH S +I+H D+KP NIL+ E+ ISDFGL K +
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 437 KESII--SMTGARGTVGYIAPEVF 458
+ ++ GT G+ APE+
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELL 204
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 405 ILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 461
I+H D+KP N+LL + K++DFGLA ++ + G GT GY++PEV ++
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ--AWFGFAGTPGYLSPEVLRKD 208
Query: 462 IGEVSYKSDVYNYGMMIFEMTGG 484
D++ G++++ + G
Sbjct: 209 --PYGKPVDIWACGVILYILLVG 229
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 33/173 (19%)
Query: 320 KLGQGGYGSVYK-GKLLDGSNVAVKVLNDSKGNGKEF--INEVASISRT-SHVNVVAL-- 373
+LG+G + V + K+L G A ++N K + ++ + A I R H N+V L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 374 ---------LGFCLRVAEELSSTIG-------------IARGLEYLHLGCSTRILHFDIK 411
L F L EL I I + LE + ++H ++K
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLK 137
Query: 412 PHNILLDEDF---CPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 461
P N+LL K++DFGLA ++ + G GT GY++PEV ++
Sbjct: 138 PENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKD 188
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA----RGT 449
L +LH S ++H D+KP NI L K+ DFGL + GA G
Sbjct: 170 LAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLL-------VELGTAGAGEVQEGD 219
Query: 450 VGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEMT 482
Y+APE+ + G +DV++ G+ I E+
Sbjct: 220 PRYMAPELLQGSYGTA---ADVFSLGLTILEVA 249
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
I + L+Y H S I+H D+KPHN+L+D + ++ D+GLA+ + + +R
Sbjct: 140 ILKALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ + Y D+++ G M+ M
Sbjct: 197 FKG---PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 38/154 (24%)
Query: 317 FKYKLGQGGYGSVYKGKLLDGS-NVAVKVLN---DSKGNGKEFINEVASISRTSHVNVVA 372
K+ +G+G YG VY + NVA+K +N + + K + E+ ++R ++
Sbjct: 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIR 89
Query: 373 L--------------LGFCLRVA---------------EELSSTI--GIARGLEYLHLGC 401
L L L +A EE TI + G ++H
Sbjct: 90 LYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH--- 146
Query: 402 STRILHFDIKPHNILLDEDFCPKISDFGLAKICN 435
+ I+H D+KP N LL++D K+ DFGLA+ N
Sbjct: 147 ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 136 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 192
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 193 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 221
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 135 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 191
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 192 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 220
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 134 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 191 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 219
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 155 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 211
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 212 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 240
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 134 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 191 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 219
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 134 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 191 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 219
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 134 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 191 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 219
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 134 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 191 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 219
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 394 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 453
LE +H I+H D+KP N L+ D K+ DFG+A + + G V Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 454 APEVF-----CRNIG----EVSYKSDVYNYGMMIFEMTGGR 485
PE R G ++S KSDV++ G +++ MT G+
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 135 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 191
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 192 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 220
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
+ + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 134 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ ++ + Y D+++ G M M
Sbjct: 191 FKG---PELLV-DLQDYDYSLDMWSLGCMFAGM 219
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 390 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKICNRKESIISMTGARG 448
I + L+Y H S I+H D+KPHN+++D + ++ D+GLA+ + + +R
Sbjct: 140 ILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 449 TVGYIAPEVFCRNIGEVSYKSDVYNYGMMIFEM 481
G PE+ + Y D+++ G M+ M
Sbjct: 197 FKG---PELLV-DYQMYDYSLDMWSLGCMLASM 225
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 19/99 (19%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAK---ICNRKESIISMTGAR 447
G+ Y H + ++ H D+K N LLD P KI DFG +K + ++ +S +
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV------ 177
Query: 448 GTVGYIAPEVFCRNI--GEVSYKSDVYNYGMMIFEMTGG 484
GT YIAPEV + G+V +DV++ G+ ++ M G
Sbjct: 178 GTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Query: 393 GLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGARGTV 450
G+ Y H + ++ H D+K N LLD P KI DFG +K S + + + TV
Sbjct: 126 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTV 176
Query: 451 G---YIAPEVFCRNI--GEVSYKSDVYNYGMMIFEMTGG 484
G YIAPEV + G+V +DV++ G+ ++ M G
Sbjct: 177 GTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,150,890
Number of Sequences: 62578
Number of extensions: 577963
Number of successful extensions: 3088
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 254
Number of HSP's that attempted gapping in prelim test: 1500
Number of HSP's gapped (non-prelim): 1367
length of query: 506
length of database: 14,973,337
effective HSP length: 103
effective length of query: 403
effective length of database: 8,527,803
effective search space: 3436704609
effective search space used: 3436704609
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)