Query 039233
Match_columns 359
No_of_seqs 281 out of 1429
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 12:42:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039233.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039233hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_A Protein arginine N-meth 100.0 1.2E-87 4.2E-92 701.7 26.1 308 1-359 291-637 (637)
2 3ua3_A Protein arginine N-meth 100.0 2E-85 6.8E-90 684.4 22.0 322 3-359 347-737 (745)
3 4hc4_A Protein arginine N-meth 100.0 3.7E-52 1.3E-56 412.3 22.0 283 32-341 40-364 (376)
4 3q7e_A Protein arginine N-meth 100.0 1.6E-39 5.4E-44 318.2 23.9 275 59-358 40-349 (349)
5 1g6q_1 HnRNP arginine N-methyl 100.0 2.1E-38 7E-43 307.7 26.0 250 58-330 11-293 (328)
6 2fyt_A Protein arginine N-meth 100.0 9.1E-38 3.1E-42 304.9 25.7 262 57-341 36-330 (340)
7 2y1w_A Histone-arginine methyl 100.0 8E-37 2.7E-41 298.8 26.0 271 59-343 24-326 (348)
8 3r0q_C Probable protein argini 100.0 3.5E-36 1.2E-40 297.4 25.6 271 60-341 38-360 (376)
9 3b3j_A Histone-arginine methyl 100.0 2E-35 7E-40 301.1 17.6 266 60-342 133-433 (480)
10 3k6r_A Putative transferase PH 99.4 5.2E-13 1.8E-17 126.9 10.0 102 74-182 116-221 (278)
11 2frn_A Hypothetical protein PH 99.3 9.2E-12 3.2E-16 117.4 10.5 105 74-185 116-224 (278)
12 4gek_A TRNA (CMO5U34)-methyltr 99.3 7.7E-12 2.6E-16 117.3 9.8 126 58-184 40-176 (261)
13 3p9n_A Possible methyltransfer 99.3 9.8E-12 3.3E-16 109.5 9.1 99 83-185 46-152 (189)
14 3gnl_A Uncharacterized protein 99.3 6.1E-12 2.1E-16 117.4 7.5 117 66-186 4-125 (244)
15 3kr9_A SAM-dependent methyltra 99.2 9.8E-12 3.4E-16 114.7 8.0 108 75-186 7-119 (225)
16 3lec_A NADB-rossmann superfami 99.2 1.1E-11 3.7E-16 114.8 8.0 113 70-186 8-125 (230)
17 3hem_A Cyclopropane-fatty-acyl 99.2 1.5E-10 5.1E-15 109.4 14.0 98 84-185 75-182 (302)
18 3njr_A Precorrin-6Y methylase; 99.2 1.4E-10 4.8E-15 104.2 12.7 94 83-185 57-153 (204)
19 3d2l_A SAM-dependent methyltra 99.2 4.6E-11 1.6E-15 108.2 9.5 121 57-183 8-134 (243)
20 3e05_A Precorrin-6Y C5,15-meth 99.2 1.1E-10 3.9E-15 103.7 11.8 96 83-184 42-140 (204)
21 3lpm_A Putative methyltransfer 99.2 2.5E-11 8.5E-16 112.7 7.5 100 83-183 51-173 (259)
22 3mti_A RRNA methylase; SAM-dep 99.2 5.1E-11 1.7E-15 104.1 9.1 100 83-186 24-135 (185)
23 2ift_A Putative methylase HI07 99.2 6.7E-11 2.3E-15 105.9 10.0 103 83-189 55-166 (201)
24 3jwh_A HEN1; methyltransferase 99.2 6.9E-11 2.4E-15 106.0 10.1 115 70-185 14-140 (217)
25 3eey_A Putative rRNA methylase 99.2 7.7E-11 2.6E-15 103.9 9.8 101 83-184 24-137 (197)
26 3jwg_A HEN1, methyltransferase 99.2 7.5E-11 2.6E-15 105.8 9.5 102 83-185 31-140 (219)
27 3ocj_A Putative exported prote 99.2 2.2E-11 7.6E-16 115.5 6.0 130 55-184 87-225 (305)
28 2fhp_A Methylase, putative; al 99.2 7.2E-11 2.5E-15 102.6 8.8 98 83-184 46-152 (187)
29 1y8c_A S-adenosylmethionine-de 99.2 8.3E-11 2.8E-15 106.3 9.2 122 58-183 8-139 (246)
30 3thr_A Glycine N-methyltransfe 99.2 9.1E-11 3.1E-15 109.8 9.7 130 53-184 24-173 (293)
31 3kkz_A Uncharacterized protein 99.1 1.4E-10 4.8E-15 107.4 10.8 100 83-186 48-150 (267)
32 3g89_A Ribosomal RNA small sub 99.1 5.6E-11 1.9E-15 110.5 8.1 93 84-183 83-181 (249)
33 3fpf_A Mtnas, putative unchara 99.1 2.2E-10 7.4E-15 109.8 12.2 106 69-183 103-219 (298)
34 1nkv_A Hypothetical protein YJ 99.1 1.6E-10 5.5E-15 105.7 10.9 97 83-183 38-137 (256)
35 3f4k_A Putative methyltransfer 99.1 1.4E-10 4.9E-15 106.1 10.6 100 83-186 48-150 (257)
36 2ozv_A Hypothetical protein AT 99.1 5.5E-11 1.9E-15 110.9 7.5 101 83-183 38-167 (260)
37 3m70_A Tellurite resistance pr 99.1 2.4E-10 8.1E-15 106.9 11.7 97 83-183 122-220 (286)
38 3g2m_A PCZA361.24; SAM-depende 99.1 6.3E-11 2.1E-15 111.8 6.3 128 54-184 53-188 (299)
39 2xvm_A Tellurite resistance pr 99.1 2.7E-10 9.2E-15 99.8 9.9 98 83-183 34-133 (199)
40 3dtn_A Putative methyltransfer 99.1 1.6E-10 5.5E-15 104.5 8.6 124 57-183 14-145 (234)
41 1xdz_A Methyltransferase GIDB; 99.1 1.3E-10 4.3E-15 106.6 7.9 94 84-184 73-172 (240)
42 3dlc_A Putative S-adenosyl-L-m 99.1 3.6E-10 1.2E-14 100.1 10.5 97 84-184 46-146 (219)
43 1jsx_A Glucose-inhibited divis 99.1 3.7E-10 1.3E-14 100.2 10.1 95 83-185 67-164 (207)
44 3ntv_A MW1564 protein; rossman 99.1 4.7E-10 1.6E-14 102.4 10.6 98 83-185 73-175 (232)
45 3evz_A Methyltransferase; NYSG 99.1 2.1E-10 7E-15 103.6 8.0 98 83-183 57-176 (230)
46 3dr5_A Putative O-methyltransf 99.1 5.2E-10 1.8E-14 102.1 10.7 100 84-188 59-165 (221)
47 1ve3_A Hypothetical protein PH 99.1 3.1E-10 1E-14 101.7 8.9 110 70-183 25-139 (227)
48 3pfg_A N-methyltransferase; N, 99.1 1.2E-10 4.3E-15 107.3 6.5 121 57-185 19-150 (263)
49 2fpo_A Methylase YHHF; structu 99.1 2.8E-10 9.5E-15 101.9 8.5 98 83-185 56-159 (202)
50 3hm2_A Precorrin-6Y C5,15-meth 99.1 7.2E-10 2.5E-14 95.5 10.7 95 83-184 27-125 (178)
51 3a27_A TYW2, uncharacterized p 99.1 3.8E-10 1.3E-14 106.1 9.5 93 83-183 121-216 (272)
52 4htf_A S-adenosylmethionine-de 99.1 5E-10 1.7E-14 104.6 10.2 96 84-183 71-170 (285)
53 3bus_A REBM, methyltransferase 99.1 8E-10 2.7E-14 102.1 11.3 97 83-184 63-164 (273)
54 1yzh_A TRNA (guanine-N(7)-)-me 99.1 8.6E-10 3E-14 99.0 11.1 100 83-183 43-153 (214)
55 3ofk_A Nodulation protein S; N 99.0 2.4E-10 8.4E-15 102.0 7.4 107 72-183 38-151 (216)
56 2esr_A Methyltransferase; stru 99.0 1.7E-10 5.8E-15 100.0 6.1 98 83-184 33-136 (177)
57 1wzn_A SAM-dependent methyltra 99.0 4.3E-10 1.5E-14 102.7 8.8 96 83-183 43-142 (252)
58 1kpg_A CFA synthase;, cyclopro 99.0 1E-09 3.5E-14 102.5 11.3 96 84-184 67-166 (287)
59 3vc1_A Geranyl diphosphate 2-C 99.0 5.7E-10 1.9E-14 106.1 9.7 94 84-183 120-218 (312)
60 3mb5_A SAM-dependent methyltra 99.0 8.1E-10 2.8E-14 101.4 10.1 94 83-183 95-191 (255)
61 2fk8_A Methoxy mycolic acid sy 99.0 1.2E-09 4.1E-14 103.8 11.5 95 84-183 93-191 (318)
62 3lcc_A Putative methyl chlorid 99.0 1.9E-10 6.5E-15 104.3 5.6 99 83-184 68-169 (235)
63 2nxc_A L11 mtase, ribosomal pr 99.0 3.6E-10 1.2E-14 105.0 7.4 106 70-184 107-216 (254)
64 1zx0_A Guanidinoacetate N-meth 99.0 5E-10 1.7E-14 102.0 8.1 98 83-183 62-167 (236)
65 3dh0_A SAM dependent methyltra 99.0 1.1E-09 3.9E-14 97.7 9.9 98 83-184 39-141 (219)
66 3u81_A Catechol O-methyltransf 99.0 7.1E-10 2.4E-14 100.1 8.5 103 83-188 60-172 (221)
67 3grz_A L11 mtase, ribosomal pr 99.0 6.2E-10 2.1E-14 98.8 7.8 94 83-184 62-157 (205)
68 3c3p_A Methyltransferase; NP_9 99.0 1.2E-09 4.1E-14 97.6 9.7 98 83-186 58-160 (210)
69 3g5t_A Trans-aconitate 3-methy 99.0 2.8E-09 9.5E-14 100.5 12.6 126 53-184 7-147 (299)
70 3duw_A OMT, O-methyltransferas 99.0 9.3E-10 3.2E-14 99.0 8.7 98 83-185 60-166 (223)
71 2igt_A SAM dependent methyltra 99.0 9E-10 3.1E-14 106.8 9.1 98 83-182 155-268 (332)
72 3tfw_A Putative O-methyltransf 99.0 1.4E-09 4.7E-14 100.5 9.9 99 83-186 65-170 (248)
73 2ex4_A Adrenal gland protein A 99.0 2.2E-10 7.4E-15 104.5 4.4 98 83-183 81-182 (241)
74 3gu3_A Methyltransferase; alph 99.0 1.5E-09 5.1E-14 101.8 9.9 96 83-183 24-123 (284)
75 3uwp_A Histone-lysine N-methyl 99.0 1.3E-09 4.5E-14 108.7 9.8 97 83-183 175-285 (438)
76 1pjz_A Thiopurine S-methyltran 99.0 2.8E-10 9.6E-15 102.0 4.3 96 83-181 24-135 (203)
77 3bxo_A N,N-dimethyltransferase 99.0 6.8E-10 2.3E-14 100.2 6.9 120 57-184 9-139 (239)
78 1nv8_A HEMK protein; class I a 99.0 2.3E-09 8E-14 101.5 10.9 98 83-183 125-246 (284)
79 1dus_A MJ0882; hypothetical pr 99.0 1.1E-09 3.7E-14 95.0 7.9 99 83-184 54-155 (194)
80 3tr6_A O-methyltransferase; ce 99.0 4.9E-10 1.7E-14 100.8 5.8 96 83-183 66-171 (225)
81 2kw5_A SLR1183 protein; struct 99.0 2E-09 6.7E-14 95.1 9.6 96 83-184 31-129 (202)
82 3dxy_A TRNA (guanine-N(7)-)-me 99.0 1.1E-09 3.7E-14 99.8 7.9 100 83-183 36-147 (218)
83 3gdh_A Trimethylguanosine synt 99.0 1.7E-10 5.8E-15 105.1 2.5 98 83-185 80-180 (241)
84 1nt2_A Fibrillarin-like PRE-rR 99.0 1.6E-09 5.4E-14 98.0 8.9 93 83-183 59-158 (210)
85 1ri5_A MRNA capping enzyme; me 99.0 1E-09 3.5E-14 102.2 7.9 100 83-183 66-171 (298)
86 1fbn_A MJ fibrillarin homologu 98.9 1.2E-09 3.9E-14 99.5 7.8 94 83-184 76-176 (230)
87 3hnr_A Probable methyltransfer 98.9 1.2E-09 4.2E-14 97.5 7.8 94 83-184 47-143 (220)
88 2pxx_A Uncharacterized protein 98.9 5.6E-10 1.9E-14 98.7 5.5 110 70-183 29-156 (215)
89 2o57_A Putative sarcosine dime 98.9 1.9E-09 6.4E-14 101.1 9.3 97 83-184 84-185 (297)
90 3adn_A Spermidine synthase; am 98.9 9.4E-10 3.2E-14 105.0 7.2 103 83-186 85-198 (294)
91 3g5l_A Putative S-adenosylmeth 98.9 1.4E-09 4.7E-14 99.6 8.0 94 84-184 47-143 (253)
92 2p8j_A S-adenosylmethionine-de 98.9 1.3E-09 4.6E-14 96.4 7.6 114 66-184 7-126 (209)
93 1ws6_A Methyltransferase; stru 98.9 6.4E-10 2.2E-14 95.0 5.3 96 83-186 43-147 (171)
94 1vl5_A Unknown conserved prote 98.9 2.1E-09 7.3E-14 98.8 9.2 96 83-184 39-138 (260)
95 2gb4_A Thiopurine S-methyltran 98.9 1.2E-09 4.1E-14 101.8 7.6 99 83-183 70-188 (252)
96 1sui_A Caffeoyl-COA O-methyltr 98.9 2.9E-09 1E-13 98.6 10.1 98 83-185 81-189 (247)
97 3axs_A Probable N(2),N(2)-dime 98.9 1.6E-09 5.6E-14 107.5 8.8 96 83-185 54-157 (392)
98 4dcm_A Ribosomal RNA large sub 98.9 1.5E-09 5.2E-14 106.9 8.4 101 83-183 224-331 (375)
99 3v97_A Ribosomal RNA large sub 98.9 1E-09 3.5E-14 116.5 7.3 107 75-183 532-654 (703)
100 2fca_A TRNA (guanine-N(7)-)-me 98.9 3.4E-09 1.2E-13 95.7 9.8 99 83-183 40-150 (213)
101 2p7i_A Hypothetical protein; p 98.9 1.1E-09 3.7E-14 98.8 6.5 92 83-184 44-139 (250)
102 3h2b_A SAM-dependent methyltra 98.9 3.6E-09 1.2E-13 93.4 9.7 94 82-183 42-138 (203)
103 1g8a_A Fibrillarin-like PRE-rR 98.9 2.4E-09 8.4E-14 96.6 8.8 93 83-183 75-175 (227)
104 1l3i_A Precorrin-6Y methyltran 98.9 3.9E-09 1.3E-13 91.2 9.8 95 83-184 35-132 (192)
105 3mgg_A Methyltransferase; NYSG 98.9 4E-09 1.4E-13 97.7 10.4 96 84-183 40-139 (276)
106 1iy9_A Spermidine synthase; ro 98.9 1.6E-09 5.5E-14 102.2 7.7 104 83-187 77-190 (275)
107 2avd_A Catechol-O-methyltransf 98.9 9.9E-10 3.4E-14 99.1 6.0 99 83-186 71-179 (229)
108 3fzg_A 16S rRNA methylase; met 98.9 8.5E-10 2.9E-14 99.4 5.3 111 69-183 35-149 (200)
109 2hnk_A SAM-dependent O-methylt 98.9 2.3E-09 7.7E-14 98.0 8.3 97 83-184 62-179 (239)
110 3sm3_A SAM-dependent methyltra 98.9 1.7E-09 5.8E-14 96.9 7.3 101 83-185 32-140 (235)
111 1xtp_A LMAJ004091AAA; SGPP, st 98.9 1.7E-09 5.7E-14 98.6 7.3 98 83-184 95-195 (254)
112 3gjy_A Spermidine synthase; AP 98.9 2.3E-09 7.9E-14 103.5 8.6 102 84-186 92-200 (317)
113 2b3t_A Protein methyltransfera 98.9 2.6E-09 8.8E-14 99.9 8.5 100 83-184 111-236 (276)
114 2yx1_A Hypothetical protein MJ 98.9 2.1E-09 7.4E-14 104.0 8.2 95 83-188 197-293 (336)
115 3dp7_A SAM-dependent methyltra 98.9 4.2E-09 1.5E-13 102.6 10.2 98 84-183 182-284 (363)
116 2ipx_A RRNA 2'-O-methyltransfe 98.9 2.8E-09 9.6E-14 96.8 8.4 95 83-184 79-180 (233)
117 3orh_A Guanidinoacetate N-meth 98.9 1.6E-09 5.6E-14 99.4 6.9 108 73-183 49-167 (236)
118 3tma_A Methyltransferase; thum 98.9 9.4E-09 3.2E-13 99.7 12.6 154 21-183 144-314 (354)
119 2gpy_A O-methyltransferase; st 98.9 5.3E-09 1.8E-13 94.9 10.1 97 83-185 56-159 (233)
120 3c0k_A UPF0064 protein YCCW; P 98.9 2.5E-09 8.7E-14 105.6 8.6 105 83-188 222-341 (396)
121 1o54_A SAM-dependent O-methylt 98.9 2.8E-09 9.5E-14 99.6 8.4 95 83-184 114-211 (277)
122 3c3y_A Pfomt, O-methyltransfer 98.9 3.3E-09 1.1E-13 97.4 8.5 100 83-187 72-182 (237)
123 3ou2_A SAM-dependent methyltra 98.9 2.5E-09 8.7E-14 94.8 7.2 95 83-184 48-144 (218)
124 1xxl_A YCGJ protein; structura 98.9 4.7E-09 1.6E-13 95.7 9.1 96 83-184 23-122 (239)
125 3gwz_A MMCR; methyltransferase 98.9 1E-08 3.6E-13 100.1 11.9 122 59-183 165-304 (369)
126 3i53_A O-methyltransferase; CO 98.9 1E-08 3.6E-13 98.1 11.7 122 59-183 132-271 (332)
127 4dzr_A Protein-(glutamine-N5) 98.9 3.1E-10 1.1E-14 100.2 0.8 96 84-181 33-159 (215)
128 3r3h_A O-methyltransferase, SA 98.9 6.8E-10 2.3E-14 102.6 3.1 100 83-187 62-171 (242)
129 3dmg_A Probable ribosomal RNA 98.9 5.5E-09 1.9E-13 103.2 9.7 97 83-183 235-337 (381)
130 2as0_A Hypothetical protein PH 98.9 2.2E-09 7.5E-14 106.0 6.8 105 83-189 219-338 (396)
131 2ip2_A Probable phenazine-spec 98.9 3E-09 1E-13 101.8 7.4 123 59-184 132-270 (334)
132 2b78_A Hypothetical protein SM 98.9 1.8E-09 6.1E-14 106.6 5.9 107 83-190 214-335 (385)
133 1mjf_A Spermidine synthase; sp 98.9 2.7E-09 9.4E-14 100.7 6.9 101 83-185 77-192 (281)
134 1qzz_A RDMB, aclacinomycin-10- 98.9 6.1E-09 2.1E-13 101.1 9.5 97 84-183 185-284 (374)
135 2yvl_A TRMI protein, hypotheti 98.9 9.5E-09 3.2E-13 93.4 10.2 92 83-183 93-187 (248)
136 2r3s_A Uncharacterized protein 98.8 4.1E-09 1.4E-13 100.5 8.1 97 84-183 168-268 (335)
137 1inl_A Spermidine synthase; be 98.8 1.9E-09 6.4E-14 102.8 5.5 103 83-186 92-205 (296)
138 2pwy_A TRNA (adenine-N(1)-)-me 98.8 6.3E-09 2.2E-13 95.1 8.9 93 83-183 98-195 (258)
139 3bwc_A Spermidine synthase; SA 98.8 3.9E-09 1.3E-13 100.9 7.7 103 83-185 97-209 (304)
140 3g07_A 7SK snRNA methylphospha 98.8 1.3E-09 4.3E-14 103.2 4.1 99 84-183 49-217 (292)
141 1tw3_A COMT, carminomycin 4-O- 98.8 8.6E-09 3E-13 99.6 10.0 121 60-183 147-285 (360)
142 3ajd_A Putative methyltransfer 98.8 5E-09 1.7E-13 98.3 8.1 106 83-189 85-214 (274)
143 2a14_A Indolethylamine N-methy 98.8 6.5E-10 2.2E-14 103.4 2.0 101 84-185 58-196 (263)
144 2o07_A Spermidine synthase; st 98.8 3.4E-09 1.2E-13 101.5 7.1 104 83-186 97-209 (304)
145 1x19_A CRTF-related protein; m 98.8 6.3E-09 2.1E-13 100.9 8.8 97 84-183 193-292 (359)
146 3e23_A Uncharacterized protein 98.8 2.7E-09 9.3E-14 94.9 5.7 93 83-184 45-139 (211)
147 2pt6_A Spermidine synthase; tr 98.8 1.9E-09 6.6E-14 104.0 5.0 104 83-186 118-230 (321)
148 3bkw_A MLL3908 protein, S-aden 98.8 7E-09 2.4E-13 93.7 8.4 101 76-183 34-141 (243)
149 2yxd_A Probable cobalt-precorr 98.8 1.8E-08 6.3E-13 86.5 10.5 91 83-184 37-129 (183)
150 1o9g_A RRNA methyltransferase; 98.8 1.7E-09 5.8E-14 99.4 4.2 100 84-183 54-211 (250)
151 1wy7_A Hypothetical protein PH 98.8 2E-08 6.8E-13 89.0 11.0 93 83-182 51-145 (207)
152 2pjd_A Ribosomal RNA small sub 98.8 7.6E-09 2.6E-13 100.1 8.9 107 74-183 185-300 (343)
153 3cbg_A O-methyltransferase; cy 98.8 4.7E-09 1.6E-13 95.8 6.9 99 83-186 74-182 (232)
154 3cgg_A SAM-dependent methyltra 98.8 5.2E-09 1.8E-13 90.7 6.9 101 74-183 37-144 (195)
155 3bkx_A SAM-dependent methyltra 98.8 1.1E-08 3.9E-13 94.5 9.5 99 83-184 45-157 (275)
156 3ldg_A Putative uncharacterize 98.8 1.8E-08 6.2E-13 99.7 11.5 75 104-178 257-333 (384)
157 3ujc_A Phosphoethanolamine N-m 98.8 4.3E-09 1.5E-13 96.2 6.5 96 84-185 58-158 (266)
158 2b2c_A Spermidine synthase; be 98.8 4.2E-09 1.4E-13 101.4 6.7 104 83-186 110-222 (314)
159 4df3_A Fibrillarin-like rRNA/T 98.8 8.4E-09 2.9E-13 95.5 8.4 102 75-183 64-179 (233)
160 4fsd_A Arsenic methyltransfera 98.8 1E-08 3.5E-13 100.7 9.5 99 84-184 86-201 (383)
161 1yb2_A Hypothetical protein TA 98.8 8.4E-09 2.9E-13 96.4 8.4 93 83-183 112-208 (275)
162 3mcz_A O-methyltransferase; ad 98.8 8.1E-09 2.8E-13 99.5 8.3 98 84-183 182-284 (352)
163 3bzb_A Uncharacterized protein 98.8 1.2E-08 4E-13 96.1 8.9 96 84-182 82-201 (281)
164 1xj5_A Spermidine synthase 1; 98.8 7E-09 2.4E-13 100.7 7.4 110 83-192 122-241 (334)
165 2h00_A Methyltransferase 10 do 98.8 4.1E-09 1.4E-13 96.8 5.5 71 84-155 68-148 (254)
166 3l8d_A Methyltransferase; stru 98.8 1.5E-08 5.2E-13 91.5 9.2 103 74-184 44-151 (242)
167 2qm3_A Predicted methyltransfe 98.8 1.3E-08 4.6E-13 99.6 9.4 92 84-181 175-272 (373)
168 2vdw_A Vaccinia virus capping 98.8 1.5E-08 5.1E-13 96.8 9.5 99 83-183 50-166 (302)
169 2yqz_A Hypothetical protein TT 98.8 3E-08 1E-12 90.5 11.1 96 83-185 41-140 (263)
170 3id6_C Fibrillarin-like rRNA/T 98.8 1.9E-08 6.4E-13 93.0 9.6 93 83-183 78-178 (232)
171 2b25_A Hypothetical protein; s 98.8 1E-08 3.6E-13 98.5 8.2 94 83-183 107-216 (336)
172 1ixk_A Methyltransferase; open 98.8 1.4E-08 4.7E-13 97.5 9.0 105 83-188 120-248 (315)
173 3ggd_A SAM-dependent methyltra 98.8 8.2E-09 2.8E-13 93.9 6.9 95 83-183 58-160 (245)
174 1i9g_A Hypothetical protein RV 98.8 1.4E-08 4.6E-13 94.4 8.3 94 83-183 101-200 (280)
175 1u2z_A Histone-lysine N-methyl 98.8 1.3E-08 4.5E-13 102.2 8.7 98 83-184 244-357 (433)
176 3m33_A Uncharacterized protein 98.8 9.7E-09 3.3E-13 92.9 7.0 96 72-183 37-139 (226)
177 3lbf_A Protein-L-isoaspartate 98.8 7.4E-09 2.5E-13 92.0 6.0 90 83-183 79-171 (210)
178 2qe6_A Uncharacterized protein 98.8 3E-08 1E-12 93.3 10.6 100 83-185 79-195 (274)
179 1uir_A Polyamine aminopropyltr 98.8 1.2E-08 4.1E-13 97.9 7.8 104 83-187 79-196 (314)
180 1i1n_A Protein-L-isoaspartate 98.7 1.1E-08 3.6E-13 92.2 6.9 94 83-184 79-180 (226)
181 2i7c_A Spermidine synthase; tr 98.7 1E-08 3.5E-13 97.0 7.0 104 83-186 80-192 (283)
182 1wxx_A TT1595, hypothetical pr 98.7 6.6E-09 2.3E-13 102.2 5.9 103 83-189 211-328 (382)
183 2vdv_E TRNA (guanine-N(7)-)-me 98.7 2.9E-08 1E-12 91.1 9.8 101 83-184 51-171 (246)
184 1dl5_A Protein-L-isoaspartate 98.7 1.6E-08 5.6E-13 96.6 8.4 94 83-185 77-174 (317)
185 2p35_A Trans-aconitate 2-methy 98.7 1.4E-08 4.8E-13 92.7 7.5 93 83-184 35-130 (259)
186 4dmg_A Putative uncharacterize 98.7 1.6E-08 5.4E-13 100.3 8.1 109 75-188 206-328 (393)
187 2bm8_A Cephalosporin hydroxyla 98.7 1.2E-08 4.2E-13 93.7 6.7 94 83-187 83-188 (236)
188 4hg2_A Methyltransferase type 98.7 5.4E-09 1.9E-13 97.8 4.3 89 83-183 41-132 (257)
189 2yxe_A Protein-L-isoaspartate 98.7 1.5E-08 5E-13 90.4 6.9 92 83-183 79-174 (215)
190 2i62_A Nicotinamide N-methyltr 98.7 1.9E-09 6.7E-14 98.6 0.9 101 84-185 59-197 (265)
191 2pbf_A Protein-L-isoaspartate 98.7 9.1E-09 3.1E-13 92.7 5.3 93 83-183 82-190 (227)
192 2dul_A N(2),N(2)-dimethylguano 98.7 2.5E-08 8.6E-13 98.4 8.6 94 83-184 49-162 (378)
193 2aot_A HMT, histamine N-methyl 98.7 6.1E-08 2.1E-12 91.1 10.7 120 60-183 19-169 (292)
194 3bgv_A MRNA CAP guanine-N7 met 98.7 3E-08 1E-12 94.0 8.7 100 83-183 36-152 (313)
195 3ccf_A Cyclopropane-fatty-acyl 98.7 1.7E-08 5.8E-13 94.0 6.7 90 83-183 59-151 (279)
196 2avn_A Ubiquinone/menaquinone 98.7 2.9E-08 9.8E-13 91.6 8.2 90 83-183 56-149 (260)
197 3tm4_A TRNA (guanine N2-)-meth 98.7 7E-08 2.4E-12 94.7 11.4 94 83-176 219-321 (373)
198 3e8s_A Putative SAM dependent 98.7 2.3E-08 7.9E-13 88.8 7.2 89 83-183 54-149 (227)
199 2gs9_A Hypothetical protein TT 98.7 2E-08 6.7E-13 89.2 6.8 89 83-183 38-129 (211)
200 3m6w_A RRNA methylase; rRNA me 98.7 1.7E-08 6E-13 102.1 7.2 104 83-188 103-231 (464)
201 3dli_A Methyltransferase; PSI- 98.7 1.2E-08 4E-13 92.9 5.2 89 83-183 43-137 (240)
202 3ckk_A TRNA (guanine-N(7)-)-me 98.7 4E-08 1.4E-12 90.4 8.8 100 83-183 48-165 (235)
203 1vbf_A 231AA long hypothetical 98.7 1.5E-08 5.1E-13 91.4 5.8 88 83-183 72-162 (231)
204 3m4x_A NOL1/NOP2/SUN family pr 98.7 2E-08 6.8E-13 101.5 6.5 106 83-189 107-237 (456)
205 2frx_A Hypothetical protein YE 98.7 4.8E-08 1.7E-12 99.2 9.1 106 83-189 119-249 (479)
206 3k0b_A Predicted N6-adenine-sp 98.6 4.2E-08 1.4E-12 97.2 8.2 52 104-155 264-315 (393)
207 3iv6_A Putative Zn-dependent a 98.6 1.4E-08 4.7E-13 95.5 4.4 90 83-183 47-145 (261)
208 3cvo_A Methyltransferase-like 98.6 3.1E-07 1.1E-11 83.2 12.7 96 83-186 32-154 (202)
209 1jg1_A PIMT;, protein-L-isoasp 98.6 3.8E-08 1.3E-12 89.5 6.8 90 83-183 93-186 (235)
210 2yxl_A PH0851 protein, 450AA l 98.6 1.3E-07 4.5E-12 95.0 10.5 105 83-188 261-391 (450)
211 1r18_A Protein-L-isoaspartate( 98.6 1.7E-08 5.8E-13 91.3 3.4 93 83-183 86-191 (227)
212 3ege_A Putative methyltransfer 98.6 4.7E-08 1.6E-12 90.3 6.2 99 70-181 19-125 (261)
213 3i9f_A Putative type 11 methyl 98.6 4.7E-08 1.6E-12 83.8 5.7 90 83-185 19-111 (170)
214 3giw_A Protein of unknown func 98.6 2.2E-07 7.5E-12 88.0 10.8 101 84-186 81-200 (277)
215 2qfm_A Spermine synthase; sper 98.6 3.8E-08 1.3E-12 96.5 5.3 119 72-191 174-319 (364)
216 1af7_A Chemotaxis receptor met 98.6 9.7E-08 3.3E-12 90.3 8.0 100 84-184 108-250 (274)
217 2xyq_A Putative 2'-O-methyl tr 98.6 1.6E-08 5.4E-13 96.5 2.5 103 66-183 43-168 (290)
218 2cmg_A Spermidine synthase; tr 98.6 1.8E-08 6.3E-13 94.4 2.6 92 83-185 74-170 (262)
219 3mq2_A 16S rRNA methyltransfer 98.6 3.3E-08 1.1E-12 88.4 4.1 100 83-184 29-138 (218)
220 3p2e_A 16S rRNA methylase; met 98.5 2E-08 6.8E-13 91.8 2.5 100 83-184 26-137 (225)
221 3htx_A HEN1; HEN1, small RNA m 98.5 2.3E-07 8E-12 99.2 10.9 116 67-184 703-833 (950)
222 1ne2_A Hypothetical protein TA 98.5 1.1E-07 3.6E-12 84.1 6.9 84 83-176 53-139 (200)
223 1zq9_A Probable dimethyladenos 98.5 3.4E-08 1.2E-12 93.4 3.9 70 83-155 30-101 (285)
224 3lst_A CALO1 methyltransferase 98.5 8.8E-08 3E-12 92.6 6.6 119 59-183 147-283 (348)
225 2jjq_A Uncharacterized RNA met 98.5 5.7E-07 2E-11 90.0 12.4 93 83-185 292-386 (425)
226 2g72_A Phenylethanolamine N-me 98.5 5.1E-08 1.7E-12 91.3 4.3 102 83-185 73-214 (289)
227 1p91_A Ribosomal RNA large sub 98.5 1.7E-07 5.8E-12 86.4 7.7 100 68-183 65-175 (269)
228 1vlm_A SAM-dependent methyltra 98.5 2E-07 6.9E-12 83.5 8.0 111 56-183 20-136 (219)
229 3q87_B N6 adenine specific DNA 98.5 2.8E-07 9.5E-12 80.0 7.8 87 83-183 25-120 (170)
230 2h1r_A Dimethyladenosine trans 98.5 8.4E-08 2.9E-12 91.4 4.6 70 83-156 44-115 (299)
231 3lcv_B Sisomicin-gentamicin re 98.5 1.2E-07 4.1E-12 89.2 5.4 110 83-195 134-247 (281)
232 3sso_A Methyltransferase; macr 98.5 1.1E-07 3.6E-12 94.7 5.1 110 62-184 190-322 (419)
233 3ldu_A Putative methylase; str 98.4 3.1E-07 1.1E-11 90.6 8.1 53 104-156 258-310 (385)
234 2f8l_A Hypothetical protein LM 98.4 2E-07 6.9E-12 90.0 6.3 101 84-186 133-259 (344)
235 2oxt_A Nucleoside-2'-O-methylt 98.4 7.5E-09 2.6E-13 97.3 -4.0 96 83-183 76-182 (265)
236 3cc8_A Putative methyltransfer 98.4 2.9E-07 1E-11 81.8 6.0 88 83-183 34-127 (230)
237 2wa2_A Non-structural protein 98.4 1.3E-08 4.5E-13 96.2 -3.4 95 84-183 85-190 (276)
238 2b9e_A NOL1/NOP2/SUN domain fa 98.4 1.8E-06 6E-11 82.9 11.1 104 83-188 104-236 (309)
239 3reo_A (ISO)eugenol O-methyltr 98.4 4.5E-07 1.5E-11 88.6 7.0 116 59-184 165-298 (368)
240 3v97_A Ribosomal RNA large sub 98.3 1.4E-06 4.6E-11 92.5 10.8 78 104-181 257-342 (703)
241 1sqg_A SUN protein, FMU protei 98.3 6.3E-07 2.1E-11 89.4 7.7 104 83-189 248-377 (429)
242 4a6d_A Hydroxyindole O-methylt 98.3 1.3E-06 4.6E-11 84.7 9.5 121 59-183 142-280 (353)
243 3dou_A Ribosomal RNA large sub 98.3 2.4E-07 8.2E-12 82.4 3.8 87 83-183 27-136 (191)
244 3hp7_A Hemolysin, putative; st 98.3 6.5E-07 2.2E-11 85.4 6.8 100 73-184 73-183 (291)
245 3bt7_A TRNA (uracil-5-)-methyl 98.3 6.7E-07 2.3E-11 87.4 7.1 90 83-183 215-323 (369)
246 1ej0_A FTSJ; methyltransferase 98.3 3.5E-07 1.2E-11 77.3 4.3 89 83-183 24-133 (180)
247 2r6z_A UPF0341 protein in RSP 98.3 2.1E-07 7.3E-12 87.0 3.0 72 83-156 85-170 (258)
248 2plw_A Ribosomal RNA methyltra 98.3 4.1E-07 1.4E-11 79.9 4.5 89 83-183 24-151 (201)
249 3p9c_A Caffeic acid O-methyltr 98.3 8.6E-07 2.9E-11 86.5 7.1 116 59-184 163-296 (364)
250 2ih2_A Modification methylase 98.3 4.2E-07 1.4E-11 89.3 4.1 94 83-186 41-167 (421)
251 1fp1_D Isoliquiritigenin 2'-O- 98.3 4.1E-07 1.4E-11 88.6 3.8 115 59-184 171-304 (372)
252 2p41_A Type II methyltransfera 98.2 2.5E-07 8.6E-12 88.6 2.0 93 83-183 84-188 (305)
253 1fp2_A Isoflavone O-methyltran 98.2 1.3E-06 4.3E-11 84.4 6.8 115 59-184 150-286 (352)
254 2okc_A Type I restriction enzy 98.2 1.7E-06 5.8E-11 86.6 7.7 104 83-186 173-310 (445)
255 1uwv_A 23S rRNA (uracil-5-)-me 98.2 3.9E-06 1.3E-10 83.8 10.3 91 83-182 288-385 (433)
256 3tqs_A Ribosomal RNA small sub 98.2 8.2E-07 2.8E-11 82.9 4.9 67 83-155 31-104 (255)
257 3gru_A Dimethyladenosine trans 98.2 1E-06 3.5E-11 84.1 5.3 68 83-155 52-122 (295)
258 3fut_A Dimethyladenosine trans 98.2 8.5E-07 2.9E-11 83.6 4.7 68 84-157 49-120 (271)
259 3frh_A 16S rRNA methylase; met 98.2 2.1E-06 7.3E-11 79.9 6.9 99 83-187 107-209 (253)
260 3opn_A Putative hemolysin; str 98.2 4.6E-07 1.6E-11 83.3 1.7 100 73-184 25-135 (232)
261 3o4f_A Spermidine synthase; am 98.1 9.2E-06 3.1E-10 77.5 9.4 107 84-191 86-203 (294)
262 2nyu_A Putative ribosomal RNA 98.1 7.8E-07 2.7E-11 77.7 1.6 89 83-183 24-142 (196)
263 1zg3_A Isoflavanone 4'-O-methy 98.1 4.9E-06 1.7E-10 80.4 7.2 115 59-183 153-290 (358)
264 3ll7_A Putative methyltransfer 98.1 3.3E-06 1.1E-10 84.2 5.9 70 83-155 95-171 (410)
265 1yub_A Ermam, rRNA methyltrans 98.0 1.1E-07 3.8E-12 87.5 -5.1 67 83-155 31-101 (245)
266 4e2x_A TCAB9; kijanose, tetron 98.0 1.2E-06 4.2E-11 86.2 2.2 91 84-183 110-205 (416)
267 4azs_A Methyltransferase WBDD; 98.0 8.2E-06 2.8E-10 84.2 8.4 67 84-153 69-140 (569)
268 3uzu_A Ribosomal RNA small sub 98.0 2.7E-06 9.4E-11 80.4 4.5 68 83-155 44-122 (279)
269 1qyr_A KSGA, high level kasuga 98.0 8.7E-07 3E-11 82.6 0.9 69 83-156 23-99 (252)
270 1m6y_A S-adenosyl-methyltransf 98.0 5.3E-06 1.8E-10 79.3 5.5 71 83-155 28-106 (301)
271 2zfu_A Nucleomethylin, cerebra 98.0 4.9E-06 1.7E-10 73.9 4.9 78 83-184 69-149 (215)
272 3ftd_A Dimethyladenosine trans 97.9 3.9E-06 1.3E-10 77.9 2.9 67 83-155 33-103 (249)
273 2ld4_A Anamorsin; methyltransf 97.9 2.3E-06 8E-11 73.8 0.7 81 83-184 14-99 (176)
274 1qam_A ERMC' methyltransferase 97.9 1.8E-05 6E-10 72.9 6.3 68 83-155 32-102 (244)
275 2oyr_A UPF0341 protein YHIQ; a 97.8 1.2E-05 4E-10 75.3 4.4 72 83-156 90-173 (258)
276 2qy6_A UPF0209 protein YFCK; s 97.7 4.6E-05 1.6E-09 71.2 6.3 97 84-183 63-210 (257)
277 2ar0_A M.ecoki, type I restric 97.6 5.3E-05 1.8E-09 78.0 6.6 104 83-186 171-315 (541)
278 3lkd_A Type I restriction-modi 97.6 0.00017 5.8E-09 74.2 10.4 104 84-187 224-362 (542)
279 3c6k_A Spermine synthase; sper 97.5 8.2E-05 2.8E-09 73.3 5.4 116 71-187 190-332 (381)
280 3khk_A Type I restriction-modi 97.4 0.00011 3.8E-09 75.7 4.9 104 84-187 247-399 (544)
281 3r24_A NSP16, 2'-O-methyl tran 97.3 0.00025 8.6E-09 67.4 6.2 105 66-183 89-214 (344)
282 2wk1_A NOVP; transferase, O-me 97.3 0.00032 1.1E-08 66.4 6.4 103 81-187 106-245 (282)
283 3s1s_A Restriction endonucleas 97.2 0.00031 1.1E-08 75.1 6.3 104 84-187 324-469 (878)
284 3p8z_A Mtase, non-structural p 96.9 0.00012 4.2E-09 67.6 -0.7 91 84-178 81-179 (267)
285 4fzv_A Putative methyltransfer 96.9 0.0019 6.4E-08 63.1 7.6 113 83-198 150-294 (359)
286 3lkz_A Non-structural protein 96.6 0.00079 2.7E-08 64.0 2.5 93 83-179 96-196 (321)
287 2zig_A TTHA0409, putative modi 96.6 0.005 1.7E-07 58.0 8.0 62 71-134 223-288 (297)
288 2oo3_A Protein involved in cat 96.5 0.0039 1.3E-07 58.9 6.5 105 70-182 80-194 (283)
289 2px2_A Genome polyprotein [con 96.4 0.00028 9.6E-09 65.9 -1.6 89 83-180 75-176 (269)
290 3evf_A RNA-directed RNA polyme 96.3 0.00046 1.6E-08 65.0 -1.2 97 84-184 77-182 (277)
291 1wg8_A Predicted S-adenosylmet 96.1 0.006 2.1E-07 57.7 5.6 65 83-154 24-96 (285)
292 3gcz_A Polyprotein; flavivirus 96.1 0.00048 1.6E-08 65.0 -2.1 95 84-183 93-198 (282)
293 1g60_A Adenine-specific methyl 95.5 0.019 6.5E-07 52.9 6.4 57 70-128 199-259 (260)
294 2k4m_A TR8_protein, UPF0146 pr 94.9 0.01 3.5E-07 50.9 2.1 78 75-174 27-112 (153)
295 3g7u_A Cytosine-specific methy 94.9 0.024 8.3E-07 55.4 5.1 63 84-153 4-77 (376)
296 1g55_A DNA cytosine methyltran 94.6 0.015 5.1E-07 56.1 2.9 63 84-153 4-74 (343)
297 3tka_A Ribosomal RNA small sub 94.6 0.028 9.7E-07 54.4 4.6 67 83-154 59-135 (347)
298 1i4w_A Mitochondrial replicati 94.4 0.037 1.3E-06 53.8 5.2 56 83-143 60-118 (353)
299 4auk_A Ribosomal RNA large sub 94.4 0.036 1.2E-06 54.3 5.1 80 84-179 214-296 (375)
300 3ufb_A Type I restriction-modi 94.4 0.089 3E-06 53.7 8.2 72 83-155 219-310 (530)
301 3eld_A Methyltransferase; flav 94.2 0.007 2.4E-07 57.5 -0.5 97 84-184 84-189 (300)
302 2py6_A Methyltransferase FKBM; 94.1 0.06 2.1E-06 53.1 5.9 59 84-142 229-294 (409)
303 2c7p_A Modification methylase 93.7 0.053 1.8E-06 52.0 4.7 61 84-153 13-77 (327)
304 3ubt_Y Modification methylase 92.8 0.16 5.5E-06 47.8 6.3 60 85-152 3-66 (331)
305 1rjd_A PPM1P, carboxy methyl t 92.6 0.3 1E-05 46.9 8.1 113 68-183 80-229 (334)
306 2qrv_A DNA (cytosine-5)-methyl 92.1 0.18 6.2E-06 47.6 5.7 64 84-153 18-89 (295)
307 1pl8_A Human sorbitol dehydrog 91.5 0.47 1.6E-05 45.2 8.0 117 49-185 140-272 (356)
308 1boo_A Protein (N-4 cytosine-s 91.4 0.029 9.9E-07 53.5 -0.7 74 72-149 241-318 (323)
309 3qv2_A 5-cytosine DNA methyltr 91.3 0.11 3.6E-06 49.9 3.1 63 84-153 12-82 (327)
310 3m6i_A L-arabinitol 4-dehydrog 91.1 0.1 3.5E-06 49.9 2.8 89 83-186 181-283 (363)
311 1f8f_A Benzyl alcohol dehydrog 90.9 0.051 1.7E-06 52.3 0.4 87 83-185 192-288 (371)
312 2uyo_A Hypothetical protein ML 90.8 1.1 3.7E-05 42.5 9.6 115 68-185 86-217 (310)
313 3fpc_A NADP-dependent alcohol 90.4 0.046 1.6E-06 52.2 -0.3 86 83-184 168-264 (352)
314 4h0n_A DNMT2; SAH binding, tra 89.8 0.18 6.2E-06 48.4 3.3 63 84-152 5-74 (333)
315 4ej6_A Putative zinc-binding d 89.2 0.3 1E-05 46.9 4.4 88 83-186 184-284 (370)
316 1kol_A Formaldehyde dehydrogen 88.6 0.33 1.1E-05 46.9 4.2 92 83-184 187-298 (398)
317 2dph_A Formaldehyde dismutase; 87.2 1.5 5E-05 42.4 7.9 93 83-185 187-298 (398)
318 2d8a_A PH0655, probable L-thre 87.1 0.15 5.1E-06 48.4 0.7 87 83-185 169-266 (348)
319 3pvc_A TRNA 5-methylaminomethy 87.1 0.5 1.7E-05 49.3 4.8 143 30-188 18-213 (689)
320 3uko_A Alcohol dehydrogenase c 87.0 0.9 3.1E-05 43.5 6.2 87 83-185 195-294 (378)
321 1p0f_A NADP-dependent alcohol 86.7 1.1 3.8E-05 42.7 6.7 87 83-185 193-292 (373)
322 1vj0_A Alcohol dehydrogenase, 86.7 0.83 2.8E-05 43.9 5.8 87 83-185 197-297 (380)
323 3tos_A CALS11; methyltransfera 86.5 0.5 1.7E-05 43.8 3.9 70 129-203 157-233 (257)
324 3ip1_A Alcohol dehydrogenase, 86.0 0.32 1.1E-05 47.3 2.5 90 83-187 215-319 (404)
325 2jhf_A Alcohol dehydrogenase E 85.7 1.4 4.7E-05 42.1 6.8 86 83-184 193-291 (374)
326 1e3i_A Alcohol dehydrogenase, 85.7 1.3 4.3E-05 42.4 6.5 87 83-185 197-296 (376)
327 1cdo_A Alcohol dehydrogenase; 85.5 1.3 4.6E-05 42.2 6.6 87 83-185 194-293 (374)
328 3vyw_A MNMC2; tRNA wobble urid 85.3 1.1 3.8E-05 42.6 5.8 139 29-183 56-223 (308)
329 2dq4_A L-threonine 3-dehydroge 84.9 0.085 2.9E-06 50.1 -2.2 85 83-185 166-261 (343)
330 3two_A Mannitol dehydrogenase; 84.9 0.87 3E-05 43.1 4.8 83 83-185 178-264 (348)
331 3jv7_A ADH-A; dehydrogenase, n 84.7 1.3 4.6E-05 41.6 6.1 88 83-186 173-270 (345)
332 1eg2_A Modification methylase 84.6 1.7 5.7E-05 41.3 6.7 55 70-126 229-290 (319)
333 2fzw_A Alcohol dehydrogenase c 84.5 1.3 4.6E-05 42.1 6.0 86 83-184 192-290 (373)
334 1e3j_A NADP(H)-dependent ketos 83.1 2.4 8.2E-05 40.0 7.1 116 49-185 137-270 (352)
335 4eez_A Alcohol dehydrogenase 1 82.9 3.5 0.00012 38.6 8.2 135 49-199 131-276 (348)
336 3me5_A Cytosine-specific methy 81.8 0.93 3.2E-05 45.7 3.8 55 85-143 91-147 (482)
337 4a2c_A Galactitol-1-phosphate 81.5 3.7 0.00013 38.3 7.8 86 83-184 162-258 (346)
338 3s2e_A Zinc-containing alcohol 80.7 0.74 2.5E-05 43.3 2.5 87 83-186 168-263 (340)
339 1uuf_A YAHK, zinc-type alcohol 79.4 0.89 3E-05 43.6 2.7 86 83-185 196-287 (369)
340 4dvj_A Putative zinc-dependent 79.4 4.4 0.00015 38.6 7.6 84 84-184 174-268 (363)
341 1m6e_X S-adenosyl-L-methionnin 77.7 2.9 0.0001 40.4 5.8 82 102-183 90-206 (359)
342 3fwz_A Inner membrane protein 77.5 3.7 0.00012 33.4 5.6 62 82-153 7-77 (140)
343 2b5w_A Glucose dehydrogenase; 77.1 2.3 7.8E-05 40.3 4.8 87 83-186 174-273 (357)
344 2h6e_A ADH-4, D-arabinose 1-de 77.1 1.7 5.9E-05 40.9 3.9 86 83-185 172-268 (344)
345 3fbg_A Putative arginate lyase 76.5 0.85 2.9E-05 43.1 1.5 83 83-183 152-245 (346)
346 1jvb_A NAD(H)-dependent alcoho 75.7 1.7 5.8E-05 41.0 3.4 86 83-184 172-269 (347)
347 3jyn_A Quinone oxidoreductase; 75.5 0.65 2.2E-05 43.5 0.4 87 83-187 142-240 (325)
348 3uog_A Alcohol dehydrogenase; 75.2 2.1 7.3E-05 40.7 4.0 84 83-184 191-285 (363)
349 4eye_A Probable oxidoreductase 74.4 0.61 2.1E-05 44.1 -0.1 85 83-186 161-257 (342)
350 3gms_A Putative NADPH:quinone 74.4 0.46 1.6E-05 44.8 -1.0 86 83-186 146-243 (340)
351 1pqw_A Polyketide synthase; ro 74.3 3.7 0.00013 35.0 5.0 85 83-185 40-136 (198)
352 3b5i_A S-adenosyl-L-methionine 72.7 2.4 8.2E-05 41.3 3.7 54 102-155 90-158 (374)
353 3swr_A DNA (cytosine-5)-methyl 71.8 3.5 0.00012 45.2 5.0 50 85-141 543-595 (1002)
354 3qwb_A Probable quinone oxidor 71.7 0.78 2.7E-05 43.1 -0.1 86 83-186 150-247 (334)
355 3goh_A Alcohol dehydrogenase, 71.6 3.3 0.00011 38.4 4.2 80 83-184 144-227 (315)
356 2dpo_A L-gulonate 3-dehydrogen 71.2 8.9 0.0003 36.2 7.2 93 84-184 8-121 (319)
357 2cdc_A Glucose dehydrogenase g 70.9 4.4 0.00015 38.4 5.1 83 83-185 182-277 (366)
358 2zb4_A Prostaglandin reductase 70.5 9.2 0.00031 35.9 7.2 86 83-184 162-258 (357)
359 1zcj_A Peroxisomal bifunctiona 69.3 9.8 0.00034 37.7 7.4 91 85-184 40-148 (463)
360 4dup_A Quinone oxidoreductase; 69.3 1 3.5E-05 42.7 0.2 84 83-185 169-264 (353)
361 1jw9_B Molybdopterin biosynthe 69.1 6.3 0.00022 35.7 5.5 70 83-153 32-127 (249)
362 2c0c_A Zinc binding alcohol de 68.7 9.2 0.00031 36.2 6.8 83 83-183 165-258 (362)
363 4dkj_A Cytosine-specific methy 68.1 3.2 0.00011 40.8 3.4 40 84-124 12-59 (403)
364 1qor_A Quinone oxidoreductase; 68.1 1.2 4.2E-05 41.5 0.4 85 83-185 142-238 (327)
365 4e12_A Diketoreductase; oxidor 68.0 5.2 0.00018 36.6 4.7 97 84-188 6-123 (283)
366 1piw_A Hypothetical zinc-type 67.5 1.3 4.5E-05 42.1 0.5 88 83-185 181-275 (360)
367 2hcy_A Alcohol dehydrogenase 1 67.5 8.5 0.00029 36.0 6.2 83 83-184 171-267 (347)
368 1rjw_A ADH-HT, alcohol dehydro 66.9 0.91 3.1E-05 42.8 -0.7 117 49-185 132-260 (339)
369 3ps9_A TRNA 5-methylaminomethy 66.9 7.6 0.00026 40.1 6.2 139 30-187 26-220 (676)
370 3nx4_A Putative oxidoreductase 66.6 8.1 0.00028 35.6 5.8 119 48-185 109-240 (324)
371 3mog_A Probable 3-hydroxybutyr 66.5 6.5 0.00022 39.4 5.4 97 84-189 7-123 (483)
372 3llv_A Exopolyphosphatase-rela 66.1 9.6 0.00033 30.4 5.5 60 84-153 8-76 (141)
373 2eih_A Alcohol dehydrogenase; 66.1 4.1 0.00014 38.2 3.7 85 83-185 168-264 (343)
374 2j3h_A NADP-dependent oxidored 65.6 15 0.00052 34.1 7.6 85 83-184 157-253 (345)
375 3ggo_A Prephenate dehydrogenas 64.7 17 0.00058 33.9 7.7 88 84-184 35-126 (314)
376 3krt_A Crotonyl COA reductase; 64.0 5.2 0.00018 39.3 4.1 85 83-185 230-343 (456)
377 4b7c_A Probable oxidoreductase 63.9 1.2 4E-05 41.8 -0.6 86 83-185 151-247 (336)
378 2zig_A TTHA0409, putative modi 63.9 3.3 0.00011 38.4 2.5 53 130-182 20-93 (297)
379 4fn4_A Short chain dehydrogena 63.4 18 0.00063 32.8 7.4 59 93-155 23-92 (254)
380 3ius_A Uncharacterized conserv 62.9 24 0.00082 31.3 8.1 95 84-190 7-107 (286)
381 1xg5_A ARPG836; short chain de 62.5 14 0.00048 33.1 6.5 60 93-154 48-118 (279)
382 1iz0_A Quinone oxidoreductase; 62.3 4 0.00014 37.5 2.8 82 83-184 127-216 (302)
383 3gaz_A Alcohol dehydrogenase s 62.2 1.6 5.3E-05 41.3 -0.1 82 83-185 152-245 (343)
384 3ojo_A CAP5O; rossmann fold, c 61.8 21 0.0007 35.3 8.0 88 87-184 16-127 (431)
385 1boo_A Protein (N-4 cytosine-s 61.0 6.4 0.00022 37.0 4.0 57 130-186 13-84 (323)
386 3l9w_A Glutathione-regulated p 60.7 12 0.0004 36.7 5.9 61 83-153 5-74 (413)
387 1yi9_A PAM, peptidyl-glycine a 60.2 18 0.0006 34.2 6.9 30 299-328 222-251 (309)
388 2j8z_A Quinone oxidoreductase; 59.3 2.3 8E-05 40.2 0.6 85 83-185 164-260 (354)
389 4ft4_B DNA (cytosine-5)-methyl 59.3 8.3 0.00028 40.7 4.9 39 84-122 214-259 (784)
390 1v3u_A Leukotriene B4 12- hydr 59.0 18 0.00063 33.4 6.8 85 83-184 147-242 (333)
391 3pi7_A NADH oxidoreductase; gr 58.6 1.5 5.2E-05 41.3 -0.9 79 89-185 173-262 (349)
392 1f0y_A HCDH, L-3-hydroxyacyl-C 58.6 19 0.00063 33.0 6.7 94 84-185 17-135 (302)
393 3ado_A Lambda-crystallin; L-gu 58.4 9.1 0.00031 36.3 4.5 103 84-194 8-131 (319)
394 2efj_A 3,7-dimethylxanthine me 57.9 15 0.00051 35.7 6.1 15 169-183 208-222 (384)
395 3av4_A DNA (cytosine-5)-methyl 57.0 14 0.00046 41.8 6.2 50 84-140 853-905 (1330)
396 4a0s_A Octenoyl-COA reductase/ 56.5 19 0.00066 34.9 6.7 88 83-186 222-336 (447)
397 1yqd_A Sinapyl alcohol dehydro 56.3 6.6 0.00022 37.3 3.2 87 83-185 189-281 (366)
398 2cf5_A Atccad5, CAD, cinnamyl 55.9 4.6 0.00016 38.2 2.0 87 83-185 182-274 (357)
399 1yb5_A Quinone oxidoreductase; 55.7 7.5 0.00026 36.7 3.5 86 83-186 172-269 (351)
400 2f1k_A Prephenate dehydrogenas 55.7 35 0.0012 30.4 8.0 82 87-185 5-90 (279)
401 2vhw_A Alanine dehydrogenase; 54.1 12 0.00039 36.1 4.5 92 85-186 171-268 (377)
402 1zsy_A Mitochondrial 2-enoyl t 52.9 23 0.00078 33.2 6.4 120 49-185 134-269 (357)
403 3k6j_A Protein F01G10.3, confi 52.2 50 0.0017 32.8 8.9 95 85-188 57-168 (460)
404 3grp_A 3-oxoacyl-(acyl carrier 52.2 18 0.00063 32.4 5.4 90 49-154 2-108 (266)
405 2wtb_A MFP2, fatty acid multif 52.2 29 0.00098 36.5 7.6 88 88-184 318-425 (725)
406 1wly_A CAAR, 2-haloacrylate re 52.2 15 0.00051 34.0 4.9 84 84-185 148-243 (333)
407 1pjc_A Protein (L-alanine dehy 51.7 18 0.00062 34.4 5.5 94 84-187 169-268 (361)
408 3tqh_A Quinone oxidoreductase; 51.6 15 0.0005 34.0 4.7 112 49-183 120-242 (321)
409 3pxx_A Carveol dehydrogenase; 50.0 95 0.0033 27.4 9.9 58 93-154 26-106 (287)
410 1xa0_A Putative NADPH dependen 49.9 17 0.0006 33.4 4.9 84 84-185 152-245 (328)
411 3zwc_A Peroxisomal bifunctiona 49.4 44 0.0015 35.3 8.4 100 87-195 321-438 (742)
412 1eg2_A Modification methylase 49.3 13 0.00045 35.0 4.0 60 128-187 35-107 (319)
413 3ucx_A Short chain dehydrogena 48.8 56 0.0019 28.9 8.1 59 93-155 27-96 (264)
414 2hwk_A Helicase NSP2; rossman 48.8 8.7 0.0003 36.2 2.5 78 93-183 155-251 (320)
415 3c85_A Putative glutathione-re 48.4 18 0.00061 30.3 4.4 61 83-153 40-111 (183)
416 4f3n_A Uncharacterized ACR, CO 48.3 18 0.00063 35.7 5.0 91 63-159 111-220 (432)
417 4g81_D Putative hexonate dehyd 48.2 40 0.0014 30.5 7.0 59 93-155 25-94 (255)
418 1lss_A TRK system potassium up 47.4 39 0.0013 26.2 6.1 60 85-153 7-75 (140)
419 1id1_A Putative potassium chan 47.3 38 0.0013 27.3 6.2 63 84-153 5-77 (153)
420 3rku_A Oxidoreductase YMR226C; 47.2 53 0.0018 29.7 7.8 62 93-154 49-122 (287)
421 2g5c_A Prephenate dehydrogenas 47.2 57 0.002 29.1 7.9 86 85-184 4-94 (281)
422 3ic5_A Putative saccharopine d 46.8 29 0.00099 26.0 5.1 61 84-153 7-75 (118)
423 4fgs_A Probable dehydrogenase 45.8 18 0.00061 33.3 4.2 77 72-155 18-111 (273)
424 3h7a_A Short chain dehydrogena 45.7 30 0.001 30.6 5.7 58 93-154 23-90 (252)
425 3l4b_C TRKA K+ channel protien 45.5 28 0.00096 30.0 5.3 60 85-153 3-71 (218)
426 1iy8_A Levodione reductase; ox 45.4 38 0.0013 30.0 6.3 60 93-154 29-99 (267)
427 1zej_A HBD-9, 3-hydroxyacyl-CO 45.0 49 0.0017 30.7 7.2 62 84-153 14-79 (293)
428 1tt7_A YHFP; alcohol dehydroge 44.5 21 0.00071 32.9 4.5 83 84-185 153-246 (330)
429 3lyl_A 3-oxoacyl-(acyl-carrier 44.4 69 0.0024 27.7 7.8 58 93-154 21-89 (247)
430 1wdk_A Fatty oxidation complex 44.3 34 0.0012 35.9 6.5 91 86-185 318-428 (715)
431 2eez_A Alanine dehydrogenase; 44.3 27 0.00093 33.2 5.4 92 85-186 169-266 (369)
432 3b1f_A Putative prephenate deh 44.0 75 0.0026 28.4 8.2 86 84-183 8-98 (290)
433 1fmc_A 7 alpha-hydroxysteroid 43.8 38 0.0013 29.3 6.0 58 93-154 27-95 (255)
434 4egf_A L-xylulose reductase; s 43.7 36 0.0012 30.3 5.9 59 93-154 36-105 (266)
435 1g60_A Adenine-specific methyl 43.6 7.9 0.00027 35.0 1.4 52 132-183 5-71 (260)
436 3rkr_A Short chain oxidoreduct 43.3 53 0.0018 29.0 7.0 58 93-154 45-113 (262)
437 3g0o_A 3-hydroxyisobutyrate de 43.1 25 0.00086 32.2 4.9 86 84-185 9-101 (303)
438 3kzv_A Uncharacterized oxidore 42.9 38 0.0013 29.8 5.9 57 93-154 18-85 (254)
439 3ijr_A Oxidoreductase, short c 42.9 1.2E+02 0.0042 27.1 9.6 58 93-154 63-132 (291)
440 4e21_A 6-phosphogluconate dehy 42.7 21 0.00071 34.1 4.3 86 84-185 24-114 (358)
441 3gaf_A 7-alpha-hydroxysteroid 42.6 46 0.0016 29.4 6.4 58 93-154 28-96 (256)
442 1yb1_A 17-beta-hydroxysteroid 42.5 65 0.0022 28.5 7.5 58 93-154 47-115 (272)
443 3t4x_A Oxidoreductase, short c 42.3 64 0.0022 28.6 7.4 60 93-154 26-92 (267)
444 3gqv_A Enoyl reductase; medium 42.3 70 0.0024 30.0 8.0 85 83-185 166-262 (371)
445 1gu7_A Enoyl-[acyl-carrier-pro 41.9 21 0.00072 33.4 4.2 88 83-184 169-273 (364)
446 3lf2_A Short chain oxidoreduct 41.8 53 0.0018 29.1 6.7 60 93-154 24-94 (265)
447 2ae2_A Protein (tropinone redu 41.5 53 0.0018 28.9 6.6 58 93-154 25-94 (260)
448 3iei_A Leucine carboxyl methyl 41.2 1E+02 0.0034 29.2 8.8 114 68-183 72-226 (334)
449 3h5n_A MCCB protein; ubiquitin 41.1 80 0.0027 29.9 8.2 74 78-153 113-214 (353)
450 2vn8_A Reticulon-4-interacting 40.7 37 0.0013 32.0 5.7 86 83-185 185-279 (375)
451 1zud_1 Adenylyltransferase THI 40.7 31 0.0011 31.0 4.9 68 84-153 30-124 (251)
452 1ae1_A Tropinone reductase-I; 40.6 58 0.002 29.0 6.8 58 93-154 37-106 (273)
453 3svt_A Short-chain type dehydr 40.1 63 0.0022 28.8 7.0 60 93-154 27-98 (281)
454 2jah_A Clavulanic acid dehydro 39.8 53 0.0018 28.7 6.3 58 93-154 23-91 (247)
455 1h2b_A Alcohol dehydrogenase; 39.4 4.9 0.00017 38.0 -0.7 84 83-185 188-284 (359)
456 2nwq_A Probable short-chain de 39.3 79 0.0027 28.2 7.6 57 93-154 37-104 (272)
457 3sju_A Keto reductase; short-c 39.2 59 0.002 29.1 6.6 58 93-154 40-108 (279)
458 2iz1_A 6-phosphogluconate dehy 39.1 49 0.0017 32.6 6.5 90 85-185 8-102 (474)
459 3d1l_A Putative NADP oxidoredu 38.7 67 0.0023 28.3 6.9 88 84-187 12-103 (266)
460 3grk_A Enoyl-(acyl-carrier-pro 38.7 79 0.0027 28.6 7.5 57 93-154 49-116 (293)
461 2zyd_A 6-phosphogluconate dehy 38.6 53 0.0018 32.6 6.7 91 84-185 17-112 (480)
462 3v8b_A Putative dehydrogenase, 38.1 40 0.0014 30.4 5.3 58 93-154 44-112 (283)
463 3o8q_A Shikimate 5-dehydrogena 38.1 1.2E+02 0.0039 27.8 8.5 78 69-154 109-194 (281)
464 3h8v_A Ubiquitin-like modifier 38.1 67 0.0023 29.8 6.9 69 84-153 38-143 (292)
465 4g65_A TRK system potassium up 38.1 38 0.0013 33.4 5.5 62 85-153 6-74 (461)
466 2rhc_B Actinorhodin polyketide 37.9 85 0.0029 27.9 7.5 58 93-154 38-106 (277)
467 3dfz_A SIRC, precorrin-2 dehyd 37.5 30 0.001 30.9 4.3 61 84-153 33-97 (223)
468 4imr_A 3-oxoacyl-(acyl-carrier 37.2 55 0.0019 29.4 6.1 58 93-154 49-116 (275)
469 3tjr_A Short chain dehydrogena 36.7 70 0.0024 29.0 6.8 58 93-154 47-115 (301)
470 1geg_A Acetoin reductase; SDR 36.7 94 0.0032 27.1 7.5 58 93-154 18-86 (256)
471 3nzo_A UDP-N-acetylglucosamine 36.4 96 0.0033 29.4 8.0 79 74-153 26-118 (399)
472 3gt0_A Pyrroline-5-carboxylate 36.2 35 0.0012 30.1 4.6 84 85-183 5-94 (247)
473 1zem_A Xylitol dehydrogenase; 36.1 62 0.0021 28.5 6.2 58 93-154 23-91 (262)
474 3gg2_A Sugar dehydrogenase, UD 35.8 1.2E+02 0.0041 29.7 8.7 96 85-186 5-122 (450)
475 2gn4_A FLAA1 protein, UDP-GLCN 35.2 74 0.0025 29.4 6.8 64 85-153 24-97 (344)
476 4ibo_A Gluconate dehydrogenase 34.6 54 0.0018 29.3 5.6 58 93-154 42-110 (271)
477 3gvc_A Oxidoreductase, probabl 34.5 71 0.0024 28.7 6.4 55 93-154 45-110 (277)
478 3pk0_A Short-chain dehydrogena 34.4 65 0.0022 28.5 6.1 59 93-154 26-95 (262)
479 4g65_A TRK system potassium up 33.9 35 0.0012 33.7 4.4 64 84-153 237-306 (461)
480 4fs3_A Enoyl-[acyl-carrier-pro 33.9 69 0.0024 28.4 6.2 59 93-154 24-93 (256)
481 2b4q_A Rhamnolipids biosynthes 33.7 60 0.0021 29.0 5.7 57 93-154 45-112 (276)
482 1xq1_A Putative tropinone redu 33.3 90 0.0031 27.2 6.8 58 93-154 30-99 (266)
483 2wgn_B Inhibitor of cysteine p 33.1 37 0.0013 27.9 3.8 31 310-343 35-65 (132)
484 2v6b_A L-LDH, L-lactate dehydr 32.9 1.9E+02 0.0065 26.4 9.2 65 86-153 4-73 (304)
485 3cxt_A Dehydrogenase with diff 32.9 90 0.0031 28.2 6.9 58 93-154 50-118 (291)
486 3t7c_A Carveol dehydrogenase; 32.7 92 0.0032 28.1 6.9 58 93-154 44-124 (299)
487 1wma_A Carbonyl reductase [NAD 32.7 53 0.0018 28.6 5.1 58 93-154 20-89 (276)
488 2cvz_A Dehydrogenase, 3-hydrox 32.6 52 0.0018 29.3 5.1 82 86-186 5-90 (289)
489 4da9_A Short-chain dehydrogena 32.3 1E+02 0.0035 27.5 7.1 58 93-154 45-114 (280)
490 3uve_A Carveol dehydrogenase ( 32.1 93 0.0032 27.7 6.8 58 93-154 27-111 (286)
491 3c24_A Putative oxidoreductase 31.8 1.3E+02 0.0044 26.9 7.7 82 84-184 13-99 (286)
492 1w6u_A 2,4-dienoyl-COA reducta 31.8 84 0.0029 28.0 6.4 59 93-154 42-111 (302)
493 3qiv_A Short-chain dehydrogena 31.8 1.1E+02 0.0038 26.4 7.1 58 93-154 25-93 (253)
494 3r1i_A Short-chain type dehydr 31.7 50 0.0017 29.6 4.8 58 93-154 48-116 (276)
495 4eso_A Putative oxidoreductase 31.6 51 0.0017 29.1 4.8 55 93-154 24-89 (255)
496 3g79_A NDP-N-acetyl-D-galactos 31.2 1E+02 0.0035 30.6 7.4 107 84-200 20-158 (478)
497 3sx2_A Putative 3-ketoacyl-(ac 30.8 82 0.0028 27.9 6.1 58 93-154 29-109 (278)
498 2xxj_A L-LDH, L-lactate dehydr 30.8 2.9E+02 0.0099 25.3 10.1 64 87-153 5-73 (310)
499 2h78_A Hibadh, 3-hydroxyisobut 30.7 35 0.0012 30.9 3.7 84 85-185 6-96 (302)
500 1y1p_A ARII, aldehyde reductas 30.6 1.8E+02 0.006 26.0 8.5 58 93-153 27-89 (342)
No 1
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=100.00 E-value=1.2e-87 Score=701.70 Aligned_cols=308 Identities=51% Similarity=0.876 Sum_probs=281.8
Q ss_pred CCCCcHHHHhhhcccccccCCCCCCCCCceeecccchhhhcccccCCCCCccccCcHHHHHHHhcCcccHHHHHHHHHHh
Q 039233 1 MDPLPEQERFELSYRDFLQSPLQGHNPLFHIISDEFCTIEFSNYYLSFQPLMDNLEAQTYETFEKDSVKYIQYQRAIGNA 80 (359)
Q Consensus 1 ~~~~~~~~~~~~~y~d~lq~pl~~~~~~~~~~~~~~~~~~~~~~~~~~qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~ 80 (359)
+|+++.+|.|+.||+||||+|| |||+|||+|+|||+||||++||++|++||.+|
T Consensus 291 ~~~~~~~e~~~~~y~D~Lq~PL--------------------------QPl~dnL~s~tYevFEkD~vKy~~Ye~AI~~A 344 (637)
T 4gqb_A 291 RPPPNAYELFAKGYEDYLQSPL--------------------------QPLMDNLESQTYEVFEKDPIKYSQYQQAIYKC 344 (637)
T ss_dssp SCCCCHHHHHSTTCBTCCBEEC--------------------------CTTTSCCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHhcccccccccCcC--------------------------cchhhhhhhhhhhhhcCChhhHHHHHHHHHHH
Confidence 5889999999999999999999 99999999999999999999999999999999
Q ss_pred hcc------------cCCcCChhH--HHHHHHHcCC----CCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc
Q 039233 81 LVD------------RVPDEEASS--LTTAAEETGR----KLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW 142 (359)
Q Consensus 81 ~~d------------~v~D~g~Gt--l~~~A~~aga----~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~ 142 (359)
++| .|+|+|||+ |+++|.+||+ +++|||||+||+|. .|+++++.|+|+++|+||+||||++
T Consensus 345 l~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~~~dkVtVI~gd~eev 423 (637)
T 4gqb_A 345 LLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEEWGSQVTVVSSDMREW 423 (637)
T ss_dssp HHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHTTGGGEEEEESCTTTC
T ss_pred HHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhccCCCeEEEEeCcceec
Confidence 854 278999998 7666665554 35899999999655 6788889999999999999999999
Q ss_pred cCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccceeeeeccchhhhhhhhcccccccCcchhhhhhhh
Q 039233 143 DAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHNDVIPCLCAQVSPLEAISFSSK 222 (359)
Q Consensus 143 ~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~~~~~~~~~~~~~~~~~~fs~~ 222 (359)
++|+|||||||||||+||++|+++|||++++|+|||||++||+++++|++|++++++|+++.. .|...
T Consensus 424 ~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiPs~atlyiapi~~~~l~~e~~~---~~~~~--------- 491 (637)
T 4gqb_A 424 VAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVRA---CREKD--------- 491 (637)
T ss_dssp CCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEESCEEEEEEEEEECHHHHHHHHT---TCCTT---------
T ss_pred cCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEccccceEEEEEecCHHHHHHHHh---ccccc---------
Confidence 999999999999999999999999999999999999999999999999999999999998753 22111
Q ss_pred hhhhhhhccccccccccceEEEEecCceecCCCceeEEeecCCCCccccccceEEEEEEeeeCCCCceeEEEEEee----
Q 039233 223 CALALQVKSHKDVVHFETAYVVKVHSVARLAPCEPVFTFTHPNFSTKKSNQRYKKLRFEIPSDTGSSMVHGIFVSF---- 298 (359)
Q Consensus 223 ~~~~~~~~~~~~~~~~e~pyV~~~~~~~~Ls~p~~~f~F~~~~~~~~~~~~r~~~l~F~i~~~g~~~~vhGfag~F---- 298 (359)
+.....|++|||+.+++...|++|+++|+|+|++.....+++|...++|++.++| ++|||+|||
T Consensus 492 ---------~~~~~~~~~p~Vv~~~~~~~Ls~p~~~~~fd~~~~~~~~~~~~~~~~~f~i~~~g---~vhGf~~wFD~~f 559 (637)
T 4gqb_A 492 ---------RDPEAQFEMPYVVRLHNFHQLSAPQPCFTFSHPNRDPMIDNNRYCTLEFPVEVNT---VLHGFAGYFETVL 559 (637)
T ss_dssp ---------SCTTGGGGSCEECBCCSCEECSCCEEEEEEESSCCSTTCCCCEEEEEEEECCSCE---EEEEEEEEEEEEE
T ss_pred ---------ccchhhcCCcEEEEecCccccCCCEEEEEEECCCCCccccceEEEEEEEEecCCc---EEEEEEEEEEEEe
Confidence 1123458899999999999999999999999999876678889999999999887 999999999
Q ss_pred -----------------cccceeeeecCCeEEecCCCeEEEEEEeeeCCCeEEEEEEEecCCCCccccCCCceEEecC
Q 039233 299 -----------------LFRFAIFFPLRTPVCIRPGSPLEVHFWRCCGSTKVWYEWCVASPNPSPVHNSNGRSYWVGL 359 (359)
Q Consensus 299 -----------------tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~~~~~VWyeW~~~~p~~~~i~n~~G~~y~~~l 359 (359)
|||+|++|||++|+.|++||+|+++|||++|+++|||||+++.|..++|||+|||+|+|||
T Consensus 560 ~~~V~LST~P~~~s~~~THW~Q~vfpL~~Pl~V~~Gd~I~~~~~R~~d~~kVWYEW~v~~p~~s~ihN~~Gr~y~i~l 637 (637)
T 4gqb_A 560 YQDITLSIRPETHSPGMFSWFPILFPIKQPITVREGQTICVRFWRCSNSKKVWYEWAVTAPVCSAIHNPTGRSYTIGL 637 (637)
T ss_dssp ETTEEEECSGGGCCTTCCSCCCEEEEEEEEEEECTTCEEEEEEEEEECSSEEEEEEEEEESSCCCCBSGGGSSCCEEC
T ss_pred eCCeEEECCCCCCCCCCCcccCeEEEeCCCeEECCCCEEEEEEEEEeCCCceeEEEEEeCCcCccccCCCCceeeecC
Confidence 7999999999999999999999999999999999999999999999999999999999998
No 2
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=100.00 E-value=2e-85 Score=684.36 Aligned_cols=322 Identities=37% Similarity=0.626 Sum_probs=268.0
Q ss_pred CCcHHH-HhhhcccccccCCCCCCCCCceeecccchhhhcccccCCCCCccccCcHHHHHHHhcCcccHHHHHHHHHHhh
Q 039233 3 PLPEQE-RFELSYRDFLQSPLQGHNPLFHIISDEFCTIEFSNYYLSFQPLMDNLEAQTYETFEKDSVKYIQYQRAIGNAL 81 (359)
Q Consensus 3 ~~~~~~-~~~~~y~d~lq~pl~~~~~~~~~~~~~~~~~~~~~~~~~~qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~~ 81 (359)
|++++| .|+.+|+||||+|| |||+|||+|+|||+||+|++||++|++||.+++
T Consensus 347 ~~~~~e~~~~~~y~D~LQ~PL--------------------------QPL~dNLes~tYe~fekD~vRy~~Y~~AI~~al 400 (745)
T 3ua3_A 347 SNDSTHYLNVIEYKDVLQAPL--------------------------QPLSENLDSGVYNTFEQDQIKYDVYGEAVVGAL 400 (745)
T ss_dssp ---------------CEECCC--------------------------CTTTSCCCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCchhhhhcccCccccccCCC--------------------------CcchhccchHHHHHHcCChhhHHHHHHHHHHHH
Confidence 678888 99999999999999 999999999999999999999999999999998
Q ss_pred cc---------cCCcCChhH--HHHHHHH----cC---------CCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC
Q 039233 82 VD---------RVPDEEASS--LTTAAEE----TG---------RKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC 137 (359)
Q Consensus 82 ~d---------~v~D~g~Gt--l~~~A~~----ag---------a~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~ 137 (359)
+| .|+|+|||+ |+++|.+ || .+.+|||||+|++|+.+++.+++ |+|+++|+||++
T Consensus 401 ~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~g 479 (745)
T 3ua3_A 401 KDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIES 479 (745)
T ss_dssp HHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEES
T ss_pred HHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeC
Confidence 65 389999998 7654433 44 44599999999999988887776 899999999999
Q ss_pred ccccccC------CCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccceeeeeccchhhhhhhhccccccc
Q 039233 138 DMRCWDA------PEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHNDVIPCLCAQV 211 (359)
Q Consensus 138 d~~~~~~------p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~~~~~~~~~~~ 211 (359)
|||++++ ++|||||||||||+||++|+++|||++++|+|||||++||++|++|++||+++++|+++... +.
T Consensus 480 d~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP~~~t~ylaPi~~~~l~~~v~~~---~~ 556 (745)
T 3ua3_A 480 DMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIPQKYTSYVKPIMSTHIHQTIKAQ---SI 556 (745)
T ss_dssp CGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEESCEEEEEEEEEECHHHHHHHHTC---CC
T ss_pred chhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEECCccEEEEEEecCHHHHHHHHhh---cc
Confidence 9999998 89999999999999999999999999999999999999999999999999999999998542 21
Q ss_pred Ccchhhhhhhhhhhhhhh-c---------cccccccccceEEEEecCceecCC-CceeEEeecCCCCccccccceEEEEE
Q 039233 212 SPLEAISFSSKCALALQV-K---------SHKDVVHFETAYVVKVHSVARLAP-CEPVFTFTHPNFSTKKSNQRYKKLRF 280 (359)
Q Consensus 212 ~~~~~~~fs~~~~~~~~~-~---------~~~~~~~~e~pyV~~~~~~~~Ls~-p~~~f~F~~~~~~~~~~~~r~~~l~F 280 (359)
..+ ..+|++.+...++. . +..+..+|++|||+.++++.+|++ |+++|+|+||+.. +.+++|+..++|
T Consensus 557 ~~~-~~G~p~~g~~~P~~~~~g~~i~~~~~~~~~~a~e~PyVv~l~~~~~Ls~~pq~vftFdhp~~~-~~d~~r~~~~~F 634 (745)
T 3ua3_A 557 PYL-SRAIPSHGRGEPELDEDEMWIQKYPQGHVRNNMDQIYVVYLSKYIPLAETTKPVFTFEHPNFM-NSSNERSDSIEF 634 (745)
T ss_dssp CGG-GTTSCCSSSCCCEECTTSCEECCCTTCHHHHHHSSCEEECCCSCEESSSSCEEEEEEESSCTT-CCCSCEEEEEEE
T ss_pred ccc-ccccccccccccccccccccccccccccccccccccEEEeeccceecCCCCceEEEEECCCCC-ccccceeEEEEE
Confidence 100 00121111111000 0 001335689999999999999999 9999999999975 678999999999
Q ss_pred EeeeCCCCceeEEEEEee---------------------cccceeeeecCCeEEecCCCeEEEEEEeeeCCCeEEEEEEE
Q 039233 281 EIPSDTGSSMVHGIFVSF---------------------LFRFAIFFPLRTPVCIRPGSPLEVHFWRCCGSTKVWYEWCV 339 (359)
Q Consensus 281 ~i~~~g~~~~vhGfag~F---------------------tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~~~~~VWyeW~~ 339 (359)
++.++| .+|||+||| |||||+||||++|+.|++|++|+++|||++|+++|||||++
T Consensus 635 ~~~r~g---~iHGfagwFDi~Lyk~V~LST~P~t~s~~mThWfQtfFPL~ePL~V~~GdeI~g~~~R~~d~~kVWYEW~v 711 (745)
T 3ua3_A 635 VMDRNA---DLMGFAGYFDLQLYKTVMLSIEPSTHTPGMVSWFPAVIPLRDQLRVGEGDRISLKIDRKVDNTGVWYEWHV 711 (745)
T ss_dssp ECCSSE---EEEEEEEEEEEEEETTEEEECSSTTCCTTCCSCCCEEEEEEEEEEECTTCEEEEEEEEEEETTEEEEEEEE
T ss_pred EeCCCc---EEEEEEEEEEEEecCCcEEecCCCCCCCCCccceeEEEecCCceEeCCCCEEEEEEEEEcCCCCEEEEEEE
Confidence 999987 999999999 79999999999999999999999999999999999999999
Q ss_pred e------cCCCCccccCCCceEEecC
Q 039233 340 A------SPNPSPVHNSNGRSYWVGL 359 (359)
Q Consensus 340 ~------~p~~~~i~n~~G~~y~~~l 359 (359)
+ .|.+++|||+|||||+||.
T Consensus 712 ~~~~~~g~p~~~~ihN~~G~sy~~~~ 737 (745)
T 3ua3_A 712 EKKKTNGESVSTPIQNPNGESYYMRM 737 (745)
T ss_dssp EEECTTSCEEECCCBSGGGSSCCEEC
T ss_pred EeccCCCCccccccCCCCCcEEeecc
Confidence 9 9999999999999999984
No 3
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=100.00 E-value=3.7e-52 Score=412.30 Aligned_cols=283 Identities=19% Similarity=0.228 Sum_probs=223.4
Q ss_pred ecccchhhhcccccCCCCCccccCcHHHHHHHhcCcccHHHHHHHHHHhh---cc-cCCcCChhH--HHHHHHHcCCCCe
Q 039233 32 ISDEFCTIEFSNYYLSFQPLMDNLEAQTYETFEKDSVKYIQYQRAIGNAL---VD-RVPDEEASS--LTTAAEETGRKLK 105 (359)
Q Consensus 32 ~~~~~~~~~~~~~~~~~qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~~---~d-~v~D~g~Gt--l~~~A~~aga~~~ 105 (359)
.++|-++-||.||.- -..++.|++|.+|+.+|++||.++. ++ +|||+|||| |+++|+++||+ +
T Consensus 40 ~~~~~d~~Yf~sY~~----------~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~-~ 108 (376)
T 4hc4_A 40 TKRERDQLYYECYSD----------VSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGAR-R 108 (376)
T ss_dssp ---------CCCHHH----------HHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCS-E
T ss_pred ccccchhhhhhhccC----------cHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCC-E
Confidence 457888889988821 2468999999999999999998764 44 589999998 99999999999 9
Q ss_pred EEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccCCCC-ChHHHHHHHhhccCCCeEEEc
Q 039233 106 IYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFGDNE-LSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 106 V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~~~E-l~~e~L~~a~r~Lkp~Gi~IP 184 (359)
|||||.|+ ++..|+++++.|+++++|+++++|++++++|+++|+|||||||+++.+| .+++++.+++|+|||||++||
T Consensus 109 V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 109 VYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp EEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 99999997 6789999999999999999999999999999999999999999999888 567788888999999999999
Q ss_pred cccceeeeeccchhhhhhhhcccccc--c---CcchhhhhhhhhhhhhhhccccccccccceEEEEecCceecCCCceeE
Q 039233 185 SSYTSFIQPVTASKLHNDVIPCLCAQ--V---SPLEAISFSSKCALALQVKSHKDVVHFETAYVVKVHSVARLAPCEPVF 259 (359)
Q Consensus 185 ~~~t~~~~pi~s~~l~~~~~~~~~~~--~---~~~~~~~fs~~~~~~~~~~~~~~~~~~e~pyV~~~~~~~~Ls~p~~~f 259 (359)
+++++|++||+++.++..+. +| + +|+ ++.|....... ......+|+|..+.+..+|++|+.++
T Consensus 188 ~~atly~apie~~~l~~~i~----~w~~v~~~yGf-----d~s~~~~~~~~---~~~~~~e~~v~~~~~~~~Ls~p~~i~ 255 (376)
T 4hc4_A 188 ASAELFIVPISDQMLEWRLG----FWSQVKQHYGV-----DMSCLEGFATR---CLMGHSEIVVQGLSGEDVLARPQRFA 255 (376)
T ss_dssp CEEEEEEEEECCHHHHHHHH----GGGGHHHHHSC-----CCGGGHHHHHH---HHHSSCEEEEECCCGGGBCSCCEEEE
T ss_pred ccceEEEEEeccchhhhhhc----chhccccccCc-----Cchhhhhhhhh---hhcccCceEEEeecccccccCCEEEE
Confidence 99999999999988866542 23 1 332 22221111000 11234679999999999999999999
Q ss_pred EeecCCCCcc--ccccceEEEEEEeeeCCCCceeEEEEEee-----------------------cccceeeeecCCeEEe
Q 039233 260 TFTHPNFSTK--KSNQRYKKLRFEIPSDTGSSMVHGIFVSF-----------------------LFRFAIFFPLRTPVCI 314 (359)
Q Consensus 260 ~F~~~~~~~~--~~~~r~~~l~F~i~~~g~~~~vhGfag~F-----------------------tsW~q~~fpl~~Pi~V 314 (359)
+||+.+.... .+..+...++|++.++| .+|||++|| |||+|++|||++|+.|
T Consensus 256 ~~D~~~~~~~~~~~~~~~~~f~~~~~~~g---~vhg~~~WFd~~f~~~~~~~~v~lST~P~~~~THW~Q~v~~L~~Pi~V 332 (376)
T 4hc4_A 256 QLELSRAGLEQELEAGVGGRFRCSCYGSA---PMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQV 332 (376)
T ss_dssp EEETTCTTHHHHHHHCEEEEEEEECCSSE---EEEEEEEEEEEEECCCC--CCEEEECCTTSCCCTTCEEEEEEEEEEEE
T ss_pred EEECCCCCccccccccceeEEEEEecCCc---EEEEEEEEEEEEecCCCCCCceEEeCCCCcCCCceeeEEEEeCCceEe
Confidence 9999875321 12345566778888776 999999999 8999999999999999
Q ss_pred cCCCeEEEEEEeee--CCC---eEEEEEEEec
Q 039233 315 RPGSPLEVHFWRCC--GST---KVWYEWCVAS 341 (359)
Q Consensus 315 ~~G~~i~~~~~R~~--~~~---~VWyeW~~~~ 341 (359)
++||+|++++.... ++. .|.++|.+..
T Consensus 333 ~~G~~I~g~i~~~~~~~n~R~~~i~i~~~~~~ 364 (376)
T 4hc4_A 333 EQDTDVSGEITLLPSRDNPRRLRVLLRYKVGD 364 (376)
T ss_dssp CTTCEEEEEEEEEECSSCTTSEEEEEEEEETT
T ss_pred CCCCEEEEEEEEEECCCCCceeEEEEEEEeCC
Confidence 99999997766433 332 5888998865
No 4
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=100.00 E-value=1.6e-39 Score=318.25 Aligned_cols=275 Identities=16% Similarity=0.186 Sum_probs=226.2
Q ss_pred HHHHHhcCcccHHHHHHHHHHhh---c-ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeE
Q 039233 59 TYETFEKDSVKYIQYQRAIGNAL---V-DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTV 132 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~~~---~-d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V 132 (359)
.++.|++|.+|+..|+++|.++. + .+|||+|||+ ++++++++|++ +|+|||.|+ ++..|+++++.+++.++|
T Consensus 40 ~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~-~v~gvD~s~-~l~~a~~~~~~~~~~~~v 117 (349)
T 3q7e_A 40 IHEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAR-KVIGIECSS-ISDYAVKIVKANKLDHVV 117 (349)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCS-EEEEEECST-HHHHHHHHHHHTTCTTTE
T ss_pred HHHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCC-EEEEECcHH-HHHHHHHHHHHcCCCCcE
Confidence 46789999999999999998753 2 3699999998 78888888876 999999995 999999999999999999
Q ss_pred EEEeCccccccCC-CCccEEEeccccccCCCC-ChHHHHHHHhhccCCCeEEEccccceeeeeccchhhhhhhhcccccc
Q 039233 133 TIVSCDMRCWDAP-EKADILVSELLGSFGDNE-LSPECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHNDVIPCLCAQ 210 (359)
Q Consensus 133 ~vi~~d~~~~~~p-~k~DiIVSEllGs~~~~E-l~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~~~~~~~~~~ 210 (359)
+++++|++++.++ +++|+|||+++|+++..+ ....+|..+.++|||||++||+.++.+++|+.++.++.+... .|
T Consensus 118 ~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~---~w 194 (349)
T 3q7e_A 118 TIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIH---WW 194 (349)
T ss_dssp EEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHHHHHTG---GG
T ss_pred EEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccceEEEeeecChhhhhhhhc---cc
Confidence 9999999999876 899999999999977444 456677888999999999999999999999999988765432 34
Q ss_pred --cCcchhhhhhhhhhhhhhhccccccccccceEEEEecCceecCCCceeEEeecCCCCccccccceEEEEEEeeeCCCC
Q 039233 211 --VSPLEAISFSSKCALALQVKSHKDVVHFETAYVVKVHSVARLAPCEPVFTFTHPNFSTKKSNQRYKKLRFEIPSDTGS 288 (359)
Q Consensus 211 --~~~~~~~~fs~~~~~~~~~~~~~~~~~~e~pyV~~~~~~~~Ls~p~~~f~F~~~~~~~~~~~~r~~~l~F~i~~~g~~ 288 (359)
++|++ +++. ....+++|+|..+++..++++|+.+++|++.+.. ..++.+...++|++.++|
T Consensus 195 ~~~~G~d---~~~~-----------~~~~~~~p~v~~~~~~~~~~~~~~~~~~dl~~~~-~~~l~~~~~~~~~~~~~~-- 257 (349)
T 3q7e_A 195 ENVYGFD---MSCI-----------KDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVK-VEDLTFTSPFCLQVKRND-- 257 (349)
T ss_dssp GCBTTBC---CGGG-----------HHHHHTSCEEECCCGGGEEEEEEEEEEEETTTCC-GGGGSEEEEEEEEBCSSE--
T ss_pred ccccCcc---hHHH-----------hHhhhcCcEEEEEChhhEecccEEEEEEEcccCc-hhhcceeeeEEEEEccCC--
Confidence 34432 1111 1234778999999999999999999999999874 556778888999999887
Q ss_pred ceeEEEEEee---------------------cccceeeeecCCeEEecCCCeEEEEEEeeeCC---CeEEEEEEEecCC-
Q 039233 289 SMVHGIFVSF---------------------LFRFAIFFPLRTPVCIRPGSPLEVHFWRCCGS---TKVWYEWCVASPN- 343 (359)
Q Consensus 289 ~~vhGfag~F---------------------tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~~~---~~VWyeW~~~~p~- 343 (359)
.+|||++|| |||+|++|||++|+.|++|++|+++++++.+. +.+++++.+....
T Consensus 258 -~~~g~~~~Fd~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~ 336 (349)
T 3q7e_A 258 -YVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRDLDFTIDLDFKGQ 336 (349)
T ss_dssp -EEEEEEEEEEEECTTSSSCCEEECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCSSCEEEEEEEEEECS
T ss_pred -EEEEEEEEEEEEecCCCCccEEECCCCcCCCcceeEEEEECCceEeCCCCEEEEEEEEEECCCCCeeEEEEEEEEeCCc
Confidence 999999999 99999999999999999999999998875543 5688887775432
Q ss_pred CCccccCCCceEEec
Q 039233 344 PSPVHNSNGRSYWVG 358 (359)
Q Consensus 344 ~~~i~n~~G~~y~~~ 358 (359)
...+ .++.+|.|+
T Consensus 337 ~~~~--~~~~~~~~~ 349 (349)
T 3q7e_A 337 LCEL--SCSTDYRMR 349 (349)
T ss_dssp SCEE--EEEEEEEEC
T ss_pred cccc--ccCceEecC
Confidence 2222 456677663
No 5
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=100.00 E-value=2.1e-38 Score=307.74 Aligned_cols=250 Identities=17% Similarity=0.224 Sum_probs=209.9
Q ss_pred HHHHHHhcCcccHHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCe
Q 039233 58 QTYETFEKDSVKYIQYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKT 131 (359)
Q Consensus 58 ~~Ye~f~~D~vry~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~ 131 (359)
..++.|++|++|+.+|++||.+++. .+|+|+|||+ ++++++++|++ +|+|||.|+ ++..|+++++.+++.++
T Consensus 11 ~~~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~-~v~~vD~s~-~~~~a~~~~~~~~~~~~ 88 (328)
T 1g6q_1 11 GIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAK-HVIGVDMSS-IIEMAKELVELNGFSDK 88 (328)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCS-EEEEEESST-HHHHHHHHHHHTTCTTT
T ss_pred hHHHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCC-EEEEEChHH-HHHHHHHHHHHcCCCCC
Confidence 4578999999999999999987653 3699999998 88888888876 999999995 89999999999999999
Q ss_pred EEEEeCccccccCC-CCccEEEeccccccCCCCCh-HHHHHHHhhccCCCeEEEccccceeeeeccchhhhhhhhccccc
Q 039233 132 VTIVSCDMRCWDAP-EKADILVSELLGSFGDNELS-PECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHNDVIPCLCA 209 (359)
Q Consensus 132 V~vi~~d~~~~~~p-~k~DiIVSEllGs~~~~El~-~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~~~~~~~~~ 209 (359)
|+++++|++++.++ +++|+||||++++++.++.. ..+|..+.++|||||++||+.+++|++++.++.++.+... .
T Consensus 89 i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~---~ 165 (328)
T 1g6q_1 89 ITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLAGLEDSQYKDEKLN---Y 165 (328)
T ss_dssp EEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHHHHHHH---H
T ss_pred EEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEeeceEEEEEecCchhhhhhhc---c
Confidence 99999999999877 79999999999987766544 5677888999999999999999999999999877654321 2
Q ss_pred c--cCcchhhhhhhhhhhhhhhccccccccccceEEEEecCceecCCCceeEEeecCCCCccccccceEEEEEEeeeCCC
Q 039233 210 Q--VSPLEAISFSSKCALALQVKSHKDVVHFETAYVVKVHSVARLAPCEPVFTFTHPNFSTKKSNQRYKKLRFEIPSDTG 287 (359)
Q Consensus 210 ~--~~~~~~~~fs~~~~~~~~~~~~~~~~~~e~pyV~~~~~~~~Ls~p~~~f~F~~~~~~~~~~~~r~~~l~F~i~~~g~ 287 (359)
| .+++ +..+. .....++|+|..++...+|++|+.+++||+.+.. ..++.+...++|++.++|
T Consensus 166 w~~~~gf-----~~~~~---------~~~~~~~~~v~~~~~~~~ls~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~g- 229 (328)
T 1g6q_1 166 WQDVYGF-----DYSPF---------VPLVLHEPIVDTVERNNVNTTSDKLIEFDLNTVK-ISDLAFKSNFKLTAKRQD- 229 (328)
T ss_dssp TTCBTTB-----CCTTH---------HHHHTTSCEEECCCGGGBCBCCEEEEEEETTTCC-GGGGSEEEEEEEEBCSSC-
T ss_pred cccccCc-----ChHHH---------hhhhhcCCeEEEeccceeecCCEEEEEEECCCCC-hhHhceeeeEEEEEecCc-
Confidence 3 2332 11110 1123578999999999999999999999999874 455677888999999887
Q ss_pred CceeEEEEEee-----------------------cccceeeeecCCeEEecCCCeEEEEEEeeeCC
Q 039233 288 SSMVHGIFVSF-----------------------LFRFAIFFPLRTPVCIRPGSPLEVHFWRCCGS 330 (359)
Q Consensus 288 ~~~vhGfag~F-----------------------tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~~~ 330 (359)
.+|||++|| |||+|++|||++|+.|++|++|+++++...+.
T Consensus 230 --~~~g~~~wfd~~~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~ 293 (328)
T 1g6q_1 230 --MINGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQTIFYFPDDLDAETGDTIEGELVCSPNE 293 (328)
T ss_dssp --EEEEEEEEEEEECCCCTTSCCCEEECSTTSCCCTTCEEEEEEEEEEECCTTCEEEEEEEEEEET
T ss_pred --EEEEEEEEEEEEcCCCCCCCceEEECCCCcCCCcceeEEEEeCCceecCCCCEEEEEEEEEECC
Confidence 999999999 89999999999999999999999988766543
No 6
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=100.00 E-value=9.1e-38 Score=304.93 Aligned_cols=262 Identities=19% Similarity=0.206 Sum_probs=217.1
Q ss_pred HHHHHHHhcCcccHHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC
Q 039233 57 AQTYETFEKDSVKYIQYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEK 130 (359)
Q Consensus 57 s~~Ye~f~~D~vry~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~ 130 (359)
...++.|++|.+|+..|+++|.+++. .+|||+|||+ ++++++++|++ +|+|||.|+ +++.|+++++.+++++
T Consensus 36 ~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~-~v~gvD~s~-~~~~a~~~~~~~~~~~ 113 (340)
T 2fyt_A 36 YGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAK-KVLGVDQSE-ILYQAMDIIRLNKLED 113 (340)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCS-EEEEEESST-HHHHHHHHHHHTTCTT
T ss_pred hhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCC-EEEEEChHH-HHHHHHHHHHHcCCCC
Confidence 35678899999999999999998753 3699999998 78888888876 999999997 8999999999999988
Q ss_pred eEEEEeCccccccCC-CCccEEEeccccccCCCCCh-HHHHHHHhhccCCCeEEEccccceeeeeccchhhhhhhhcccc
Q 039233 131 TVTIVSCDMRCWDAP-EKADILVSELLGSFGDNELS-PECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHNDVIPCLC 208 (359)
Q Consensus 131 ~V~vi~~d~~~~~~p-~k~DiIVSEllGs~~~~El~-~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~~~~~~~~ 208 (359)
+|+++++|++++.++ +++|+|||+++++++.++.. .++|..+.++|||||++||+.++.+++++.+..++.+...
T Consensus 114 ~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~~~~~~--- 190 (340)
T 2fyt_A 114 TITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNKHADRIA--- 190 (340)
T ss_dssp TEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHHHHHTG---
T ss_pred cEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcccceEEEEEecchhHhhhhhc---
Confidence 999999999999876 78999999999988866654 5688888999999999999999999999999887655422
Q ss_pred cc--cCcchhhhhhhhhhhhhhhccccccccccceEEEEecCceecCCCceeEEeecCCCCccccccceEEEEEEeeeCC
Q 039233 209 AQ--VSPLEAISFSSKCALALQVKSHKDVVHFETAYVVKVHSVARLAPCEPVFTFTHPNFSTKKSNQRYKKLRFEIPSDT 286 (359)
Q Consensus 209 ~~--~~~~~~~~fs~~~~~~~~~~~~~~~~~~e~pyV~~~~~~~~Ls~p~~~f~F~~~~~~~~~~~~r~~~l~F~i~~~g 286 (359)
.| .++++ ..+ .....+++|+|..+....++++|..+++|++.+.. ..+..+...+.|++.++|
T Consensus 191 ~w~~~~g~~-----~~~---------~~~~~~~~~~v~~~~~~~~ls~p~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~~ 255 (340)
T 2fyt_A 191 FWDDVYGFK-----MSC---------MKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTTS-ISDLEFSSDFTLKITRTS 255 (340)
T ss_dssp GGGCBTTBC-----CGG---------GHHHHTTBCEEECCCGGGBCBCCEEEEEEETTTCC-GGGGSEEEEEEEEBCSCE
T ss_pred ccccccCcC-----hHH---------HHHhhhcCcEEEEechhhcccCCEEEEEEECCCCc-ccccceEeeEEEEEccCc
Confidence 23 33321 111 01124778999988888999999999999998764 345567778899999887
Q ss_pred CCceeEEEEEee----------------------cccceeeeecCCeEEecCCCeEEEEEEeeeCC-CeEEEEEEEec
Q 039233 287 GSSMVHGIFVSF----------------------LFRFAIFFPLRTPVCIRPGSPLEVHFWRCCGS-TKVWYEWCVAS 341 (359)
Q Consensus 287 ~~~~vhGfag~F----------------------tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~~~-~~VWyeW~~~~ 341 (359)
.+|||++|| |||+|++|||++|+.|++|++|+++++++.+. ..-++++.++-
T Consensus 256 ---~~~g~~~wfd~~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~ 330 (340)
T 2fyt_A 256 ---MCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFSVKAGEALKGKVTVHKNKKDPRSLTVTLTL 330 (340)
T ss_dssp ---EEEEEEEEEEEEECTTCSSCEEEECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCTTSEEEEEEE
T ss_pred ---EEEEEEEEEEEEeecCCCCCEEEECCCCcCCCccccEEEEeCCceEcCCCCEEEEEEEEEECCCCCceEEEEEEE
Confidence 999999999 89999999999999999999999999988774 33455666654
No 7
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=100.00 E-value=8e-37 Score=298.79 Aligned_cols=271 Identities=20% Similarity=0.217 Sum_probs=209.1
Q ss_pred HHHHHhcCcccHHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeE
Q 039233 59 TYETFEKDSVKYIQYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTV 132 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V 132 (359)
.++.|++|.+|+..|.++|.+.+. .+|||+|||+ ++++++++|++ +|+|||.|+ ++..|+++++.++++++|
T Consensus 24 ~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~-~V~~vD~s~-~~~~a~~~~~~~~l~~~v 101 (348)
T 2y1w_A 24 QQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGAR-KIYAVEAST-MAQHAEVLVKSNNLTDRI 101 (348)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCS-EEEEEECST-HHHHHHHHHHHTTCTTTE
T ss_pred HHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCC-EEEEECCHH-HHHHHHHHHHHcCCCCcE
Confidence 356789999999999999998874 3689999998 88888888876 999999997 778999999999998899
Q ss_pred EEEeCccccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccceeeeeccchhhhhhhhcccccccC
Q 039233 133 TIVSCDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHNDVIPCLCAQVS 212 (359)
Q Consensus 133 ~vi~~d~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~~~~~~~~~~~~ 212 (359)
+++++|++++.+++++|+|||++++..+.++...+++..+.++|||||+++|+.++.+++|+.+..++.+......+|..
T Consensus 102 ~~~~~d~~~~~~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~~~~~~w~~ 181 (348)
T 2y1w_A 102 VVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQ 181 (348)
T ss_dssp EEEESCTTTCCCSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHGGGCC
T ss_pred EEEEcchhhCCCCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhccccCcccc
Confidence 99999999998889999999999999888888888999899999999999999999999999999887543211122311
Q ss_pred -cchhhhhhhhhhhhhhhccccccccccceEEEEecCceecCCCceeEEeecCCCCcccccc-ceEEEEEEeeeCCCCce
Q 039233 213 -PLEAISFSSKCALALQVKSHKDVVHFETAYVVKVHSVARLAPCEPVFTFTHPNFSTKKSNQ-RYKKLRFEIPSDTGSSM 290 (359)
Q Consensus 213 -~~~~~~fs~~~~~~~~~~~~~~~~~~e~pyV~~~~~~~~Ls~p~~~f~F~~~~~~~~~~~~-r~~~l~F~i~~~g~~~~ 290 (359)
.+...+++..... .....|..|++...+.....+.+. ...+++.+.. ..+.. +...++|++.++| +
T Consensus 182 ~~~~g~d~~~l~~~-------~~~~~f~~p~~d~~~~~~~~~~~~-~~~~df~~~~-~~~~~~~~~~~~~~~~~~g---~ 249 (348)
T 2y1w_A 182 PSFHGVDLSALRGA-------AVDEYFRQPVVDTFDIRILMAKSV-KYTVNFLEAK-EGDLHRIEIPFKFHMLHSG---L 249 (348)
T ss_dssp SCBTTBCCGGGHHH-------HHHHHHTSCEEECCCGGGBCBCCE-EEEEETTTCC-GGGGSEEEEEEEEEBSSCE---E
T ss_pred cccCcccHHHhhhH-------HHhhhccCCeEEeECCeeecCcce-EEEEECCcCC-hHHhceeeeeEEEEEccCc---E
Confidence 1111112221111 112347788887655433333332 2334444332 22333 4567889998887 9
Q ss_pred eEEEEEee---------------------cccceeeeecCCeEEecCCCeEEEEEEeeeC---CCeEEEEEEEecCC
Q 039233 291 VHGIFVSF---------------------LFRFAIFFPLRTPVCIRPGSPLEVHFWRCCG---STKVWYEWCVASPN 343 (359)
Q Consensus 291 vhGfag~F---------------------tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~~---~~~VWyeW~~~~p~ 343 (359)
+|||++|| |||+|++|||++|+.|++|++|+++++++.+ ...||++|.+..+.
T Consensus 250 ~~g~~~wfd~~~~~~~~~v~lSt~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (348)
T 2y1w_A 250 VHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQTG 326 (348)
T ss_dssp EEEEEEEEEEEEECSSCEEEEECCTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECTTSSEEEEEEEEETTTC
T ss_pred EEEEEEEEEEEEcCCCCceEEECCCCcCCCeeeeEEEeeCCceEeCCCCEEEEEEEEEECCCCCcEEEEEEEEcccc
Confidence 99999999 9999999999999999999999999987754 36799999987653
No 8
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=100.00 E-value=3.5e-36 Score=297.44 Aligned_cols=271 Identities=17% Similarity=0.188 Sum_probs=211.0
Q ss_pred HHHHhcCcccHHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEE
Q 039233 60 YETFEKDSVKYIQYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVT 133 (359)
Q Consensus 60 Ye~f~~D~vry~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~ 133 (359)
++.|++|..|+..|+++|.+++. .+|||+|||+ ++++++++|++ +|+|||.| .|++.|+++++.+++.++|+
T Consensus 38 ~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~-~V~gvD~s-~~~~~a~~~~~~~~~~~~v~ 115 (376)
T 3r0q_C 38 QKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGAR-KVYAVEAT-KMADHARALVKANNLDHIVE 115 (376)
T ss_dssp HHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCS-EEEEEESS-TTHHHHHHHHHHTTCTTTEE
T ss_pred HHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCC-EEEEEccH-HHHHHHHHHHHHcCCCCeEE
Confidence 46789999999999999987653 3689999998 88888888877 99999999 89999999999999999999
Q ss_pred EEeCccccccCCCCccEEEeccccccCCCCChHH-HHHHHhhccCCCeEEEccccceeeeeccchhhhhhhh-------c
Q 039233 134 IVSCDMRCWDAPEKADILVSELLGSFGDNELSPE-CLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHNDVI-------P 205 (359)
Q Consensus 134 vi~~d~~~~~~p~k~DiIVSEllGs~~~~El~~e-~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~~~~-------~ 205 (359)
++++|++++.+++++|+||||++++++..|...+ +|..+.++|||||++||+.++.|++|+.++.+..... .
T Consensus 116 ~~~~d~~~~~~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (376)
T 3r0q_C 116 VIEGSVEDISLPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFDGAMAD 195 (376)
T ss_dssp EEESCGGGCCCSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHHHHHHHHHHHHHH
T ss_pred EEECchhhcCcCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHhhhhhhhhhhhhh
Confidence 9999999999889999999999999987776554 6777789999999999999999999999875532211 0
Q ss_pred ccccc-----cCcchhhhhhhhhhhhhhhccccccccccceEEEEecCceecCCCceeEEeecCCCCccccccceEEEEE
Q 039233 206 CLCAQ-----VSPLEAISFSSKCALALQVKSHKDVVHFETAYVVKVHSVARLAPCEPVFTFTHPNFSTKKSNQRYKKLRF 280 (359)
Q Consensus 206 ~~~~~-----~~~~~~~~fs~~~~~~~~~~~~~~~~~~e~pyV~~~~~~~~Ls~p~~~f~F~~~~~~~~~~~~r~~~l~F 280 (359)
...+| .+|++ ++...... ........+.+|++..+.+..++++|+.+++|++.+...+....+...++|
T Consensus 196 W~~fw~~~~~~~G~d---~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~lt~~~~~~~~d~~~~~~~~l~~~~~~~~~ 269 (376)
T 3r0q_C 196 WHNFSDEIKSYYGVD---MGVLTKPF---AEEQEKYYIQTAMWNDLNPQQIIGTPTIVKEMDCLTASVSEIEEVRSNVTS 269 (376)
T ss_dssp HHHHHHHHHHSTTCC---CGGGHHHH---HHHHHHHHTSBCEEECCCGGGBCBCCEEEEEEETTTCCGGGTSEEEEEEEE
T ss_pred hhhhhhccCccccCC---hHHHHhhh---hhhhhhhcccCceEEEEChHHccCCCeEEEEEEcCcCCHHHhcccccceEE
Confidence 00112 33332 11110000 000000135789999999999999999999999988642221225567788
Q ss_pred Ee-eeCCCCceeEEEEEee---------------------------cccceeeeecCCeEEecCCCeEEEEEEeeeCC--
Q 039233 281 EI-PSDTGSSMVHGIFVSF---------------------------LFRFAIFFPLRTPVCIRPGSPLEVHFWRCCGS-- 330 (359)
Q Consensus 281 ~i-~~~g~~~~vhGfag~F---------------------------tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~~~-- 330 (359)
++ .++| .+|||++|| |||+|++|||++|+.|++|++|++++.++.+.
T Consensus 270 ~~~~~~~---~~~g~~~wfd~~~~~~~~~~~~~~v~lSt~P~~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~ 346 (376)
T 3r0q_C 270 VINMEHT---RLCGFGGWFDVQFSGRKEDPAQQEIELTTAPSEQHCTHWGQQVFIMSNPINVEEGDNLNLGLLMSRSKEN 346 (376)
T ss_dssp BCSCSCE---EEEEEEEEEEEEEEEETTEEEEEEEEEECCCCSSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSC
T ss_pred EEeccCc---eEEEEEEEEEEEecCCccCCCCCccEEECCCCcCCCCceeeEEEEECCceecCCCCEEEEEEEEEECCCC
Confidence 88 7776 999999999 89999999999999999999999887655443
Q ss_pred ---CeEEEEEEEec
Q 039233 331 ---TKVWYEWCVAS 341 (359)
Q Consensus 331 ---~~VWyeW~~~~ 341 (359)
..|-.+|.+..
T Consensus 347 ~r~~~~~~~~~~~~ 360 (376)
T 3r0q_C 347 HRLMEIELNCEIKE 360 (376)
T ss_dssp TTSEEEEEEEEEEC
T ss_pred CeeEEEEEEEEecC
Confidence 24667777764
No 9
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=100.00 E-value=2e-35 Score=301.09 Aligned_cols=266 Identities=21% Similarity=0.224 Sum_probs=207.9
Q ss_pred HHHHhcCcccHHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEE
Q 039233 60 YETFEKDSVKYIQYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVT 133 (359)
Q Consensus 60 Ye~f~~D~vry~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~ 133 (359)
.+.|++|..+++.|.++|.+.+. .+|+|+|||+ +++++++.|+. +|+|||.|+ +++.|+++++.+++.++|+
T Consensus 133 ~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~-~V~gvD~s~-~l~~A~~~~~~~gl~~~v~ 210 (480)
T 3b3j_A 133 QQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGAR-KIYAVEAST-MAQHAEVLVKSNNLTDRIV 210 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCS-EEEEEECHH-HHHHHHHHHHHTTCTTTEE
T ss_pred chhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCC-EEEEEEcHH-HHHHHHHHHHHcCCCCcEE
Confidence 45688999999999999998764 3689999998 77787888766 999999999 8899999999999999999
Q ss_pred EEeCccccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccceeeeeccchhhhhhhhcccccc---
Q 039233 134 IVSCDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHNDVIPCLCAQ--- 210 (359)
Q Consensus 134 vi~~d~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~~~~~~~~~~--- 210 (359)
++++|++++.+++++|+|||+.++++...+...+++..+.++|||||+++|+.++.+++|+.++.++.+......+|
T Consensus 211 ~~~~d~~~~~~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~ 290 (480)
T 3b3j_A 211 VIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQP 290 (480)
T ss_dssp EEESCTTTCCCSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHHHHHSS
T ss_pred EEECchhhCccCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHHhhccCccccc
Confidence 99999999888889999999999988777777778888899999999999999999999999998875431111122
Q ss_pred -cCcchhhhhhhhhhhhhhhccccccccccceEEEEecCceecCCCceeEEeecCCCCccccccc-eEEEEEEeeeCCCC
Q 039233 211 -VSPLEAISFSSKCALALQVKSHKDVVHFETAYVVKVHSVARLAPCEPVFTFTHPNFSTKKSNQR-YKKLRFEIPSDTGS 288 (359)
Q Consensus 211 -~~~~~~~~fs~~~~~~~~~~~~~~~~~~e~pyV~~~~~~~~Ls~p~~~f~F~~~~~~~~~~~~r-~~~l~F~i~~~g~~ 288 (359)
+.+. +++..... .....|..|++...+.....+.+.. ..+++.... ..++.+ ...++|++.++|
T Consensus 291 ~~~g~---dl~~l~~~-------~~~~~f~~pvvd~~~~~~~y~~tl~-~~~d~~~~~-~~~l~~~~~~~~~~~~~~g-- 356 (480)
T 3b3j_A 291 SFHGV---DLSALRGA-------AVDEYFRQPVVDTFDIRILMAKSVK-YTVNFLEAK-EGDLHRIEIPFKFHMLHSG-- 356 (480)
T ss_dssp CBTTB---CCGGGHHH-------HHHHHTTSCEECCCCSTTBCSCCEE-EEEETTTCC-TTTTTEEEEEEEEECSSCE--
T ss_pred cCCCc---ChhhhhhH-------HHHhccCCcEEEEeecccccchhhh-hhhhhhcCC-hhhhcceeeeEEEEEccCc--
Confidence 1221 11221110 1123477788776554444555433 455655432 234443 467888888887
Q ss_pred ceeEEEEEee---------------------cccceeeeecCCeEEecCCCeEEEEEEeeeC---CCeEEEEEEEecC
Q 039233 289 SMVHGIFVSF---------------------LFRFAIFFPLRTPVCIRPGSPLEVHFWRCCG---STKVWYEWCVASP 342 (359)
Q Consensus 289 ~~vhGfag~F---------------------tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~~---~~~VWyeW~~~~p 342 (359)
.+|||++|| |||+|++|||++|+.|++|++|++++++..+ .++|||+|.++.+
T Consensus 357 -~~hg~~~wFd~~~~~~~~~v~lST~P~~~~thW~q~~~~l~~p~~v~~g~~i~g~~~~~~~~~~~~~v~~~~~~~~~ 433 (480)
T 3b3j_A 357 -LVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQT 433 (480)
T ss_dssp -EEEEEEEEEEEEEECSSCEEESSSCCSSSCCCSEEEEEEEEEEEEECTTCEEEEEEEEEECTTSSEEEEEEEEETTT
T ss_pred -EEEEEEEEEEEEEcCCCCceEEeCCCCcCCCeeeeEEEEeCCceEeCCCCEEEEEEEEEECCCCCcEEEEEEEEccC
Confidence 999999999 9999999999999999999999999998754 5789999999764
No 10
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.41 E-value=5.2e-13 Score=126.92 Aligned_cols=102 Identities=21% Similarity=0.216 Sum_probs=86.7
Q ss_pred HHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCcc
Q 039233 74 QRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKAD 149 (359)
Q Consensus 74 ~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~D 149 (359)
++.|...++ ++|+|+|||+ ++..|++.|++ +|+|+|+||.|++.|++|++.|+++++|+++++|.+++....++|
T Consensus 116 r~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~~-~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D 194 (278)
T 3k6r_A 116 RVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIAD 194 (278)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTTTTHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEE
T ss_pred HHHHHHhcCCCCEEEEecCcCcHHHHHHHHhcCC-eEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCC
Confidence 445655565 4799999988 77777777876 999999999999999999999999999999999999998778999
Q ss_pred EEEeccccccCCCCChHHHHHHHhhccCCCeEE
Q 039233 150 ILVSELLGSFGDNELSPECLDGAQRFLKQDGIS 182 (359)
Q Consensus 150 iIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~ 182 (359)
.||+.+..+ +.+.|+.|.+.||+||++
T Consensus 195 ~Vi~~~p~~------~~~~l~~a~~~lk~gG~i 221 (278)
T 3k6r_A 195 RILMGYVVR------THEFIPKALSIAKDGAII 221 (278)
T ss_dssp EEEECCCSS------GGGGHHHHHHHEEEEEEE
T ss_pred EEEECCCCc------HHHHHHHHHHHcCCCCEE
Confidence 999765543 456888899999999986
No 11
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.29 E-value=9.2e-12 Score=117.42 Aligned_cols=105 Identities=20% Similarity=0.186 Sum_probs=87.2
Q ss_pred HHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCcc
Q 039233 74 QRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKAD 149 (359)
Q Consensus 74 ~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~D 149 (359)
++.+...++ ++|+|+|||+ ++..+++.|++ +|+|||.|+.|++.|+++++.|++.++++++++|++++...+++|
T Consensus 116 ~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD 194 (278)
T 2frn_A 116 RVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIAD 194 (278)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEE
T ss_pred HHHHHHhCCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCcc
Confidence 344555554 4799999998 77777777777 899999999999999999999999999999999999987778999
Q ss_pred EEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 150 ILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 150 iIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+|++.... ...+.+..+.+.|||||+++=.
T Consensus 195 ~Vi~~~p~------~~~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 195 RILMGYVV------RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp EEEECCCS------SGGGGHHHHHHHEEEEEEEEEE
T ss_pred EEEECCch------hHHHHHHHHHHHCCCCeEEEEE
Confidence 99986542 2356888899999999998743
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.29 E-value=7.7e-12 Score=117.32 Aligned_cols=126 Identities=19% Similarity=0.194 Sum_probs=90.0
Q ss_pred HHHHHHhcCccc-HHHHHHHHHHh----hc--ccCCcCChhH--HHH-HHHHcC-CCCeEEEEeCCHHHHHHHHHHHHhc
Q 039233 58 QTYETFEKDSVK-YIQYQRAIGNA----LV--DRVPDEEASS--LTT-AAEETG-RKLKIYAVEKNPNAVVTLHSLVRLE 126 (359)
Q Consensus 58 ~~Ye~f~~D~vr-y~~Y~~AI~~~----~~--d~v~D~g~Gt--l~~-~A~~ag-a~~~V~AVE~n~~a~~~a~~~~~~n 126 (359)
..|+.|++-.++ |..-.+.|... ++ .+|+|+|||+ ++. +|.+.+ ...+|+|||.|+.|++.|+++++..
T Consensus 40 ~~fdd~i~rsvP~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~ 119 (261)
T 4gek_A 40 EVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY 119 (261)
T ss_dssp HHHHHHHHHHSTTHHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS
T ss_pred hhhhhhHhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 346666655454 44444444322 33 3799999998 443 444432 2358999999999999999999888
Q ss_pred CCCCeEEEEeCccccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 127 GWEKTVTIVSCDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 127 ~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+...+|+++++|++++.. +++|+||+...-.+...+....+|..+.+.|||||++|=
T Consensus 120 ~~~~~v~~~~~D~~~~~~-~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii 176 (261)
T 4gek_A 120 KAPTPVDVIEGDIRDIAI-ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVL 176 (261)
T ss_dssp CCSSCEEEEESCTTTCCC-CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCceEEEeecccccccc-cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEE
Confidence 888899999999999876 479999985433333322234578889999999999763
No 13
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.27 E-value=9.8e-12 Score=109.51 Aligned_cols=99 Identities=13% Similarity=0.136 Sum_probs=78.2
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C-CCCccEEEecccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A-PEKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~-p~k~DiIVSEllG 157 (359)
.+|+|+|||+ ++..+++.|+. +|+|||.|+.|++.|+++++.++. ++|+++++|+.++. . .+++|+|++...
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p- 122 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA-SVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADPP- 122 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS-EEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECCC-
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC-eEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECCC-
Confidence 3699999998 66655556666 999999999999999999998888 67999999999873 2 578999998643
Q ss_pred ccCC-CCChHHHHHHHhh--ccCCCeEEEcc
Q 039233 158 SFGD-NELSPECLDGAQR--FLKQDGISIPS 185 (359)
Q Consensus 158 s~~~-~El~~e~L~~a~r--~Lkp~Gi~IP~ 185 (359)
+.. .+...+.+....+ .|||||+++=+
T Consensus 123 -~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 123 -YNVDSADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp -TTSCHHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred -CCcchhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 221 1335667777777 99999997643
No 14
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.26 E-value=6.1e-12 Score=117.39 Aligned_cols=117 Identities=14% Similarity=0.081 Sum_probs=92.4
Q ss_pred CcccHHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc
Q 039233 66 DSVKYIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC 141 (359)
Q Consensus 66 D~vry~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~ 141 (359)
+.++-..--++|...++ ++|+|+|||+ |+.++++.|...+|+|+|.|+.|++.|++|++.||+.++|+++.+|..+
T Consensus 4 ~~~~Ls~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~ 83 (244)
T 3gnl_A 4 NEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA 83 (244)
T ss_dssp -CCCCCHHHHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred cccchhHHHHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhh
Confidence 33444555577877775 4799999998 8888888775448999999999999999999999999999999999988
Q ss_pred ccCCC-CccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 142 WDAPE-KADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 142 ~~~p~-k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
.-.+. ++|+||+--||. +++.++|..+.+.|+++|.+|=+.
T Consensus 84 ~~~~~~~~D~IviagmGg----~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 84 VIEKKDAIDTIVIAGMGG----TLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp GCCGGGCCCEEEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ccCccccccEEEEeCCch----HHHHHHHHHHHHHhCCCCEEEEEc
Confidence 65554 599998633332 567789999999999887765443
No 15
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.24 E-value=9.8e-12 Score=114.65 Aligned_cols=108 Identities=12% Similarity=0.105 Sum_probs=85.6
Q ss_pred HHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-ccCCCCcc
Q 039233 75 RAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-WDAPEKAD 149 (359)
Q Consensus 75 ~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-~~~p~k~D 149 (359)
++|...++ ++|+|+|||+ ++.++++.|...+|+|+|.|+.|++.|++|++.|++.++|+++.+|..+ +...+++|
T Consensus 7 ~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D 86 (225)
T 3kr9_A 7 ELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVS 86 (225)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCC
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCC
Confidence 45666664 4799999998 8888888875559999999999999999999999999999999999965 33323799
Q ss_pred EEEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 150 ILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 150 iIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+||.--|| .+++.++|..+...|+++|.+|=+.
T Consensus 87 ~IviaG~G----g~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 87 VITIAGMG----GRLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp EEEEEEEC----HHHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred EEEEcCCC----hHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 98853333 2456789999999999988865433
No 16
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.24 E-value=1.1e-11 Score=114.77 Aligned_cols=113 Identities=12% Similarity=0.016 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC
Q 039233 70 YIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP 145 (359)
Q Consensus 70 y~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p 145 (359)
-..--++|...++ ++|+|+|||+ ++.++++.|...+|+|+|.|+.|++.|++|++.|++.++|+++.+|..+.-.+
T Consensus 8 Ls~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 8 LSKRLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp CCHHHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred HHHHHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc
Confidence 3344567777775 4799999998 88888887754489999999999999999999999999999999999886555
Q ss_pred C-CccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 146 E-KADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 146 ~-k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
. ++|+||+-=||. +++.++|..+.+.|+++|.+|=+.
T Consensus 88 ~~~~D~IviaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 88 ADNIDTITICGMGG----RLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp GGCCCEEEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ccccCEEEEeCCch----HHHHHHHHHHHHHhCcCCEEEEEC
Confidence 4 799988533332 557789999888899998755433
No 17
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.20 E-value=1.5e-10 Score=109.36 Aligned_cols=98 Identities=13% Similarity=0.086 Sum_probs=79.3
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEec-ccccc
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSE-LLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSE-llGs~ 159 (359)
+|||+|||+ ++ .+|.+.| .+|+|||.|+.+++.|+++...+++.++|+++.+|++++ ++++|+|+|- .+..+
T Consensus 75 ~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~~~~ 150 (302)
T 3hem_A 75 TLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGAFEHF 150 (302)
T ss_dssp EEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESCGGGT
T ss_pred EEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcchHHhc
Confidence 699999998 44 4444446 499999999999999999999999998999999999988 7899999973 33344
Q ss_pred CCC------CChHHHHHHHhhccCCCeEEEcc
Q 039233 160 GDN------ELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 160 ~~~------El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.+. +....+|..+.+.|||||+++=.
T Consensus 151 ~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 151 ADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp TCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 222 33467889999999999997743
No 18
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.19 E-value=1.4e-10 Score=104.21 Aligned_cols=94 Identities=10% Similarity=0.035 Sum_probs=75.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-ccCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-WDAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-~~~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++..+++.+ .+|+|||.|+.+++.|+++.+.++..++|+++++|+.+ +...+++|+|++.. .+
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~--~~ 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG--GG 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS--CC
T ss_pred CEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC--cc
Confidence 4799999998 555555553 39999999999999999999999998779999999998 44445899999643 11
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.++++..+.+.|||||+++=.
T Consensus 133 -----~~~~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 133 -----SQALYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp -----CHHHHHHHHHHSCTTCEEEEE
T ss_pred -----cHHHHHHHHHhcCCCcEEEEE
Confidence 233888889999999997643
No 19
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.19 E-value=4.6e-11 Score=108.19 Aligned_cols=121 Identities=17% Similarity=0.230 Sum_probs=93.9
Q ss_pred HHHHHHHhcCcccHHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeE
Q 039233 57 AQTYETFEKDSVKYIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTV 132 (359)
Q Consensus 57 s~~Ye~f~~D~vry~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V 132 (359)
+..|+.+.. ...|..+.+.+...+. .+|+|+|||+ ++...++. .+|++||.|+.+++.|+++...++ .++
T Consensus 8 a~~yd~~~~-~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~ 81 (243)
T 3d2l_A 8 AYVYDELMQ-DVPYPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN--RHV 81 (243)
T ss_dssp THHHHHHTT-TCCHHHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT--CCC
T ss_pred HHHHHHhhh-cccHHHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC--Cce
Confidence 356887764 4678888888888775 4799999998 44444333 399999999999999999987654 569
Q ss_pred EEEeCccccccCCCCccEEEec--cccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 133 TIVSCDMRCWDAPEKADILVSE--LLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 133 ~vi~~d~~~~~~p~k~DiIVSE--llGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+++.+|++++..++++|+|++- .+..+.+.+...++|..+.+.|||||+++
T Consensus 82 ~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~ 134 (243)
T 3d2l_A 82 DFWVQDMRELELPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLL 134 (243)
T ss_dssp EEEECCGGGCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEcChhhcCCCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 9999999998877899999973 34444333445668888899999999976
No 20
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.19 E-value=1.1e-10 Score=103.69 Aligned_cols=96 Identities=21% Similarity=0.155 Sum_probs=76.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++..+++.+...+|+|||.|+.+++.|+++++.+++ ++++++++|+.+... .+++|+|++....
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~D~i~~~~~~-- 118 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLPDPDRVFIGGSG-- 118 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSCCCSEEEESCCT--
T ss_pred CEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCCCCCEEEECCCC--
Confidence 4799999998 555555555445999999999999999999998888 569999999976533 3689999974322
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+...++|..+.+.|||||+++=
T Consensus 119 ---~~~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 119 ---GMLEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp ---TCHHHHHHHHHHHCCTTCEEEE
T ss_pred ---cCHHHHHHHHHHhcCCCeEEEE
Confidence 1466789999999999999763
No 21
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.18 E-value=2.5e-11 Score=112.67 Aligned_cols=100 Identities=18% Similarity=0.167 Sum_probs=78.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC---CCCccEEEeccc-
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA---PEKADILVSELL- 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~---p~k~DiIVSEll- 156 (359)
++|+|+|||+ ++.++++.+.. +|+|||.++.+++.|+++++.+++.++|+++++|++++.. ++++|+||++.-
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 4799999998 66666666655 9999999999999999999999999999999999999853 578999999632
Q ss_pred ----cccCC-------------CCChHHHHHHHhhccCCCeEEE
Q 039233 157 ----GSFGD-------------NELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 157 ----Gs~~~-------------~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+.... .....+++..+.+.|||||+++
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~ 173 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKAN 173 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEE
Confidence 00000 0113457888899999999965
No 22
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.18 E-value=5.1e-11 Score=104.08 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=74.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEeccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEllGs 158 (359)
++|+|+|||+ ++...++.+ .+|+|||.|+.|++.|+++.+.+++ ++|++++++.+++. .++++|+|++.+ ++
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~-~~ 99 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFNL-GY 99 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEEE-C-
T ss_pred CEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEeC-CC
Confidence 4799999998 555555543 4999999999999999999998888 66999999988852 367899999853 44
Q ss_pred cCC--C------CChHHHHHHHhhccCCCeEEEccc
Q 039233 159 FGD--N------ELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 159 ~~~--~------El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+-. . +.....|..+.+.|||||+++=..
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 321 0 112346777889999999976443
No 23
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.18 E-value=6.7e-11 Score=105.87 Aligned_cols=103 Identities=14% Similarity=0.108 Sum_probs=79.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCC-CeEEEEeCccccccC---CCC-ccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWE-KTVTIVSCDMRCWDA---PEK-ADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~-~~V~vi~~d~~~~~~---p~k-~DiIVSEl 155 (359)
++|||+|||+ ++..+++.|+. +|+|||.|+.|++.|+++++.+++. ++|+++++|+.++.. +++ +|+|++..
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAK-KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS-EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CeEEEcCCccCHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 4799999998 66655555665 9999999999999999999988885 579999999988632 367 99999864
Q ss_pred ccccCCCCChHHHHHHH--hhccCCCeEEEccccce
Q 039233 156 LGSFGDNELSPECLDGA--QRFLKQDGISIPSSYTS 189 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a--~r~Lkp~Gi~IP~~~t~ 189 (359)
. +. .+...+++... .++|||||+++-+....
T Consensus 134 ~--~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 134 P--FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp C--SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred C--CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 4 22 23356677777 57899999977554443
No 24
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.18 E-value=6.9e-11 Score=106.00 Aligned_cols=115 Identities=11% Similarity=0.019 Sum_probs=84.4
Q ss_pred HHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC----eEEEEeCcc
Q 039233 70 YIQYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEK----TVTIVSCDM 139 (359)
Q Consensus 70 y~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~----~V~vi~~d~ 139 (359)
+.+..+++...+. .+|||+|||+ ++..+++.+...+|+|||.|+.+++.|++++..+++.+ +|+++.+|+
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 14 NQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 3344455555543 4799999998 66555555544599999999999999999998887775 799999999
Q ss_pred ccccCC-CCccEEEec-cccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 140 RCWDAP-EKADILVSE-LLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 140 ~~~~~p-~k~DiIVSE-llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.....+ +++|+|++- .+..+ ..+...++|..+.+.|||||+++-.
T Consensus 94 ~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 94 TYQDKRFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp TSCCGGGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccccccCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 766543 689999963 22222 2223356888899999999987643
No 25
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.17 E-value=7.7e-11 Score=103.93 Aligned_cols=101 Identities=19% Similarity=0.199 Sum_probs=77.8
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEecccc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEllG 157 (359)
++|+|+|||+ ++ .+|.+.|...+|+|||.|+.+++.|+++++.+++.++|+++++|++++. .++++|+|++.. +
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~-~ 102 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL-G 102 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE-S
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC-C
Confidence 4799999998 44 4455544344999999999999999999999888788999999999873 567899999863 2
Q ss_pred ccC--CC------CChHHHHHHHhhccCCCeEEEc
Q 039233 158 SFG--DN------ELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 158 s~~--~~------El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.+- +. +...++|..+.+.|||||+++=
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 211 11 1124578888999999999763
No 26
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.17 E-value=7.5e-11 Score=105.75 Aligned_cols=102 Identities=9% Similarity=0.094 Sum_probs=77.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC----eEEEEeCccccccC-CCCccEEEec-
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEK----TVTIVSCDMRCWDA-PEKADILVSE- 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~----~V~vi~~d~~~~~~-p~k~DiIVSE- 154 (359)
.+|||+|||+ ++...++.+...+|++||.|+.+++.|+++...+++.+ +|+++.+|+..... ++++|+|++-
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 110 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIE 110 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEES
T ss_pred CEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHH
Confidence 4799999998 55555555554599999999999999999998877765 79999999977654 3689999962
Q ss_pred cccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 155 LLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 155 llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.+..+ ..+...++|..+.+.|||||++|-.
T Consensus 111 ~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 111 VIEHL-DENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp CGGGC-CHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred HHHhC-CHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 23323 2222346888899999999987643
No 27
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.16 E-value=2.2e-11 Score=115.51 Aligned_cols=130 Identities=18% Similarity=0.108 Sum_probs=93.6
Q ss_pred CcHHHHHHHh---cCcccHHHHHHHHHHhhc--ccCCcCChhH--HHH-HHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc
Q 039233 55 LEAQTYETFE---KDSVKYIQYQRAIGNALV--DRVPDEEASS--LTT-AAEETGRKLKIYAVEKNPNAVVTLHSLVRLE 126 (359)
Q Consensus 55 L~s~~Ye~f~---~D~vry~~Y~~AI~~~~~--d~v~D~g~Gt--l~~-~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n 126 (359)
++...|+... ..+.++..|++.+...+. .+|+|+|||+ ++. +|.+.....+|++||.|+.+++.|+++...+
T Consensus 87 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 166 (305)
T 3ocj_A 87 LERVFYERLPAVLATRERHGHFRRALQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH 166 (305)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS
T ss_pred HHHHHHhhchhhhcchHHHHHHHHHHHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc
Confidence 4444555422 123445557777765554 4799999998 333 2212233459999999999999999999988
Q ss_pred CCCCeEEEEeCccccccCCCCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 127 GWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 127 ~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
++.++|+++++|+.++..++++|+|++.. +-.+.+.+...++|..+.+.|||||+++=
T Consensus 167 ~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 167 ALAGQITLHRQDAWKLDTREGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp TTGGGEEEEECCGGGCCCCSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCceEEEECchhcCCccCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 89999999999999987778999999743 22232333344578999999999999774
No 28
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.16 E-value=7.2e-11 Score=102.64 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=76.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----CCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----PEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----p~k~DiIVSEl 155 (359)
++|+|+|||+ ++..+++.++. +|+|||.|+.+++.|+++++.+++.++++++++|+.+... ++++|+|++..
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMD-KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCEEEeCCccCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 3799999998 55545555655 9999999999999999999988887889999999988532 57899999864
Q ss_pred ccccCCCCChHHHHHHH--hhccCCCeEEEc
Q 039233 156 LGSFGDNELSPECLDGA--QRFLKQDGISIP 184 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a--~r~Lkp~Gi~IP 184 (359)
. +. .....+.+... .++|||||+++=
T Consensus 125 ~--~~-~~~~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 125 P--YA-KQEIVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp C--GG-GCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred C--CC-chhHHHHHHHHHHhcccCCCCEEEE
Confidence 4 22 22345566665 788999998653
No 29
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.15 E-value=8.3e-11 Score=106.31 Aligned_cols=122 Identities=17% Similarity=0.215 Sum_probs=92.9
Q ss_pred HHHHHHhcCcccHHHHHHHHHHhhc------ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCC
Q 039233 58 QTYETFEKDSVKYIQYQRAIGNALV------DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWE 129 (359)
Q Consensus 58 ~~Ye~f~~D~vry~~Y~~AI~~~~~------d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~ 129 (359)
..|+.+..-...|..+.+.+...+. .+|||+|||+ ++...++.| .+|++||.|+.++..|+++...++.
T Consensus 8 ~~yd~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~~~- 84 (246)
T 1y8c_A 8 HIYDKLIRADVDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQGL- 84 (246)
T ss_dssp HHHHHHTTCSCCHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHccccccHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhcCC-
Confidence 4577765524678888877777653 3689999998 554444555 4899999999999999999887654
Q ss_pred CeEEEEeCccccccCCCCccEEEec--cccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 130 KTVTIVSCDMRCWDAPEKADILVSE--LLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 130 ~~V~vi~~d~~~~~~p~k~DiIVSE--llGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+++++.+|+.++..++++|+|++- .+..+.+.+...++|..+.+.|||||+++
T Consensus 85 -~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 139 (246)
T 1y8c_A 85 -KPRLACQDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFI 139 (246)
T ss_dssp -CCEEECCCGGGCCCSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred -CeEEEecccccCCccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 699999999998777899999973 34444332345668888999999999876
No 30
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.15 E-value=9.1e-11 Score=109.83 Aligned_cols=130 Identities=14% Similarity=0.138 Sum_probs=97.4
Q ss_pred ccCcHHHHHHHhc-CcccHHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh
Q 039233 53 DNLEAQTYETFEK-DSVKYIQYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL 125 (359)
Q Consensus 53 dnL~s~~Ye~f~~-D~vry~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~ 125 (359)
+...+..|+.+.. ...++..|.+.+...+. .+|||+|||+ ++...++.|+ +|+|||.|+.|+..|+++...
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~ 101 (293)
T 3thr_A 24 DGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWN 101 (293)
T ss_dssp TCHHHHHHHHHHTCCSCBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCcchHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhh
Confidence 3344456776664 56788999988887764 3799999998 5555555563 999999999999999998754
Q ss_pred cCCC---CeEEEEeCcccccc----CCCCccEEEe--ccccccCC----CCChHHHHHHHhhccCCCeEEEc
Q 039233 126 EGWE---KTVTIVSCDMRCWD----APEKADILVS--ELLGSFGD----NELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 126 n~~~---~~V~vi~~d~~~~~----~p~k~DiIVS--EllGs~~~----~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.+.. .++.++.+|+.++. .++++|+|++ +.+..+.+ .+....+|..+.+.|||||+++=
T Consensus 102 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 102 RRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp TTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred cccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 3322 35899999998875 4578999998 45555544 33456788999999999999763
No 31
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.15 E-value=1.4e-10 Score=107.37 Aligned_cols=100 Identities=16% Similarity=0.057 Sum_probs=79.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~DiIVSEllGs~ 159 (359)
.+|||+|||+ ++..+++.+. .+|+|||.|+.+++.|+++.+.+++.++|+++.+|++++.. .+++|+|+|..+-..
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 126 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGHVT-GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYN 126 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTTCS-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGG
T ss_pred CEEEEeCCCCCHHHHHHHhccC-CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCcee
Confidence 3699999998 5555555553 39999999999999999999998998999999999999865 468999997432221
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
. ...++|..+.+.|||||.++=..
T Consensus 127 ~---~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 127 I---GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp T---CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred c---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 1 25678899999999999976443
No 32
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.15 E-value=5.6e-11 Score=110.51 Aligned_cols=93 Identities=13% Similarity=0.078 Sum_probs=75.8
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC----CCCccEEEecccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA----PEKADILVSELLG 157 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~----p~k~DiIVSEllG 157 (359)
+|+|+|||+ ++...++.....+|+|||.|+.++..|+++++.+++.+ |+++++|++++.. .+++|+|+|..+.
T Consensus 83 ~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~~~~~~fD~I~s~a~~ 161 (249)
T 3g89_A 83 RVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREAGHREAYARAVARAVA 161 (249)
T ss_dssp EEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTSTTTTTCEEEEEEESSC
T ss_pred EEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcccccCCCceEEEECCcC
Confidence 689999998 44443333233499999999999999999999999987 9999999999754 3789999996443
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..+.++..+.++|||||.++
T Consensus 162 ------~~~~ll~~~~~~LkpgG~l~ 181 (249)
T 3g89_A 162 ------PLCVLSELLLPFLEVGGAAV 181 (249)
T ss_dssp ------CHHHHHHHHGGGEEEEEEEE
T ss_pred ------CHHHHHHHHHHHcCCCeEEE
Confidence 24678889999999999876
No 33
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.15 E-value=2.2e-10 Score=109.76 Aligned_cols=106 Identities=19% Similarity=0.247 Sum_probs=82.5
Q ss_pred cHHHHHHHHHHhh-------cccCCcCChhH--HH-HHHHH-cCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC
Q 039233 69 KYIQYQRAIGNAL-------VDRVPDEEASS--LT-TAAEE-TGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC 137 (359)
Q Consensus 69 ry~~Y~~AI~~~~-------~d~v~D~g~Gt--l~-~~A~~-aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~ 137 (359)
-|+.|.+-+..-+ .++|+|+|||+ ++ .++++ .| .+|+|||.|+.|++.|++++++.|. ++|+++++
T Consensus 103 y~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~g--a~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~g 179 (298)
T 3fpf_A 103 FYPRYLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYG--MRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITG 179 (298)
T ss_dssp THHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTC--CEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEES
T ss_pred CcccHHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEEC
Confidence 4566766665432 14799999996 32 33344 44 4999999999999999999998888 78999999
Q ss_pred ccccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 138 DMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 138 d~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+.++. ...+|+|++..+ -+...+++..+.+.|||||+++
T Consensus 180 Da~~l~-d~~FDvV~~~a~-----~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 180 DETVID-GLEFDVLMVAAL-----AEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp CGGGGG-GCCCSEEEECTT-----CSCHHHHHHHHHHHCCTTCEEE
T ss_pred chhhCC-CCCcCEEEECCC-----ccCHHHHHHHHHHHcCCCcEEE
Confidence 999985 578999997432 1335578999999999999977
No 34
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.15 E-value=1.6e-10 Score=105.70 Aligned_cols=97 Identities=19% Similarity=0.152 Sum_probs=77.2
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
.+|||+|||+ ++ .+|.+.| .+|+|||.|+.+++.|+++.+.+++.++|+++.+|+.++..++.+|+|+| .+.+
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~--~~~~ 113 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAAC--VGAT 113 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEE--ESCG
T ss_pred CEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEE--CCCh
Confidence 4799999998 44 3444444 48999999999999999999988888889999999999866678999997 3332
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
-.-......|..+.+.|||||.++
T Consensus 114 ~~~~~~~~~l~~~~r~LkpgG~l~ 137 (256)
T 1nkv_A 114 WIAGGFAGAEELLAQSLKPGGIML 137 (256)
T ss_dssp GGTSSSHHHHHHHTTSEEEEEEEE
T ss_pred HhcCCHHHHHHHHHHHcCCCeEEE
Confidence 211125678999999999999865
No 35
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.15 E-value=1.4e-10 Score=106.10 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=79.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++...++.+.. +|+|||.|+.++..|+++.+.+++.++|+++.+|++++..+ +++|+|++..+-..
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhh
Confidence 3799999998 55444454444 99999999999999999999999999999999999988654 78999997432221
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
. ...++|..+.+.|||||.++=..
T Consensus 127 ~---~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 127 I---GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp C---CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred c---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 25678899999999999976443
No 36
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.14 E-value=5.5e-11 Score=110.93 Aligned_cols=101 Identities=12% Similarity=0.111 Sum_probs=76.2
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh---cCCCCeEEEEeCcccccc--------CCCCcc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL---EGWEKTVTIVSCDMRCWD--------APEKAD 149 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~---n~~~~~V~vi~~d~~~~~--------~p~k~D 149 (359)
++|+|+|||+ ++.++++.+...+|+|||.++.+++.|+++++. +++.++|+++++|+.++. .++++|
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD 117 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFH 117 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEE
T ss_pred CEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcC
Confidence 3699999988 554444433335999999999999999999998 899999999999999872 246899
Q ss_pred EEEeccc--cc--------------cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 150 ILVSELL--GS--------------FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 150 iIVSEll--Gs--------------~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+||+..- .. ........+++..+.++|||||.++
T Consensus 118 ~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~ 167 (260)
T 2ozv_A 118 HVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLS 167 (260)
T ss_dssp EEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEE
Confidence 9999621 00 0112235668888999999999854
No 37
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.13 E-value=2.4e-10 Score=106.89 Aligned_cols=97 Identities=16% Similarity=0.213 Sum_probs=79.8
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
.+|||+|||+ ++..+++.| .+|+|||.|+.+++.|+++...++. +|+++.+|+.++..++++|+|++-..-...
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g--~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLG--YDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFIVSTVVFMFL 197 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEEEECSSGGGS
T ss_pred CcEEEECCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEEEEccchhhC
Confidence 4799999998 555555556 3999999999999999999998777 699999999998778899999985443344
Q ss_pred CCCChHHHHHHHhhccCCCeEEE
Q 039233 161 DNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..+....+|..+.+.|||||+++
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~ 220 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNL 220 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEE
Confidence 44556678999999999999844
No 38
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.10 E-value=6.3e-11 Score=111.82 Aligned_cols=128 Identities=15% Similarity=0.111 Sum_probs=82.1
Q ss_pred cCcHHHHHHHhcCcccHHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCC
Q 039233 54 NLEAQTYETFEKDSVKYIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWE 129 (359)
Q Consensus 54 nL~s~~Ye~f~~D~vry~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~ 129 (359)
...+..|+.+..+...+..++..+..... .+|||+|||+ ++...++.| .+|+|||.|+.+++.|+++...++.+
T Consensus 53 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~ 130 (299)
T 3g2m_A 53 EGAADTYRDLIQDADGTSEAREFATRTGPVSGPVLELAAGMGRLTFPFLDLG--WEVTALELSTSVLAAFRKRLAEAPAD 130 (299)
T ss_dssp -------------CCCHHHHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTTT--CCEEEEESCHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHhcccCccHHHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHhhcccc
Confidence 33345566666543334444443333322 4799999998 554444555 48999999999999999998865543
Q ss_pred --CeEEEEeCccccccCCCCccEEEec--cccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 130 --KTVTIVSCDMRCWDAPEKADILVSE--LLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 130 --~~V~vi~~d~~~~~~p~k~DiIVSE--llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
++|+++.+|+.++..++++|+||+- .+. ..+.+....+|..+.+.|||||+++=
T Consensus 131 ~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~ 188 (299)
T 3g2m_A 131 VRDRCTLVQGDMSAFALDKRFGTVVISSGSIN-ELDEADRRGLYASVREHLEPGGKFLL 188 (299)
T ss_dssp HHTTEEEEECBTTBCCCSCCEEEEEECHHHHT-TSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccceEEEeCchhcCCcCCCcCEEEECCcccc-cCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 6799999999998888899988841 222 22323346688889999999998653
No 39
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.10 E-value=2.7e-10 Score=99.78 Aligned_cols=98 Identities=15% Similarity=0.235 Sum_probs=77.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
++|+|+|||+ ++...++.| .+|+|||.|+.+++.|+++.+.++..+ |+++.+|+.++..++++|+|++...-...
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANG--YDVDAWDKNAMSIANVERIKSIENLDN-LHTRVVDLNNLTFDRQYDFILSTVVLMFL 110 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECCGGGCCCCCCEEEEEEESCGGGS
T ss_pred CeEEEEcCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhCCCCC-cEEEEcchhhCCCCCCceEEEEcchhhhC
Confidence 4799999997 554444555 499999999999999999998877755 99999999998777889999975432333
Q ss_pred CCCChHHHHHHHhhccCCCeEEE
Q 039233 161 DNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..+...++|..+.+.|||||.++
T Consensus 111 ~~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 111 EAKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEE
Confidence 33345678899999999999853
No 40
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.10 E-value=1.6e-10 Score=104.48 Aligned_cols=124 Identities=19% Similarity=0.168 Sum_probs=85.8
Q ss_pred HHHHHHHhcCcc-cHHHHHHHHHHhhc-----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCC
Q 039233 57 AQTYETFEKDSV-KYIQYQRAIGNALV-----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGW 128 (359)
Q Consensus 57 s~~Ye~f~~D~v-ry~~Y~~AI~~~~~-----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~ 128 (359)
+..|+.+.+... .+....+.+...+. .+|||+|||+ ++...++.....+|++||.|+.+++.|+++...++
T Consensus 14 a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~- 92 (234)
T 3dtn_A 14 SGKYDEQRRKFIPCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL- 92 (234)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-
T ss_pred HHHHHHhHHHhCcCHHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-
Confidence 345766654322 24444455555543 3689999998 44444444333599999999999999999876543
Q ss_pred CCeEEEEeCccccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 129 EKTVTIVSCDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 129 ~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+|+++.+|+.++..++++|+|++-..-.....+...++|..+.+.|||||.++
T Consensus 93 --~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 145 (234)
T 3dtn_A 93 --KVKYIEADYSKYDFEEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFI 145 (234)
T ss_dssp --TEEEEESCTTTCCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred --CEEEEeCchhccCCCCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 79999999999887789999997432222222222357889999999999977
No 41
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.10 E-value=1.3e-10 Score=106.56 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=75.1
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC----CCCccEEEecccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA----PEKADILVSELLG 157 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~----p~k~DiIVSEllG 157 (359)
+|+|+|||+ ++...++.....+|+|||.|+.|++.|+++++.+++.+ |+++++|+.++.. ++++|+|+|..+
T Consensus 73 ~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~fD~V~~~~~- 150 (240)
T 1xdz_A 73 TICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQRKDVRESYDIVTARAV- 150 (240)
T ss_dssp EEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTCTTTTTCEEEEEEECC-
T ss_pred EEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhcccccccCCccEEEEecc-
Confidence 689999998 44433332233599999999999999999999888876 9999999998763 468999998542
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.....++..+.++|||||+++=
T Consensus 151 -----~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 151 -----ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp -----SCHHHHHHHHGGGEEEEEEEEE
T ss_pred -----CCHHHHHHHHHHhcCCCCEEEE
Confidence 2256788889999999999764
No 42
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.09 E-value=3.6e-10 Score=100.12 Aligned_cols=97 Identities=18% Similarity=0.140 Sum_probs=77.1
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecc-cccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSEL-LGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEl-lGs~ 159 (359)
+|+|+|||+ ++...++.. ..+|+++|.|+.+++.|+++++.+++.++|+++++|+.++..+ +++|+|++-. +..+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC
T ss_pred EEEEECCCCCHHHHHHHHcC-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc
Confidence 799999998 444333332 2499999999999999999999988888899999999998754 6899999732 2222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+...++|..+.+.|||||+++=
T Consensus 125 ---~~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 125 ---EDVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp ---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred ---cCHHHHHHHHHHhCCCCCEEEE
Confidence 3356788999999999999653
No 43
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.08 E-value=3.7e-10 Score=100.19 Aligned_cols=95 Identities=9% Similarity=0.030 Sum_probs=76.6
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++ .+|.+.+ ..+|+++|.|+.++..|+++++.++..+ |+++++|+.++..++++|+|++..+
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPSEPPFDGVISRAF--- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCCCSCEEEEECSCS---
T ss_pred CeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCccCCcCEEEEecc---
Confidence 4789999998 44 3444433 3499999999999999999999888877 9999999999876678999997432
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+....++..+.+.|||||.++-.
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEE
Confidence 23567889999999999987654
No 44
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.07 E-value=4.7e-10 Score=102.44 Aligned_cols=98 Identities=11% Similarity=0.143 Sum_probs=78.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC---CCCccEEEecccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA---PEKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~---p~k~DiIVSEllG 157 (359)
.+|+|+|||+ .+...++++...+|++||.|+.+++.|+++++..++.++|+++.+|+.+... ++++|+|++..
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-- 150 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA-- 150 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET--
T ss_pred CEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC--
Confidence 4799999988 4444444443459999999999999999999998898889999999988633 67999999632
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
..+..++.+..+.+.|||||+++=.
T Consensus 151 ---~~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 151 ---AKAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ---TSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred ---cHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 2334677889999999999998753
No 45
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.07 E-value=2.1e-10 Score=103.63 Aligned_cols=98 Identities=16% Similarity=0.106 Sum_probs=73.3
Q ss_pred ccCCcCChh-H--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-C-CCCccEEEeccc-
Q 039233 83 DRVPDEEAS-S--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-A-PEKADILVSELL- 156 (359)
Q Consensus 83 d~v~D~g~G-t--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-~-p~k~DiIVSEll- 156 (359)
++|+|+||| + ++..+++.+. .+|+|+|.|+.|++.|+++++.++. +|+++++|++.+. . ++++|+|++...
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFN-CKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 479999999 7 5554444422 4999999999999999999998877 6999999976543 2 378999998632
Q ss_pred ----------------cccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 157 ----------------GSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 157 ----------------Gs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|.....+...++|..+.+.|||||+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 176 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVA 176 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEE
Confidence 111111223667888999999999864
No 46
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.07 E-value=5.2e-10 Score=102.09 Aligned_cols=100 Identities=8% Similarity=0.076 Sum_probs=79.4
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCC-CeEEEEeCccccc--cC-CCCccEEEeccc
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWE-KTVTIVSCDMRCW--DA-PEKADILVSELL 156 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~-~~V~vi~~d~~~~--~~-p~k~DiIVSEll 156 (359)
+|+|+|||+ .+ .+|...+...+|++||.|+.+++.|+++++.+++. ++|+++++|+.++ .+ ++++|+|++..
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~- 137 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV- 137 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC-
Confidence 699999998 33 33444443459999999999999999999999998 8999999999886 33 57899999642
Q ss_pred cccCCCCChHHHHHHHhhccCCCeEEEccccc
Q 039233 157 GSFGDNELSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 157 Gs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
..+..++.+..+.+.|||||+++-....
T Consensus 138 ----~~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 138 ----SPMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp ----CTTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred ----cHHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 2234567889999999999998865543
No 47
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.07 E-value=3.1e-10 Score=101.65 Aligned_cols=110 Identities=13% Similarity=0.087 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC
Q 039233 70 YIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP 145 (359)
Q Consensus 70 y~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p 145 (359)
.+...+.+...+. .+|+|+|||+ ++...++.+. +|++||.|+.+++.|+++.+.++ .+|+++.+|+.++..+
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~ 100 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFE 100 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSC
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCC
Confidence 4444455555443 4799999997 6666666663 99999999999999999988765 6799999999997654
Q ss_pred -CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 146 -EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 146 -~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+++|+|++...-.+...+...++|..+.+.|||||.++
T Consensus 101 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 139 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFI 139 (227)
T ss_dssp TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 58999997432112222224567888899999999875
No 48
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.07 E-value=1.2e-10 Score=107.34 Aligned_cols=121 Identities=10% Similarity=0.131 Sum_probs=88.8
Q ss_pred HHHHHHHhcC-cccHHHHHHHHHHhhc------ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC
Q 039233 57 AQTYETFEKD-SVKYIQYQRAIGNALV------DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG 127 (359)
Q Consensus 57 s~~Ye~f~~D-~vry~~Y~~AI~~~~~------d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~ 127 (359)
+..|+.+... ...|..+.+.+.+.+. .+|||+|||+ ++...++.| .+|++||.|+.+++.|+++..
T Consensus 19 a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~--- 93 (263)
T 3pfg_A 19 AELYDLVHQGKGKDYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP--- 93 (263)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---
T ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---
Confidence 4568776642 2567666666655542 3699999998 555555555 389999999999999988642
Q ss_pred CCCeEEEEeCccccccCCCCccEEEec--cccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 128 WEKTVTIVSCDMRCWDAPEKADILVSE--LLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 128 ~~~~V~vi~~d~~~~~~p~k~DiIVSE--llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+|+++.+|++++..++++|+|++- .+..+.+.+....+|..+.+.|||||.++=+
T Consensus 94 ---~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 94 ---DAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ---TSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ---CCEEEECChHHCCccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 589999999998878899999973 3333333234556788899999999997643
No 49
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.07 E-value=2.8e-10 Score=101.90 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=76.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-c-CCCCccEEEeccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-D-APEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-~-~p~k~DiIVSEllGs 158 (359)
++|+|+|||+ ++..+++.|+. +|+|||.|+.|++.|+++++.++. ++|+++++|+.++ . ..+++|+|++...
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~-~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p-- 131 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAA-GATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPP-- 131 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS-EEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCS--
T ss_pred CeEEEeCCCcCHHHHHHHhcCCC-EEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCC--
Confidence 4799999998 66655566666 999999999999999999998888 5699999999884 2 2468999998654
Q ss_pred cCCCCChHHHHHHHh--hccCCCeEEEcc
Q 039233 159 FGDNELSPECLDGAQ--RFLKQDGISIPS 185 (359)
Q Consensus 159 ~~~~El~~e~L~~a~--r~Lkp~Gi~IP~ 185 (359)
+. .+...+++.... ++|||||+++-+
T Consensus 132 ~~-~~~~~~~l~~l~~~~~L~pgG~l~i~ 159 (202)
T 2fpo_A 132 FR-RGLLEETINLLEDNGWLADEALIYVE 159 (202)
T ss_dssp SS-TTTHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CC-CCcHHHHHHHHHhcCccCCCcEEEEE
Confidence 22 234556776664 469999997644
No 50
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.06 E-value=7.2e-10 Score=95.46 Aligned_cols=95 Identities=13% Similarity=0.060 Sum_probs=72.1
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-cCC-CCccEEEeccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-DAP-EKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-~~p-~k~DiIVSEllGs 158 (359)
++|+|+|||+ ++..+++.....+|+++|.|+.+++.|+++++.+++.+++ ++++|+.+. ... +++|+|++.. .
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~--~ 103 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG--G 103 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC---
T ss_pred CeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC--c
Confidence 3799999998 5544444322349999999999999999999988888779 899998653 222 7899999632 2
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+. . .+++..+.+.|||||+++=
T Consensus 104 ~~-~---~~~l~~~~~~L~~gG~l~~ 125 (178)
T 3hm2_A 104 LT-A---PGVFAAAWKRLPVGGRLVA 125 (178)
T ss_dssp TT-C---TTHHHHHHHTCCTTCEEEE
T ss_pred cc-H---HHHHHHHHHhcCCCCEEEE
Confidence 21 1 5588899999999999763
No 51
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.06 E-value=3.8e-10 Score=106.08 Aligned_cols=93 Identities=27% Similarity=0.304 Sum_probs=75.6
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++..+++. ++. +|+|||.|+.|++.|+++++.|++.+ ++++++|++++...+++|+||+....
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~-~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d~~~~~~~~~~D~Vi~d~p~-- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPK-LVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADNRDVELKDVADRVIMGYVH-- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCS-EEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESCGGGCCCTTCEEEEEECCCS--
T ss_pred CEEEEecCcCCHHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECChHHcCccCCceEEEECCcc--
Confidence 4799999988 55444444 444 99999999999999999999999876 88999999998334689999976432
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...+.+..+.+.|||||+++
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~ 216 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIH 216 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEE
Confidence 35668888899999999876
No 52
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.06 E-value=5e-10 Score=104.63 Aligned_cols=96 Identities=11% Similarity=0.159 Sum_probs=76.3
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEecccccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEllGs~ 159 (359)
+|||+|||+ ++...++.| .+|+|||.|+.+++.|+++++.+++..+|+++.+|+.++. .++++|+|++. +.+
T Consensus 71 ~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~--~~l 146 (285)
T 4htf_A 71 RVLDAGGGEGQTAIKMAERG--HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFH--AVL 146 (285)
T ss_dssp EEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEE--SCG
T ss_pred EEEEeCCcchHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEEC--chh
Confidence 699999998 555555555 4999999999999999999998888788999999999986 56789999973 222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..-....++|..+.+.|||||+++
T Consensus 147 ~~~~~~~~~l~~~~~~LkpgG~l~ 170 (285)
T 4htf_A 147 EWVADPRSVLQTLWSVLRPGGVLS 170 (285)
T ss_dssp GGCSCHHHHHHHHHHTEEEEEEEE
T ss_pred hcccCHHHHHHHHHHHcCCCeEEE
Confidence 111224678899999999999975
No 53
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.05 E-value=8e-10 Score=102.15 Aligned_cols=97 Identities=16% Similarity=0.114 Sum_probs=76.7
Q ss_pred ccCCcCChhH--HHHH-HHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecc-cc
Q 039233 83 DRVPDEEASS--LTTA-AEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSEL-LG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~-A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEl-lG 157 (359)
.+|||+|||+ ++.. |.+.| .+|++||.|+.+++.|+++.+.+++.++|+++.+|++++..+ +++|+|+|.. +.
T Consensus 63 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 140 (273)
T 3bus_A 63 DRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLH 140 (273)
T ss_dssp CEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTT
T ss_pred CEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhh
Confidence 3689999997 4444 44444 499999999999999999999888988999999999997654 5899999732 22
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.+ ......|..+.+.|||||.++=
T Consensus 141 ~~---~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 141 HM---PDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp TS---SCHHHHHHHHHTTEEEEEEEEE
T ss_pred hC---CCHHHHHHHHHHHcCCCeEEEE
Confidence 22 2246788999999999998664
No 54
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.05 E-value=8.6e-10 Score=98.96 Aligned_cols=100 Identities=10% Similarity=0.068 Sum_probs=75.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C-CCCccEEEecccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A-PEKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~-p~k~DiIVSEllG 157 (359)
++|+|+|||+ ++...++.....+|+|||.|+.++..|+++++.+++ ++|+++++|+.++. + ++.+|+|++....
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~ 121 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD 121 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEESCC
T ss_pred CeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEECCC
Confidence 4799999998 444334433345999999999999999999998888 46999999999865 3 4679999986432
Q ss_pred ccCC--C----CChHHHHHHHhhccCCCeEEE
Q 039233 158 SFGD--N----ELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 158 s~~~--~----El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.... . ....++|..+.+.|||||+++
T Consensus 122 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 153 (214)
T 1yzh_A 122 PWPKKRHEKRRLTYKTFLDTFKRILPENGEIH 153 (214)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEE
T ss_pred CccccchhhhccCCHHHHHHHHHHcCCCcEEE
Confidence 1100 0 023568899999999999864
No 55
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.05 E-value=2.4e-10 Score=101.99 Aligned_cols=107 Identities=12% Similarity=0.132 Sum_probs=79.4
Q ss_pred HHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC
Q 039233 72 QYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP 145 (359)
Q Consensus 72 ~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p 145 (359)
.+.+.+...+. .+|||+|||+ ++...++.| .+|+|||.|+.+++.|+++...+ .+|+++.+|+.++..+
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFSTA 112 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCCCS
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCCCC
Confidence 34455554443 3699999998 555555555 39999999999999999987653 2699999999999877
Q ss_pred CCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 146 EKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 146 ~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+++|+|++-. +..+.+.+....+|..+.+.|||||+++
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 8999999732 2223322333467888899999999976
No 56
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.05 E-value=1.7e-10 Score=100.00 Aligned_cols=98 Identities=18% Similarity=0.185 Sum_probs=75.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cCCCCccEEEeccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DAPEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~p~k~DiIVSEllGs 158 (359)
++|+|+|||+ ++..+++.|.. +|+|||.|+.+++.|+++++.+++.++++++.+|+.++ ..+.++|+|++...
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~-- 109 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGMS-AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP-- 109 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS--
T ss_pred CeEEEeCCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC--
Confidence 3689999998 55555555655 99999999999999999999888888899999999884 24567999998532
Q ss_pred cCCCCChHHHHHHHh--hccCCCeEEEc
Q 039233 159 FGDNELSPECLDGAQ--RFLKQDGISIP 184 (359)
Q Consensus 159 ~~~~El~~e~L~~a~--r~Lkp~Gi~IP 184 (359)
+. .....+.+.... +.|||||+++=
T Consensus 110 ~~-~~~~~~~~~~l~~~~~L~~gG~l~~ 136 (177)
T 2esr_A 110 YA-KETIVATIEALAAKNLLSEQVMVVC 136 (177)
T ss_dssp SH-HHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CC-cchHHHHHHHHHhCCCcCCCcEEEE
Confidence 11 112345666655 89999998653
No 57
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.04 E-value=4.3e-10 Score=102.74 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=74.8
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc-
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF- 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~- 159 (359)
.+|+|+|||+ ++...++.| .+|+|||.|+.+++.|+++...++. +|+++++|++++..++++|+|++- .+++
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~fD~v~~~-~~~~~ 117 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAERG--YEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFKNEFDAVTMF-FSTIM 117 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCCSCEEEEEEC-SSGGG
T ss_pred CEEEEeCCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccCCCccEEEEc-CCchh
Confidence 3689999998 555555555 4999999999999999999887654 699999999998888899999962 1111
Q ss_pred -CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 -GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 -~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...+...++|..+.+.|||||++|
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li 142 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFI 142 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 122234568888899999999976
No 58
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.03 E-value=1e-09 Score=102.46 Aligned_cols=96 Identities=20% Similarity=0.236 Sum_probs=77.2
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEec-ccccc
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSE-LLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSE-llGs~ 159 (359)
+|||+|||+ ++ .+|.+.| .+|++||.|+.+++.|+++++..+..++|+++.+|++++. +++|+|+|- .+..+
T Consensus 67 ~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l~~~ 142 (287)
T 1kpg_A 67 TLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGAFEHF 142 (287)
T ss_dssp EEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESCGGGT
T ss_pred EEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCchhhc
Confidence 689999997 44 4444566 3999999999999999999988888888999999998764 889999973 33333
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+. +...++|..+.+.|||||.++=
T Consensus 143 ~~-~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 143 GH-ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp CT-TTHHHHHHHHHHHSCTTCEEEE
T ss_pred Ch-HHHHHHHHHHHHhcCCCCEEEE
Confidence 32 4457789999999999999764
No 59
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.03 E-value=5.7e-10 Score=106.08 Aligned_cols=94 Identities=15% Similarity=0.060 Sum_probs=77.1
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecc-ccc
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSEL-LGS 158 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEl-lGs 158 (359)
+|||+|||+ ++ .+|.+.| .+|+|||.++.+++.|+++.+.+++.++|+++.+|++++..+ +++|+|++-. +..
T Consensus 120 ~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~ 197 (312)
T 3vc1_A 120 TLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMY 197 (312)
T ss_dssp EEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGG
T ss_pred EEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhh
Confidence 689999998 44 3444435 389999999999999999999999988999999999998654 7899999732 222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+ + ..++|..+.+.|||||.++
T Consensus 198 ~-~---~~~~l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 198 V-D---LHDLFSEHSRFLKVGGRYV 218 (312)
T ss_dssp S-C---HHHHHHHHHHHEEEEEEEE
T ss_pred C-C---HHHHHHHHHHHcCCCcEEE
Confidence 2 2 6778999999999999976
No 60
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.03 E-value=8.1e-10 Score=101.40 Aligned_cols=94 Identities=19% Similarity=0.212 Sum_probs=76.8
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++..+++. |...+|+++|.|+.+++.|+++++.+++.++|+++++|+.+.-..+++|+|++.+-
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~--- 171 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDLP--- 171 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECSS---
T ss_pred CEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECCC---
Confidence 3799999998 54444444 54459999999999999999999999999999999999998755678999998432
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...++|..+.+.|||||.++
T Consensus 172 ----~~~~~l~~~~~~L~~gG~l~ 191 (255)
T 3mb5_A 172 ----QPERVVEHAAKALKPGGFFV 191 (255)
T ss_dssp ----CGGGGHHHHHHHEEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCCEEE
Confidence 12458899999999999865
No 61
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.02 E-value=1.2e-09 Score=103.76 Aligned_cols=95 Identities=14% Similarity=0.140 Sum_probs=76.1
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEec-ccccc
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSE-LLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSE-llGs~ 159 (359)
+|+|+|||+ ++ .+|.+.| .+|++||.|+.+++.|+++.+..++.++|+++.+|++++ ++++|+|++- .+..+
T Consensus 93 ~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~l~~~ 168 (318)
T 2fk8_A 93 TLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF--AEPVDRIVSIEAFEHF 168 (318)
T ss_dssp EEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--CCCCSEEEEESCGGGT
T ss_pred EEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC--CCCcCEEEEeChHHhc
Confidence 689999997 44 4444445 399999999999999999999888888999999999887 4789999973 23333
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+. +...++|..+.+.|||||.++
T Consensus 169 ~~-~~~~~~l~~~~~~LkpgG~l~ 191 (318)
T 2fk8_A 169 GH-ENYDDFFKRCFNIMPADGRMT 191 (318)
T ss_dssp CG-GGHHHHHHHHHHHSCTTCEEE
T ss_pred CH-HHHHHHHHHHHHhcCCCcEEE
Confidence 22 345678899999999999976
No 62
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.02 E-value=1.9e-10 Score=104.33 Aligned_cols=99 Identities=15% Similarity=0.185 Sum_probs=78.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEec-ccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSE-LLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSE-llGs~ 159 (359)
.+|||+|||+ ++...++.| .+|+|||.|+.+++.|+++....+..++|+++.+|+.++..++++|+|++- .+..+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE--RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAI 145 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT--EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTS
T ss_pred CCEEEeCCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcC
Confidence 3799999998 444444444 489999999999999999988766777899999999998877899999973 23322
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
..+....+|..+.+.|||||.++=
T Consensus 146 -~~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 146 -EPEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp -CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred -CHHHHHHHHHHHHHHCCCCcEEEE
Confidence 233456788999999999999763
No 63
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.02 E-value=3.6e-10 Score=104.99 Aligned_cols=106 Identities=22% Similarity=0.213 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC
Q 039233 70 YIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP 145 (359)
Q Consensus 70 y~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p 145 (359)
+..+.+++.+.+. ++|+|+|||+ ++.++++.|+ +|+|+|.++.++..|+++.+.|+.. ++++++|+.+.-.+
T Consensus 107 t~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~ 182 (254)
T 2nxc_A 107 TRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPF 182 (254)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGG
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcC
Confidence 3445667766654 4799999988 7777788875 9999999999999999999988876 99999999884335
Q ss_pred CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 146 EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 146 ~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+++|+||+..+- +...+.+..+.+.|||||+++=
T Consensus 183 ~~fD~Vv~n~~~-----~~~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 183 GPFDLLVANLYA-----ELHAALAPRYREALVPGGRALL 216 (254)
T ss_dssp CCEEEEEEECCH-----HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECCcH-----HHHHHHHHHHHHHcCCCCEEEE
Confidence 689999986432 1245678888999999999764
No 64
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.01 E-value=5e-10 Score=102.01 Aligned_cols=98 Identities=15% Similarity=0.057 Sum_probs=73.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cCC-CCccEEEecccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DAP-EKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~p-~k~DiIVSEllG 157 (359)
.+|||+|||+ ++...++.+.. +|+|||.|+.|++.|+++.+.++ .+|+++++|++++ .++ +++|+|++...+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCC-eEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 3799999998 55555555555 89999999999999999887654 6799999999998 544 689999984322
Q ss_pred -ccCCCC--ChHHHHHHHhhccCCCeEEE
Q 039233 158 -SFGDNE--LSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 158 -s~~~~E--l~~e~L~~a~r~Lkp~Gi~I 183 (359)
...+.. ....+|..+.+.|||||+++
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEE
Confidence 111111 12245788899999999976
No 65
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.00 E-value=1.1e-09 Score=97.70 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=76.7
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecc-cc
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSEL-LG 157 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEl-lG 157 (359)
.+|+|+|||+ +..++.+.+...+|++||.|+.+++.|+++.+.++.. +|+++.+|+.++..+ +++|+|++-. +.
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSCEEEEEEESCGG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCCeeEEEeehhhh
Confidence 3799999998 3444555445559999999999999999999888776 599999999998654 5799999732 22
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.+ .....+|..+.+.|||||.++=
T Consensus 118 ~~---~~~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 118 EL---SEPLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp GC---SSHHHHHHHHHHHEEEEEEEEE
T ss_pred hc---CCHHHHHHHHHHHhCCCeEEEE
Confidence 22 2346788999999999999763
No 66
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.00 E-value=7.1e-10 Score=100.12 Aligned_cols=103 Identities=12% Similarity=0.156 Sum_probs=74.7
Q ss_pred ccCCcCChhH--HHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cCC-----CCccEEE
Q 039233 83 DRVPDEEASS--LTTAAEE-TGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DAP-----EKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~-aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~p-----~k~DiIV 152 (359)
.+|+|+|||+ ++...++ .+...+|+|||.|+.+++.|+++++.+++.++|+++.+|+.+. .++ +++|+|+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~ 139 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVF 139 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEE
Confidence 4799999987 4444444 3334599999999999999999999999998999999999774 233 5899999
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEEccccc
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
+...... .....+.+..+ +.|||||+++=+...
T Consensus 140 ~d~~~~~--~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 140 LDHWKDR--YLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp ECSCGGG--HHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EcCCccc--chHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 6431110 00011344445 899999998876655
No 67
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.00 E-value=6.2e-10 Score=98.82 Aligned_cols=94 Identities=21% Similarity=0.283 Sum_probs=75.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
++|+|+|||+ ++..+++.|.. +|+|+|.|+.+++.|+++.+.++..+ |+++++|+.+. .++++|+|++...-
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~-~~~~fD~i~~~~~~--- 135 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGAK-SVLATDISDESMTAAEENAALNGIYD-IALQKTSLLAD-VDGKFDLIVANILA--- 135 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTT-CCSCEEEEEEESCH---
T ss_pred CEEEEECCCCCHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHcCCCc-eEEEecccccc-CCCCceEEEECCcH---
Confidence 4799999998 55555666655 99999999999999999999888877 99999999885 45799999985321
Q ss_pred CCCChHHHHHHHhhccCCCeEEEc
Q 039233 161 DNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+.....+..+.+.|||||+++=
T Consensus 136 --~~~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 136 --EILLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp --HHHHHHGGGSGGGEEEEEEEEE
T ss_pred --HHHHHHHHHHHHhcCCCCEEEE
Confidence 1234566777899999999764
No 68
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.00 E-value=1.2e-09 Score=97.60 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=76.9
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cCCCCccEEEecccc
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DAPEKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~p~k~DiIVSEllG 157 (359)
.+|+|+|||+ .+...+++ +...+|++||.|+.+++.|+++++.+++.++|+++++|+.++ .+++ +|+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~-- 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC-- 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET--
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC--
Confidence 4799999998 44433333 213599999999999999999999888888999999999875 2345 99999751
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
..+..++.+..+.+.|||||+++=..
T Consensus 135 ---~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 ---DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ---TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred ---ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 23446778999999999999987543
No 69
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.99 E-value=2.8e-09 Score=100.46 Aligned_cols=126 Identities=13% Similarity=0.084 Sum_probs=88.6
Q ss_pred ccCcHHHHHHHhcCcccHHHHHHHHHHhhc---ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc
Q 039233 53 DNLEAQTYETFEKDSVKYIQYQRAIGNALV---DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE 126 (359)
Q Consensus 53 dnL~s~~Ye~f~~D~vry~~Y~~AI~~~~~---d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n 126 (359)
.+.++..|..+-.. .. ....+.|..... .+|||+|||+ ++ .+|.+.+...+|+|||.|+.+++.|+++.+.+
T Consensus 7 ~~~~~~~y~~~rp~-y~-~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 84 (299)
T 3g5t_A 7 SDFNSERYSSSRPS-YP-SDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS 84 (299)
T ss_dssp TTCCHHHHHHHSCC-CC-HHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC
T ss_pred cccChHHHhhcCCC-CC-HHHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 35667777776322 22 223344444432 3799999998 44 44443222349999999999999999998875
Q ss_pred -CCCCeEEEEeCccccccCC-------CCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 127 -GWEKTVTIVSCDMRCWDAP-------EKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 127 -~~~~~V~vi~~d~~~~~~p-------~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+...+|+++++|++++..+ +++|+|++-. +..+ ....+|..+.+.|||||.++=
T Consensus 85 ~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 85 PDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp C-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 4567899999999997644 4899999733 2333 356788999999999999764
No 70
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.99 E-value=9.3e-10 Score=98.96 Aligned_cols=98 Identities=10% Similarity=0.025 Sum_probs=76.2
Q ss_pred ccCCcCChhH--HHH-HHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC------CCCccEEEe
Q 039233 83 DRVPDEEASS--LTT-AAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA------PEKADILVS 153 (359)
Q Consensus 83 d~v~D~g~Gt--l~~-~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~------p~k~DiIVS 153 (359)
.+|+|+|||+ .+. +|...+...+|++||.++.++..|+++++..++.++|+++.+|+.+... .+++|+|++
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~ 139 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFI 139 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEE
Confidence 4799999998 443 3443332359999999999999999999999999999999999987521 157999996
Q ss_pred ccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 154 ELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 154 EllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
... .+..++.+..+.+.|||||+++=.
T Consensus 140 d~~-----~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 140 DAD-----KQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp CSC-----GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred cCC-----cHHHHHHHHHHHHhcCCCcEEEEe
Confidence 422 223567889999999999987743
No 71
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.98 E-value=9e-10 Score=106.82 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=77.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC-eEEEEeCccccccC-----CCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEK-TVTIVSCDMRCWDA-----PEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~-~V~vi~~d~~~~~~-----p~k~DiIVSE 154 (359)
.+|||+|||+ ++..+++.|+ +|+|||.|+.|++.|++|++.|++.+ +|+++++|+.++.. .+++|+||+.
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 3799999998 7777777774 99999999999999999999999987 59999999988632 4689999986
Q ss_pred cc--cccCCC------CChHHHHHHHhhccCCCeEE
Q 039233 155 LL--GSFGDN------ELSPECLDGAQRFLKQDGIS 182 (359)
Q Consensus 155 ll--Gs~~~~------El~~e~L~~a~r~Lkp~Gi~ 182 (359)
.- +..-.. +...+++..+.+.|||||++
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~l 268 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALG 268 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCE
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEE
Confidence 53 211011 12356788889999999983
No 72
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.98 E-value=1.4e-09 Score=100.54 Aligned_cols=99 Identities=16% Similarity=0.158 Sum_probs=76.9
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cC--CCCccEEEecc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DA--PEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~--p~k~DiIVSEl 155 (359)
.+|||+|||+ .+ .+|...+...+|++||.|+.++..|+++++.+++.++|+++.+|+.+. .+ .+++|+|++..
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~ 144 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDA 144 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECS
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECC
Confidence 4799999998 44 334443323599999999999999999999999998999999999874 22 24899999632
Q ss_pred ccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 156 LGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
..+..+..|..+.+.|||||+++=..
T Consensus 145 -----~~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 145 -----DKPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp -----CGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred -----chHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 22335678889999999999987543
No 73
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.98 E-value=2.2e-10 Score=104.51 Aligned_cols=98 Identities=15% Similarity=0.231 Sum_probs=74.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCC-CccEEEecc-ccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPE-KADILVSEL-LGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~-k~DiIVSEl-lGs 158 (359)
.+|||+|||+ ++...++.+.. +|++||.|+.+++.|+++...++ ..+++++.+|+.++..+. ++|+|++.. +..
T Consensus 81 ~~vLDiGcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 81 SCALDCGAGIGRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp SEEEEETCTTTHHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 3689999998 55544444434 99999999999999999987654 457999999999987654 799999743 222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+. ++...++|..+.+.|||||+++
T Consensus 159 ~~-~~~~~~~l~~~~~~LkpgG~l~ 182 (241)
T 2ex4_A 159 LT-DQHLAEFLRRCKGSLRPNGIIV 182 (241)
T ss_dssp SC-HHHHHHHHHHHHHHEEEEEEEE
T ss_pred CC-HHHHHHHHHHHHHhcCCCeEEE
Confidence 22 2223468888899999999865
No 74
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.97 E-value=1.5e-09 Score=101.80 Aligned_cols=96 Identities=16% Similarity=0.124 Sum_probs=74.9
Q ss_pred ccCCcCChhH--HHHH-HHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccc
Q 039233 83 DRVPDEEASS--LTTA-AEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~-A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs 158 (359)
.+|||+|||+ ++.. |.+.+...+|+|+|.|+.++..|+++....+. +|+++.+|+.++..++++|+|++.. +..
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 101 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIELNDKYDIAICHAFLLH 101 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCCSSCEEEEEEESCGGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCcCCCeeEEEECChhhc
Confidence 3689999998 4443 33333224999999999999999999876443 7999999999988888999999743 233
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+ ....++|..+.+.|||||.++
T Consensus 102 ~---~~~~~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 102 M---TTPETMLQKMIHSVKKGGKII 123 (284)
T ss_dssp C---SSHHHHHHHHHHTEEEEEEEE
T ss_pred C---CCHHHHHHHHHHHcCCCCEEE
Confidence 3 234678899999999999976
No 75
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.97 E-value=1.3e-09 Score=108.66 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=73.5
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHH-------HhcCCC-CeEEEEeCccccccCC---CCc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLV-------RLEGWE-KTVTIVSCDMRCWDAP---EKA 148 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~-------~~n~~~-~~V~vi~~d~~~~~~p---~k~ 148 (359)
++|+|+|||+ ++ .+|.+.|++ +|+|||.++.++..|++++ +.+|.. ++|+++++|+.++..+ ..+
T Consensus 175 d~VLDLGCGtG~l~l~lA~~~g~~-kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~a 253 (438)
T 3uwp_A 175 DLFVDLGSGVGQVVLQVAAATNCK-HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANT 253 (438)
T ss_dssp CEEEEESCTTSHHHHHHHHHCCCS-EEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTC
T ss_pred CEEEEeCCCCCHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCc
Confidence 4789999998 44 455567766 8999999999999999865 335553 7899999999987543 379
Q ss_pred cEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 149 DILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 149 DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+|+++.. .|. +...+.|....+.|||||++|
T Consensus 254 DVVf~Nn~-~F~--pdl~~aL~Ei~RvLKPGGrIV 285 (438)
T 3uwp_A 254 SVIFVNNF-AFG--PEVDHQLKERFANMKEGGRIV 285 (438)
T ss_dssp SEEEECCT-TCC--HHHHHHHHHHHTTSCTTCEEE
T ss_pred cEEEEccc-ccC--chHHHHHHHHHHcCCCCcEEE
Confidence 99997532 122 224456777789999999977
No 76
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.97 E-value=2.8e-10 Score=101.96 Aligned_cols=96 Identities=10% Similarity=0.038 Sum_probs=69.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC-----------CCCeEEEEeCccccccCC--CC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG-----------WEKTVTIVSCDMRCWDAP--EK 147 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~-----------~~~~V~vi~~d~~~~~~p--~k 147 (359)
.+|||+|||+ .+...++.| .+|+|||.|+.|++.|+++..... -..+|+++++|+.++..+ ++
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 4799999998 444334446 499999999999999998754210 134699999999998754 68
Q ss_pred ccEEEecc-ccccCCCCChHHHHHHHhhccCCCeE
Q 039233 148 ADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGI 181 (359)
Q Consensus 148 ~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi 181 (359)
+|+|++-. +..+ ..+.....+..+.+.|||||+
T Consensus 102 fD~v~~~~~l~~l-~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 102 CAAFYDRAAMIAL-PADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHHHHSCSEEE
T ss_pred EEEEEECcchhhC-CHHHHHHHHHHHHHHcCCCcE
Confidence 99999732 2222 222234477888999999997
No 77
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.96 E-value=6.8e-10 Score=100.16 Aligned_cols=120 Identities=15% Similarity=0.153 Sum_probs=83.6
Q ss_pred HHHHHHHhcCc-ccHHHHHHHHHHhh----c--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC
Q 039233 57 AQTYETFEKDS-VKYIQYQRAIGNAL----V--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG 127 (359)
Q Consensus 57 s~~Ye~f~~D~-vry~~Y~~AI~~~~----~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~ 127 (359)
+..|+.+..+. ..|....+.+...+ . .+|+|+|||+ ++...++.+. +|+|+|.|+.++..|+++.
T Consensus 9 a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~---- 82 (239)
T 3bxo_A 9 ADVYDLFYLGRGKDYAAEASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL---- 82 (239)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC----
T ss_pred HHHHHHHhhccHhhHHHHHHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC----
Confidence 45677775432 45555544443333 2 3689999998 4444444442 8999999999999988763
Q ss_pred CCCeEEEEeCccccccCCCCccEEEe-c-cccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 128 WEKTVTIVSCDMRCWDAPEKADILVS-E-LLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 128 ~~~~V~vi~~d~~~~~~p~k~DiIVS-E-llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.+++++.+|+.++..++++|+|+| - .+..+.+.+...++|..+.+.|||||.++=
T Consensus 83 --~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (239)
T 3bxo_A 83 --PDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVV 139 (239)
T ss_dssp --TTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred --CCCEEEECCHHHcccCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 248999999999877789999995 1 333333223446688889999999999764
No 78
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.96 E-value=2.3e-09 Score=101.48 Aligned_cols=98 Identities=13% Similarity=0.137 Sum_probs=74.2
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCc---cEEEecc--
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKA---DILVSEL-- 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~---DiIVSEl-- 155 (359)
.+|+|+|||+ ++...++.+ ..+|+|||.|+.|++.|++|.+.+++.++|+++++|+.+. +++++ |+|||+.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~~~f~~~D~IvsnPPy 202 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFS-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FKEKFASIEMILSNPPY 202 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHS-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GGGGTTTCCEEEECCCC
T ss_pred CEEEEEeCchhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cccccCCCCEEEEcCCC
Confidence 4799999998 554444443 3499999999999999999999999998999999999884 33578 9999962
Q ss_pred cc-------cc---------CCCCChHHHHHHHh-hccCCCeEEE
Q 039233 156 LG-------SF---------GDNELSPECLDGAQ-RFLKQDGISI 183 (359)
Q Consensus 156 lG-------s~---------~~~El~~e~L~~a~-r~Lkp~Gi~I 183 (359)
.+ .. +.... .+++..+. +.|+|||.++
T Consensus 203 i~~~~~l~~~v~~ep~~al~~~~dg-l~~~~~i~~~~l~pgG~l~ 246 (284)
T 1nv8_A 203 VKSSAHLPKDVLFEPPEALFGGEDG-LDFYREFFGRYDTSGKIVL 246 (284)
T ss_dssp BCGGGSCTTSCCCSCHHHHBCTTTS-CHHHHHHHHHCCCTTCEEE
T ss_pred CCcccccChhhccCcHHHhcCCCcH-HHHHHHHHHhcCCCCCEEE
Confidence 11 00 11111 15778888 9999999976
No 79
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.96 E-value=1.1e-09 Score=95.00 Aligned_cols=99 Identities=13% Similarity=0.142 Sum_probs=76.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC-eEEEEeCccccccCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEK-TVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~-~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++..+++.+ .+|+|+|.|+.++..|+++...++..+ +++++.+|+.+...++++|+|++...-..
T Consensus 54 ~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 131 (194)
T 1dus_A 54 DDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPIRA 131 (194)
T ss_dssp CEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCCSTT
T ss_pred CeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCCccc
Confidence 3799999987 555544443 499999999999999999999888876 79999999998666678999998432111
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
..+...+++..+.+.|||||.++=
T Consensus 132 -~~~~~~~~l~~~~~~L~~gG~l~~ 155 (194)
T 1dus_A 132 -GKEVLHRIIEEGKELLKDNGEIWV 155 (194)
T ss_dssp -CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -chhHHHHHHHHHHHHcCCCCEEEE
Confidence 112345688888999999998653
No 80
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.96 E-value=4.9e-10 Score=100.77 Aligned_cols=96 Identities=7% Similarity=0.059 Sum_probs=75.5
Q ss_pred ccCCcCChhH--HHH-HHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CC-----CCccEEE
Q 039233 83 DRVPDEEASS--LTT-AAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--AP-----EKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt--l~~-~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p-----~k~DiIV 152 (359)
.+|+|+|||+ .+. +|.+.+...+|++||.|+.+++.|+++++.+++.++|+++++|+.+.- ++ +++|+|+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~ 145 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIY 145 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEE
Confidence 4799999987 443 343333235999999999999999999999999999999999997752 22 6899999
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+.. ..+...+.+..+.+.|||||+++
T Consensus 146 ~~~-----~~~~~~~~l~~~~~~L~pgG~lv 171 (225)
T 3tr6_A 146 IDA-----DKANTDLYYEESLKLLREGGLIA 171 (225)
T ss_dssp ECS-----CGGGHHHHHHHHHHHEEEEEEEE
T ss_pred ECC-----CHHHHHHHHHHHHHhcCCCcEEE
Confidence 532 12335668888999999999987
No 81
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.96 E-value=2e-09 Score=95.06 Aligned_cols=96 Identities=16% Similarity=0.182 Sum_probs=74.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++...++.| .+|+|||.|+.+++.|+++...++. +++++.+|+.++..+ +++|+|++- +..+
T Consensus 31 ~~vLdiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~-~~~~ 105 (202)
T 2kw5_A 31 GKILCLAEGEGRNACFLASLG--YEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSI-FCHL 105 (202)
T ss_dssp SEEEECCCSCTHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEE-CCCC
T ss_pred CCEEEECCCCCHhHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEE-hhcC
Confidence 4899999987 555555555 4999999999999999999887655 699999999998754 689999983 2222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
..+...+.|..+.+.|||||.++=
T Consensus 106 -~~~~~~~~l~~~~~~L~pgG~l~~ 129 (202)
T 2kw5_A 106 -PSSLRQQLYPKVYQGLKPGGVFIL 129 (202)
T ss_dssp -CHHHHHHHHHHHHTTCCSSEEEEE
T ss_pred -CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 222345678888999999998653
No 82
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.96 E-value=1.1e-09 Score=99.78 Aligned_cols=100 Identities=8% Similarity=-0.004 Sum_probs=75.1
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc----cCCCCccEEEeccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW----DAPEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~----~~p~k~DiIVSEll 156 (359)
.+|+|+|||+ ++...++.+...+|+|||.++.++..|+++++.++..+ |+++.+|++++ -.+..+|.|++-..
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHSCTTCEEEEEEESC
T ss_pred CeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHcCCCChheEEEeCC
Confidence 4789999998 44333333344589999999999999999999888877 99999999985 24578999997432
Q ss_pred cccCC------CCChHHHHHHHhhccCCCeEEE
Q 039233 157 GSFGD------NELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 157 Gs~~~------~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...-. ....++.+..+.+.|||||+++
T Consensus 115 ~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~ 147 (218)
T 3dxy_A 115 DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFH 147 (218)
T ss_dssp CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEE
T ss_pred CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEE
Confidence 32211 1123468899999999999854
No 83
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.95 E-value=1.7e-10 Score=105.05 Aligned_cols=98 Identities=17% Similarity=0.179 Sum_probs=75.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccc-ccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELL-GSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEll-Gs~ 159 (359)
++|+|+|||+ ++..+++.| .+|+|||.|+.|++.|+++++.++..++|+++++|+.++..++++|+|++... +..
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGP 157 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSSG
T ss_pred CEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCCc
Confidence 4799999998 666656666 49999999999999999999998887789999999999877779999998532 222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.+. ...+..+.+.|||||++|-.
T Consensus 158 ~~~---~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 158 DYA---TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GGG---GSSSBCTTTSCSSCHHHHHH
T ss_pred chh---hhHHHHHHhhcCCcceeHHH
Confidence 211 11334556889999975533
No 84
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.95 E-value=1.6e-09 Score=98.00 Aligned_cols=93 Identities=25% Similarity=0.242 Sum_probs=68.1
Q ss_pred ccCCcCChhH--H-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc----cCCCCccEEEecc
Q 039233 83 DRVPDEEASS--L-TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW----DAPEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l-~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~----~~p~k~DiIVSEl 155 (359)
++|||+|||+ + ..+|.+.| +.+|+|||.|+.|++.+.++.+.. .+|+++.+|+++. ..++++|+|++..
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDLIYQDI 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred CEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeEEEEec
Confidence 3799999998 3 45666665 449999999999887776665542 3589999999884 3457899999863
Q ss_pred ccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 156 LGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...+....+|..+.+.|||||.++
T Consensus 135 ----~~~~~~~~~l~~~~r~LkpgG~l~ 158 (210)
T 1nt2_A 135 ----AQKNQIEILKANAEFFLKEKGEVV 158 (210)
T ss_dssp ----CSTTHHHHHHHHHHHHEEEEEEEE
T ss_pred ----cChhHHHHHHHHHHHHhCCCCEEE
Confidence 222222234788899999999865
No 85
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.95 E-value=1e-09 Score=102.23 Aligned_cols=100 Identities=17% Similarity=0.099 Sum_probs=77.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC--CCCccEEEecc-cc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA--PEKADILVSEL-LG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~--p~k~DiIVSEl-lG 157 (359)
.+|||+|||+ ++..+++.|.. +|+|||.|+.++..|+++....+...+|+++.+|+.+... ++++|+|++.. +.
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 144 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIG-EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFH 144 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCS-EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGG
T ss_pred CeEEEECCCCCHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhh
Confidence 3799999997 44444455644 9999999999999999999888887889999999998754 56899999742 21
Q ss_pred cc-CCCCChHHHHHHHhhccCCCeEEE
Q 039233 158 SF-GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 158 s~-~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.. ...+...++|..+.+.|||||+++
T Consensus 145 ~~~~~~~~~~~~l~~~~~~LkpgG~l~ 171 (298)
T 1ri5_A 145 YAFSTSESLDIAQRNIARHLRPGGYFI 171 (298)
T ss_dssp GGGSSHHHHHHHHHHHHHTEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 11 112234567888899999999976
No 86
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.95 E-value=1.2e-09 Score=99.46 Aligned_cols=94 Identities=18% Similarity=0.252 Sum_probs=71.8
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc----ccCCCCccEEEecc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC----WDAPEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~----~~~p~k~DiIVSEl 155 (359)
++|+|+|||+ ++ .+|.+.|.. +|+|||.|+.|+..|+++.+.+ .+|+++.+|+++ ..+++++|+|+.++
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~-~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKG-IVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIVEKVDVIYEDV 151 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTS-EEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTSCCEEEEEECC
T ss_pred CEEEEEcccCCHHHHHHHHHcCCc-EEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccCccEEEEEEec
Confidence 3689999987 44 455565644 9999999999999999987654 569999999998 55557899999543
Q ss_pred ccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 156 LGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
...+....+|..+.+.|||||+++=
T Consensus 152 ----~~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 152 ----AQPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp ----CSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----CChhHHHHHHHHHHHhCCCCcEEEE
Confidence 1222235568888999999998653
No 87
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.95 E-value=1.2e-09 Score=97.50 Aligned_cols=94 Identities=16% Similarity=0.252 Sum_probs=70.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-cccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~ 159 (359)
.+|||+|||+ ++...++.| .+|++||.|+.+++.|+++.. .+|+++.+|+.++..++++|+|++-. +..+
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAG--RTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSIDTIVSTYAFHHL 119 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTT--CEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCSEEEEESCGGGS
T ss_pred CeEEEeCCCCCHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeEEEEECcchhcC
Confidence 4799999998 554444444 499999999999999888743 56999999999987778999999732 2222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
. +.....+|..+.+.|||||.++=
T Consensus 120 ~-~~~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 120 T-DDEKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp C-HHHHHHHHHHHHHHSCTTCEEEE
T ss_pred C-hHHHHHHHHHHHHhcCCCCEEEE
Confidence 2 21123378888999999999764
No 88
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.95 E-value=5.6e-10 Score=98.75 Aligned_cols=110 Identities=16% Similarity=0.184 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC
Q 039233 70 YIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP 145 (359)
Q Consensus 70 y~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p 145 (359)
+....+.|...+. ++|+|+|||+ ++..+++.|.. +|+|+|.|+.+++.|+++... ..+|+++.+|+.++..+
T Consensus 29 ~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~ 104 (215)
T 2pxx_A 29 FSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFP 104 (215)
T ss_dssp HHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSC
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCC
Confidence 4445555555543 4799999998 66666666766 999999999999999988653 24699999999998654
Q ss_pred -CCccEEEecc-ccccCC------------CCChHHHHHHHhhccCCCeEEE
Q 039233 146 -EKADILVSEL-LGSFGD------------NELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 146 -~k~DiIVSEl-lGs~~~------------~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+++|+|++.. ++.+.. .+...++|..+.+.|||||+++
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 156 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFI 156 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEE
Confidence 6899999743 222210 1123567888899999999865
No 89
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.94 E-value=1.9e-09 Score=101.14 Aligned_cols=97 Identities=14% Similarity=0.096 Sum_probs=77.4
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEec-ccc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSE-LLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSE-llG 157 (359)
.+|||+|||+ ++ .+|.+.| .+|++||.|+.++..|+++.+..++.++|+++.+|+.++..+ +++|+|++. .+.
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 161 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFL 161 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhh
Confidence 3699999997 33 4444445 399999999999999999998888988999999999998654 579999973 233
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.+.+ ...+|..+.+.|||||+++=
T Consensus 162 ~~~~---~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 162 HSPD---KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp GCSC---HHHHHHHHHHHEEEEEEEEE
T ss_pred hcCC---HHHHHHHHHHHcCCCeEEEE
Confidence 3332 56788999999999998763
No 90
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.94 E-value=9.4e-10 Score=105.01 Aligned_cols=103 Identities=16% Similarity=0.226 Sum_probs=74.0
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcC---C-CCeEEEEeCcccccc--CCCCccEEEe
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEG---W-EKTVTIVSCDMRCWD--APEKADILVS 153 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~---~-~~~V~vi~~d~~~~~--~p~k~DiIVS 153 (359)
.+|||+|||+ ++...++. +.. +|++||+|+.+++.|++++...+ + ..+|+++.+|.+++- ..+++|+||+
T Consensus 85 ~~VLdiG~G~G~~~~~l~~~~~~~-~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 85 KHVLIIGGGDGAMLREVTRHKNVE-SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CEEEEESCTTCHHHHHHHTCTTCC-EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CEEEEEeCChhHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 4799999987 55555554 444 99999999999999999876532 3 348999999998862 3578999999
Q ss_pred ccccccCCCCC--hHHHHHHHhhccCCCeEEEccc
Q 039233 154 ELLGSFGDNEL--SPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 154 EllGs~~~~El--~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
......+..+. ..+.+..+.+.|||||+++=+.
T Consensus 164 D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 77655443332 3678899999999999988554
No 91
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.94 E-value=1.4e-09 Score=99.59 Aligned_cols=94 Identities=15% Similarity=0.075 Sum_probs=74.5
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEeccccccC
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGSFG 160 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs~~ 160 (359)
+|||+|||+ ++...++.|.+ +|+|+|.|+.+++.|+++.. ..+|+++.+|+.++..+ +++|+|++-. .+.
T Consensus 47 ~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~l~ 119 (253)
T 3g5l_A 47 TVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAYNVVLSSL--ALH 119 (253)
T ss_dssp EEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCEEEEEEES--CGG
T ss_pred EEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCeEEEEEch--hhh
Confidence 689999998 66666667766 99999999999999988754 46799999999998764 7899999732 222
Q ss_pred CCCChHHHHHHHhhccCCCeEEEc
Q 039233 161 DNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.-+...++|..+.+.|||||.++=
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 120 YIASFDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhHHHHHHHHHHHcCCCcEEEE
Confidence 123356788999999999999763
No 92
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.94 E-value=1.3e-09 Score=96.36 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=80.1
Q ss_pred CcccHHHHHHHHHHhhc-ccCCcCChhH--H-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc
Q 039233 66 DSVKYIQYQRAIGNALV-DRVPDEEASS--L-TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC 141 (359)
Q Consensus 66 D~vry~~Y~~AI~~~~~-d~v~D~g~Gt--l-~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~ 141 (359)
|...+..+.+.+...-. .+|+|+|||+ + ..++++.| .+|+|||.|+.|++.|+++...++ .+++++.+|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~ 82 (209)
T 2p8j_A 7 RQPQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRK 82 (209)
T ss_dssp SCTHHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTS
T ss_pred hhhhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhh
Confidence 34455555444433222 4799999997 2 33444554 499999999999999999987654 469999999999
Q ss_pred ccCC-CCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 142 WDAP-EKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 142 ~~~p-~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+..+ +++|+|++-. +..+ ..+....+|..+.+.|||||.++=
T Consensus 83 ~~~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 83 LPFKDESMSFVYSYGTIFHM-RKNDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp CCSCTTCEEEEEECSCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCceeEEEEcChHHhC-CHHHHHHHHHHHHHHcCCCcEEEE
Confidence 8754 6799999732 2222 113345678888999999999763
No 93
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.94 E-value=6.4e-10 Score=95.02 Aligned_cols=96 Identities=21% Similarity=0.222 Sum_probs=73.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C---CCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A---PEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~---p~k~DiIVSEl 155 (359)
++|+|+|||+ ++..+++.|+ +|+|||.|+.+++.|+++++.++. +++++++|+.+.. . .+++|+|++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 4799999998 6666666664 599999999999999999998877 6999999998852 1 23799999854
Q ss_pred ccccCCCCChHHHHHHHh--hccCCCeEEEccc
Q 039233 156 LGSFGDNELSPECLDGAQ--RFLKQDGISIPSS 186 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~--r~Lkp~Gi~IP~~ 186 (359)
. +. ...++.+.... +.|||||+++-+.
T Consensus 119 ~--~~--~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 119 P--YA--MDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp C--TT--SCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred C--Cc--hhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 2 22 23455666666 9999999876443
No 94
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.94 E-value=2.1e-09 Score=98.85 Aligned_cols=96 Identities=19% Similarity=0.225 Sum_probs=75.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecc-ccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSEL-LGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEl-lGs 158 (359)
.+|+|+|||+ ++...++.+ . +|++||.|+.+++.|+++.+.+++.+ |+++.+|++++..+ +.+|+|+|-. +..
T Consensus 39 ~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~-v~~~~~d~~~l~~~~~~fD~V~~~~~l~~ 115 (260)
T 1vl5_A 39 EEVLDVATGGGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQ-VEYVQGDAEQMPFTDERFHIVTCRIAAHH 115 (260)
T ss_dssp CEEEEETCTTCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCC-CCCSCTTCEEEEEEESCGGG
T ss_pred CEEEEEeCCCCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCc-eEEEEecHHhCCCCCCCEEEEEEhhhhHh
Confidence 4799999998 555555555 2 99999999999999999998877764 99999999998765 6899999842 222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+. ....+|..+.+.|||||.++=
T Consensus 116 ~~---d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 116 FP---NPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp CS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred cC---CHHHHHHHHHHHcCCCCEEEE
Confidence 22 246788999999999998653
No 95
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.94 E-value=1.2e-09 Score=101.80 Aligned_cols=99 Identities=12% Similarity=0.010 Sum_probs=72.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh----------cC------CCCeEEEEeCccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL----------EG------WEKTVTIVSCDMRCWDA 144 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~----------n~------~~~~V~vi~~d~~~~~~ 144 (359)
.+|||+|||+ .+...++.| .+|+|||.|+.|++.|+++... ++ -..+|+++++|+.++..
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 4799999998 554445556 4899999999999999876431 11 13569999999999876
Q ss_pred C--CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 145 P--EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 145 p--~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+ +++|+|++-..=.....+.....+..+.+.|||||+++
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 4 78999997321112233334557888899999999974
No 96
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.93 E-value=2.9e-09 Score=98.61 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=77.2
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cC------CCCccEE
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DA------PEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~------p~k~DiI 151 (359)
.+|+|+|||+ .+ .+|...+...+|++||.|+.+++.|+++++..++.++|+++.+|+.++ .+ .+++|+|
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V 160 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFI 160 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEE
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEE
Confidence 4799999988 33 344443323599999999999999999999989988999999999875 22 4789999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
++.. ..+..++.+..+.+.|||||+++=+
T Consensus 161 ~~d~-----~~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 161 FVDA-----DKDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EECS-----CSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEcC-----chHHHHHHHHHHHHhCCCCeEEEEe
Confidence 9742 1234677889999999999998754
No 97
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.93 E-value=1.6e-09 Score=107.46 Aligned_cols=96 Identities=16% Similarity=0.143 Sum_probs=77.4
Q ss_pred ccCCcCChhH--HHHHHHH-c-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCe-EEEEeCccccc---cCCCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEE-T-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKT-VTIVSCDMRCW---DAPEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~-a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~-V~vi~~d~~~~---~~p~k~DiIVSE 154 (359)
++|+|++||| ++..|++ . |++ +|+|||+|+.|++.|++|++.|+++++ ++++++|+.++ ...+++|+|+..
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~-~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVE-KAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEE-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CEEEECCCcccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 4799998877 6655444 3 556 999999999999999999999999988 99999999885 335689999977
Q ss_pred cccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 155 LLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 155 llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
..|+ ..+.++.+.+.|++||+++=+
T Consensus 133 P~g~------~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 133 PFGT------PVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp CSSC------CHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcC------HHHHHHHHHHHhCCCCEEEEE
Confidence 6332 245889999999999986443
No 98
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.93 E-value=1.5e-09 Score=106.90 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=78.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC--eEEEEeCccccccCCCCccEEEeccc-c
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEK--TVTIVSCDMRCWDAPEKADILVSELL-G 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~--~V~vi~~d~~~~~~p~k~DiIVSEll-G 157 (359)
++|+|+|||+ ++..+++.+...+|++||.|+.|++.|+++.+.|++.+ +|+++.+|+.+...++++|+|++... .
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~nppfh 303 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 303 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECCCC-
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECCCcc
Confidence 4799999998 66666666544599999999999999999999998875 58889999998655678999998642 1
Q ss_pred c--cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 158 S--FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 158 s--~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
. ........++|..+.+.|||||+++
T Consensus 304 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 331 (375)
T 4dcm_A 304 QQHALTDNVAWEMFHHARRCLKINGELY 331 (375)
T ss_dssp ------CCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCcccCHHHHHHHHHHHHHhCCCCcEEE
Confidence 1 1123344568899999999999854
No 99
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.92 E-value=1e-09 Score=116.46 Aligned_cols=107 Identities=17% Similarity=0.256 Sum_probs=84.4
Q ss_pred HHHHHhhcc-cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCC-CeEEEEeCccccc--cCCCCc
Q 039233 75 RAIGNALVD-RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWE-KTVTIVSCDMRCW--DAPEKA 148 (359)
Q Consensus 75 ~AI~~~~~d-~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~-~~V~vi~~d~~~~--~~p~k~ 148 (359)
+.+....++ +|||+|||| ++..|++.|++ +|+|||.|+.|++.|++|++.|++. ++++++++|+.++ ...+++
T Consensus 532 ~~l~~~~~g~~VLDlg~GtG~~sl~aa~~ga~-~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~f 610 (703)
T 3v97_A 532 RMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR-STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQF 610 (703)
T ss_dssp HHHHHHCTTCEEEEESCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCE
T ss_pred HHHHHhcCCCcEEEeeechhHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCc
Confidence 444444443 799999988 78888888877 8999999999999999999999997 6899999999985 235689
Q ss_pred cEEEeccccccC----------CCCChHHHHHHHhhccCCCeEEE
Q 039233 149 DILVSELLGSFG----------DNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 149 DiIVSEllGs~~----------~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+||+..- +|. ......+++..+.+.|||||+++
T Consensus 611 D~Ii~DPP-~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~ 654 (703)
T 3v97_A 611 DLIFIDPP-TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 654 (703)
T ss_dssp EEEEECCC-SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cEEEECCc-cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 99998642 121 11123457888899999999988
No 100
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.92 E-value=3.4e-09 Score=95.68 Aligned_cols=99 Identities=10% Similarity=0.089 Sum_probs=73.7
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C-CCCccEEEeccc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A-PEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~-p~k~DiIVSEll 156 (359)
.+|+|+|||+ ++ .+|.+. ...+|+|||.|+.|+..|+++++.+++.+ |+++++|+.++. + +..+|.|++..-
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~n-v~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQN-VKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSS-EEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred ceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCC-EEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 4799999998 43 444443 34599999999999999999999888865 999999999864 2 457999886322
Q ss_pred cccCC------CCChHHHHHHHhhccCCCeEEE
Q 039233 157 GSFGD------NELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 157 Gs~~~------~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+.... ....+++|..+.+.|||||.++
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~ 150 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIH 150 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEE
Confidence 21110 1113668899999999999965
No 101
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.92 E-value=1.1e-09 Score=98.78 Aligned_cols=92 Identities=15% Similarity=0.134 Sum_probs=71.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-cccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~ 159 (359)
.+|||+|||+ ++...++.| .+|+|||.|+.+++.|+++... +|+++++|++++..++++|+|++.. +..+
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCEEEEEEESCGGGC
T ss_pred CcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCcccEEEEhhHHHhh
Confidence 3799999998 555555555 3899999999999999887532 6999999999986667899999732 2222
Q ss_pred CCCCChHHHHHHHh-hccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQ-RFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~-r~Lkp~Gi~IP 184 (359)
. ...++|..+. +.|||||.++=
T Consensus 117 ~---~~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 117 D---DPVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp S---SHHHHHHHHHHTTEEEEEEEEE
T ss_pred c---CHHHHHHHHHHHhcCCCCEEEE
Confidence 2 2457889999 99999998543
No 102
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.92 E-value=3.6e-09 Score=93.43 Aligned_cols=94 Identities=13% Similarity=0.019 Sum_probs=71.6
Q ss_pred cccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEeccccc
Q 039233 82 VDRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGS 158 (359)
Q Consensus 82 ~d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs 158 (359)
..+|||+|||+ ++...++.| .+|+|||.|+.+++.|+++. .+++++.+|+.++..+ +++|+|++-..-.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 113 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG--HQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLI 113 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT--CCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSST
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHh
Confidence 45799999998 555545555 38999999999999988762 2599999999998754 7899999732211
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
....+....+|..+.+.|||||.++
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~ 138 (203)
T 3h2b_A 114 HMGPGELPDALVALRMAVEDGGGLL 138 (203)
T ss_dssp TCCTTTHHHHHHHHHHTEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 2233446678999999999999975
No 103
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.92 E-value=2.4e-09 Score=96.59 Aligned_cols=93 Identities=18% Similarity=0.283 Sum_probs=70.6
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc----CCCCccEEEecc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD----APEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~----~p~k~DiIVSEl 155 (359)
++|+|+|||+ ++ .+|.+.|+..+|+|||.|+.|+..++++.+.+ .+|+++.+|+++.. .++++|+|++..
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 3689999997 44 44555565459999999999999999988754 56999999999842 356899999754
Q ss_pred ccccCCCCChHHH-HHHHhhccCCCeEEE
Q 039233 156 LGSFGDNELSPEC-LDGAQRFLKQDGISI 183 (359)
Q Consensus 156 lGs~~~~El~~e~-L~~a~r~Lkp~Gi~I 183 (359)
. .....+. +..+.+.|||||.++
T Consensus 152 ~-----~~~~~~~~l~~~~~~LkpgG~l~ 175 (227)
T 1g8a_A 152 A-----QPTQAKILIDNAEVYLKRGGYGM 175 (227)
T ss_dssp C-----STTHHHHHHHHHHHHEEEEEEEE
T ss_pred C-----CHhHHHHHHHHHHHhcCCCCEEE
Confidence 3 1223334 888899999999865
No 104
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.92 E-value=3.9e-09 Score=91.25 Aligned_cols=95 Identities=24% Similarity=0.181 Sum_probs=76.1
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-cCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-DAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-~~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++..+++.+ .+|+++|.|+.+++.|+++.+.++..++++++++|+.+. ....++|+|++.. .+
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~--~~ 110 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGG--SG 110 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESC--CT
T ss_pred CEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECC--ch
Confidence 4799999987 666666665 499999999999999999999888877899999999882 2225899999732 21
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+...++|..+.+.|+|||.++=
T Consensus 111 ---~~~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 111 ---GELQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp ---TCHHHHHHHHHHTEEEEEEEEE
T ss_pred ---HHHHHHHHHHHHhcCCCcEEEE
Confidence 2357789999999999998764
No 105
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.92 E-value=4e-09 Score=97.72 Aligned_cols=96 Identities=14% Similarity=0.195 Sum_probs=75.2
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCccEEEecc-cccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKADILVSEL-LGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~DiIVSEl-lGs~ 159 (359)
+|+|+|||+ ++...++.+...+|++||.|+.++..|+++...++..+ ++++.+|+.++.. ++++|+|++-. +..+
T Consensus 40 ~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 118 (276)
T 3mgg_A 40 KVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKN-VKFLQANIFSLPFEDSSFDHIFVCFVLEHL 118 (276)
T ss_dssp EEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCGGGCCSCTTCEEEEEEESCGGGC
T ss_pred eEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-cEEEEcccccCCCCCCCeeEEEEechhhhc
Confidence 689999997 55444444444599999999999999999998887764 9999999998765 46899999743 2222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
. ....+|..+.+.|||||.++
T Consensus 119 ~---~~~~~l~~~~~~L~pgG~l~ 139 (276)
T 3mgg_A 119 Q---SPEEALKSLKKVLKPGGTIT 139 (276)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEE
T ss_pred C---CHHHHHHHHHHHcCCCcEEE
Confidence 2 24568899999999999865
No 106
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.92 E-value=1.6e-09 Score=102.16 Aligned_cols=104 Identities=14% Similarity=0.156 Sum_probs=79.1
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHh--cCC-CCeEEEEeCccccc--cCCCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRL--EGW-EKTVTIVSCDMRCW--DAPEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~--n~~-~~~V~vi~~d~~~~--~~p~k~DiIVSE 154 (359)
.+|||+|||+ ++..+++. |.. +|++||+++.+++.|++++.. +++ ..+|+++.+|.+++ ..++++|+||+.
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~-~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 77 EHVLVVGGGDGGVIREILKHPSVK-KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CEEEEESCTTCHHHHHHTTCTTCS-EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CEEEEECCchHHHHHHHHhCCCCc-eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 4699999987 66555554 555 999999999999999998753 245 46899999999885 235789999997
Q ss_pred cccccCCCC-C-hHHHHHHHhhccCCCeEEEcccc
Q 039233 155 LLGSFGDNE-L-SPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 155 llGs~~~~E-l-~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
.....+..+ + ..+.+..+.+.|||||+++=+..
T Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 156 STEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp CSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 665433221 2 36788999999999999876543
No 107
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.92 E-value=9.9e-10 Score=99.05 Aligned_cols=99 Identities=12% Similarity=0.021 Sum_probs=76.9
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cCC-----CCccEEE
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DAP-----EKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~p-----~k~DiIV 152 (359)
.+|+|+|||+ .+...+++ +...+|++||.|+.+++.|+++++.+++.++|+++++|+.+. .++ +++|+|+
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~ 150 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAV 150 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEE
Confidence 4799999987 44444443 223499999999999999999999988988999999999775 221 6899999
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+..- .+...+.+..+.+.|||||+++=..
T Consensus 151 ~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 151 VDAD-----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp ECSC-----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCC-----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 7432 2335678889999999999977543
No 108
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.91 E-value=8.5e-10 Score=99.39 Aligned_cols=111 Identities=7% Similarity=-0.034 Sum_probs=79.2
Q ss_pred cHHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC
Q 039233 69 KYIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA 144 (359)
Q Consensus 69 ry~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~ 144 (359)
-++.+..++...+. ++|+|+|||+ ++...+.....++|+|+|.|+.|++.|+++.+.+|.++++++ .|..+-.+
T Consensus 35 ~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~ 112 (200)
T 3fzg_A 35 TLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVY 112 (200)
T ss_dssp GHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHT
T ss_pred hHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCC
Confidence 34444566666664 5899999998 666655554456999999999999999999999999988888 56555567
Q ss_pred CCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 145 PEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 145 p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++++|+|++--+=..+++. ...+..+.+.|||||++|
T Consensus 113 ~~~~DvVLa~k~LHlL~~~--~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 113 KGTYDVVFLLKMLPVLKQQ--DVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp TSEEEEEEEETCHHHHHHT--TCCHHHHHHTCEEEEEEE
T ss_pred CCCcChhhHhhHHHhhhhh--HHHHHHHHHHhCCCCEEE
Confidence 8899999962111112111 113445678899999854
No 109
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.91 E-value=2.3e-09 Score=97.95 Aligned_cols=97 Identities=14% Similarity=0.099 Sum_probs=75.8
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C-------------
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A------------- 144 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~------------- 144 (359)
++|+|+|||+ ++ .+|...+...+|++||.++.+++.|+++++.+++.++|+++.+|+.+.. .
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f 141 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDF 141 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccc
Confidence 4799999997 33 4445443234999999999999999999998889889999999997741 1
Q ss_pred --C-CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 145 --P-EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 145 --p-~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+ +++|+|++.. ..+..++.|..+.+.|||||+++=
T Consensus 142 ~~~~~~fD~I~~~~-----~~~~~~~~l~~~~~~L~pgG~lv~ 179 (239)
T 2hnk_A 142 AFGPSSIDLFFLDA-----DKENYPNYYPLILKLLKPGGLLIA 179 (239)
T ss_dssp CCSTTCEEEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCCcCEEEEeC-----CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 2 6899999742 123356788999999999999763
No 110
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.91 E-value=1.7e-09 Score=96.94 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=76.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCC----CCeEEEEeCccccccC-CCCccEEEec-
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGW----EKTVTIVSCDMRCWDA-PEKADILVSE- 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~----~~~V~vi~~d~~~~~~-p~k~DiIVSE- 154 (359)
++|+|+|||+ ++..+++.| .+|+|+|.|+.++..|+++...++. .++++++.+|+.++.. .+++|+|++-
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKG--YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CeEEEECCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc
Confidence 4799999998 555545555 4999999999999999999877665 3579999999999865 4679999973
Q ss_pred cccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 155 LLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 155 llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.+..+.+.+....+|..+.+.|||||.++=.
T Consensus 110 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 110 FLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 2233323222336888999999999997543
No 111
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.91 E-value=1.7e-09 Score=98.61 Aligned_cols=98 Identities=12% Similarity=0.034 Sum_probs=73.1
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs~ 159 (359)
.+|||+|||+ ++...++.+.. +|++||.|+.+++.|+++...+ .+++++.+|+.++..+ +++|+|++-..-..
T Consensus 95 ~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 95 SRALDCGAGIGRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp SEEEEETCTTTHHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CEEEEECCCcCHHHHHHHHhhcC-EEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 3689999997 55444444444 8999999999999999987643 6799999999998654 68999997432222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
...+...++|..+.+.|||||+++=
T Consensus 171 ~~~~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 2223346688889999999998663
No 112
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.91 E-value=2.3e-09 Score=103.52 Aligned_cols=102 Identities=13% Similarity=0.176 Sum_probs=77.0
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cC-CCCccEEEeccccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DA-PEKADILVSELLGS 158 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~-p~k~DiIVSEllGs 158 (359)
+|||+|||+ ++...++.-...+|++||+|+.+++.|++++..+ ...+|+++.+|.+++ .. .+++|+||+.....
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 699999987 5555444223359999999999999999987543 356899999999986 23 47899999976554
Q ss_pred cCCCC-C-hHHHHHHHhhccCCCeEEEccc
Q 039233 159 FGDNE-L-SPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 159 ~~~~E-l-~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
.+..+ + ..+.+..+.+.|||||+++=+.
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 33211 2 3678999999999999987443
No 113
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.90 E-value=2.6e-09 Score=99.90 Aligned_cols=100 Identities=17% Similarity=0.122 Sum_probs=74.1
Q ss_pred ccCCcCChhH--HHHHHH-HcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccc--c
Q 039233 83 DRVPDEEASS--LTTAAE-ETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELL--G 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~-~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEll--G 157 (359)
.+|+|+|||+ ++...+ +.+ ..+|+|+|.|+.|++.|+++.+.++.. +|+++++|+.+...++++|+|||..- +
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYID 188 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGTTCCEEEEEECCCCBC
T ss_pred CEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhcccCCccEEEECCCCCC
Confidence 4799999998 444433 443 349999999999999999999988876 59999999988644678999998521 0
Q ss_pred --------ccCCC-------------CChHHHHHHHhhccCCCeEEEc
Q 039233 158 --------SFGDN-------------ELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 158 --------s~~~~-------------El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
..... +....++..+.+.|||||.++=
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~ 236 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLL 236 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 00000 1234577888999999998663
No 114
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.90 E-value=2.1e-09 Score=104.04 Aligned_cols=95 Identities=25% Similarity=0.320 Sum_probs=77.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
++|+|+|||+ ++.. ++ |+. +|+|||.|+.|++.|++|++.|++.++++++++|+.++. +++|+||+.....
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~~~-~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~-- 269 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-NAK-KIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKF-- 269 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-TSS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTT--
T ss_pred CEEEEccCccCHHHHh-cc-CCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHh--
Confidence 4799999988 6655 55 555 999999999999999999999999878999999999975 7899999754321
Q ss_pred CCCChHHHHHHHhhccCCCeEEEccccc
Q 039233 161 DNELSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
..+.+..+.+.|+|||+++=..+.
T Consensus 270 ----~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 270 ----AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp ----GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ----HHHHHHHHHHHcCCCCEEEEEEee
Confidence 236888899999999987655443
No 115
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.90 E-value=4.2e-09 Score=102.62 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=76.1
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEecc-ccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSEL-LGS 158 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEl-lGs 158 (359)
+|+|+|||+ ++...++.....+|+++|. |.+++.|+++++..++.++|+++.+|+.+.+ .|+.+|+|++-. +..
T Consensus 182 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~ 260 (363)
T 3dp7_A 182 RLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFLDC 260 (363)
T ss_dssp EEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCSTT
T ss_pred EEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEechhhh
Confidence 689999998 5544444444569999999 9999999999988888889999999999874 567899999633 222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+. .+....+|..+.+.|||||.++
T Consensus 261 ~~-~~~~~~~l~~~~~~L~pgG~l~ 284 (363)
T 3dp7_A 261 FS-EEEVISILTRVAQSIGKDSKVY 284 (363)
T ss_dssp SC-HHHHHHHHHHHHHHCCTTCEEE
T ss_pred CC-HHHHHHHHHHHHHhcCCCcEEE
Confidence 22 2234567888999999999864
No 116
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.90 E-value=2.8e-09 Score=96.83 Aligned_cols=95 Identities=19% Similarity=0.179 Sum_probs=70.9
Q ss_pred ccCCcCChhH--H-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc----CCCCccEEEecc
Q 039233 83 DRVPDEEASS--L-TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD----APEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l-~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~----~p~k~DiIVSEl 155 (359)
++|+|+|||+ + ..+|.+.|...+|+|||.|+.|+..+.++.+.+ .+|+++.+|+++.. .++++|+|++..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 3689999997 4 345556554449999999999988888887765 56999999999843 346899999865
Q ss_pred ccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 156 LGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
. ..+....++..+.+.|||||+++=
T Consensus 156 ~----~~~~~~~~~~~~~~~LkpgG~l~i 180 (233)
T 2ipx_A 156 A----QPDQTRIVALNAHTFLRNGGHFVI 180 (233)
T ss_dssp C----CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred C----CccHHHHHHHHHHHHcCCCeEEEE
Confidence 4 122223346778999999998654
No 117
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.90 E-value=1.6e-09 Score=99.38 Aligned_cols=108 Identities=15% Similarity=0.065 Sum_probs=76.7
Q ss_pred HHHHHHHhhc---ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C-
Q 039233 73 YQRAIGNALV---DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A- 144 (359)
Q Consensus 73 Y~~AI~~~~~---d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~- 144 (359)
|.++..+.+. .+|||+|||+ ++...++.+.. +|++||.||.+++.|+++.+.. +.+++++.+|..++. +
T Consensus 49 ~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~--~~~~~~~~~~a~~~~~~~~ 125 (236)
T 3orh_A 49 YMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQ--THKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGC--SSEEEEEESCHHHHGGGSC
T ss_pred HHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhC--CCceEEEeehHHhhccccc
Confidence 3344444442 4799999998 44444444444 8999999999999999987753 467999999988763 2
Q ss_pred CCCccEEEeccccccCCCC---ChHHHHHHHhhccCCCeEEE
Q 039233 145 PEKADILVSELLGSFGDNE---LSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 145 p~k~DiIVSEllGs~~~~E---l~~e~L~~a~r~Lkp~Gi~I 183 (359)
...+|.|+...+-+..... ....++..+.|.|||||+++
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEE
Confidence 3579999876544322112 13457788899999999985
No 118
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.90 E-value=9.4e-09 Score=99.74 Aligned_cols=154 Identities=18% Similarity=0.158 Sum_probs=98.9
Q ss_pred CCCCCCCCc--ee-ecccchhhhcccccCCCCCccccCcHHHHHHHhcCcccHHHHHHHHHHhhc----ccCCcCChhH-
Q 039233 21 PLQGHNPLF--HI-ISDEFCTIEFSNYYLSFQPLMDNLEAQTYETFEKDSVKYIQYQRAIGNALV----DRVPDEEASS- 92 (359)
Q Consensus 21 pl~~~~~~~--~~-~~~~~~~~~~~~~~~~~qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~~~----d~v~D~g~Gt- 92 (359)
.....+|.+ +| +..|.+.+.+.... .+|.. .-|..+-.-+.+ .....++..... +.|+|+|||+
T Consensus 144 ~v~~~~pd~~i~v~i~~d~~~l~~d~sg---~~l~~----r~yr~~~~a~l~-~~la~~l~~~~~~~~~~~vLD~gcGsG 215 (354)
T 3tma_A 144 PVDLKRPAVRVRVDVRGEEAFLGVQLTE---RPLSR----RFPKAALRGSLT-PVLAQALLRLADARPGMRVLDPFTGSG 215 (354)
T ss_dssp CBCSSSCSEEEEEEEETTEEEEEEECCS---SCGGG----CCGGGCSSCSCC-HHHHHHHHHHTTCCTTCCEEESSCTTS
T ss_pred cccCCCCCEEEEEEEECCEEEEEEEccC---Ccccc----cccccCCCCCcC-HHHHHHHHHHhCCCCCCEEEeCCCCcC
Confidence 356678877 44 77888877654332 22222 112221112222 222333333321 3689999987
Q ss_pred -HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEeccc-cccCC-CC----
Q 039233 93 -LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELL-GSFGD-NE---- 163 (359)
Q Consensus 93 -l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEll-Gs~~~-~E---- 163 (359)
++ .+|.++|...+|+|+|.|+.|++.|++|++.+|+. +|+++++|++++..+ ..+|+||++.- |.... .+
T Consensus 216 ~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~ 294 (354)
T 3tma_A 216 TIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFH 294 (354)
T ss_dssp HHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHH
T ss_pred HHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHH
Confidence 44 55555544559999999999999999999998888 799999999998654 45799999642 22111 11
Q ss_pred ChHHHHHHHhhccCCCeEEE
Q 039233 164 LSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 164 l~~e~L~~a~r~Lkp~Gi~I 183 (359)
+..+++..+.+.|||||.++
T Consensus 295 ~~~~~~~~~~~~LkpgG~l~ 314 (354)
T 3tma_A 295 LYWDFLRGALALLPPGGRVA 314 (354)
T ss_dssp HHHHHHHHHHHTSCTTCEEE
T ss_pred HHHHHHHHHHHhcCCCcEEE
Confidence 12457777889999999854
No 119
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.89 E-value=5.3e-09 Score=94.85 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=76.6
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C--CCCccEEEecc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A--PEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~--p~k~DiIVSEl 155 (359)
++|+|+|||+ ++ .+|...+ ..+|++||.|+.+++.|+++++.+++.++|+++.+|+.+.. . ++++|+|++..
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 4799999987 44 4444432 34999999999999999999998888888999999998852 2 46899999743
Q ss_pred ccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 156 LGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
. .+...+.|..+.+.|||||+++=.
T Consensus 135 ~-----~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 135 A-----KGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp G-----GSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred C-----HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 2 124577889999999999997654
No 120
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.89 E-value=2.5e-09 Score=105.57 Aligned_cols=105 Identities=19% Similarity=0.129 Sum_probs=82.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCC-CCeEEEEeCccccccC-----CCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGW-EKTVTIVSCDMRCWDA-----PEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~-~~~V~vi~~d~~~~~~-----p~k~DiIVSE 154 (359)
++|+|+|||+ ++..+++.|++ +|+|||.|+.|++.|++|++.|++ .++++++.+|+.++.. .+++|+||+.
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~-~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCS-QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEeeccCCHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 4799999988 77777777766 999999999999999999999998 7679999999988632 4689999986
Q ss_pred cccc-------cCCCCChHHHHHHHhhccCCCeEEEccccc
Q 039233 155 LLGS-------FGDNELSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 155 llGs-------~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
.--. ....+...+.+..+.+.|||||+++=+.+.
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 4210 111133456788889999999998755443
No 121
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.89 E-value=2.8e-09 Score=99.60 Aligned_cols=95 Identities=22% Similarity=0.159 Sum_probs=75.7
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++..+++. |...+|+++|.|+.+++.|+++++.+++.++++++.+|+.+.-..+++|+|++.+-
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~~--- 190 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVP--- 190 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCS---
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECCc---
Confidence 4799999987 55444444 64459999999999999999999988887789999999998743467999998421
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
...++|..+.+.|||||.++=
T Consensus 191 ----~~~~~l~~~~~~L~pgG~l~~ 211 (277)
T 1o54_A 191 ----DPWNYIDKCWEALKGGGRFAT 211 (277)
T ss_dssp ----CGGGTHHHHHHHEEEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCCEEEE
Confidence 123688899999999998653
No 122
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.89 E-value=3.3e-09 Score=97.36 Aligned_cols=100 Identities=14% Similarity=0.082 Sum_probs=78.1
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cC------CCCccEE
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DA------PEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~------p~k~DiI 151 (359)
.+|+|+|||+ .+ .+|...+...+|++||.|+.+++.|+++++..++.++|+++.+|+.++ .+ ++++|+|
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I 151 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFG 151 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEE
Confidence 4799999987 33 344443323599999999999999999999989988999999999875 22 4689999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEcccc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
++.. ..+..++.+..+.+.|||||+++=+..
T Consensus 152 ~~d~-----~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 152 FVDA-----DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EECS-----CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EECC-----chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9642 123356788899999999999876543
No 123
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.88 E-value=2.5e-09 Score=94.84 Aligned_cols=95 Identities=9% Similarity=0.096 Sum_probs=70.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
.+|+|+|||+ ++...++.| .+|++||.|+.+++.|++ .+. .+|+++++|+.++..++++|+|++-..=...
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTPDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCCSSCEEEEEEESCGGGS
T ss_pred CeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCCCCceeEEEEechhhcC
Confidence 3699999998 554444445 399999999999998887 344 4599999999998666899999973221222
Q ss_pred CCCChHHHHHHHhhccCCCeEEEc
Q 039233 161 DNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.++....+|..+.+.|||||+++=
T Consensus 121 ~~~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 121 PDDRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 222235688888999999999653
No 124
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.88 E-value=4.7e-09 Score=95.70 Aligned_cols=96 Identities=22% Similarity=0.210 Sum_probs=75.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecc-ccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSEL-LGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEl-lGs 158 (359)
.+|||+|||+ ++...++.+ .+|++||.|+.+++.|+++...++.. +|+++.+|++++..+ +.+|+|++.. +..
T Consensus 23 ~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 99 (239)
T 1xxl_A 23 HRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDDSFDIITCRYAAHH 99 (239)
T ss_dssp CEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCCcEEEEEECCchhh
Confidence 3799999998 555555555 29999999999999999999887776 499999999987654 6899999752 222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+. .....|..+.+.|||||.++=
T Consensus 100 ~~---~~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 100 FS---DVRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp CS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred cc---CHHHHHHHHHHHcCCCcEEEE
Confidence 22 256788999999999998653
No 125
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.87 E-value=1e-08 Score=100.06 Aligned_cols=122 Identities=18% Similarity=0.216 Sum_probs=89.5
Q ss_pred HHHHHhcCcccHHHHHHHHHH-----------hhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAIGN-----------ALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHS 121 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~-----------~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~ 121 (359)
.|+.+.+|+.....|.+++.. .+. .+|+|+|||+ ++...++.....+++++|. +.+++.|++
T Consensus 165 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 243 (369)
T 3gwz_A 165 FWQLTHEDPKARELFNRAMGSVSLTEAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARE 243 (369)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHhhhHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHH
Confidence 477777888777777555432 111 2589999998 4444444445569999999 999999999
Q ss_pred HHHhcCCCCeEEEEeCccccccCCCCccEEEec-cccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 122 LVRLEGWEKTVTIVSCDMRCWDAPEKADILVSE-LLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 122 ~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSE-llGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++...++.++|+++.+|+.+ ..|..+|+|++- .+-.+. .+....+|..+.+.|||||.++
T Consensus 244 ~~~~~~l~~~v~~~~~d~~~-~~p~~~D~v~~~~vlh~~~-d~~~~~~L~~~~~~L~pgG~l~ 304 (369)
T 3gwz_A 244 LLTGRGLADRCEILPGDFFE-TIPDGADVYLIKHVLHDWD-DDDVVRILRRIATAMKPDSRLL 304 (369)
T ss_dssp HHHHTTCTTTEEEEECCTTT-CCCSSCSEEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEE
T ss_pred hhhhcCcCCceEEeccCCCC-CCCCCceEEEhhhhhccCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 99988888999999999984 455589999853 333332 2223468899999999999865
No 126
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.87 E-value=1e-08 Score=98.13 Aligned_cols=122 Identities=16% Similarity=0.148 Sum_probs=90.5
Q ss_pred HHHHHhcCcccHHHHHHHHHHh-------h-c-------ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAIGNA-------L-V-------DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHS 121 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~~-------~-~-------d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~ 121 (359)
.|+.+.+|+.....|.+++... + . .+|+|+|||+ ++...++.....+++++|. |.+++.|++
T Consensus 132 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 210 (332)
T 3i53_A 132 FWEDLGSDPVLSASFDTLMSHHLELDYTGIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHR 210 (332)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHhHHhhHHHHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHH
Confidence 4777778888777777766432 1 1 2589999998 4444344334569999999 999999999
Q ss_pred HHHhcCCCCeEEEEeCccccccCCCCccEEEec-cccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 122 LVRLEGWEKTVTIVSCDMRCWDAPEKADILVSE-LLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 122 ~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSE-llGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++...++.++|+++.+|+.+ ..|..+|+|++- .+..+.+ +...++|..+.+.|||||.++
T Consensus 211 ~~~~~~~~~~v~~~~~d~~~-~~p~~~D~v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~ 271 (332)
T 3i53_A 211 RFLDTGLSGRAQVVVGSFFD-PLPAGAGGYVLSAVLHDWDD-LSAVAILRRCAEAAGSGGVVL 271 (332)
T ss_dssp HHHHTTCTTTEEEEECCTTS-CCCCSCSEEEEESCGGGSCH-HHHHHHHHHHHHHHTTTCEEE
T ss_pred hhhhcCcCcCeEEecCCCCC-CCCCCCcEEEEehhhccCCH-HHHHHHHHHHHHhcCCCCEEE
Confidence 99988888999999999984 445589999963 3333332 234668899999999999865
No 127
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.87 E-value=3.1e-10 Score=100.24 Aligned_cols=96 Identities=15% Similarity=0.063 Sum_probs=53.3
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-----CCccEEEeccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-----EKADILVSELL 156 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-----~k~DiIVSEll 156 (359)
+|+|+|||+ ++..+++.+...+|+|||.|+.+++.|++++..++. +++++++|+.+.... +++|+|++..-
T Consensus 33 ~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp 110 (215)
T 4dzr_A 33 RVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLIERAERGRPWHAIVSNPP 110 (215)
T ss_dssp EEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSEEEECCC
T ss_pred EEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhhhhhhccCcccEEEECCC
Confidence 699999987 555555555456999999999999999999988766 799999999984333 78999998421
Q ss_pred -------cccCC--------------CCC---hHHHHHHHhhccCCCeE
Q 039233 157 -------GSFGD--------------NEL---SPECLDGAQRFLKQDGI 181 (359)
Q Consensus 157 -------Gs~~~--------------~El---~~e~L~~a~r~Lkp~Gi 181 (359)
..+.. ... ..+++..+.+.|||||+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 159 (215)
T 4dzr_A 111 YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRA 159 (215)
T ss_dssp CCC------------------------CTTHHHHHHHTCCGGGBCSSSE
T ss_pred CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCe
Confidence 00000 000 14566677899999998
No 128
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.86 E-value=6.8e-10 Score=102.60 Aligned_cols=100 Identities=8% Similarity=-0.027 Sum_probs=77.9
Q ss_pred ccCCcCChhH--HHH-HHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C-----CCCccEEE
Q 039233 83 DRVPDEEASS--LTT-AAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A-----PEKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt--l~~-~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~-----p~k~DiIV 152 (359)
.+|+|+|||+ .+. +|...+...+|++||.++.+++.|+++++.++..++|+++.+|+.++- + .+++|+|+
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~ 141 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIF 141 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEE
Confidence 4799999987 443 344343345999999999999999999999999989999999998852 2 47899999
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEEcccc
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
+..- .+...+.|..+.+.|||||+++=...
T Consensus 142 ~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 142 IDAD-----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EESC-----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EcCC-----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 6421 23355678888999999999875443
No 129
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.86 E-value=5.5e-09 Score=103.20 Aligned_cols=97 Identities=18% Similarity=0.169 Sum_probs=76.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs~ 159 (359)
.+|+|+|||+ ++..+++.| .+|++||.|+.|++.|+++++.++.+ ++++.+|+.+...+ +++|+|||...=..
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g--~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTT--CEEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CEEEEEeeeCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhccccCCCeEEEEECCchhh
Confidence 3799999998 555555555 39999999999999999999988764 89999999997655 79999998643111
Q ss_pred ---CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 ---GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ---~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...+...+++..+.+.|||||+++
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~ 337 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFF 337 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEE
Confidence 122334568888999999999965
No 130
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.86 E-value=2.2e-09 Score=105.96 Aligned_cols=105 Identities=22% Similarity=0.244 Sum_probs=81.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----CCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----PEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----p~k~DiIVSEl 155 (359)
++|+|+|||+ ++..+++.|++ +|+|||.|+.|++.|+++++.|++.++++++++|+.++.. .+++|+||+..
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~-~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp 297 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGAD-EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP 297 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEecCCCCHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC
Confidence 4799999987 77766676766 9999999999999999999999998789999999988632 46899999753
Q ss_pred ccccCCC--------CChHHHHHHHhhccCCCeEEEccccce
Q 039233 156 LGSFGDN--------ELSPECLDGAQRFLKQDGISIPSSYTS 189 (359)
Q Consensus 156 lGs~~~~--------El~~e~L~~a~r~Lkp~Gi~IP~~~t~ 189 (359)
- .+... +...+.+..+.+.|||||+++=.+++.
T Consensus 298 P-~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 298 P-AFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp C-CSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 2 12211 223457778889999999877655543
No 131
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.86 E-value=3e-09 Score=101.83 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=89.0
Q ss_pred HHHHHhcCcccHHHHHHHH------HHhh-c------ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAI------GNAL-V------DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLV 123 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI------~~~~-~------d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~ 123 (359)
.|+.+.+|+.....|.+++ ...+ . .+|+|+|||+ ++...++.....+|+++|. +.+++.|++++
T Consensus 132 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~ 210 (334)
T 2ip2_A 132 FYSYLKRCPDAGRRFLLAMKASNLAFHEIPRLLDFRGRSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNL 210 (334)
T ss_dssp HHHHHHHCHHHHHHHHHHHGGGHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHT
T ss_pred HHHHHhhChHHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHH
Confidence 3667777877777777665 1111 1 2689999998 4443333333459999999 99999999998
Q ss_pred HhcCCCCeEEEEeCccccccCCCCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 124 RLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 124 ~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
...++.++|+++.+|+.+ ..|+.+|+|++-. +..+. .+....+|..+.+.|||||.++=
T Consensus 211 ~~~~~~~~v~~~~~d~~~-~~~~~~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 211 SSLLAGERVSLVGGDMLQ-EVPSNGDIYLLSRIIGDLD-EAASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp HHHHHTTSEEEEESCTTT-CCCSSCSEEEEESCGGGCC-HHHHHHHHHHHHHHSCTTCEEEE
T ss_pred hhcCCCCcEEEecCCCCC-CCCCCCCEEEEchhccCCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence 877788899999999988 5677899999632 22232 22345688999999999998653
No 132
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.85 E-value=1.8e-09 Score=106.62 Aligned_cols=107 Identities=12% Similarity=0.057 Sum_probs=81.1
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC-eEEEEeCccccccC-----CCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEK-TVTIVSCDMRCWDA-----PEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~-~V~vi~~d~~~~~~-----p~k~DiIVSE 154 (359)
++|||+|||| ++..+++.|++ +|+|||.|+.|++.|++|++.|++.+ +++++++|+.++-. .+++|+||+.
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~-~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAM-ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBS-EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEEeeccCHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 4799999987 77777777877 99999999999999999999999986 79999999988521 3589999975
Q ss_pred ccccc---CC-CC---ChHHHHHHHhhccCCCeEEEcccccee
Q 039233 155 LLGSF---GD-NE---LSPECLDGAQRFLKQDGISIPSSYTSF 190 (359)
Q Consensus 155 llGs~---~~-~E---l~~e~L~~a~r~Lkp~Gi~IP~~~t~~ 190 (359)
.--.. +. .+ ...+++..+.+.|+|||+++=+.....
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 32110 11 11 123456677899999999876655443
No 133
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.85 E-value=2.7e-09 Score=100.72 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=75.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc--CC--------CCeEEEEeCcccccc-CCCCcc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE--GW--------EKTVTIVSCDMRCWD-APEKAD 149 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n--~~--------~~~V~vi~~d~~~~~-~p~k~D 149 (359)
.+|||+|||+ ++..+++.+.. +|++||.++.+++.|++++ .. ++ ..+|+++.+|++++- .++++|
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~-~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~fD 154 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDVD-EVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGFD 154 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCCS-EEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCEE
T ss_pred CeEEEEcCCcCHHHHHHHhCCCC-EEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCee
Confidence 3699999987 55555555555 9999999999999999987 32 33 468999999998751 157899
Q ss_pred EEEeccccccCC-CCC-hHHHHHHHhhccCCCeEEEcc
Q 039233 150 ILVSELLGSFGD-NEL-SPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 150 iIVSEllGs~~~-~El-~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+|++......+. ..+ ..+.+..+.+.|||||+++=+
T Consensus 155 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 155 VIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 999876654332 222 477889999999999998755
No 134
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.85 E-value=6.1e-09 Score=101.07 Aligned_cols=97 Identities=21% Similarity=0.205 Sum_probs=74.6
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccccC
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSFG 160 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~~ 160 (359)
+|+|+|||+ ++...++.....+|+++|. +.+++.|++++..+++.++|+++.+|+.+ .+|..+|+|++.. +..+.
T Consensus 185 ~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~D~v~~~~vl~~~~ 262 (374)
T 1qzz_A 185 HVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVTADVVLLSFVLLNWS 262 (374)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCCEEEEEEESCGGGSC
T ss_pred EEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCCCCEEEEeccccCCC
Confidence 689999998 5544444444569999999 99999999999988888889999999987 4566799999633 22232
Q ss_pred CCCChHHHHHHHhhccCCCeEEE
Q 039233 161 DNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.+....+|..+.+.|||||.++
T Consensus 263 -~~~~~~~l~~~~~~L~pgG~l~ 284 (374)
T 1qzz_A 263 -DEDALTILRGCVRALEPGGRLL 284 (374)
T ss_dssp -HHHHHHHHHHHHHHEEEEEEEE
T ss_pred -HHHHHHHHHHHHHhcCCCcEEE
Confidence 2223468888999999999755
No 135
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.85 E-value=9.5e-09 Score=93.38 Aligned_cols=92 Identities=13% Similarity=0.067 Sum_probs=73.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-CCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-APEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++..+++.+ .+|+++|.|+.+++.|+++.+.+++.++++++.+|+.+.. ..+.+|+|++.. +
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~-- 167 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV-R-- 167 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS-S--
T ss_pred CEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC-c--
Confidence 4799999987 444444443 3999999999999999999988888778999999999876 456899999732 1
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...+.|..+.+.|||||.++
T Consensus 168 ----~~~~~l~~~~~~L~~gG~l~ 187 (248)
T 2yvl_A 168 ----EPWHYLEKVHKSLMEGAPVG 187 (248)
T ss_dssp ----CGGGGHHHHHHHBCTTCEEE
T ss_pred ----CHHHHHHHHHHHcCCCCEEE
Confidence 12368888999999999865
No 136
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.85 E-value=4.1e-09 Score=100.52 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=76.2
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEe-cccccc
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVS-ELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVS-EllGs~ 159 (359)
+|+|+|||+ ++ .++.+. ...+|+++|.+ .+++.|++++...++.++|+++.+|+.+...++.+|+|++ ..+..+
T Consensus 168 ~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l~~~ 245 (335)
T 2r3s_A 168 KVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFLHHF 245 (335)
T ss_dssp EEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCGGGS
T ss_pred EEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchhccC
Confidence 689999987 44 444443 34599999999 8999999999888888899999999998777777999997 334443
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.+ +...++|..+.+.|||||.++
T Consensus 246 ~~-~~~~~~l~~~~~~L~pgG~l~ 268 (335)
T 2r3s_A 246 DV-ATCEQLLRKIKTALAVEGKVI 268 (335)
T ss_dssp CH-HHHHHHHHHHHHHEEEEEEEE
T ss_pred CH-HHHHHHHHHHHHhCCCCcEEE
Confidence 22 234578888999999999654
No 137
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.85 E-value=1.9e-09 Score=102.76 Aligned_cols=103 Identities=13% Similarity=0.162 Sum_probs=75.1
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHh--cCC-CCeEEEEeCccccc-c-CCCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRL--EGW-EKTVTIVSCDMRCW-D-APEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~--n~~-~~~V~vi~~d~~~~-~-~p~k~DiIVSE 154 (359)
.+|||+|||+ ++..+++. +.. +|++||+|+.+++.|++++.. +++ ..+|+++.+|++++ . .++++|+||+.
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~-~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVE-KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCS-EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCC-EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 4799999987 55555554 444 999999999999999998754 344 46899999999875 2 35689999987
Q ss_pred cccc-cCCCC--ChHHHHHHHhhccCCCeEEEccc
Q 039233 155 LLGS-FGDNE--LSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 155 llGs-~~~~E--l~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
.... .+..+ ...+.+..+.+.|||||+++=+.
T Consensus 171 ~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 171 STDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp C----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 6443 32111 23678899999999999987654
No 138
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.85 E-value=6.3e-09 Score=95.11 Aligned_cols=93 Identities=20% Similarity=0.141 Sum_probs=73.4
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhc-CCCCeEEEEeCccccccCC-CCccEEEecccc
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLE-GWEKTVTIVSCDMRCWDAP-EKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n-~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllG 157 (359)
++|+|+|||+ ++..+++. |...+|+++|.|+.+++.|+++++.+ + .++|+++++|+.+..++ +++|+|++.+-
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~~~~D~v~~~~~- 175 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEEAAYDGVALDLM- 175 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCTTCEEEEEEESS-
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCCCCcCEEEECCc-
Confidence 4799999987 44444443 54459999999999999999999887 7 56799999999998444 57999997421
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...++|..+.+.|||||.++
T Consensus 176 ------~~~~~l~~~~~~L~~gG~l~ 195 (258)
T 2pwy_A 176 ------EPWKVLEKAALALKPDRFLV 195 (258)
T ss_dssp ------CGGGGHHHHHHHEEEEEEEE
T ss_pred ------CHHHHHHHHHHhCCCCCEEE
Confidence 23468899999999999865
No 139
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.85 E-value=3.9e-09 Score=100.86 Aligned_cols=103 Identities=15% Similarity=0.113 Sum_probs=73.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh---cCCCCeEEEEeCcccccc---CCCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL---EGWEKTVTIVSCDMRCWD---APEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~---n~~~~~V~vi~~d~~~~~---~p~k~DiIVSE 154 (359)
.+|||+|||+ ++..+++.....+|++||.|+.+++.|++++.. ..-..+|+++.+|++++. .++++|+||+.
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d 176 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIID 176 (304)
T ss_dssp CEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEE
T ss_pred CeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEEC
Confidence 3699999987 555555543234999999999999999998632 222467999999999863 35789999997
Q ss_pred cccccCCCC-C-hHHHHHHHhhccCCCeEEEcc
Q 039233 155 LLGSFGDNE-L-SPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 155 llGs~~~~E-l-~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.....+..+ + ..+.+..+.+.|||||+++=+
T Consensus 177 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 177 TTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp CC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 655443222 2 267889999999999998754
No 140
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.84 E-value=1.3e-09 Score=103.17 Aligned_cols=99 Identities=17% Similarity=0.149 Sum_probs=70.5
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCC-------------------------------
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWE------------------------------- 129 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~------------------------------- 129 (359)
+|||+|||+ ++ .+|.+.+.. +|+|||.|+.|+..|+++++..+..
T Consensus 49 ~VLDiGCG~G~~~~~la~~~~~~-~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 127 (292)
T 3g07_A 49 DVLDLGCNVGHLTLSIACKWGPS-RMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFP 127 (292)
T ss_dssp EEEEESCTTCHHHHHHHHHTCCS-EEEEEESCHHHHHHHHHTC-------------------------------------
T ss_pred cEEEeCCCCCHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccccc
Confidence 689999998 43 455555545 9999999999999999987654322
Q ss_pred --------------------------CeEEEEeCcccccc------CCCCccEEEecccc-ccC---CCCChHHHHHHHh
Q 039233 130 --------------------------KTVTIVSCDMRCWD------APEKADILVSELLG-SFG---DNELSPECLDGAQ 173 (359)
Q Consensus 130 --------------------------~~V~vi~~d~~~~~------~p~k~DiIVSEllG-s~~---~~El~~e~L~~a~ 173 (359)
++|+++++|+.+.. ..+.+|+|++-.+- .+- ..+....+|..+.
T Consensus 128 ~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~ 207 (292)
T 3g07_A 128 ASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIY 207 (292)
T ss_dssp --------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHH
Confidence 57999999998654 45789999973221 111 2223556888899
Q ss_pred hccCCCeEEE
Q 039233 174 RFLKQDGISI 183 (359)
Q Consensus 174 r~Lkp~Gi~I 183 (359)
+.|||||++|
T Consensus 208 ~~LkpGG~li 217 (292)
T 3g07_A 208 RHLRPGGILV 217 (292)
T ss_dssp HHEEEEEEEE
T ss_pred HHhCCCcEEE
Confidence 9999999966
No 141
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.84 E-value=8.6e-09 Score=99.59 Aligned_cols=121 Identities=19% Similarity=0.229 Sum_probs=86.1
Q ss_pred HHHHhcCcccHHHHHHHHH-----------Hhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHH
Q 039233 60 YETFEKDSVKYIQYQRAIG-----------NALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSL 122 (359)
Q Consensus 60 Ye~f~~D~vry~~Y~~AI~-----------~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~ 122 (359)
|+.+..++.....|.+++. ..+. .+|+|+|||+ ++...++.+...+++++|. +.+++.|+++
T Consensus 147 ~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~ 225 (360)
T 1tw3_A 147 YEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSY 225 (360)
T ss_dssp HHHHHTCHHHHHHHHHHHTTTTTTTTHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHH
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHhHHHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHH
Confidence 4555556555555655532 2221 3689999998 5544444455679999999 8899999999
Q ss_pred HHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 123 VRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 123 ~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++.+++.++|+++.+|+.+ .+|..+|+|++.. +..+. .+...++|..+.+.|||||.++
T Consensus 226 ~~~~~~~~~v~~~~~d~~~-~~~~~~D~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~ 285 (360)
T 1tw3_A 226 LKDEGLSDRVDVVEGDFFE-PLPRKADAIILSFVLLNWP-DHDAVRILTRCAEALEPGGRIL 285 (360)
T ss_dssp HHHTTCTTTEEEEECCTTS-CCSSCEEEEEEESCGGGSC-HHHHHHHHHHHHHTEEEEEEEE
T ss_pred HHhcCCCCceEEEeCCCCC-CCCCCccEEEEcccccCCC-HHHHHHHHHHHHHhcCCCcEEE
Confidence 9988888889999999987 4566799988632 32332 2223468888999999999765
No 142
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.84 E-value=5e-09 Score=98.34 Aligned_cols=106 Identities=24% Similarity=0.137 Sum_probs=79.2
Q ss_pred ccCCcCChhH--H-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----CCCccEEEec
Q 039233 83 DRVPDEEASS--L-TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----PEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l-~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----p~k~DiIVSE 154 (359)
++|+|+|||+ . ..+|+..+...+|+|+|.|+.++..|+++++.++.. +|+++++|++++.. .+++|+|++.
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 4799999987 3 344544433349999999999999999999988887 59999999998753 5789999986
Q ss_pred cc----cccC------------CCCChHHHHHHHhhccCCCeEEEccccce
Q 039233 155 LL----GSFG------------DNELSPECLDGAQRFLKQDGISIPSSYTS 189 (359)
Q Consensus 155 ll----Gs~~------------~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~ 189 (359)
.- |.+. ..+...++|..+.++|||||+++=+.++.
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 32 2111 01344678999999999999987665543
No 143
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.84 E-value=6.5e-10 Score=103.40 Aligned_cols=101 Identities=16% Similarity=0.184 Sum_probs=71.7
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC----C------------------------CCeEE
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG----W------------------------EKTVT 133 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~----~------------------------~~~V~ 133 (359)
+|||+|||+ ++.+++..|++ +|+|+|.|+.|++.|+++++.+. | ..+|+
T Consensus 58 ~vLDiGCG~G~~~~~~~~~~~~-~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 136 (263)
T 2a14_A 58 TLIDIGSGPTIYQVLAACDSFQ-DITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVK 136 (263)
T ss_dssp EEEESSCTTCCGGGTTGGGTEE-EEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEE
T ss_pred eEEEeCCCccHHHHHHHHhhhc-ceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhh
Confidence 689999998 55555566766 89999999999999999876532 0 12355
Q ss_pred -EEeCccccccC-----CCCccEEEeccc-cccC-CCCChHHHHHHHhhccCCCeEEEcc
Q 039233 134 -IVSCDMRCWDA-----PEKADILVSELL-GSFG-DNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 134 -vi~~d~~~~~~-----p~k~DiIVSEll-Gs~~-~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
++.+|+.+..+ .+++|+|+|-.+ -+.. +-+.....|..+.+.|||||.+|=+
T Consensus 137 ~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 137 RVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp EEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 99999998422 358999998322 2211 1122345778888999999997654
No 144
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.84 E-value=3.4e-09 Score=101.47 Aligned_cols=104 Identities=12% Similarity=0.146 Sum_probs=75.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh--cCC-CCeEEEEeCccccc--cCCCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL--EGW-EKTVTIVSCDMRCW--DAPEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~--n~~-~~~V~vi~~d~~~~--~~p~k~DiIVSEl 155 (359)
.+|||+|||+ ++...++.+...+|++||.|+.+++.|++++.. +++ ..+|+++.+|.+++ ..++++|+||+..
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~ 176 (304)
T 2o07_A 97 RKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDS 176 (304)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEEC
T ss_pred CEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECC
Confidence 3699999987 555555543334999999999999999998764 445 56899999999874 2357899999876
Q ss_pred ccccCCCC--ChHHHHHHHhhccCCCeEEEccc
Q 039233 156 LGSFGDNE--LSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 156 lGs~~~~E--l~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
....+..+ ...+.+..+.+.|||||+++=+.
T Consensus 177 ~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 177 SDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp C-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 54333211 23568888999999999987554
No 145
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.83 E-value=6.3e-09 Score=100.87 Aligned_cols=97 Identities=18% Similarity=0.136 Sum_probs=74.7
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccccC
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSFG 160 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~~ 160 (359)
+|+|+|||+ ++...++.....+|+++|. +.+++.|+++++.+++.++|+++.+|+.+...+. .|+|++-. +..+
T Consensus 193 ~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~D~v~~~~vlh~~- 269 (359)
T 1x19_A 193 KMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE-ADAVLFCRILYSA- 269 (359)
T ss_dssp EEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC-CSEEEEESCGGGS-
T ss_pred EEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC-CCEEEEechhccC-
Confidence 689999998 4444444444569999999 9999999999998888889999999999875554 49999632 2222
Q ss_pred CCCChHHHHHHHhhccCCCeEEE
Q 039233 161 DNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..+...++|..+.+.|||||.++
T Consensus 270 ~d~~~~~~l~~~~~~L~pgG~l~ 292 (359)
T 1x19_A 270 NEQLSTIMCKKAFDAMRSGGRLL 292 (359)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEE
Confidence 22335668899999999999874
No 146
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.83 E-value=2.7e-09 Score=94.93 Aligned_cols=93 Identities=13% Similarity=0.094 Sum_probs=70.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
.+|||+|||+ ++...++.| .+|+|||.|+.++..|+++. +++++.+|+.++..++++|+|++-..-...
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 115 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAG--FDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDAYDAVWAHACLLHV 115 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSCEEEEEECSCGGGS
T ss_pred CcEEEECCCCCHHHHHHHHcC--CeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCcEEEEEecCchhhc
Confidence 3799999998 555555555 49999999999999999876 367889999998877899999973211111
Q ss_pred CCCChHHHHHHHhhccCCCeEEEc
Q 039233 161 DNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
..+....+|..+.+.|||||+++=
T Consensus 116 ~~~~~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 116 PRDELADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 222345688889999999999653
No 147
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.83 E-value=1.9e-09 Score=103.99 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=77.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh--cCC-CCeEEEEeCccccc--cCCCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL--EGW-EKTVTIVSCDMRCW--DAPEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~--n~~-~~~V~vi~~d~~~~--~~p~k~DiIVSEl 155 (359)
.+|+|+|||+ ++..+++.....+|++||.|+.+++.|++++.. +++ ..+|+++.+|.+++ ..++++|+||+..
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~ 197 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDS 197 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEEC
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECC
Confidence 3799999987 555555542223999999999999999998764 334 46799999999885 2457899999876
Q ss_pred ccccCCCC-C-hHHHHHHHhhccCCCeEEEccc
Q 039233 156 LGSFGDNE-L-SPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 156 lGs~~~~E-l-~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
...++..+ + ..+.+..+.+.|||||+++=+.
T Consensus 198 ~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 198 SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 54333211 2 2678899999999999987543
No 148
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.83 E-value=7e-09 Score=93.68 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=75.2
Q ss_pred HHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCc
Q 039233 76 AIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKA 148 (359)
Q Consensus 76 AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~ 148 (359)
+|...+. .+|+|+|||+ ++...++.|.. +|++||.|+.+++.|+++... .+|+++.+|+.++.. ++++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGAS-YVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCC-eEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCc
Confidence 4555543 3699999998 55555556755 999999999999998876542 369999999999765 4689
Q ss_pred cEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 149 DILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 149 DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+|++-. .+..-+....+|..+.+.|||||.++
T Consensus 109 D~v~~~~--~l~~~~~~~~~l~~~~~~L~pgG~l~ 141 (243)
T 3bkw_A 109 DLAYSSL--ALHYVEDVARLFRTVHQALSPGGHFV 141 (243)
T ss_dssp EEEEEES--CGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEec--cccccchHHHHHHHHHHhcCcCcEEE
Confidence 9999732 22211235678899999999999865
No 149
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.82 E-value=1.8e-08 Score=86.46 Aligned_cols=91 Identities=11% Similarity=-0.026 Sum_probs=71.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
++|+|+|||+ ++..+++ +. .+|+|+|.|+.+++.|+++.+.+++ ++++++++|+.+.-..+++|+|++...
T Consensus 37 ~~vLdiG~G~G~~~~~l~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~D~i~~~~~---- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAK-RC-KFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVLDKLEFNKAFIGGT---- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHT-TS-SEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHGGGCCCSEEEECSC----
T ss_pred CEEEEeCCCCCHHHHHHHh-cC-CeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccccccCCCCcEEEECCc----
Confidence 3799999997 5555555 33 4999999999999999999998887 459999999988333358999997443
Q ss_pred CCCChHHHHHHHhhccCCCeEEEc
Q 039233 161 DNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+...+.+..+.+. |||.++=
T Consensus 110 --~~~~~~l~~~~~~--~gG~l~~ 129 (183)
T 2yxd_A 110 --KNIEKIIEILDKK--KINHIVA 129 (183)
T ss_dssp --SCHHHHHHHHHHT--TCCEEEE
T ss_pred --ccHHHHHHHHhhC--CCCEEEE
Confidence 4466788888777 9998653
No 150
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.82 E-value=1.7e-09 Score=99.43 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=71.6
Q ss_pred cCCcCChhH--HHHHHHHc--CCCCeEEEEeCCHHHHHHHHHHHHhc---CCCCe-------------------------
Q 039233 84 RVPDEEASS--LTTAAEET--GRKLKIYAVEKNPNAVVTLHSLVRLE---GWEKT------------------------- 131 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~a--ga~~~V~AVE~n~~a~~~a~~~~~~n---~~~~~------------------------- 131 (359)
+|+|+|||+ ++..+++. ....+|+|||.|+.|++.|++++..+ +..++
T Consensus 54 ~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (250)
T 1o9g_A 54 TLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAARR 133 (250)
T ss_dssp EEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhhh
Confidence 689999998 44443333 12248999999999999999998765 44444
Q ss_pred EE-------------EEeCcccccc------CCCCccEEEecc-ccccCCC------CChHHHHHHHhhccCCCeEEE
Q 039233 132 VT-------------IVSCDMRCWD------APEKADILVSEL-LGSFGDN------ELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 132 V~-------------vi~~d~~~~~------~p~k~DiIVSEl-lGs~~~~------El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+ ++++|+.+.. ...++|+||+.. .+....- +....++..+.+.|||||+++
T Consensus 134 v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 211 (250)
T 1o9g_A 134 LRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIA 211 (250)
T ss_dssp HHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEE
Confidence 77 9999998864 334899999864 2222211 223467788899999999865
No 151
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.82 E-value=2e-08 Score=89.02 Aligned_cols=93 Identities=19% Similarity=0.096 Sum_probs=71.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
++|+|+|||+ ++..+++.|++ +|+|||.|+.+++.|+++.+.++. +++++++|+.++ +.++|+||+..-=...
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~--~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK-EVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEF--NSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGC--CCCCSEEEECCCCSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHc--CCCCCEEEEcCCCccc
Confidence 4789999998 66666666766 899999999999999999988777 699999999986 4689999987531111
Q ss_pred CCCChHHHHHHHhhccCCCeEE
Q 039233 161 DNELSPECLDGAQRFLKQDGIS 182 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~ 182 (359)
......+.|..+.+.| ||+.
T Consensus 126 ~~~~~~~~l~~~~~~l--~~~~ 145 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DVVY 145 (207)
T ss_dssp STTTTHHHHHHHHHHC--SEEE
T ss_pred cCCchHHHHHHHHHhc--CcEE
Confidence 2233456788888877 5543
No 152
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.82 E-value=7.6e-09 Score=100.13 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=79.9
Q ss_pred HHHHHHhh----cccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCC
Q 039233 74 QRAIGNAL----VDRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEK 147 (359)
Q Consensus 74 ~~AI~~~~----~d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k 147 (359)
.+.+...+ .++|+|+|||+ ++..+++.+...+|++||.|+.|++.|+++++.++.. ++++.+|+.+.. +++
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~-~~~ 261 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV-KGR 261 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC-CSC
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc-cCC
Confidence 44555554 24799999998 6666666666569999999999999999999988775 566899998754 678
Q ss_pred ccEEEeccccccC---CCCChHHHHHHHhhccCCCeEEE
Q 039233 148 ADILVSELLGSFG---DNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 148 ~DiIVSEllGs~~---~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+|+||+...=..+ ..+...+.|..+.+.|||||.++
T Consensus 262 fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~ 300 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR 300 (343)
T ss_dssp EEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred eeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEE
Confidence 9999986432111 11224567888899999999865
No 153
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.82 E-value=4.7e-09 Score=95.82 Aligned_cols=99 Identities=13% Similarity=0.140 Sum_probs=76.1
Q ss_pred ccCCcCChhH--HHHH-HHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cC---C--CCccEEE
Q 039233 83 DRVPDEEASS--LTTA-AEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DA---P--EKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~-A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~---p--~k~DiIV 152 (359)
.+|+|+|||+ .+.. |...+...+|++||.|+.++..|+++++.+++.++|+++.+|+.+. .+ . +++|+|+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~ 153 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIF 153 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEE
Confidence 4799999987 4433 3333324599999999999999999999889988999999998763 11 1 6899999
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+..- .+..++.+..+.+.|||||+++=..
T Consensus 154 ~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 154 IDAD-----KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp ECSC-----GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred ECCC-----HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 6432 2335678888999999999987543
No 154
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.82 E-value=5.2e-09 Score=90.69 Aligned_cols=101 Identities=16% Similarity=0.216 Sum_probs=73.1
Q ss_pred HHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCc
Q 039233 74 QRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKA 148 (359)
Q Consensus 74 ~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~ 148 (359)
.+.+...+. .+|+|+|||+ ++...++.| .+|+++|.|+.+++.|+++.. +++++++|+.++..+ +++
T Consensus 37 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~~~ 108 (195)
T 3cgg_A 37 ARLIDAMAPRGAKILDAGCGQGRIGGYLSKQG--HDVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQISETDF 108 (195)
T ss_dssp HHHHHHHSCTTCEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSCCCCCCE
T ss_pred HHHHHHhccCCCeEEEECCCCCHHHHHHHHCC--CcEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCCCCCCce
Confidence 344444443 3799999987 555545555 499999999999999887642 389999999987654 689
Q ss_pred cEEEec--cccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 149 DILVSE--LLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 149 DiIVSE--llGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+|++. .+..+ ..+....+|..+.+.|||||+++
T Consensus 109 D~i~~~~~~~~~~-~~~~~~~~l~~~~~~l~~~G~l~ 144 (195)
T 3cgg_A 109 DLIVSAGNVMGFL-AEDGREPALANIHRALGADGRAV 144 (195)
T ss_dssp EEEEECCCCGGGS-CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEECCcHHhhc-ChHHHHHHHHHHHHHhCCCCEEE
Confidence 999973 22222 22234568888899999999865
No 155
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.81 E-value=1.1e-08 Score=94.45 Aligned_cols=99 Identities=8% Similarity=-0.031 Sum_probs=70.7
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHH------HHHHHHHHHHhcCCCCeEEEEeCc-ccccc--C-CCCcc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPN------AVVTLHSLVRLEGWEKTVTIVSCD-MRCWD--A-PEKAD 149 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~------a~~~a~~~~~~n~~~~~V~vi~~d-~~~~~--~-p~k~D 149 (359)
++|||+|||+ ++ .+|.+.|+..+|++||.|+. ++..|+++++.+++.++|+++.+| .+... . ++++|
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 3799999998 44 44555466459999999997 899999999888887889999998 43333 2 36899
Q ss_pred EEEec-cccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 150 ILVSE-LLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 150 iIVSE-llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+|+|- .+..+.+ ...++....++++|||.++=
T Consensus 125 ~v~~~~~l~~~~~---~~~~~~~~~~l~~~gG~l~~ 157 (275)
T 3bkx_A 125 RVVLAHSLWYFAS---ANALALLFKNMAAVCDHVDV 157 (275)
T ss_dssp EEEEESCGGGSSC---HHHHHHHHHHHTTTCSEEEE
T ss_pred EEEEccchhhCCC---HHHHHHHHHHHhCCCCEEEE
Confidence 99973 2222222 23345556677788998663
No 156
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.81 E-value=1.8e-08 Score=99.66 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=58.1
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccc-cCCCCChHHHHHHHhhccCC
Q 039233 104 LKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGS-FGDNELSPECLDGAQRFLKQ 178 (359)
Q Consensus 104 ~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs-~~~~El~~e~L~~a~r~Lkp 178 (359)
.+|+|+|+|+.|++.|++|++.+|+.++|+++++|+.++..+.++|+||++. .|. +++.+...+.+....+.||+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 4699999999999999999999999999999999999998888999999974 233 22222233344444556665
No 157
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.81 E-value=4.3e-09 Score=96.20 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=72.3
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCccEEEec-cccc
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKADILVSE-LLGS 158 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~DiIVSE-llGs 158 (359)
+|||+|||+ ++ .+|.+.| .+|+|||.|+.+++.|+++.... .+|+++.+|+.++.. .+++|+|++- .+..
T Consensus 58 ~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 58 KVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp EEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCCCcEEEEeHHHHHHh
Confidence 689999998 44 3444434 49999999999999999876543 679999999999865 4789999973 2232
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+. .+...++|..+.+.|||||.++=.
T Consensus 133 ~~-~~~~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 133 LS-LENKNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp SC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cC-hHHHHHHHHHHHHHcCCCCEEEEE
Confidence 21 133466888899999999997643
No 158
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.81 E-value=4.2e-09 Score=101.40 Aligned_cols=104 Identities=14% Similarity=0.159 Sum_probs=73.8
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc--CC-CCeEEEEeCccccc--cCCCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE--GW-EKTVTIVSCDMRCW--DAPEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n--~~-~~~V~vi~~d~~~~--~~p~k~DiIVSEl 155 (359)
.+|||+|||+ ++..+++.....+|++||+|+.+++.|++++... ++ ..+|+++.+|++++ ..++++|+||+..
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~ 189 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDS 189 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECC
T ss_pred CEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcC
Confidence 3699999987 5555544432349999999999999999987542 34 56899999999885 2357899999876
Q ss_pred ccccCCCC-Ch-HHHHHHHhhccCCCeEEEccc
Q 039233 156 LGSFGDNE-LS-PECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 156 lGs~~~~E-l~-~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
....+..+ +. .+.+..+.+.|||||+++=+.
T Consensus 190 ~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 190 SDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp C-------------HHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 55443222 22 678899999999999987554
No 159
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.81 E-value=8.4e-09 Score=95.48 Aligned_cols=102 Identities=24% Similarity=0.292 Sum_probs=77.6
Q ss_pred HHHHHhhc-------ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-
Q 039233 75 RAIGNALV-------DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD- 143 (359)
Q Consensus 75 ~AI~~~~~-------d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~- 143 (359)
.||.+.+. ++|+|+|||+ .+.+|...|...+|||||.++.|++.|+++.++ .+ .|+.|.+|.++..
T Consensus 64 a~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--~~-ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 64 AALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--RR-NIFPILGDARFPEK 140 (233)
T ss_dssp HHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--CT-TEEEEESCTTCGGG
T ss_pred HHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--hc-CeeEEEEeccCccc
Confidence 56665443 4799999987 567777778878999999999999999887654 33 4899999998754
Q ss_pred ---CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 144 ---APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 144 ---~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+.+.+|+|++++. ..+.....+..+.++|||||.++
T Consensus 141 ~~~~~~~vDvVf~d~~----~~~~~~~~l~~~~r~LKpGG~lv 179 (233)
T 4df3_A 141 YRHLVEGVDGLYADVA----QPEQAAIVVRNARFFLRDGGYML 179 (233)
T ss_dssp GTTTCCCEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEE
T ss_pred cccccceEEEEEEecc----CChhHHHHHHHHHHhccCCCEEE
Confidence 3478999987532 22334557888999999999865
No 160
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.81 E-value=1e-08 Score=100.65 Aligned_cols=99 Identities=17% Similarity=0.173 Sum_probs=75.6
Q ss_pred cCCcCChhH--H-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-----C-C-CCeEEEEeCccccc------cCC-C
Q 039233 84 RVPDEEASS--L-TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-----G-W-EKTVTIVSCDMRCW------DAP-E 146 (359)
Q Consensus 84 ~v~D~g~Gt--l-~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-----~-~-~~~V~vi~~d~~~~------~~p-~ 146 (359)
+|||+|||+ + ..+|.+.|...+|++||.|+.+++.|+++++.+ | . ..+|+++.+|++++ ..+ +
T Consensus 86 ~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~ 165 (383)
T 4fsd_A 86 TVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDS 165 (383)
T ss_dssp EEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTT
T ss_pred EEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCC
Confidence 689999998 3 345555555569999999999999999998754 3 2 25799999999987 443 5
Q ss_pred CccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 147 KADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 147 k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
++|+|+|..+-... .....+|..+.+.|||||.++=
T Consensus 166 ~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 166 SVDIVISNCVCNLS--TNKLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEE
T ss_pred CEEEEEEccchhcC--CCHHHHHHHHHHHcCCCCEEEE
Confidence 89999985432222 2256788999999999998764
No 161
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.81 E-value=8.4e-09 Score=96.43 Aligned_cols=93 Identities=9% Similarity=0.066 Sum_probs=72.1
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhc-CCCCeEEEEeCccccccCCCCccEEEeccccc
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLE-GWEKTVTIVSCDMRCWDAPEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n-~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs 158 (359)
++|+|+|||+ ++..+++. +...+|+++|.++.+++.|+++.+.+ +. ++|+++.+|+.+...++++|+|++.+-
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~~fD~Vi~~~~-- 188 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFISDQMYDAVIADIP-- 188 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCCSCCEEEEEECCS--
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCcCCCccEEEEcCc--
Confidence 3699999987 44443333 33349999999999999999999877 64 459999999998544568999998321
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...++|..+.+.|||||+++
T Consensus 189 -----~~~~~l~~~~~~LkpgG~l~ 208 (275)
T 1yb2_A 189 -----DPWNHVQKIASMMKPGSVAT 208 (275)
T ss_dssp -----CGGGSHHHHHHTEEEEEEEE
T ss_pred -----CHHHHHHHHHHHcCCCCEEE
Confidence 23468889999999999865
No 162
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.80 E-value=8.1e-09 Score=99.50 Aligned_cols=98 Identities=14% Similarity=0.103 Sum_probs=77.0
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEecc-ccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSEL-LGS 158 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEl-lGs 158 (359)
+|+|+|||+ ++...++.....+++++|. +.++..|++++...++.++|+++.+|+.+.. +++.+|+|++-. +..
T Consensus 182 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~ 260 (352)
T 3mcz_A 182 TVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHY 260 (352)
T ss_dssp EEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGG
T ss_pred EEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccccc
Confidence 689999998 5444444444569999999 7899999999988888899999999999987 778899999632 322
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+ ..+....+|..+.+.|||||.++
T Consensus 261 ~-~~~~~~~~l~~~~~~L~pgG~l~ 284 (352)
T 3mcz_A 261 F-DAREAREVIGHAAGLVKPGGALL 284 (352)
T ss_dssp S-CHHHHHHHHHHHHHTEEEEEEEE
T ss_pred C-CHHHHHHHHHHHHHHcCCCCEEE
Confidence 3 22234568889999999999865
No 163
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.79 E-value=1.2e-08 Score=96.14 Aligned_cols=96 Identities=13% Similarity=0.155 Sum_probs=68.4
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeC-CHHHHHHHHHHH-----HhcCCC----CeEEEEeCcccc----cc---C
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEK-NPNAVVTLHSLV-----RLEGWE----KTVTIVSCDMRC----WD---A 144 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~-n~~a~~~a~~~~-----~~n~~~----~~V~vi~~d~~~----~~---~ 144 (359)
+|+|+|||+ ++.++++.|++ +|+|+|. |+.|+..|++++ +.++.. ++|+++..|..+ +. .
T Consensus 82 ~vLDlG~G~G~~~~~~a~~~~~-~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 82 TVCELGAGAGLVSIVAFLAGAD-QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp EEEETTCTTSHHHHHHHHTTCS-EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred eEEEecccccHHHHHHHHcCCC-EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 699999998 77777788865 9999999 899999999999 555554 468888666443 21 2
Q ss_pred CCCccEEEeccccccCCCCChHHHHHHHhhccC---C--CeEE
Q 039233 145 PEKADILVSELLGSFGDNELSPECLDGAQRFLK---Q--DGIS 182 (359)
Q Consensus 145 p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lk---p--~Gi~ 182 (359)
.+++|+||+ .+.+-..+....++..+.++|| | ||++
T Consensus 161 ~~~fD~Ii~--~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l 201 (281)
T 3bzb_A 161 LQRFQVVLL--ADLLSFHQAHDALLRSVKMLLALPANDPTAVA 201 (281)
T ss_dssp CSSBSEEEE--ESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEE
T ss_pred CCCCCEEEE--eCcccChHHHHHHHHHHHHHhcccCCCCCCEE
Confidence 478999996 2222223335668888899999 9 9963
No 164
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.79 E-value=7e-09 Score=100.75 Aligned_cols=110 Identities=14% Similarity=0.177 Sum_probs=80.2
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh--cCC-CCeEEEEeCccccc--cC-CCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL--EGW-EKTVTIVSCDMRCW--DA-PEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~--n~~-~~~V~vi~~d~~~~--~~-p~k~DiIVSE 154 (359)
.+|||+|||+ ++...++.....+|++||.|+.+++.|++++.. .++ ..+|+++.+|+.++ .. .+++|+||+.
T Consensus 122 ~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d 201 (334)
T 1xj5_A 122 KKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVD 201 (334)
T ss_dssp CEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEEC
T ss_pred CEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEEC
Confidence 3699999987 555544443234999999999999999998764 245 45799999999886 22 4689999987
Q ss_pred cccccCCCC-C-hHHHHHHHhhccCCCeEEEccccceeee
Q 039233 155 LLGSFGDNE-L-SPECLDGAQRFLKQDGISIPSSYTSFIQ 192 (359)
Q Consensus 155 llGs~~~~E-l-~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~ 192 (359)
.....+..+ + ..+.+..+.+.|||||+++=+....+..
T Consensus 202 ~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~ 241 (334)
T 1xj5_A 202 SSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLH 241 (334)
T ss_dssp CCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTC
T ss_pred CCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc
Confidence 654333212 2 3678899999999999988654444433
No 165
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.79 E-value=4.1e-09 Score=96.81 Aligned_cols=71 Identities=10% Similarity=0.007 Sum_probs=57.2
Q ss_pred cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc---cCC----CCccEEEe
Q 039233 84 RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW---DAP----EKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~---~~p----~k~DiIVS 153 (359)
+|+|+|||+ ++ .+|.+... .+|+|||.|+.|++.|+++++.+++.++|+++++|+.+. .++ +++|+|||
T Consensus 68 ~vLDlG~G~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~ 146 (254)
T 2h00_A 68 RGIDIGTGASCIYPLLGATLNG-WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMC 146 (254)
T ss_dssp EEEEESCTTTTHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEE
T ss_pred EEEEeCCChhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEE
Confidence 689999998 44 34444322 499999999999999999999999998999999998762 233 47999999
Q ss_pred cc
Q 039233 154 EL 155 (359)
Q Consensus 154 El 155 (359)
..
T Consensus 147 np 148 (254)
T 2h00_A 147 NP 148 (254)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 166
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.78 E-value=1.5e-08 Score=91.50 Aligned_cols=103 Identities=17% Similarity=0.112 Sum_probs=75.3
Q ss_pred HHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCc
Q 039233 74 QRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKA 148 (359)
Q Consensus 74 ~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~ 148 (359)
.+.+...+. .+|+|+|||+ ++...++.| .+|+|||.|+.++..|+++. ...+++++.+|+.++.. .+++
T Consensus 44 ~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~f 117 (242)
T 3l8d_A 44 IPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTG--YKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQF 117 (242)
T ss_dssp HHHHHHHSCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCE
T ss_pred HHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCc
Confidence 344444443 3799999998 555555555 38999999999998888763 34569999999999875 4789
Q ss_pred cEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 149 DILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 149 DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
|+|++- +.+..-.....+|..+.+.|||||+++=
T Consensus 118 D~v~~~--~~l~~~~~~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 118 EAIMAI--NSLEWTEEPLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp EEEEEE--SCTTSSSCHHHHHHHHHHHEEEEEEEEE
T ss_pred cEEEEc--ChHhhccCHHHHHHHHHHHhCCCeEEEE
Confidence 999972 3322223345788999999999998653
No 167
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.78 E-value=1.3e-08 Score=99.64 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=74.4
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-ccC--CCCccEEEeccc-c
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-WDA--PEKADILVSELL-G 157 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-~~~--p~k~DiIVSEll-G 157 (359)
+|+|+| |+ ++..+++.|+..+|+|||.++.|++.|+++++.+|+. +|+++++|+.+ +.. .+++|+||+... +
T Consensus 175 ~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~ 252 (373)
T 2qm3_A 175 DIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITDPPET 252 (373)
T ss_dssp EEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEECCCSS
T ss_pred EEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEECCCCc
Confidence 689999 98 7766677776449999999999999999999988887 79999999998 532 358999998642 2
Q ss_pred ccCCCCChHHHHHHHhhccCCCeE
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGI 181 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi 181 (359)
.. . ..++|..+.+.|||||.
T Consensus 253 ~~---~-~~~~l~~~~~~LkpgG~ 272 (373)
T 2qm3_A 253 LE---A-IRAFVGRGIATLKGPRC 272 (373)
T ss_dssp HH---H-HHHHHHHHHHTBCSTTC
T ss_pred hH---H-HHHHHHHHHHHcccCCe
Confidence 11 1 36688889999999993
No 168
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.78 E-value=1.5e-08 Score=96.78 Aligned_cols=99 Identities=7% Similarity=-0.052 Sum_probs=70.3
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC-----eEEEEeCcc------ccc---cCC
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEK-----TVTIVSCDM------RCW---DAP 145 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~-----~V~vi~~d~------~~~---~~p 145 (359)
.+|||+|||+ +..+++ .|.. +|+|||.|+.|++.|+++....+... +++++.+|+ .++ ...
T Consensus 50 ~~VLDlGCG~G~~l~~~~~-~~~~-~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFY-GEIA-LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHH-TTCS-EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHh-cCCC-eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 3699999997 443443 3433 99999999999999999877654332 367888887 332 134
Q ss_pred CCccEEEec-cccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 146 EKADILVSE-LLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 146 ~k~DiIVSE-llGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+++|+|+|- .+.++.+.+....+|..+.+.|||||++|
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i 166 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVL 166 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 689999973 23333344455678999999999999975
No 169
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.78 E-value=3e-08 Score=90.51 Aligned_cols=96 Identities=17% Similarity=0.222 Sum_probs=72.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecc-ccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSEL-LGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEl-lGs 158 (359)
.+|+|+|||+ ++...++.| .+|+|||.|+.++..|+++. . +...+++++.+|+.++..+ +++|+|++-. +..
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 3689999998 444444444 49999999999999999987 2 3345699999999988654 5799999732 222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+. ....+|..+.+.|||||.++=.
T Consensus 117 ~~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VP---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CT---THHHHHHHHHHHEEEEEEEEEE
T ss_pred cC---CHHHHHHHHHHHCCCCcEEEEE
Confidence 22 2567889999999999997633
No 170
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.78 E-value=1.9e-08 Score=93.02 Aligned_cols=93 Identities=22% Similarity=0.213 Sum_probs=67.8
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc----CCCCccEEEecc
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD----APEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~----~p~k~DiIVSEl 155 (359)
++|||+|||+ .+.+|...|.+.+|||||.++.++..+.+..+.. .+|+++.+|++... +.+++|+|+|..
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceEEEEecC
Confidence 3689999987 4566667776669999999999876665555432 34999999998753 346899999864
Q ss_pred ccccCCCCChHHHH-HHHhhccCCCeEEE
Q 039233 156 LGSFGDNELSPECL-DGAQRFLKQDGISI 183 (359)
Q Consensus 156 lGs~~~~El~~e~L-~~a~r~Lkp~Gi~I 183 (359)
-- ....++| ..+.++|||||.++
T Consensus 155 a~-----~~~~~il~~~~~~~LkpGG~lv 178 (232)
T 3id6_C 155 AQ-----PDQTDIAIYNAKFFLKVNGDML 178 (232)
T ss_dssp CC-----TTHHHHHHHHHHHHEEEEEEEE
T ss_pred CC-----hhHHHHHHHHHHHhCCCCeEEE
Confidence 21 2344555 44567999999966
No 171
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.78 E-value=1e-08 Score=98.51 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=70.2
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHh-------cC---CCCeEEEEeCccccc--cCC-C
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRL-------EG---WEKTVTIVSCDMRCW--DAP-E 146 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~-------n~---~~~~V~vi~~d~~~~--~~p-~ 146 (359)
++|+|+|||+ ++..+++. |+..+|+|+|.++.+++.|+++++. |+ +.++|+++.+|+.+. .++ .
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 4799999998 55554554 7655999999999999999999875 22 236799999999986 333 4
Q ss_pred CccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 147 KADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 147 k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++|+|++.... ...++..+.+.|||||.++
T Consensus 187 ~fD~V~~~~~~-------~~~~l~~~~~~LkpgG~lv 216 (336)
T 2b25_A 187 TFDAVALDMLN-------PHVTLPVFYPHLKHGGVCA 216 (336)
T ss_dssp -EEEEEECSSS-------TTTTHHHHGGGEEEEEEEE
T ss_pred CeeEEEECCCC-------HHHHHHHHHHhcCCCcEEE
Confidence 79999984321 1236788899999999977
No 172
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.78 E-value=1.4e-08 Score=97.52 Aligned_cols=105 Identities=19% Similarity=0.168 Sum_probs=78.5
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCccEEEecc---
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKADILVSEL--- 155 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~DiIVSEl--- 155 (359)
++|+|+|||+ ...+|.+.+.+.+|+|+|.|+.++..|+++++.++..+ |+++++|++++.. ++++|+|++..
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~-v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLN-VILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCS-EEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCe-EEEEECChhhcccccccCCEEEEeCCCC
Confidence 4799999987 34455555444599999999999999999999888875 9999999998753 56899999863
Q ss_pred -ccccCCCC----------------ChHHHHHHHhhccCCCeEEEccccc
Q 039233 156 -LGSFGDNE----------------LSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 156 -lGs~~~~E----------------l~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
+|.+..+. +..++|..+.+.|||||+++=+.++
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 23222111 0136888899999999998755443
No 173
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=8.2e-09 Score=93.91 Aligned_cols=95 Identities=7% Similarity=-0.112 Sum_probs=72.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCC------CccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPE------KADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~------k~DiIVSE 154 (359)
.+|||+|||+ ++...++.+. +|+|||.|+.+++.|+++.. ..+|+++++|+.++..+. .+|+|++.
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEEEEc
Confidence 3699999998 5555555553 89999999999999998752 236999999999875432 48999986
Q ss_pred cccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 155 LLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 155 llGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.+-.....+....+|..+.+.|||||.++
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 160 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGAMY 160 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 55444444455678899999999999854
No 174
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.76 E-value=1.4e-08 Score=94.44 Aligned_cols=94 Identities=22% Similarity=0.217 Sum_probs=73.6
Q ss_pred ccCCcCChhH--HHH-HHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-C-CCCeEEEEeCccccccC-CCCccEEEeccc
Q 039233 83 DRVPDEEASS--LTT-AAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-G-WEKTVTIVSCDMRCWDA-PEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~~-~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-~-~~~~V~vi~~d~~~~~~-p~k~DiIVSEll 156 (359)
++|+|+|||+ ++. +|.+.|...+|+++|.|+.+++.|+++++.+ + +.++|+++++|+.+... ++.+|+|++...
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 180 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDML 180 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEESS
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECCc
Confidence 4799999987 444 4444454459999999999999999999876 4 55679999999998754 467999998322
Q ss_pred cccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 157 GSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 157 Gs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
...++|..+.+.|||||.++
T Consensus 181 -------~~~~~l~~~~~~L~pgG~l~ 200 (280)
T 1i9g_A 181 -------APWEVLDAVSRLLVAGGVLM 200 (280)
T ss_dssp -------CGGGGHHHHHHHEEEEEEEE
T ss_pred -------CHHHHHHHHHHhCCCCCEEE
Confidence 13368999999999999854
No 175
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.76 E-value=1.3e-08 Score=102.17 Aligned_cols=98 Identities=16% Similarity=0.045 Sum_probs=71.5
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHH-------HHHHHhcCCC-CeEEEEeCccc-c---c-cCCC
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTL-------HSLVRLEGWE-KTVTIVSCDMR-C---W-DAPE 146 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a-------~~~~~~n~~~-~~V~vi~~d~~-~---~-~~p~ 146 (359)
++|+|+|||+ ++ .+|.+.|+. +|+|||.++.+++.| +++++..|+. ++|+++++|.. + + ....
T Consensus 244 ~~VLDLGCGsG~la~~LA~~~g~~-~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~ 322 (433)
T 1u2z_A 244 DTFMDLGSGVGNCVVQAALECGCA-LSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIP 322 (433)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCS-EEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGG
T ss_pred CEEEEeCCCcCHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccC
Confidence 4799999998 44 455556765 999999999999999 8888877754 66999998543 2 1 1236
Q ss_pred CccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 147 KADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 147 k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
++|+|++.. .+-.+..++.|..+.+.|||||+++=
T Consensus 323 ~FDvIvvn~---~l~~~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 323 QCDVILVNN---FLFDEDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp GCSEEEECC---TTCCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCCEEEEeC---ccccccHHHHHHHHHHhCCCCeEEEE
Confidence 899999631 11123356678888899999998653
No 176
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.76 E-value=9.7e-09 Score=92.92 Aligned_cols=96 Identities=9% Similarity=0.057 Sum_probs=72.0
Q ss_pred HHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-ccC--
Q 039233 72 QYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-WDA-- 144 (359)
Q Consensus 72 ~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-~~~-- 144 (359)
.++.++...+. ++|||+|||+ ++...++.| .+|+|||.|+.+++.|+++ ..+++++++|+.+ +..
T Consensus 37 l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~ 108 (226)
T 3m33_A 37 TFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGL 108 (226)
T ss_dssp HHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTC
T ss_pred HHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcC
Confidence 34444544443 4799999998 555555555 4999999999999999887 2359999999954 443
Q ss_pred CCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 145 PEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 145 p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++++|+|+|. .....+|..+.+.|||||+++
T Consensus 109 ~~~fD~v~~~--------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 109 GAPFGLIVSR--------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCCEEEEEEE--------SCCSGGGGGHHHHEEEEEEEE
T ss_pred CCCEEEEEeC--------CCHHHHHHHHHHHcCCCcEEE
Confidence 4689999985 124457888899999999999
No 177
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.76 E-value=7.4e-09 Score=92.04 Aligned_cols=90 Identities=14% Similarity=0.024 Sum_probs=67.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++...++.+ .+|+|||.|+.+++.|+++.+.+++. +|+++++|+.+... ..++|+|++.. .+
T Consensus 79 ~~vLdiG~G~G~~~~~la~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~i~~~~--~~ 153 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHLV--QHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQARAPFDAIIVTA--AP 153 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEESS--BC
T ss_pred CEEEEEcCCCCHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccCCCccEEEEcc--ch
Confidence 4799999998 444333443 39999999999999999999988887 49999999988533 46899999732 11
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.. +.+.+.+.|||||+++
T Consensus 154 --~~----~~~~~~~~L~pgG~lv 171 (210)
T 3lbf_A 154 --PE----IPTALMTQLDEGGILV 171 (210)
T ss_dssp --SS----CCTHHHHTEEEEEEEE
T ss_pred --hh----hhHHHHHhcccCcEEE
Confidence 11 1235678999999854
No 178
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.76 E-value=3e-08 Score=93.27 Aligned_cols=100 Identities=8% Similarity=0.104 Sum_probs=75.0
Q ss_pred ccCCcCChhH-----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----------CC-
Q 039233 83 DRVPDEEASS-----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----------AP- 145 (359)
Q Consensus 83 d~v~D~g~Gt-----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----------~p- 145 (359)
.+|||+|||+ +...+++.....+|++||.||.|++.|++++.. .++++++.+|+++.. ++
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 3689999997 555555544446999999999999999998753 356999999998742 11
Q ss_pred CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 146 EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 146 ~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.++|+|++..+=.+...+....+|..+.+.|||||.++=.
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEE
Confidence 4789999865433444445667899999999999997643
No 179
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.75 E-value=1.2e-08 Score=97.91 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=77.3
Q ss_pred ccCCcCChhH--HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHh--cC-C-CCeEEEEeCccccc--cCCCCccEEEe
Q 039233 83 DRVPDEEASS--LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRL--EG-W-EKTVTIVSCDMRCW--DAPEKADILVS 153 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~--n~-~-~~~V~vi~~d~~~~--~~p~k~DiIVS 153 (359)
.+|||+|||+ ++..+++. +.. +|++||.|+.+++.|++++.. .+ + ..+|+++.+|++++ ..++++|+||+
T Consensus 79 ~~VLdiG~G~G~~~~~l~~~~~~~-~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 79 KRVLIVGGGEGATLREVLKHPTVE-KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CEEEEEECTTSHHHHHHTTSTTCC-EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CeEEEEcCCcCHHHHHHHhcCCCC-EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 3799999987 55554444 334 999999999999999998753 22 3 46899999999985 24678999998
Q ss_pred cccccc---CC-CCC-hHHHHHHHhhccCCCeEEEcccc
Q 039233 154 ELLGSF---GD-NEL-SPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 154 EllGs~---~~-~El-~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
...... +. ..+ ..+.+..+.+.|||||+++=+..
T Consensus 158 d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 158 DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 765443 21 111 46788999999999999876543
No 180
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.75 E-value=1.1e-08 Score=92.18 Aligned_cols=94 Identities=22% Similarity=0.114 Sum_probs=70.7
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCC----CCeEEEEeCccccccC-CCCccEEEec
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGW----EKTVTIVSCDMRCWDA-PEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~----~~~V~vi~~d~~~~~~-p~k~DiIVSE 154 (359)
++|+|+|||+ ++ .+|...|...+|+|+|.++.+++.|+++...++. .++|+++.+|+.+... ..++|+|++.
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~ 158 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVG 158 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEEC
Confidence 4799999987 33 4555556555999999999999999999987665 4569999999986533 4579999863
Q ss_pred cccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 155 LLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 155 llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.. ..+++..+.+.|||||+++=
T Consensus 159 ~~--------~~~~~~~~~~~LkpgG~lv~ 180 (226)
T 1i1n_A 159 AA--------APVVPQALIDQLKPGGRLIL 180 (226)
T ss_dssp SB--------BSSCCHHHHHTEEEEEEEEE
T ss_pred Cc--------hHHHHHHHHHhcCCCcEEEE
Confidence 21 12345677899999998653
No 181
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.75 E-value=1e-08 Score=96.96 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=77.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC--C-CCeEEEEeCcccccc--CCCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG--W-EKTVTIVSCDMRCWD--APEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~--~-~~~V~vi~~d~~~~~--~p~k~DiIVSEl 155 (359)
.+|||+|||+ ++..+++.....+|++||.++.+++.|++++...+ + ..+++++.+|++++- .++++|+||+..
T Consensus 80 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~ 159 (283)
T 2i7c_A 80 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDS 159 (283)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEEC
T ss_pred CeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcC
Confidence 3699999987 55555555333499999999999999999875421 2 467999999998852 367899999876
Q ss_pred ccccCCCC-C-hHHHHHHHhhccCCCeEEEccc
Q 039233 156 LGSFGDNE-L-SPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 156 lGs~~~~E-l-~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
....+..+ + ..+.+..+.+.|||||+++=+.
T Consensus 160 ~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 160 SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 55443322 2 2678999999999999987543
No 182
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.75 E-value=6.6e-09 Score=102.16 Aligned_cols=103 Identities=19% Similarity=0.212 Sum_probs=78.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----CCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----PEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----p~k~DiIVSEl 155 (359)
++|+|+|||+ ++..+++. ++ +|+|||.|+.|++.|+++++.|+..+ ++++++|+.++.. .+++|+||+..
T Consensus 211 ~~VLDlg~G~G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG-FR-EVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH-EE-EEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeeeccCHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 3799999987 55555544 34 99999999999999999999999988 9999999998632 56899999754
Q ss_pred ccccCCC--------CChHHHHHHHhhccCCCeEEEccccce
Q 039233 156 LGSFGDN--------ELSPECLDGAQRFLKQDGISIPSSYTS 189 (359)
Q Consensus 156 lGs~~~~--------El~~e~L~~a~r~Lkp~Gi~IP~~~t~ 189 (359)
- .++.. +...+++..+.+.|||||+++=+.+..
T Consensus 288 P-~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 288 P-AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp C-CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred C-CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 2 12211 123456777889999999987665543
No 183
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.74 E-value=2.9e-08 Score=91.13 Aligned_cols=101 Identities=9% Similarity=0.028 Sum_probs=73.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc--------CCCCeEEEEeCcccc-cc--C-CCCc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE--------GWEKTVTIVSCDMRC-WD--A-PEKA 148 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n--------~~~~~V~vi~~d~~~-~~--~-p~k~ 148 (359)
.+|||+|||+ ++..+++.++..+|+|||.|+.++..|+++++.+ ++.+ |+++.+|+.+ +. . ...+
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~n-v~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQN-INVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTT-EEEEECCTTSCGGGTSCTTCE
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCc-EEEEeccHHHHHHHhcccccc
Confidence 3689999998 5555556555569999999999999999998876 6654 9999999987 33 2 3568
Q ss_pred cEEEeccccccC------CCCChHHHHHHHhhccCCCeEEEc
Q 039233 149 DILVSELLGSFG------DNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 149 DiIVSEllGs~~------~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
|.|+.-.-+..- .....+++|..+.+.|||||+++=
T Consensus 130 d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 130 SKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp EEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred CEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 888743222211 111125788999999999998543
No 184
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.74 E-value=1.6e-08 Score=96.65 Aligned_cols=94 Identities=19% Similarity=0.064 Sum_probs=70.0
Q ss_pred ccCCcCChhH--HHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-CCCCccEEEeccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGR-KLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-APEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga-~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-~p~k~DiIVSEllGs 158 (359)
++|||+|||+ ++..+++.+. ..+|++||.|+.+++.|+++++.+++.+ |+++.+|.++.. ...++|+|++-.+-.
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVPEFSPYDVIFVTVGVD 155 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCGGGCCEEEEEECSBBS
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccccCCCeEEEEEcCCHH
Confidence 4799999997 5444444333 3579999999999999999999888877 999999999843 346899999732211
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
. .+ ..+.+.|||||+++=+
T Consensus 156 ----~-~~---~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 156 ----E-VP---ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp ----C-CC---HHHHHHEEEEEEEEEE
T ss_pred ----H-HH---HHHHHhcCCCcEEEEE
Confidence 1 11 4567899999996543
No 185
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.74 E-value=1.4e-08 Score=92.72 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=69.2
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-cccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~ 159 (359)
.+|+|+|||+ ++...++.....+|+++|.|+.+++.|+++ ..+++++.+|+.++..+.++|+|++.. +..+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWKPAQKADLLYANAVFQWV 108 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCCCSSCEEEEEEESCGGGS
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcCccCCcCEEEEeCchhhC
Confidence 3789999998 444333331224999999999999998876 235899999999987567899999843 2222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.....+|..+.+.|||||.++=
T Consensus 109 ---~~~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 109 ---PDHLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp ---TTHHHHHHHHGGGEEEEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCeEEEE
Confidence 2356788999999999998653
No 186
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.73 E-value=1.6e-08 Score=100.32 Aligned_cols=109 Identities=17% Similarity=0.096 Sum_probs=80.3
Q ss_pred HHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCc
Q 039233 75 RAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKA 148 (359)
Q Consensus 75 ~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~ 148 (359)
+.+...++ ++|||+|||| ++..|++.|+ +|+|||.|+.|++.|++|++.|+..++ ++++|+.++- .+.++
T Consensus 206 ~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~~~~--~~~~D~~~~l~~~~~~f 281 (393)
T 4dmg_A 206 RLFEAMVRPGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGLRVD--IRHGEALPTLRGLEGPF 281 (393)
T ss_dssp HHHHTTCCTTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCCCE--EEESCHHHHHHTCCCCE
T ss_pred HHHHHHhcCCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCCCCc--EEEccHHHHHHHhcCCC
Confidence 44444444 3799999988 7777777775 499999999999999999999999865 4499998862 34459
Q ss_pred cEEEeccccccCCCC--------ChHHHHHHHhhccCCCeEEEccccc
Q 039233 149 DILVSELLGSFGDNE--------LSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 149 DiIVSEllGs~~~~E--------l~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
|+||+..- +|.... ...+++..+.+.|||||+++=.+++
T Consensus 282 D~Ii~dpP-~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 282 HHVLLDPP-TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp EEEEECCC-CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CEEEECCC-cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 99998632 222111 1245777888999999998844443
No 187
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.73 E-value=1.2e-08 Score=93.74 Aligned_cols=94 Identities=7% Similarity=0.026 Sum_probs=69.0
Q ss_pred ccCCcCChhH--HH-HHHHH---cCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc---c-CCC-CccEE
Q 039233 83 DRVPDEEASS--LT-TAAEE---TGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW---D-APE-KADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~---aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~---~-~p~-k~DiI 151 (359)
++|+|+|||+ ++ .+|.. .+...+|+|||.++.+++.|+ +..++|+++++|+.+. . +.+ ++|+|
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 5799999998 33 44444 244459999999999988776 2346799999999985 3 233 69999
Q ss_pred EeccccccCCCCChHHHHHHHhh-ccCCCeEEEcccc
Q 039233 152 VSELLGSFGDNELSPECLDGAQR-FLKQDGISIPSSY 187 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r-~Lkp~Gi~IP~~~ 187 (359)
++... ....++.|..+.+ .|||||+++=...
T Consensus 157 ~~d~~-----~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 157 FIDNA-----HANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEESS-----CSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EECCc-----hHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 97432 2346778888887 9999999876544
No 188
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.73 E-value=5.4e-09 Score=97.76 Aligned_cols=89 Identities=11% Similarity=0.023 Sum_probs=66.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs~ 159 (359)
++|||+|||+ ++...++.| .+|+|||.|+.|++.|++ ..+|+++++|++++.++ ..+|+|++-..-..
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~ 111 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHW 111 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCCCCSSCEEEEEECSCCTT
T ss_pred CCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhcccCCcccEEEEeeehhH
Confidence 4699999998 554444555 389999999999876643 23599999999998765 57999997321122
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
. ..+..+..+.|.|||||+++
T Consensus 112 ~---~~~~~~~e~~rvLkpgG~l~ 132 (257)
T 4hg2_A 112 F---DLDRFWAELRRVARPGAVFA 132 (257)
T ss_dssp C---CHHHHHHHHHHHEEEEEEEE
T ss_pred h---hHHHHHHHHHHHcCCCCEEE
Confidence 2 24568888999999999975
No 189
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.72 E-value=1.5e-08 Score=90.41 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=68.3
Q ss_pred ccCCcCChhH--H-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCccEEEeccccc
Q 039233 83 DRVPDEEASS--L-TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l-~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~DiIVSEllGs 158 (359)
++|+|+|||+ + ..+|...|...+|+++|.|+.+++.|+++...++..+ |+++.+|+.+... ..++|+|++...
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~v~~~~~-- 155 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVGDGTLGYEPLAPYDRIYTTAA-- 155 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEESCGGGCCGGGCCEEEEEESSB--
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEECCcccCCCCCCCeeEEEECCc--
Confidence 4799999997 3 3445555454599999999999999999998877766 9999999865322 467999996321
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+ .. +.+.+.+.|||||+++
T Consensus 156 ~--~~----~~~~~~~~L~pgG~lv 174 (215)
T 2yxe_A 156 G--PK----IPEPLIRQLKDGGKLL 174 (215)
T ss_dssp B--SS----CCHHHHHTEEEEEEEE
T ss_pred h--HH----HHHHHHHHcCCCcEEE
Confidence 1 11 2246678999999854
No 190
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.72 E-value=1.9e-09 Score=98.64 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=72.2
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCC----------------------------CCeE-
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGW----------------------------EKTV- 132 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~----------------------------~~~V- 132 (359)
+|||+|||+ ++...++.|.. +|+|+|.|+.|++.|++++..++- .++|
T Consensus 59 ~vLDlGcG~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~ 137 (265)
T 2i62_A 59 LLIDIGSGPTIYQLLSACESFT-EIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIK 137 (265)
T ss_dssp EEEEESCTTCCGGGTTGGGTEE-EEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEE
T ss_pred EEEEECCCccHHHHHHhhcccC-eEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhhe
Confidence 689999998 55554556653 999999999999999998765321 1238
Q ss_pred EEEeCccccccC--C---CCccEEEecc-ccccC-CCCChHHHHHHHhhccCCCeEEEcc
Q 039233 133 TIVSCDMRCWDA--P---EKADILVSEL-LGSFG-DNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 133 ~vi~~d~~~~~~--p---~k~DiIVSEl-lGs~~-~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+++.+|+.+..+ + +++|+|++-. +.++. ..+....+|..+.+.|||||.+|=.
T Consensus 138 ~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 197 (265)
T 2i62_A 138 QVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMV 197 (265)
T ss_dssp EEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Confidence 999999998653 3 6899999732 11111 1113456788889999999986543
No 191
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.71 E-value=9.1e-09 Score=92.68 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=69.2
Q ss_pred ccCCcCChhH--HH-HHHHHcC----CCCeEEEEeCCHHHHHHHHHHHHhcCC----CCeEEEEeCcccccc-----CCC
Q 039233 83 DRVPDEEASS--LT-TAAEETG----RKLKIYAVEKNPNAVVTLHSLVRLEGW----EKTVTIVSCDMRCWD-----APE 146 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~ag----a~~~V~AVE~n~~a~~~a~~~~~~n~~----~~~V~vi~~d~~~~~-----~p~ 146 (359)
++|+|+|||+ ++ .+|...+ ...+|++||.++.+++.|+++.+.+++ .++|+++.+|+.+.. ...
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 4799999997 44 4444444 345999999999999999999988763 456999999998842 236
Q ss_pred CccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 147 KADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 147 k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++|+|++... + ++++..+.+.|||||+++
T Consensus 162 ~fD~I~~~~~--~------~~~~~~~~~~LkpgG~lv 190 (227)
T 2pbf_A 162 LFDAIHVGAS--A------SELPEILVDLLAENGKLI 190 (227)
T ss_dssp CEEEEEECSB--B------SSCCHHHHHHEEEEEEEE
T ss_pred CcCEEEECCc--h------HHHHHHHHHhcCCCcEEE
Confidence 7999986321 1 124567788999999854
No 192
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.71 E-value=2.5e-08 Score=98.41 Aligned_cols=94 Identities=22% Similarity=0.154 Sum_probs=75.2
Q ss_pred ccCCcCChhH--HHHH-HHHcCCCCeEEEEeCCHHHHHHHHHHHHhc---------------CCCCeEEEEeCcccccc-
Q 039233 83 DRVPDEEASS--LTTA-AEETGRKLKIYAVEKNPNAVVTLHSLVRLE---------------GWEKTVTIVSCDMRCWD- 143 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~-A~~aga~~~V~AVE~n~~a~~~a~~~~~~n---------------~~~~~V~vi~~d~~~~~- 143 (359)
.+|+|+|||+ ++.. |.+.|+. +|+|+|+|+.|++.|++|++.| ++.+ |+++++|+.++.
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~~~-~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~~ 126 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETPAE-EVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRLMA 126 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSSCS-EEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHHHH
T ss_pred CEEEECCCchhHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHHHH
Confidence 4799999987 5544 4444655 8999999999999999999999 7766 999999998863
Q ss_pred -CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 144 -APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 144 -~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
..+++|+|+....|+ ..+.|+.+.+.||+||+++=
T Consensus 127 ~~~~~fD~I~lDP~~~------~~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGS------PMEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp HSTTCEEEEEECCSSC------CHHHHHHHHHHEEEEEEEEE
T ss_pred hccCCCCEEEeCCCCC------HHHHHHHHHHhcCCCCEEEE
Confidence 346899999654432 25689999999999998654
No 193
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.70 E-value=6.1e-08 Score=91.10 Aligned_cols=120 Identities=13% Similarity=0.103 Sum_probs=78.6
Q ss_pred HHHHhcCcccHHHHHHHHHHhhc------------ccCCcCChhH--HH-----HHHHHcCCCCeE--EEEeCCHHHHHH
Q 039233 60 YETFEKDSVKYIQYQRAIGNALV------------DRVPDEEASS--LT-----TAAEETGRKLKI--YAVEKNPNAVVT 118 (359)
Q Consensus 60 Ye~f~~D~vry~~Y~~AI~~~~~------------d~v~D~g~Gt--l~-----~~A~~aga~~~V--~AVE~n~~a~~~ 118 (359)
|+.|.+-..+...+.+.+.+.+. .+|||+|||+ ++ .++.+. ..++| +|||.|+.|++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~ 97 (292)
T 2aot_A 19 FRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAK 97 (292)
T ss_dssp HHHHHTTBSHHHHHHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHH
Confidence 66666655555555444443221 2699999997 32 223332 33454 999999999999
Q ss_pred HHHHHHhc-CCCC-eEEEEeCcccccc-------CCCCccEEEec-cccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 119 LHSLVRLE-GWEK-TVTIVSCDMRCWD-------APEKADILVSE-LLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 119 a~~~~~~n-~~~~-~V~vi~~d~~~~~-------~p~k~DiIVSE-llGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+++++.. +..+ ++.+..++..++. .++++|+|++- .+..+. .....|..+.+.|||||.++
T Consensus 98 a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~ 169 (292)
T 2aot_A 98 YKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK---DIPATLKFFHSLLGTNAKML 169 (292)
T ss_dssp HHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecC---CHHHHHHHHHHHcCCCcEEE
Confidence 99998653 3433 3456677776653 24689999963 333332 24668999999999999865
No 194
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.70 E-value=3e-08 Score=94.00 Aligned_cols=100 Identities=13% Similarity=-0.052 Sum_probs=72.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC------CCCeEEEEeCcccccc----C---CCC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG------WEKTVTIVSCDMRCWD----A---PEK 147 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~------~~~~V~vi~~d~~~~~----~---p~k 147 (359)
.+|||+|||+ ++...++.+.. +|+++|.|+.+++.|+++....+ ...+++++.+|+++.. + +.+
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKGRIN-KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CEEEEECCCCcHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 3699999998 44433334434 99999999999999999886532 2347999999999875 3 248
Q ss_pred ccEEEecc-cccc-CCCCChHHHHHHHhhccCCCeEEE
Q 039233 148 ADILVSEL-LGSF-GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 148 ~DiIVSEl-lGs~-~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+|+|+|-. +..+ .+.+....+|..+.+.|||||.++
T Consensus 115 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (313)
T 3bgv_A 115 FDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFI 152 (313)
T ss_dssp EEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEE
Confidence 99999743 2222 222234568888999999999976
No 195
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.70 E-value=1.7e-08 Score=93.99 Aligned_cols=90 Identities=13% Similarity=0.179 Sum_probs=69.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-cccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~ 159 (359)
.+|||+|||+ ++...++.| .+|+|+|.|+.++..|+++. .+++++.+|+.++..++++|+|++-. +..+
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLDAVFSNAMLHWV 130 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEEEEEEESCGGGC
T ss_pred CEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcCEEEEcchhhhC
Confidence 3799999998 544444443 49999999999999988763 35889999999988778999999732 2222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
. .....|..+.+.|||||.++
T Consensus 131 ~---d~~~~l~~~~~~LkpgG~l~ 151 (279)
T 3ccf_A 131 K---EPEAAIASIHQALKSGGRFV 151 (279)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEE
T ss_pred c---CHHHHHHHHHHhcCCCcEEE
Confidence 2 24568889999999999865
No 196
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.70 E-value=2.9e-08 Score=91.59 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=67.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEec-cccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSE-LLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSE-llGs 158 (359)
.+|||+|||+ ++...++.| .+|+|||.|+.+++.|+++.. .. ++.+|+.++..+ +++|+|++- .+-.
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~~ 126 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERG--FEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSGAFEAVLALGDVLS 126 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred CeEEEeCCCcCHHHHHHHHcC--CeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCCCEEEEEEcchhhh
Confidence 3699999998 555555555 489999999999999988743 11 889999988754 579999972 1222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+..+ ..++|..+.+.|||||+++
T Consensus 127 ~~~~--~~~~l~~~~~~LkpgG~l~ 149 (260)
T 2avn_A 127 YVEN--KDKAFSEIRRVLVPDGLLI 149 (260)
T ss_dssp HCSC--HHHHHHHHHHHEEEEEEEE
T ss_pred cccc--HHHHHHHHHHHcCCCeEEE
Confidence 2222 5678899999999999876
No 197
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.70 E-value=7e-08 Score=94.67 Aligned_cols=94 Identities=15% Similarity=0.164 Sum_probs=71.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEeccc-cc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELL-GS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEll-Gs 158 (359)
++|+|+|||+ ++..+++.+...+|+|+|.|+.|++.|+++++.+|+.++|+++++|++++..+ +++|+||++.- |.
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~ 298 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGL 298 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC-
T ss_pred CEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCc
Confidence 3689999987 66666666654589999999999999999999999988899999999998764 68999999642 32
Q ss_pred -cCCCCCh----HHHHHHHhhcc
Q 039233 159 -FGDNELS----PECLDGAQRFL 176 (359)
Q Consensus 159 -~~~~El~----~e~L~~a~r~L 176 (359)
.+..+.. .+++..+.+.|
T Consensus 299 r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 299 KIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp -----CCHHHHHHHHHHHHHHHE
T ss_pred ccCcchhHHHHHHHHHHHHHHHc
Confidence 2222222 44566667777
No 198
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.69 E-value=2.3e-08 Score=88.83 Aligned_cols=89 Identities=15% Similarity=0.154 Sum_probs=67.8
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-----cCCCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-----DAPEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-----~~p~k~DiIVSEl 155 (359)
.+|||+|||+ ++...++.| .+|+|||.|+.+++.|+++ .+++++.+|+.++ ....++|+|++-
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~- 123 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRG--IEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICAN- 123 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEE-
T ss_pred CEEEEeCCCCCHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEEC-
Confidence 4699999998 555555555 4899999999999988876 3477888998887 334569999973
Q ss_pred ccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 156 LGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..+. .+....+|..+.+.|||||.++
T Consensus 124 -~~l~-~~~~~~~l~~~~~~L~pgG~l~ 149 (227)
T 3e8s_A 124 -FALL-HQDIIELLSAMRTLLVPGGALV 149 (227)
T ss_dssp -SCCC-SSCCHHHHHHHHHTEEEEEEEE
T ss_pred -chhh-hhhHHHHHHHHHHHhCCCeEEE
Confidence 2222 3445678999999999999976
No 199
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.69 E-value=2e-08 Score=89.17 Aligned_cols=89 Identities=16% Similarity=0.078 Sum_probs=67.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs~ 159 (359)
.+|+|+|||+ ++... |.. +|++||.|+.+++.|+++. .+++++++|+.++..+ +++|+|++- +.+
T Consensus 38 ~~vLdiG~G~G~~~~~l---~~~-~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~--~~l 105 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL---PYP-QKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLF--TTL 105 (211)
T ss_dssp SEEEEETCTTCHHHHHC---CCS-EEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEE--SCT
T ss_pred CeEEEECCCCCHhHHhC---CCC-eEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEc--Chh
Confidence 3789999998 33332 543 9999999999999988764 4589999999998654 579999973 222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..-....++|..+.+.|||||.++
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~ 129 (211)
T 2gs9_A 106 EFVEDVERVLLEARRVLRPGGALV 129 (211)
T ss_dssp TTCSCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEE
Confidence 211235678899999999999864
No 200
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.69 E-value=1.7e-08 Score=102.11 Aligned_cols=104 Identities=23% Similarity=0.189 Sum_probs=79.2
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEecc--
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSEL-- 155 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEl-- 155 (359)
++|+|+|||+ ...+|++.+.+.+|+|+|.|+.++..|+++++.+|.. |+++++|++++. .++++|+|++..
T Consensus 103 ~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEEEECCCc
Confidence 4799999987 3345555554459999999999999999999998886 999999999875 467899999653
Q ss_pred --ccccCCCCC----------------hHHHHHHHhhccCCCeEEEccccc
Q 039233 156 --LGSFGDNEL----------------SPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 156 --lGs~~~~El----------------~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
.|.+.-+.. ..++|..+.++|||||+++=+.++
T Consensus 181 Sg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 181 SGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 222221111 156788899999999999855544
No 201
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.69 E-value=1.2e-08 Score=92.88 Aligned_cols=89 Identities=16% Similarity=0.141 Sum_probs=67.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cC-CCCccEEEec-cc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DA-PEKADILVSE-LL 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~-p~k~DiIVSE-ll 156 (359)
.+|||+|||+ ++..+++.| .+|++||.|+.++..|+++ ++++.+|+.++ .. ++++|+|+|- .+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l 111 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEG--IESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMISHFV 111 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHT--CCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEESCG
T ss_pred CeEEEEeCCCCHHHHHHHhCC--CcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEECCch
Confidence 3689999998 555555555 3799999999998887764 78899999886 33 4689999973 23
Q ss_pred cccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 157 GSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 157 Gs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..+. .+....+|..+.+.|||||.++
T Consensus 112 ~~~~-~~~~~~~l~~~~~~LkpgG~l~ 137 (240)
T 3dli_A 112 EHLD-PERLFELLSLCYSKMKYSSYIV 137 (240)
T ss_dssp GGSC-GGGHHHHHHHHHHHBCTTCCEE
T ss_pred hhCC-cHHHHHHHHHHHHHcCCCcEEE
Confidence 3332 3335678999999999999865
No 202
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.69 E-value=4e-08 Score=90.36 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=69.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh------cCCCCeEEEEeCcccc-cc--C-CCCccE
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL------EGWEKTVTIVSCDMRC-WD--A-PEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~------n~~~~~V~vi~~d~~~-~~--~-p~k~Di 150 (359)
.+|||+|||+ ++...++......|+|||.++.|++.|+++++. ++.. +|+++++|+.+ +. + +..+|.
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~-nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQ-NIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCT-TEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCC-eEEEEECcHHHhhhhhCCCcCeeE
Confidence 3689999998 443333333345999999999999999988753 3454 49999999987 43 2 467999
Q ss_pred EEeccccccC------CCCChHHHHHHHhhccCCCeEEE
Q 039233 151 LVSELLGSFG------DNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 151 IVSEllGs~~------~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|++-.-+-.- .....+.+|..+.+.|||||.++
T Consensus 127 v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~ 165 (235)
T 3ckk_A 127 MFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVY 165 (235)
T ss_dssp EEEESCC-----------CCCHHHHHHHHHHEEEEEEEE
T ss_pred EEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEE
Confidence 9853221110 01123568889999999999975
No 203
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.68 E-value=1.5e-08 Score=91.36 Aligned_cols=88 Identities=19% Similarity=0.142 Sum_probs=66.0
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-ccCCCCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-WDAPEKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-~~~p~k~DiIVSEllGs~ 159 (359)
++|+|+|||+ ++...++.+ .+|++||.|+.++..|+++...++ +|+++.+|+.+ +...+++|+|++.. .+
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~fD~v~~~~--~~ 144 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEEKPYDRVVVWA--TA 144 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGGCCEEEEEESS--BB
T ss_pred CEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccCCCccEEEECC--cH
Confidence 4799999997 555445555 399999999999999999987654 69999999988 33346899999632 11
Q ss_pred CCCCChHHHHHHHhhccCCCeEEE
Q 039233 160 GDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.. +.+.+.+.|||||+++
T Consensus 145 --~~----~~~~~~~~L~pgG~l~ 162 (231)
T 1vbf_A 145 --PT----LLCKPYEQLKEGGIMI 162 (231)
T ss_dssp --SS----CCHHHHHTEEEEEEEE
T ss_pred --HH----HHHHHHHHcCCCcEEE
Confidence 11 2245678999999854
No 204
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.66 E-value=2e-08 Score=101.52 Aligned_cols=106 Identities=23% Similarity=0.149 Sum_probs=79.9
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEeccc-
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSELL- 156 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEll- 156 (359)
++|+|+|||+ ...+|++.+...+|+|+|.++.++..+++|++.+|..+ |+++++|.+++. .++++|+|++..-
T Consensus 107 ~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n-v~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 107 EKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN-AIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS-EEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred CEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 4799999987 33445554444599999999999999999999999876 999999999874 4678999997642
Q ss_pred ---cccCCC---------C-------ChHHHHHHHhhccCCCeEEEccccce
Q 039233 157 ---GSFGDN---------E-------LSPECLDGAQRFLKQDGISIPSSYTS 189 (359)
Q Consensus 157 ---Gs~~~~---------E-------l~~e~L~~a~r~Lkp~Gi~IP~~~t~ 189 (359)
|.+.-+ + +..++|..+.++|||||+++=+.++.
T Consensus 186 Sg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 186 SGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp CCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 222111 0 11267888999999999998665554
No 205
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.65 E-value=4.8e-08 Score=99.23 Aligned_cols=106 Identities=25% Similarity=0.283 Sum_probs=79.8
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEecc--
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSEL-- 155 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEl-- 155 (359)
++|+|+|||+ ...+|.+.+.+.+|+|+|.|+.++..|+++++.+|..+ |+++++|++++. .++++|+|+++.
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~n-v~~~~~D~~~~~~~~~~~fD~Il~D~Pc 197 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISN-VALTHFDGRVFGAAVPEMFDAILLDAPC 197 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCS-EEEECCCSTTHHHHSTTCEEEEEEECCC
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEeCCHHHhhhhccccCCEEEECCCc
Confidence 4799999987 34455555544599999999999999999999888875 999999999874 467899999763
Q ss_pred --ccccCCC-CC---------------hHHHHHHHhhccCCCeEEEccccce
Q 039233 156 --LGSFGDN-EL---------------SPECLDGAQRFLKQDGISIPSSYTS 189 (359)
Q Consensus 156 --lGs~~~~-El---------------~~e~L~~a~r~Lkp~Gi~IP~~~t~ 189 (359)
.|.+.-+ +. ..++|..+.+.|||||+++=+.++.
T Consensus 198 Sg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 198 SGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 2222211 11 1357888899999999988554443
No 206
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.65 E-value=4.2e-08 Score=97.24 Aligned_cols=52 Identities=10% Similarity=0.135 Sum_probs=48.6
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc
Q 039233 104 LKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL 155 (359)
Q Consensus 104 ~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl 155 (359)
.+|+|+|+|+.|+..|++|++.+|+.++|+++++|+.++..+.++|+||++.
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NP 315 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANP 315 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECC
Confidence 4699999999999999999999999999999999999998888999999874
No 207
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.64 E-value=1.4e-08 Score=95.49 Aligned_cols=90 Identities=17% Similarity=0.145 Sum_probs=63.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc------CCCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD------APEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~------~p~k~DiIVSE 154 (359)
++|||+|||+ ++..+++.| .+|+|||.|+.|++.|++++..+ ++++++.++. +++++|+|+|.
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~Vv~~ 117 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFVLND 117 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEEEEE
T ss_pred CEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEEEEh
Confidence 3799999998 666656665 39999999999999999987643 2344444433 25689999984
Q ss_pred c-ccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 155 L-LGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 155 l-lGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
. +..+.. +.....|....+.| |||+++
T Consensus 118 ~~l~~~~~-~~~~~~l~~l~~lL-PGG~l~ 145 (261)
T 3iv6_A 118 RLINRFTT-EEARRACLGMLSLV-GSGTVR 145 (261)
T ss_dssp SCGGGSCH-HHHHHHHHHHHHHH-TTSEEE
T ss_pred hhhHhCCH-HHHHHHHHHHHHhC-cCcEEE
Confidence 3 222332 22455777778889 999965
No 208
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.63 E-value=3.1e-07 Score=83.19 Aligned_cols=96 Identities=11% Similarity=0.081 Sum_probs=73.6
Q ss_pred ccCCcCChhHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCC--CCeEEEEeCccccc------------------
Q 039233 83 DRVPDEEASSLTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGW--EKTVTIVSCDMRCW------------------ 142 (359)
Q Consensus 83 d~v~D~g~Gtl~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~--~~~V~vi~~d~~~~------------------ 142 (359)
++||++|||-.+.+.+++. ..+|++||.|++.++.|+++++++|+ .++|+++.+|..+.
T Consensus 32 ~~VLEiGtGySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~ 110 (202)
T 3cvo_A 32 EVILEYGSGGSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDY 110 (202)
T ss_dssp SEEEEESCSHHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHH
T ss_pred CEEEEECchHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHH
Confidence 4799999996333333432 24999999999999999999999999 89999999997653
Q ss_pred -----cCC--CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 143 -----DAP--EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 143 -----~~p--~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
..+ +++|+|+- +. .--.+|+..+.+.|+|||++|=..
T Consensus 111 ~~~i~~~~~~~~fDlIfI---Dg----~k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 111 PLAVWRTEGFRHPDVVLV---DG----RFRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHGGGGCTTCCCCSEEEE---CS----SSHHHHHHHHHHHCSSCEEEEETT
T ss_pred hhhhhccccCCCCCEEEE---eC----CCchhHHHHHHHhcCCCeEEEEeC
Confidence 123 67999994 32 112478888889999999986554
No 209
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.63 E-value=3.8e-08 Score=89.49 Aligned_cols=90 Identities=17% Similarity=0.185 Sum_probs=65.8
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-ccCCCCccEEEeccccc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-WDAPEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-~~~p~k~DiIVSEllGs 158 (359)
++|+|+|||+ ++ .+|...+ .+|++||.++.+++.|+++.+.+++.+ |+++.+|... +....++|+||+.. .
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~fD~Ii~~~--~ 167 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDGSKGFPPKAPYDVIIVTA--G 167 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCGGGCCEEEEEECS--B
T ss_pred CEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCcccCCCCCCCccEEEECC--c
Confidence 4799999997 43 4455554 399999999999999999999888877 9999999732 22223589999631 1
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+ ..+.+.+.+.|||||+++
T Consensus 168 ~------~~~~~~~~~~L~pgG~lv 186 (235)
T 1jg1_A 168 A------PKIPEPLIEQLKIGGKLI 186 (235)
T ss_dssp B------SSCCHHHHHTEEEEEEEE
T ss_pred H------HHHHHHHHHhcCCCcEEE
Confidence 1 112345678999999853
No 210
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.60 E-value=1.3e-07 Score=95.03 Aligned_cols=105 Identities=28% Similarity=0.296 Sum_probs=78.1
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CC-CCccEEEecc-
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--AP-EKADILVSEL- 155 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p-~k~DiIVSEl- 155 (359)
++|+|+|||+ ...+|...+.+.+|+|+|.++.++..++++++.+|..+ |+++++|++++. .+ +++|+|++..
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKI-VKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCS-EEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCc-EEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 4799999987 34455555443599999999999999999999888865 999999999875 33 6799999753
Q ss_pred ---ccccCCC---------CCh-------HHHHHHHhhccCCCeEEEccccc
Q 039233 156 ---LGSFGDN---------ELS-------PECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 156 ---lGs~~~~---------El~-------~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
.|.+.-+ +.. .++|..+.++|||||+++=+.++
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 2222211 111 46788899999999998854443
No 211
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.60 E-value=1.7e-08 Score=91.25 Aligned_cols=93 Identities=18% Similarity=0.138 Sum_probs=67.0
Q ss_pred ccCCcCChhH--HH-HHHHHcCC-----CCeEEEEeCCHHHHHHHHHHHHhcCC----CCeEEEEeCccccccCC-CCcc
Q 039233 83 DRVPDEEASS--LT-TAAEETGR-----KLKIYAVEKNPNAVVTLHSLVRLEGW----EKTVTIVSCDMRCWDAP-EKAD 149 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga-----~~~V~AVE~n~~a~~~a~~~~~~n~~----~~~V~vi~~d~~~~~~p-~k~D 149 (359)
++|+|+|||+ ++ .+|...|. +.+|++||.++.+++.|+++++.+++ .++|+++.+|..+.... .++|
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 165 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYN 165 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSEE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCCcc
Confidence 4799999997 33 44444543 23999999999999999999887652 24599999999883222 5799
Q ss_pred EEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 150 ILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 150 iIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+|++... ..+++..+.+.|||||+++
T Consensus 166 ~I~~~~~--------~~~~~~~~~~~LkpgG~lv 191 (227)
T 1r18_A 166 AIHVGAA--------APDTPTELINQLASGGRLI 191 (227)
T ss_dssp EEEECSC--------BSSCCHHHHHTEEEEEEEE
T ss_pred EEEECCc--------hHHHHHHHHHHhcCCCEEE
Confidence 9986321 1123456778999999843
No 212
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.59 E-value=4.7e-08 Score=90.32 Aligned_cols=99 Identities=24% Similarity=0.244 Sum_probs=72.9
Q ss_pred HHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc
Q 039233 70 YIQYQRAIGNALV----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD 143 (359)
Q Consensus 70 y~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~ 143 (359)
+..+.+.|.+.+. .+|||+|||+ ++...++.| .+|+|||.|+.++..|+++. +++++.+|++++.
T Consensus 19 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~ 89 (261)
T 3ege_A 19 DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLA 89 (261)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCC
T ss_pred cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCC
Confidence 3455666666652 3799999998 554444444 49999999998887665432 6999999999987
Q ss_pred CC-CCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeE
Q 039233 144 AP-EKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGI 181 (359)
Q Consensus 144 ~p-~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi 181 (359)
.+ +++|+|++-. +..+ +....+|..+.+.|| ||.
T Consensus 90 ~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~Lk-gG~ 125 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHF---SHLEKSFQEMQRIIR-DGT 125 (261)
T ss_dssp SCTTCBSEEEEESCGGGC---SSHHHHHHHHHHHBC-SSC
T ss_pred CCCCCEeEEEEcchHhhc---cCHHHHHHHHHHHhC-CcE
Confidence 64 6899999743 3333 345678999999999 994
No 213
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.58 E-value=4.7e-08 Score=83.75 Aligned_cols=90 Identities=17% Similarity=0.182 Sum_probs=66.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-cccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~ 159 (359)
++|+|+|||+ ++...++.+ . +|+|+|.|+.+++.|+++ ..+|+++.+| ..+ ..+++|+|++-. +..+
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~~~-~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFA-T-KLYCIDINVIALKEVKEK------FDSVITLSDP-KEI-PDNSVDFILFANSFHDM 88 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTE-E-EEEEECSCHHHHHHHHHH------CTTSEEESSG-GGS-CTTCEEEEEEESCSTTC
T ss_pred CeEEEECCCCCHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHh------CCCcEEEeCC-CCC-CCCceEEEEEccchhcc
Confidence 3799999998 555555554 3 999999999999998887 3469999999 222 246899999632 2222
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+...++|..+.+.|||||.++=.
T Consensus 89 ---~~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 89 ---DDKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp ---SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cCHHHHHHHHHHhcCCCCEEEEE
Confidence 23466889999999999997643
No 214
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.58 E-value=2.2e-07 Score=87.98 Aligned_cols=101 Identities=14% Similarity=0.058 Sum_probs=71.2
Q ss_pred cCCcCChhH-----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-------------CC
Q 039233 84 RVPDEEASS-----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-------------AP 145 (359)
Q Consensus 84 ~v~D~g~Gt-----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-------------~p 145 (359)
.++|+|||+ +..+|++.....+|++||.||.|+..|++++..++ ..+++++++|++++. +.
T Consensus 81 q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~ 159 (277)
T 3giw_A 81 QFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPELRDTLDLT 159 (277)
T ss_dssp EEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTCCTT
T ss_pred EEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcccccccccCcC
Confidence 589999995 45555543345699999999999999999886542 357999999999852 22
Q ss_pred CCccEEEec-cccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 146 EKADILVSE-LLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 146 ~k~DiIVSE-llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+++ .|++. .|..+-+.+....+|....+.|+|||.++=+.
T Consensus 160 ~p~-av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 160 RPV-ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp SCC-EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred Ccc-hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 333 35543 34433343333568888899999999977443
No 215
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.57 E-value=3.8e-08 Score=96.51 Aligned_cols=119 Identities=17% Similarity=0.096 Sum_probs=83.2
Q ss_pred HHHHHHHHhhc-----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc---CCCC----eEEEEeC
Q 039233 72 QYQRAIGNALV-----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE---GWEK----TVTIVSC 137 (359)
Q Consensus 72 ~Y~~AI~~~~~-----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n---~~~~----~V~vi~~ 137 (359)
.|.++|..... .+||++|+|+ ++..+.+.++. +|++||+++.+++.|++++... .+++ +++++.+
T Consensus 174 ~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~~~-~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~ 252 (364)
T 2qfm_A 174 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPK-MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE 252 (364)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCS-EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES
T ss_pred HHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEEC
Confidence 46666654321 3799999987 66666666765 9999999999999999986421 1333 7999999
Q ss_pred cccccc-----CCCCccEEEecccc-ccC--CCCC-hHHHHHH----HhhccCCCeEEEccccceee
Q 039233 138 DMRCWD-----APEKADILVSELLG-SFG--DNEL-SPECLDG----AQRFLKQDGISIPSSYTSFI 191 (359)
Q Consensus 138 d~~~~~-----~p~k~DiIVSEllG-s~~--~~El-~~e~L~~----a~r~Lkp~Gi~IP~~~t~~~ 191 (359)
|.+++- ..+++|+||+..-. .++ ..++ ..+.+.. +.+.|+|||+++=++...++
T Consensus 253 Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 253 DCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL 319 (364)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC
T ss_pred cHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch
Confidence 999963 25789999988754 222 2122 2344444 48999999999877766554
No 216
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.57 E-value=9.7e-08 Score=90.26 Aligned_cols=100 Identities=21% Similarity=0.284 Sum_probs=71.7
Q ss_pred cCCcCChhH------HHHHHHHc-CC---CCeEEEEeCCHHHHHHHHHHHHh-----------------------cC-C-
Q 039233 84 RVPDEEASS------LTTAAEET-GR---KLKIYAVEKNPNAVVTLHSLVRL-----------------------EG-W- 128 (359)
Q Consensus 84 ~v~D~g~Gt------l~~~A~~a-ga---~~~V~AVE~n~~a~~~a~~~~~~-----------------------n~-~- 128 (359)
+|+|+|||| +++..++. |. +.+|+|+|.|+.|++.|++++.. ++ +
T Consensus 108 rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 187 (274)
T 1af7_A 108 RVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVR 187 (274)
T ss_dssp EEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEE
T ss_pred EEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCcee
Confidence 689999997 45444433 42 35899999999999999987410 11 1
Q ss_pred -----CCeEEEEeCccccccC--CCCccEEEe-ccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 129 -----EKTVTIVSCDMRCWDA--PEKADILVS-ELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 129 -----~~~V~vi~~d~~~~~~--p~k~DiIVS-EllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.++|++.++|+.+... .+++|+|+| +.|-+| +.+....++....+.|||||.++=
T Consensus 188 v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 188 VRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp ECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred echhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEE
Confidence 1369999999998533 368999998 344444 333346688888999999999764
No 217
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.57 E-value=1.6e-08 Score=96.52 Aligned_cols=103 Identities=15% Similarity=0.077 Sum_probs=72.6
Q ss_pred CcccHHHHHHHHHH---hhc--ccCCcCCh--------hHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeE
Q 039233 66 DSVKYIQYQRAIGN---ALV--DRVPDEEA--------SSLTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTV 132 (359)
Q Consensus 66 D~vry~~Y~~AI~~---~~~--d~v~D~g~--------Gtl~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V 132 (359)
+..+|.+..+.+.. .++ ++|+|+|| |+ ..+|.+.++..+|+|||.++. + .+|
T Consensus 43 n~~~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~--------v------~~v 107 (290)
T 2xyq_A 43 NVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF--------V------SDA 107 (290)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC--------B------CSS
T ss_pred cHHHHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC--------C------CCC
Confidence 44556555544421 122 47999999 66 556777775569999999996 1 247
Q ss_pred EE-EeCccccccCCCCccEEEecccccc-----CC----CCChHHHHHHHhhccCCCeEEE
Q 039233 133 TI-VSCDMRCWDAPEKADILVSELLGSF-----GD----NELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 133 ~v-i~~d~~~~~~p~k~DiIVSEllGs~-----~~----~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++ +++|++++..++++|+|+|...-.. .+ .++..++|..+.+.|||||.++
T Consensus 108 ~~~i~gD~~~~~~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v 168 (290)
T 2xyq_A 108 DSTLIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIA 168 (290)
T ss_dssp SEEEESCGGGCCCSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEECccccCCccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEE
Confidence 88 9999999877788999999743211 11 2334578888999999999976
No 218
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.56 E-value=1.8e-08 Score=94.44 Aligned_cols=92 Identities=20% Similarity=0.131 Sum_probs=69.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh--cCC-CCeEEEEeCccccccCCCCccEEEecccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL--EGW-EKTVTIVSCDMRCWDAPEKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~--n~~-~~~V~vi~~d~~~~~~p~k~DiIVSEllG 157 (359)
.+|||+|||+ ++..+++.+ . +|++||.++.+++.|++++.. +++ ..+|+++.+|.+++. +++|+||+..-+
T Consensus 74 ~~VL~iG~G~G~~~~~ll~~~-~-~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~~d 149 (262)
T 2cmg_A 74 KEVLIVDGFDLELAHQLFKYD-T-HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQEP 149 (262)
T ss_dssp CEEEEESSCCHHHHHHHTTSS-C-EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESSCC
T ss_pred CEEEEEeCCcCHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECCCC
Confidence 4799999987 555444445 5 999999999999999886532 122 358999999999875 789999986321
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
....+..+.+.|||||+++=+
T Consensus 150 -------p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 150 -------DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp -------CHHHHHHHHTTEEEEEEEEEE
T ss_pred -------hHHHHHHHHHhcCCCcEEEEE
Confidence 123678889999999998743
No 219
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.55 E-value=3.3e-08 Score=88.44 Aligned_cols=100 Identities=11% Similarity=0.008 Sum_probs=64.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHH----HHHhcCCCCeEEEEeCccccccCCCCccEEEeccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHS----LVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~----~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEll 156 (359)
++|||+|||+ ++...++.+...+|+|||.|+.|+..+.+ +.+..++. +|+++++|++++..+...|.++.- +
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~d~v~~~-~ 106 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPPLSGVGELHVL-M 106 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTCCSCCCEEEEEEE-S
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhCCCCCCCCEEEEE-c
Confidence 4799999998 55444444333599999999997775333 33334454 599999999998765333665521 1
Q ss_pred cccCC----CCChHHHHHHHhhccCCCeEEEc
Q 039233 157 GSFGD----NELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 157 Gs~~~----~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
..... -....++|..+.+.|||||+++=
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 107 PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred cchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 11000 00125688899999999998653
No 220
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.55 E-value=2e-08 Score=91.75 Aligned_cols=100 Identities=10% Similarity=-0.104 Sum_probs=64.8
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCC-HHHHHHH---HHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKN-PNAVVTL---HSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n-~~a~~~a---~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEll 156 (359)
++|||+|||+ ++...++.....+|+|||.| +.|++.| +++.+..++.+ |+++++|++++.. ..+|+|.+=.+
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~-v~~~~~d~~~l~~-~~~d~v~~i~~ 103 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSN-VVFVIAAAESLPF-ELKNIADSISI 103 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSS-EEEECCBTTBCCG-GGTTCEEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCC-eEEEEcCHHHhhh-hccCeEEEEEE
Confidence 4799999998 44443333344589999999 6665555 77777777765 9999999998832 22354443111
Q ss_pred cccC------CCCChHHHHHHHhhccCCCeEEEc
Q 039233 157 GSFG------DNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 157 Gs~~------~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.... .....++.|..+.|.|||||.++=
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 1000 001135678889999999998643
No 221
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.54 E-value=2.3e-07 Score=99.17 Aligned_cols=116 Identities=12% Similarity=0.117 Sum_probs=81.1
Q ss_pred cccHHHHHHHHHHhhc----ccCCcCChhH--HHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHHhc------CCCCeEE
Q 039233 67 SVKYIQYQRAIGNALV----DRVPDEEASS--LTTAAEETG-RKLKIYAVEKNPNAVVTLHSLVRLE------GWEKTVT 133 (359)
Q Consensus 67 ~vry~~Y~~AI~~~~~----d~v~D~g~Gt--l~~~A~~ag-a~~~V~AVE~n~~a~~~a~~~~~~n------~~~~~V~ 133 (359)
+.-+....+++...+. ++|||+|||+ ++...++.| ...+|+|||.|+.|++.|+++++.. +. .+|+
T Consensus 703 PPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVe 781 (950)
T 3htx_A 703 PPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSAT 781 (950)
T ss_dssp SCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEE
T ss_pred chHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceE
Confidence 3344555555555553 4799999998 555555555 3349999999999999999977532 33 3699
Q ss_pred EEeCccccccCC-CCccEEEe-ccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 134 IVSCDMRCWDAP-EKADILVS-ELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 134 vi~~d~~~~~~p-~k~DiIVS-EllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
++++|+.++..+ ..+|+|++ +.+..+.+ ......+..+.+.||||+++|.
T Consensus 782 fiqGDa~dLp~~d~sFDlVV~~eVLeHL~d-p~l~~~L~eI~RvLKPG~LIIS 833 (950)
T 3htx_A 782 LYDGSILEFDSRLHDVDIGTCLEVIEHMEE-DQACEFGEKVLSLFHPKLLIVS 833 (950)
T ss_dssp EEESCTTSCCTTSCSCCEEEEESCGGGSCH-HHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEECchHhCCcccCCeeEEEEeCchhhCCh-HHHHHHHHHHHHHcCCCEEEEE
Confidence 999999998764 68999997 33333322 2233467788999999955554
No 222
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.54 E-value=1.1e-07 Score=84.07 Aligned_cols=84 Identities=19% Similarity=0.176 Sum_probs=61.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccc-ccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELL-GSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEll-Gs~ 159 (359)
++|+|+|||+ ++..+++.|+. +|+|||.|+.|++.|+++.. +++++++|+.++ ++++|+||+... +..
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~-~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~--~~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAE-SVTAFDIDPDAIETAKRNCG------GVNFMVADVSEI--SGKYDTWIMNPPFGSV 123 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBS-EEEEEESCHHHHHHHHHHCT------TSEEEECCGGGC--CCCEEEEEECCCC---
T ss_pred CEEEEEeCCccHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhcC------CCEEEECcHHHC--CCCeeEEEECCCchhc
Confidence 3699999998 66665666755 89999999999999998754 589999999986 478999998643 222
Q ss_pred CCCCChHHHHHHHhhcc
Q 039233 160 GDNELSPECLDGAQRFL 176 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~L 176 (359)
. .....+.+..+.+.|
T Consensus 124 ~-~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 124 V-KHSDRAFIDKAFETS 139 (200)
T ss_dssp -----CHHHHHHHHHHE
T ss_pred c-CchhHHHHHHHHHhc
Confidence 2 222345777777777
No 223
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.54 E-value=3.4e-08 Score=93.42 Aligned_cols=70 Identities=27% Similarity=0.283 Sum_probs=57.8
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl 155 (359)
++|+|+|||+ ++...++.| . +|+|||.++.++..|+++...++..++++++++|+.++.++ .+|+||+.+
T Consensus 30 ~~VLDiG~G~G~lt~~L~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~-~fD~vv~nl 101 (285)
T 1zq9_A 30 DVVLEVGPGTGNMTVKLLEKA-K-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP-FFDTCVANL 101 (285)
T ss_dssp CEEEEECCTTSTTHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC-CCSEEEEEC
T ss_pred CEEEEEcCcccHHHHHHHhhC-C-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch-hhcEEEEec
Confidence 4799999998 554444444 2 99999999999999999987766667899999999998776 799999964
No 224
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.53 E-value=8.8e-08 Score=92.55 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=80.7
Q ss_pred HHHHHhcCcccHHHHHHHHHHh-----------h--c--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAIGNA-----------L--V--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHS 121 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~~-----------~--~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~ 121 (359)
.|+.+.+|+.....|.+++... + . .+|+|+|||+ ++...++.....+++++|.++ ++. ++
T Consensus 147 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~~ 223 (348)
T 3lst_A 147 LDAYFDGDAEVEALYYEGMETVSAAEHLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--RH 223 (348)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTHHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--TC
T ss_pred HHHHHHhCHHHHHHHHHHHHHhhhhhHHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--cc
Confidence 5777888887777776655421 1 1 2589999998 444444444556999999944 443 44
Q ss_pred HHHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 122 LVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 122 ~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+.+..+..++|+++.+|+.+ ..| .+|+|++-. +..+. .+....+|..+.+.|||||.++
T Consensus 224 ~~~~~~~~~~v~~~~~d~~~-~~p-~~D~v~~~~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~ 283 (348)
T 3lst_A 224 RLDAPDVAGRWKVVEGDFLR-EVP-HADVHVLKRILHNWG-DEDSVRILTNCRRVMPAHGRVL 283 (348)
T ss_dssp CCCCGGGTTSEEEEECCTTT-CCC-CCSEEEEESCGGGSC-HHHHHHHHHHHHHTCCTTCEEE
T ss_pred cccccCCCCCeEEEecCCCC-CCC-CCcEEEEehhccCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 44445677889999999973 355 899999633 22222 2223568899999999999975
No 225
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.52 E-value=5.7e-07 Score=89.97 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=70.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
++|+|+|||+ ++..+++.+ . +|+|||.|+.|++.|+++.+.|+.. ++++.+|+.++. +.++|+||+..-- .
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~-~-~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~-~~~fD~Vv~dPPr-~- 364 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRG-F-NVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVS-VKGFDTVIVDPPR-A- 364 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCC-CTTCSEEEECCCT-T-
T ss_pred CEEEEeeccchHHHHHHHHcC-C-EEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcC-ccCCCEEEEcCCc-c-
Confidence 4799999987 655555543 3 9999999999999999999998886 999999999974 3489999985431 1
Q ss_pred CCCChHHHHHHHhhccCCCeEEEcc
Q 039233 161 DNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.+..+++.... .|+|+|+++-+
T Consensus 365 --g~~~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 365 --GLHPRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp --CSCHHHHHHHH-HHCCSEEEEEE
T ss_pred --chHHHHHHHHH-hcCCCcEEEEE
Confidence 12234555544 48999986544
No 226
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.51 E-value=5.1e-08 Score=91.31 Aligned_cols=102 Identities=16% Similarity=0.101 Sum_probs=68.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-----------------CCC------------Ce
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-----------------GWE------------KT 131 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-----------------~~~------------~~ 131 (359)
.+|||+|||+ ++.++++.+.. +|+|||.|+.|++.|+++++.. +.. ..
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 151 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACSHFE-DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARV 151 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGGGCS-EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHE
T ss_pred CeEEEECCCcChHHHHhhccCCC-eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhh
Confidence 3689999998 44444443333 9999999999999999865421 100 13
Q ss_pred EEEEeCcccc-ccC------CCCccEEEeccccc-cCCC-CChHHHHHHHhhccCCCeEEEcc
Q 039233 132 VTIVSCDMRC-WDA------PEKADILVSELLGS-FGDN-ELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 132 V~vi~~d~~~-~~~------p~k~DiIVSEllGs-~~~~-El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
++++.+|+++ ..+ ++++|+|+|-..-. +..+ +....+|..+.+.|||||.++=.
T Consensus 152 ~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 152 KRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp EEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7788999988 321 24599999843211 1111 12456788889999999986643
No 227
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.51 E-value=1.7e-07 Score=86.45 Aligned_cols=100 Identities=17% Similarity=0.154 Sum_probs=70.9
Q ss_pred ccHHHHHHHHHHhhc-------ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC
Q 039233 68 VKYIQYQRAIGNALV-------DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC 137 (359)
Q Consensus 68 vry~~Y~~AI~~~~~-------d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~ 137 (359)
..|....+++...+. ++|+|+|||+ ++ .++.+.+ ..+|+|||.|+.+++.|+++. .+++++.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~ 137 (269)
T 1p91_A 65 GHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVA 137 (269)
T ss_dssp TTTHHHHHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEEC
T ss_pred CCcHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEc
Confidence 445555555544321 3689999998 44 4444432 249999999999999888753 34889999
Q ss_pred ccccccCC-CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 138 DMRCWDAP-EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 138 d~~~~~~p-~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+.++..+ +.+|+|++- +. +..+..+.+.|||||.++
T Consensus 138 d~~~~~~~~~~fD~v~~~--~~-------~~~l~~~~~~L~pgG~l~ 175 (269)
T 1p91_A 138 SSHRLPFSDTSMDAIIRI--YA-------PCKAEELARVVKPGGWVI 175 (269)
T ss_dssp CTTSCSBCTTCEEEEEEE--SC-------CCCHHHHHHHEEEEEEEE
T ss_pred chhhCCCCCCceeEEEEe--CC-------hhhHHHHHHhcCCCcEEE
Confidence 99887644 579999972 21 335788889999999864
No 228
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.51 E-value=2e-07 Score=83.54 Aligned_cols=111 Identities=17% Similarity=0.147 Sum_probs=74.3
Q ss_pred cHHHHHHHhc-CcccHHHHHHHHHHhhc-ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCe
Q 039233 56 EAQTYETFEK-DSVKYIQYQRAIGNALV-DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKT 131 (359)
Q Consensus 56 ~s~~Ye~f~~-D~vry~~Y~~AI~~~~~-d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~ 131 (359)
....|+.+.. ....|....+.+...+. .+|+|+|||+ ++...+ + + +++|.|+.+++.|+++ +
T Consensus 20 ~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~----~-~-~~vD~s~~~~~~a~~~--------~ 85 (219)
T 1vlm_A 20 FVNEYERWFLVHRFAYLSELQAVKCLLPEGRGVEIGVGTGRFAVPLK----I-K-IGVEPSERMAEIARKR--------G 85 (219)
T ss_dssp THHHHHHHHHHTHHHHHHHHHHHHHHCCSSCEEEETCTTSTTHHHHT----C-C-EEEESCHHHHHHHHHT--------T
T ss_pred hHHHHHHHHHhcchhHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHH----H-H-hccCCCHHHHHHHHhc--------C
Confidence 3455655532 22334333344444443 4799999998 333322 1 2 9999999999888875 4
Q ss_pred EEEEeCccccccCC-CCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 132 VTIVSCDMRCWDAP-EKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 132 V~vi~~d~~~~~~p-~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++++.+|+.++..+ +++|+|++-. +..+ +...++|..+.+.|||||.++
T Consensus 86 ~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~ 136 (219)
T 1vlm_A 86 VFVLKGTAENLPLKDESFDFALMVTTICFV---DDPERALKEAYRILKKGGYLI 136 (219)
T ss_dssp CEEEECBTTBCCSCTTCEEEEEEESCGGGS---SCHHHHHHHHHHHEEEEEEEE
T ss_pred CEEEEcccccCCCCCCCeeEEEEcchHhhc---cCHHHHHHHHHHHcCCCcEEE
Confidence 88999999988654 5799999732 2222 234668899999999999865
No 229
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.48 E-value=2.8e-07 Score=79.98 Aligned_cols=87 Identities=18% Similarity=0.178 Sum_probs=62.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
++|+|+|||+ ++..+++.+ +|+|||.|+.|++. .++++++++|+.+...++++|+|+|...=...
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~ 91 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNPPYVPD 91 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECCCCBTT
T ss_pred CeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECCCCccC
Confidence 4799999998 666666665 99999999998765 35689999999985445789999985321100
Q ss_pred -------CCCChHHHHHHHhhccCCCeEEE
Q 039233 161 -------DNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 161 -------~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..+...+.+....+.| |||.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~ 120 (170)
T 3q87_B 92 TDDPIIGGGYLGREVIDRFVDAV-TVGMLY 120 (170)
T ss_dssp CCCTTTBCCGGGCHHHHHHHHHC-CSSEEE
T ss_pred CccccccCCcchHHHHHHHHhhC-CCCEEE
Confidence 0111234677777777 999864
No 230
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.47 E-value=8.4e-08 Score=91.38 Aligned_cols=70 Identities=16% Similarity=0.196 Sum_probs=53.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEll 156 (359)
++|+|+|||+ ++...++.+ .+|+|||.++.++..|+++.+.+++ ++++++++|+.++..+ ++|+||+.+.
T Consensus 44 ~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~~-~~D~Vv~n~p 115 (299)
T 2h1r_A 44 DIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVFP-KFDVCTANIP 115 (299)
T ss_dssp CEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCCC-CCSEEEEECC
T ss_pred CEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCcc-cCCEEEEcCC
Confidence 4799999998 555444443 3999999999999999999887777 4699999999988664 8999999643
No 231
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.46 E-value=1.2e-07 Score=89.18 Aligned_cols=110 Identities=9% Similarity=-0.061 Sum_probs=72.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
..|+|+|||+ |+.+.+......+|+|+|.|+.|++.++++...+|+. .++..+|...-.+++++|++++-.+=..+
T Consensus 134 ~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p~~~~DvaL~lkti~~L 211 (281)
T 3lcv_B 134 NTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRLDEPADVTLLLKTLPCL 211 (281)
T ss_dssp SEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCCCSCCSEEEETTCHHHH
T ss_pred ceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCCCCCcchHHHHHHHHHh
Confidence 3689999998 6655555534459999999999999999999988876 67788888888889999999973221122
Q ss_pred CCCChHHHHHHHhhccCCCeEE--Eccccceeeeecc
Q 039233 161 DNELSPECLDGAQRFLKQDGIS--IPSSYTSFIQPVT 195 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~--IP~~~t~~~~pi~ 195 (359)
+.+.-...+ .....|+++|++ +|.+.-.-=.|..
T Consensus 212 e~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm 247 (281)
T 3lcv_B 212 ETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGM 247 (281)
T ss_dssp HHHSTTHHH-HHHHHSSCSEEEEEEECC-------CH
T ss_pred hhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcch
Confidence 111111112 334568999984 5654444444443
No 232
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.45 E-value=1.1e-07 Score=94.67 Aligned_cols=110 Identities=12% Similarity=0.064 Sum_probs=74.4
Q ss_pred HHhcCccc----H-HHHHHHHHHhhc--ccCCcCChh------H---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh
Q 039233 62 TFEKDSVK----Y-IQYQRAIGNALV--DRVPDEEAS------S---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL 125 (359)
Q Consensus 62 ~f~~D~vr----y-~~Y~~AI~~~~~--d~v~D~g~G------t---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~ 125 (359)
.+..|+.+ | ..|++.+..... .+|||+||| + ...++++...+.+|+|||.|+.|. .
T Consensus 190 ~Y~tDK~~~~h~y~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~ 261 (419)
T 3sso_A 190 RYFTPKFGFLHWFTPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V 261 (419)
T ss_dssp HTTCTTBSSSCBCHHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G
T ss_pred HhCCCcccccchHHHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h
Confidence 34467777 3 466665544322 379999999 4 334444433345999999999862 1
Q ss_pred cCCCCeEEEEeCccccccC-------CCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 126 EGWEKTVTIVSCDMRCWDA-------PEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 126 n~~~~~V~vi~~d~~~~~~-------p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
...+|+++++|+.++.. .+++|+|+|.. +. ..+.....|..+.+.|||||++|=
T Consensus 262 --~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg--sH-~~~d~~~aL~el~rvLKPGGvlVi 322 (419)
T 3sso_A 262 --DELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG--SH-INAHVRTSFAALFPHVRPGGLYVI 322 (419)
T ss_dssp --CBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS--CC-CHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred --cCCCcEEEEecccccchhhhhhcccCCccEEEECC--cc-cchhHHHHHHHHHHhcCCCeEEEE
Confidence 23579999999998643 37899999853 21 112245678888999999999764
No 233
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.44 E-value=3.1e-07 Score=90.65 Aligned_cols=53 Identities=9% Similarity=0.238 Sum_probs=49.0
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccc
Q 039233 104 LKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELL 156 (359)
Q Consensus 104 ~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEll 156 (359)
.+|+|+|+|+.|++.|++|++.+|+.+.|+++++|+.++..++++|+||++.-
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPP 310 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPP 310 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCC
Confidence 47999999999999999999999999899999999999988889999998653
No 234
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.43 E-value=2e-07 Score=90.04 Aligned_cols=101 Identities=17% Similarity=0.231 Sum_probs=72.7
Q ss_pred cCCcCChhH--HH-HHHHHcCC----CCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-
Q 039233 84 RVPDEEASS--LT-TAAEETGR----KLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL- 155 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A~~aga----~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl- 155 (359)
+|+|.|||| ++ .++.+... ..+|+|+|+|+.++..|+.++..++. ++.++++|..+....+++|+||+..
T Consensus 133 ~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~~~~~fD~Ii~NPP 210 (344)
T 2f8l_A 133 SILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANLLVDPVDVVISDLP 210 (344)
T ss_dssp EEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCCCCCCEEEEEEECC
T ss_pred EEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCccccCCccEEEECCC
Confidence 689999998 33 34444322 14899999999999999999987776 5899999988765567899999984
Q ss_pred ccccCCCC------------C--h-HHHHHHHhhccCCCeE---EEccc
Q 039233 156 LGSFGDNE------------L--S-PECLDGAQRFLKQDGI---SIPSS 186 (359)
Q Consensus 156 lGs~~~~E------------l--~-~e~L~~a~r~Lkp~Gi---~IP~~ 186 (359)
+|+....+ . . ...+..+.+.|||||+ ++|++
T Consensus 211 fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 211 VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 34331110 0 1 1367888899999987 44544
No 235
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.42 E-value=7.5e-09 Score=97.31 Aligned_cols=96 Identities=14% Similarity=0.125 Sum_probs=63.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHH-HhcCCCCeEEEE--eCccccccCCCCccEEEecccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLV-RLEGWEKTVTIV--SCDMRCWDAPEKADILVSELLG 157 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~-~~n~~~~~V~vi--~~d~~~~~~p~k~DiIVSEllG 157 (359)
++|+|+|||+ ++..+++. . +|+|||.++ +...+++.. ..+..+..|+++ ++|++++. ++++|+|+|....
T Consensus 76 ~~VLDlGcGtG~~s~~la~~--~-~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~V~sd~~~ 150 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR--P-HVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP-VERTDVIMCDVGE 150 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS--T-TEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-CCCCSEEEECCCC
T ss_pred CEEEEeCcCCCHHHHHHHHc--C-cEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC-CCCCcEEEEeCcc
Confidence 3699999998 66666555 2 999999999 432222110 011122258999 99999976 6789999998662
Q ss_pred ccCCCCC----hHHHHHHHhhccCCCe--EEE
Q 039233 158 SFGDNEL----SPECLDGAQRFLKQDG--ISI 183 (359)
Q Consensus 158 s~~~~El----~~e~L~~a~r~Lkp~G--i~I 183 (359)
..+..+. +..+|..+.++||||| .++
T Consensus 151 ~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv 182 (265)
T 2oxt_A 151 SSPKWSVESERTIKILELLEKWKVKNPSADFV 182 (265)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred cCCccchhHHHHHHHHHHHHHHhccCCCeEEE
Confidence 2222111 1136778889999999 655
No 236
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.39 E-value=2.9e-07 Score=81.78 Aligned_cols=88 Identities=23% Similarity=0.309 Sum_probs=63.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC---CCCccEEEec-cc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA---PEKADILVSE-LL 156 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~---p~k~DiIVSE-ll 156 (359)
.+|+|+|||+ ++...++.| .+|+++|.|+.++..|+++. .+++.+|+.+... ++++|+|++. .+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 34 KEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGDVL 103 (230)
T ss_dssp SEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEESCG
T ss_pred CcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECChh
Confidence 3689999987 554444445 49999999999988877642 2688999987432 2689999962 22
Q ss_pred cccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 157 GSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 157 Gs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..+. ...++|..+.+.|||||.++
T Consensus 104 ~~~~---~~~~~l~~~~~~L~~gG~l~ 127 (230)
T 3cc8_A 104 EHLF---DPWAVIEKVKPYIKQNGVIL 127 (230)
T ss_dssp GGSS---CHHHHHHHTGGGEEEEEEEE
T ss_pred hhcC---CHHHHHHHHHHHcCCCCEEE
Confidence 2221 23568888899999999865
No 237
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.38 E-value=1.3e-08 Score=96.23 Aligned_cols=95 Identities=15% Similarity=0.108 Sum_probs=63.5
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHH-HhcCCCCeEEEE--eCccccccCCCCccEEEeccccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLV-RLEGWEKTVTIV--SCDMRCWDAPEKADILVSELLGS 158 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~-~~n~~~~~V~vi--~~d~~~~~~p~k~DiIVSEllGs 158 (359)
+|+|+|||+ ++..+++. . +|+|||.++ +...|+++. .....+.+|+++ ++|++++. ++++|+|+|.....
T Consensus 85 ~VLDlGcGtG~~s~~la~~--~-~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 85 TVVDLGCGRGSWSYYAASQ--P-NVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PFQADTVLCDIGES 159 (276)
T ss_dssp EEEEESCTTCHHHHHHHTS--T-TEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CCCCSEEEECCCCC
T ss_pred EEEEeccCCCHHHHHHHHc--C-CEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CCCcCEEEECCCcC
Confidence 689999998 66665555 3 999999999 433332211 111223368999 99999976 67899999976622
Q ss_pred cCCCCC----hHHHHHHHhhccCCCe--EEE
Q 039233 159 FGDNEL----SPECLDGAQRFLKQDG--ISI 183 (359)
Q Consensus 159 ~~~~El----~~e~L~~a~r~Lkp~G--i~I 183 (359)
.+..+. ...+|..+.++||||| .++
T Consensus 160 ~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v 190 (276)
T 2wa2_A 160 NPTAAVEASRTLTVLNVISRWLEYNQGCGFC 190 (276)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CCchhhhHHHHHHHHHHHHHHhccCCCcEEE
Confidence 221111 1136777889999999 765
No 238
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.37 E-value=1.8e-06 Score=82.90 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=72.2
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC----CCccEEEecc
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP----EKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p----~k~DiIVSEl 155 (359)
++|+|+|||+ ...+|...+.+.+|+|+|.++.++..++++++.+|..+ |+++++|++++... .++|+|+...
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~-v~~~~~D~~~~~~~~~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC-CELAEEDFLAVSPSDPRYHEVHYILLDP 182 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCGGGSCTTCGGGTTEEEEEECC
T ss_pred CEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEeCChHhcCccccccCCCCEEEEcC
Confidence 4799999986 33445554434499999999999999999999988865 99999999987542 4799999653
Q ss_pred ----ccccCCC-----------CCh-------HHHHHHHhhccCCCeEEEccccc
Q 039233 156 ----LGSFGDN-----------ELS-------PECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 156 ----lGs~~~~-----------El~-------~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
.|.+.-+ +.. .++|..|.++|+ ||+++=+.++
T Consensus 183 PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 183 SCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp CCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred CcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 2222110 111 246788888887 8977644333
No 239
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.36 E-value=4.5e-07 Score=88.55 Aligned_cols=116 Identities=11% Similarity=0.120 Sum_probs=77.1
Q ss_pred HHHHHhcCcccHHHHHHHHHHh-----------hc-----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAIGNA-----------LV-----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLH 120 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~~-----------~~-----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~ 120 (359)
.|+.+.+|+.....|.+++... +. .+|+|+|||+ ++...++.....+++++|. |.+++.|+
T Consensus 165 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~ 243 (368)
T 3reo_A 165 IFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP 243 (368)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC
T ss_pred HHHHHhhCHHHHHHHHHHHHhhhhhHHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh
Confidence 3666777776666665554321 11 2589999998 4443334335569999999 87776654
Q ss_pred HHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 121 SLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 121 ~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+ ..+|+++.+|+.+ ..|.. |+|++..+=.....+....+|..+.+.|||||.++=
T Consensus 244 ~-------~~~v~~~~~d~~~-~~p~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 298 (368)
T 3reo_A 244 A-------FSGVEHLGGDMFD-GVPKG-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIV 298 (368)
T ss_dssp C-------CTTEEEEECCTTT-CCCCC-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred h-------cCCCEEEecCCCC-CCCCC-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3 1569999999987 55644 999864432222223345688999999999998653
No 240
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.35 E-value=1.4e-06 Score=92.51 Aligned_cols=78 Identities=12% Similarity=0.057 Sum_probs=57.5
Q ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCC---CccEEEeccc-cc-cCCCCChHHHHHHHh---hc
Q 039233 104 LKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPE---KADILVSELL-GS-FGDNELSPECLDGAQ---RF 175 (359)
Q Consensus 104 ~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~---k~DiIVSEll-Gs-~~~~El~~e~L~~a~---r~ 175 (359)
.+|+|+|+|+.|+..|++|++.+|+.+.|++.++|+.++..|. ++|+||++.- |. +++.+...+...... +-
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 336 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHh
Confidence 4899999999999999999999999999999999999986553 7999999752 43 233222333333333 33
Q ss_pred cCCCeE
Q 039233 176 LKQDGI 181 (359)
Q Consensus 176 Lkp~Gi 181 (359)
+.|||.
T Consensus 337 ~~~g~~ 342 (703)
T 3v97_A 337 QFGGWN 342 (703)
T ss_dssp HCTTCE
T ss_pred hCCCCe
Confidence 457775
No 241
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.35 E-value=6.3e-07 Score=89.39 Aligned_cols=104 Identities=17% Similarity=0.169 Sum_probs=75.8
Q ss_pred ccCCcCChhH--H-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C-CCCccEEEecc-
Q 039233 83 DRVPDEEASS--L-TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A-PEKADILVSEL- 155 (359)
Q Consensus 83 d~v~D~g~Gt--l-~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~-p~k~DiIVSEl- 155 (359)
++|+|+|||+ . ..+|...+. .+|+|+|.|+.++..++++++.+|. .++++++|++++. . ++++|+|++..
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 4799999987 3 344444433 5999999999999999999998776 3789999999874 2 36899999754
Q ss_pred ---ccccCCCCC----------------hHHHHHHHhhccCCCeEEEccccce
Q 039233 156 ---LGSFGDNEL----------------SPECLDGAQRFLKQDGISIPSSYTS 189 (359)
Q Consensus 156 ---lGs~~~~El----------------~~e~L~~a~r~Lkp~Gi~IP~~~t~ 189 (359)
.|.+.-+.. ..++|..+.++|||||+++=+.++.
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 222221111 1367888999999999987655443
No 242
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.33 E-value=1.3e-06 Score=84.72 Aligned_cols=121 Identities=15% Similarity=0.153 Sum_probs=84.1
Q ss_pred HHHHHhcCcccHHHHHHHHHHh-------h------c--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAIGNA-------L------V--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHS 121 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~~-------~------~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~ 121 (359)
.|+.+.+++.+...|.+++... + . .+|+|+|||+ ++...++.....+++..|. |.+++.|++
T Consensus 142 ~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~ 220 (353)
T 4a6d_A 142 LFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQ 220 (353)
T ss_dssp HHHHHTSSHHHHHHHHHHHHTTHHHHHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHH
Confidence 3667777777777776665421 1 1 2579999987 4444444445678998887 778999998
Q ss_pred HHHhcCCCCeEEEEeCccccccCCCCccEEEe-ccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 122 LVRLEGWEKTVTIVSCDMRCWDAPEKADILVS-ELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 122 ~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVS-EllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++... ..+||+++.+|+.+-.. ..+|+++. ..+-.+.+ +.+.++|..+.+.|+|||.++
T Consensus 221 ~~~~~-~~~rv~~~~gD~~~~~~-~~~D~~~~~~vlh~~~d-~~~~~iL~~~~~al~pgg~ll 280 (353)
T 4a6d_A 221 HFSFQ-EEEQIDFQEGDFFKDPL-PEADLYILARVLHDWAD-GKCSHLLERIYHTCKPGGGIL 280 (353)
T ss_dssp HSCC---CCSEEEEESCTTTSCC-CCCSEEEEESSGGGSCH-HHHHHHHHHHHHHCCTTCEEE
T ss_pred hhhhc-ccCceeeecCccccCCC-CCceEEEeeeecccCCH-HHHHHHHHHHHhhCCCCCEEE
Confidence 87654 46889999999987533 46899884 33333333 335668999999999999855
No 243
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.33 E-value=2.4e-07 Score=82.41 Aligned_cols=87 Identities=23% Similarity=0.318 Sum_probs=60.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC--------C----CCc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA--------P----EKA 148 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~--------p----~k~ 148 (359)
++|+|+|||+ ++..+++.+ .+|+|||.++.+ .. .+|+++++|+++... + +++
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 92 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALREEGIEKV 92 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHTCSSE
T ss_pred CEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhcccCCcc
Confidence 4789999988 665555542 499999999842 12 359999999998641 1 489
Q ss_pred cEEEeccccc-cC----C----CCChHHHHHHHhhccCCCeEEE
Q 039233 149 DILVSELLGS-FG----D----NELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 149 DiIVSEllGs-~~----~----~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|+|+|...-. .+ + .++....|..+.+.|||||.++
T Consensus 93 D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv 136 (191)
T 3dou_A 93 DDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVL 136 (191)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 9999964211 11 0 1123346777889999999987
No 244
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.32 E-value=6.5e-07 Score=85.40 Aligned_cols=100 Identities=20% Similarity=0.199 Sum_probs=68.1
Q ss_pred HHHHHHHhh---cc-cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEE-eCcccccc--
Q 039233 73 YQRAIGNAL---VD-RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIV-SCDMRCWD-- 143 (359)
Q Consensus 73 Y~~AI~~~~---~d-~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi-~~d~~~~~-- 143 (359)
-++++...- .+ +|||+|||| ++..+++.|++ +|||||.++.|++.+.++ + .++... ..+++.+.
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~-~V~aVDvs~~mL~~a~r~---~---~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAK-LVYAVDVGTNQLVWKLRQ---D---DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCS-EEEEECSSSSCSCHHHHT---C---TTEEEECSCCGGGCCGG
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCC-EEEEEECCHHHHHHHHHh---C---cccceecccCceecchh
Confidence 345554432 23 689999998 77666667877 999999999988764331 1 234443 45676664
Q ss_pred -CCCC-ccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 144 -APEK-ADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 144 -~p~k-~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+|.. +|+|++... |- ....+|..+.|.|||||.++-
T Consensus 146 ~l~~~~fD~v~~d~s--f~---sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 146 DFTEGLPSFASIDVS--FI---SLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp GCTTCCCSEEEECCS--SS---CGGGTHHHHHHHSCTTCEEEE
T ss_pred hCCCCCCCEEEEEee--Hh---hHHHHHHHHHHHcCcCCEEEE
Confidence 3545 999998542 32 236688899999999998653
No 245
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.32 E-value=6.7e-07 Score=87.45 Aligned_cols=90 Identities=9% Similarity=0.098 Sum_probs=65.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CC-------------
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--AP------------- 145 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p------------- 145 (359)
++|+|+|||+ ++..+++. ++ +|+|||.|+.|++.|++|.+.|+.. +|+++.+|+.++. ..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~-~~-~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARN-FD-RVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGG-SS-EEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHHHHHhhcccccccccccc
Confidence 4699999987 66655553 44 9999999999999999999999985 5999999998862 11
Q ss_pred --CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 146 --EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 146 --~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.++|+||...-- .+ + ...+.+.|+++|.++
T Consensus 292 ~~~~fD~Vv~dPPr-~g---~----~~~~~~~l~~~g~iv 323 (369)
T 3bt7_A 292 KSYQCETIFVDPPR-SG---L----DSETEKMVQAYPRIL 323 (369)
T ss_dssp GGCCEEEEEECCCT-TC---C----CHHHHHHHTTSSEEE
T ss_pred ccCCCCEEEECcCc-cc---c----HHHHHHHHhCCCEEE
Confidence 279999964321 11 1 223445566777765
No 246
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.31 E-value=3.5e-07 Score=77.32 Aligned_cols=89 Identities=20% Similarity=0.178 Sum_probs=62.3
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--------C-CCCccE
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--------A-PEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--------~-p~k~Di 150 (359)
++|+|+|||+ ++ .++.+.|+..+|+++|.|+ ++.. .+++++.+|+.+.. . +.++|+
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDSKVQV 91 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCCceeE
Confidence 3799999987 44 4444446545999999999 5421 45999999999874 3 368999
Q ss_pred EEecccc-ccCCCC--------ChHHHHHHHhhccCCCeEEE
Q 039233 151 LVSELLG-SFGDNE--------LSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 151 IVSEllG-s~~~~E--------l~~e~L~~a~r~Lkp~Gi~I 183 (359)
|++...- .++... +....+..+.+.|||||.++
T Consensus 92 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 133 (180)
T 1ej0_A 92 VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFV 133 (180)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred EEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 9984321 122110 01467888899999999977
No 247
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.31 E-value=2.1e-07 Score=87.02 Aligned_cols=72 Identities=15% Similarity=0.079 Sum_probs=59.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCH-------HHHHHHHHHHHhcCCCCeEEEEeCcccccc--CC---CCc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNP-------NAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--AP---EKA 148 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~-------~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p---~k~ 148 (359)
++|+|+|||+ ++..+++.| .+|+|||.|+ .+++.|+++.+.|+..++|+++++|+.++- ++ +.+
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred CeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 5799999987 666555555 3899999999 999999999888888788999999999862 33 689
Q ss_pred cEEEeccc
Q 039233 149 DILVSELL 156 (359)
Q Consensus 149 DiIVSEll 156 (359)
|+|++..+
T Consensus 163 D~V~~dP~ 170 (258)
T 2r6z_A 163 DIVYLDPM 170 (258)
T ss_dssp SEEEECCC
T ss_pred cEEEECCC
Confidence 99998655
No 248
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.30 E-value=4.1e-07 Score=79.94 Aligned_cols=89 Identities=18% Similarity=0.180 Sum_probs=60.0
Q ss_pred ccCCcCChhH--HHH-HHHHcCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc---------------
Q 039233 83 DRVPDEEASS--LTT-AAEETGR-KLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--------------- 143 (359)
Q Consensus 83 d~v~D~g~Gt--l~~-~A~~aga-~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--------------- 143 (359)
++|+|+|||+ ++. +|.+.+. ..+|+|||.++++ .. .+|+++++|+.+..
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC-----------
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhccccccccccc
Confidence 3699999998 554 4445442 3499999999942 12 34899999998875
Q ss_pred ----------CC-CCccEEEecccccc-CC----CC----ChHHHHHHHhhccCCCeEEE
Q 039233 144 ----------AP-EKADILVSELLGSF-GD----NE----LSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 144 ----------~p-~k~DiIVSEllGs~-~~----~E----l~~e~L~~a~r~Lkp~Gi~I 183 (359)
++ +++|+|+|...-.. +. .+ +...+|..+.+.|||||.++
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv 151 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYI 151 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 33 58999998643221 11 00 01236677889999999976
No 249
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.29 E-value=8.6e-07 Score=86.45 Aligned_cols=116 Identities=15% Similarity=0.109 Sum_probs=76.6
Q ss_pred HHHHHhcCcccHHHHHHHHHH-----------hhc-----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAIGN-----------ALV-----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLH 120 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~-----------~~~-----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~ 120 (359)
.|+.+.+|+.....|.+++.. .+. .+|+|+|||+ ++...++.....+++++|. |.++..|+
T Consensus 163 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~ 241 (364)
T 3p9c_A 163 AFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP 241 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC
T ss_pred HHHHHHhCHHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh
Confidence 366677777665556554432 121 2589999998 4443334334569999999 77766554
Q ss_pred HHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 121 SLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 121 ~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+ .++|+++.+|+.+ ..|.. |+|++-.+=.....+....+|..+.+.|||||.++=
T Consensus 242 ~-------~~~v~~~~~D~~~-~~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 296 (364)
T 3p9c_A 242 Q-------FPGVTHVGGDMFK-EVPSG-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVL 296 (364)
T ss_dssp C-------CTTEEEEECCTTT-CCCCC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred h-------cCCeEEEeCCcCC-CCCCC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3 2579999999988 66644 999864332212223355688999999999998653
No 250
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.26 E-value=4.2e-07 Score=89.32 Aligned_cols=94 Identities=23% Similarity=0.399 Sum_probs=66.6
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccc
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs 158 (359)
++|+|+|||+ ++ .++.+.+...+|+|||+++.|++.| .+++++++|+.++...+++|+||++. .+.
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEPGEAFDLILGNPPYGI 110 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCCSSCEEEEEECCCCCC
T ss_pred CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCccCCCCEEEECcCccC
Confidence 3789999998 44 4444543334999999999988766 46999999999987778999999962 111
Q ss_pred cCC--------------------------CCChHHHHHHHhhccCCCeE---EEccc
Q 039233 159 FGD--------------------------NELSPECLDGAQRFLKQDGI---SIPSS 186 (359)
Q Consensus 159 ~~~--------------------------~El~~e~L~~a~r~Lkp~Gi---~IP~~ 186 (359)
... .++....+..+.++|||||. ++|.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 111 VGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp BSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred cccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 111 11122457788899999997 45654
No 251
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.25 E-value=4.1e-07 Score=88.62 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=75.3
Q ss_pred HHHHHhcCcccHHHHHHHHH-----------Hhhc-----ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAIG-----------NALV-----DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLH 120 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~-----------~~~~-----d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~ 120 (359)
.|+.+.+|+.....|.+++. ..+. .+|+|+|||+ ++...++.+...+++++|. +.++..|+
T Consensus 171 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~ 249 (372)
T 1fp1_D 171 KYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP 249 (372)
T ss_dssp ---CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC
T ss_pred HHHHHHhCHHHHHHHHHHHHhhhHHHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh
Confidence 35555667666666655432 2221 2589999998 4444444445669999999 88876665
Q ss_pred HHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 121 SLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 121 ~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+ . .+|+++.+|+.+ ..|. +|+|++-. +..+. .+....+|..+.+.|||||.++=
T Consensus 250 ~------~-~~v~~~~~d~~~-~~~~-~D~v~~~~~lh~~~-d~~~~~~l~~~~~~L~pgG~l~i 304 (372)
T 1fp1_D 250 P------L-SGIEHVGGDMFA-SVPQ-GDAMILKAVCHNWS-DEKCIEFLSNCHKALSPNGKVII 304 (372)
T ss_dssp C------C-TTEEEEECCTTT-CCCC-EEEEEEESSGGGSC-HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred h------c-CCCEEEeCCccc-CCCC-CCEEEEecccccCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence 3 2 349999999988 5665 99999632 22222 22234688899999999998653
No 252
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.24 E-value=2.5e-07 Score=88.58 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=62.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeC----CHHHHHHHHHHHHhcCC-CCeEEEEeC-ccccccCCCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEK----NPNAVVTLHSLVRLEGW-EKTVTIVSC-DMRCWDAPEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~----n~~a~~~a~~~~~~n~~-~~~V~vi~~-d~~~~~~p~k~DiIVSE 154 (359)
++|+|+|||+ ++..+++.| +|+|||. ++.+++.+ ..+.. .++|+++++ |++++. ++++|+|+|+
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~---~V~gvD~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~D~~~l~-~~~fD~V~sd 155 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLK---NVREVKGLTKGGPGHEEPI----PMSTYGWNLVRLQSGVDVFFIP-PERCDTLLCD 155 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTST---TEEEEEEECCCSTTSCCCC----CCCSTTGGGEEEECSCCTTTSC-CCCCSEEEEC
T ss_pred CEEEEEcCCCCHHHHHHHhcC---CEEEEeccccCchhHHHHH----HhhhcCCCCeEEEeccccccCC-cCCCCEEEEC
Confidence 3799999988 776666653 8999998 44322111 11112 146999999 998874 5689999998
Q ss_pred cccccCC----CCChHHHHHHHhhccCCCeEEE
Q 039233 155 LLGSFGD----NELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 155 llGs~~~----~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+.-+.+. .+.+..+|..+.++|||||.++
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v 188 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFC 188 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEE
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEE
Confidence 6543221 1111146777889999999876
No 253
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.23 E-value=1.3e-06 Score=84.42 Aligned_cols=115 Identities=18% Similarity=0.245 Sum_probs=78.1
Q ss_pred HHHHHhcCcccHHHHHHHHHH----------h----hc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 039233 59 TYETFEKDSVKYIQYQRAIGN----------A----LV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLH 120 (359)
Q Consensus 59 ~Ye~f~~D~vry~~Y~~AI~~----------~----~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~ 120 (359)
.|+.+.+|+.....|.+++.. . +. .+|+|+|||+ ++...++.....+|+++|. +.+++.|+
T Consensus 150 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~ 228 (352)
T 1fp2_A 150 FWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS 228 (352)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHTHHHHHHHHHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC
T ss_pred HHHHHHhChHHHHHHHHHHHhcchhhhhHHHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc
Confidence 467777788777777665432 1 11 3689999998 4444334334459999999 88887665
Q ss_pred HHHHhcCCCCeEEEEeCccccccCCCCccEEEecc-ccccCCCCChHHHHHHHhhccCC---CeEEEc
Q 039233 121 SLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSEL-LGSFGDNELSPECLDGAQRFLKQ---DGISIP 184 (359)
Q Consensus 121 ~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEl-lGs~~~~El~~e~L~~a~r~Lkp---~Gi~IP 184 (359)
+ .. +|+++.+|+.+ ..|. +|+|++-. +..+. ++...++|..+.+.||| ||.++=
T Consensus 229 ~------~~-~v~~~~~d~~~-~~p~-~D~v~~~~~lh~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i 286 (352)
T 1fp2_A 229 G------SN-NLTYVGGDMFT-SIPN-ADAVLLKYILHNWT-DKDCLRILKKCKEAVTNDGKRGKVTI 286 (352)
T ss_dssp C------BT-TEEEEECCTTT-CCCC-CSEEEEESCGGGSC-HHHHHHHHHHHHHHHSGGGCCCEEEE
T ss_pred c------CC-CcEEEeccccC-CCCC-ccEEEeehhhccCC-HHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 4 22 39999999977 5564 99999633 23332 22234688899999999 998653
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.22 E-value=1.7e-06 Score=86.64 Aligned_cols=104 Identities=20% Similarity=0.224 Sum_probs=73.8
Q ss_pred ccCCcCChhH---HHHHHHHcC------------CCCeEEEEeCCHHHHHHHHHHHHhcCCCC-eEEEEeCccccccCCC
Q 039233 83 DRVPDEEASS---LTTAAEETG------------RKLKIYAVEKNPNAVVTLHSLVRLEGWEK-TVTIVSCDMRCWDAPE 146 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~ag------------a~~~V~AVE~n~~a~~~a~~~~~~n~~~~-~V~vi~~d~~~~~~p~ 146 (359)
++|+|.|||| +..++.+.. ...+|||+|+|+.++..|+.++..+|.+. .+.++++|........
T Consensus 173 ~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~~ 252 (445)
T 2okc_A 173 ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPST 252 (445)
T ss_dssp CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCSS
T ss_pred CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcccC
Confidence 3689999998 333333321 11389999999999999999998888763 6889999998876667
Q ss_pred CccEEEecc-ccccCC--CC------------ChHHHHHHHhhccCCCeE---EEccc
Q 039233 147 KADILVSEL-LGSFGD--NE------------LSPECLDGAQRFLKQDGI---SIPSS 186 (359)
Q Consensus 147 k~DiIVSEl-lGs~~~--~E------------l~~e~L~~a~r~Lkp~Gi---~IP~~ 186 (359)
++|+||++. .+.... .+ .....+.++.+.|||||+ ++|.+
T Consensus 253 ~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 253 LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 999999974 222111 11 012467888899999987 35543
No 255
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.22 E-value=3.9e-06 Score=83.80 Aligned_cols=91 Identities=21% Similarity=0.159 Sum_probs=66.3
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIVSEl 155 (359)
++|+|+|||+ ++..+++.+ . +|+|||.|+.|++.|+++.+.|+.. +|+++++|+.+.- ..+++|+||++.
T Consensus 288 ~~VLDlgcG~G~~~~~la~~~-~-~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQA-A-SVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CEEEECCCCCCHHHHHHHhhC-C-EEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 4799999997 555544443 3 9999999999999999999999887 5999999998842 125799999864
Q ss_pred ccccCCCCChHHHHHHHhhccCCCeEE
Q 039233 156 LGSFGDNELSPECLDGAQRFLKQDGIS 182 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~r~Lkp~Gi~ 182 (359)
--. + +.+++.... -++|++++
T Consensus 365 Pr~-g----~~~~~~~l~-~~~p~~iv 385 (433)
T 1uwv_A 365 ARA-G----AAGVMQQII-KLEPIRIV 385 (433)
T ss_dssp CTT-C----CHHHHHHHH-HHCCSEEE
T ss_pred CCc-c----HHHHHHHHH-hcCCCeEE
Confidence 321 1 224444433 36788774
No 256
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.22 E-value=8.2e-07 Score=82.94 Aligned_cols=67 Identities=21% Similarity=0.201 Sum_probs=53.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-----CCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-----EKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-----~k~DiIVSEl 155 (359)
++|+|+|||+ ++...++.+ . +|+|||.|+.++..|+++... .++++++++|+.++.++ +++| ||+++
T Consensus 31 ~~VLEIG~G~G~lt~~La~~~-~-~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 31 DTLVEIGPGRGALTDYLLTEC-D-NLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp CEEEEECCTTTTTHHHHTTTS-S-EEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGGSCCSSCEE-EEEEC
T ss_pred CEEEEEcccccHHHHHHHHhC-C-EEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHHhccCCCeE-EEecC
Confidence 4799999998 665555555 3 999999999999999998764 35699999999998764 3567 77765
No 257
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.21 E-value=1e-06 Score=84.13 Aligned_cols=68 Identities=22% Similarity=0.267 Sum_probs=54.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCC-CccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPE-KADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~-k~DiIVSEl 155 (359)
++|+|+|||+ ++...++.+ + +|+|||.++.++..|+++.+. . ++++++++|+.++..++ .+|+||+++
T Consensus 52 ~~VLEIG~G~G~lT~~La~~~-~-~V~aVEid~~li~~a~~~~~~--~-~~v~vi~gD~l~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 52 DVVLEIGLGKGILTEELAKNA-K-KVYVIEIDKSLEPYANKLKEL--Y-NNIEIIWGDALKVDLNKLDFNKVVANL 122 (295)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-S-EEEEEESCGGGHHHHHHHHHH--C-SSEEEEESCTTTSCGGGSCCSEEEEEC
T ss_pred CEEEEECCCchHHHHHHHhcC-C-EEEEEECCHHHHHHHHHHhcc--C-CCeEEEECchhhCCcccCCccEEEEeC
Confidence 4799999998 555444443 3 999999999999999999873 3 45999999999987664 699999864
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.20 E-value=8.5e-07 Score=83.65 Aligned_cols=68 Identities=25% Similarity=0.218 Sum_probs=56.1
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCC--CccEEEecccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPE--KADILVSELLG 157 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~--k~DiIVSEllG 157 (359)
.|+|+|||+ ++...++.| . +|+|||.|+.++..|+++.. +++++++++|+.++++++ .+|.||+++-=
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~-~-~V~avEid~~~~~~l~~~~~----~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAG-A-EVTAIEKDLRLRPVLEETLS----GLPVRLVFQDALLYPWEEVPQGSLLVANLPY 120 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTT-C-CEEEEESCGGGHHHHHHHTT----TSSEEEEESCGGGSCGGGSCTTEEEEEEECS
T ss_pred eEEEEeCchHHHHHHHHHcC-C-EEEEEECCHHHHHHHHHhcC----CCCEEEEECChhhCChhhccCccEEEecCcc
Confidence 799999998 776666665 3 89999999999999998865 257999999999987763 68999998643
No 259
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.19 E-value=2.1e-06 Score=79.86 Aligned_cols=99 Identities=15% Similarity=0.169 Sum_probs=69.8
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
++|+|+|||+ |+.+.. ++ .+|+|+|+++.+++.++++...++ ....+..+|...-.+++++|++++-.+=..+
T Consensus 107 ~~VLDlGCG~gpLal~~~--~~-~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~~~~~DvvLllk~lh~L 181 (253)
T 3frh_A 107 RRVLDIACGLNPLALYER--GI-ASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPPAEAGDLALIFKLLPLL 181 (253)
T ss_dssp SEEEEETCTTTHHHHHHT--TC-SEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCCCCBCSEEEEESCHHHH
T ss_pred CeEEEecCCccHHHHHhc--cC-CeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCCCCCcchHHHHHHHHHh
Confidence 4799999998 665544 44 499999999999999999988766 4578899999998899999999863221122
Q ss_pred CCCChHHHHHHHhhccCCCeEE--Ecccc
Q 039233 161 DNELSPECLDGAQRFLKQDGIS--IPSSY 187 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~Gi~--IP~~~ 187 (359)
+.+.-...+ .+...|+++|++ +|.+.
T Consensus 182 E~q~~~~~~-~ll~aL~~~~vvVsfPtks 209 (253)
T 3frh_A 182 EREQAGSAM-ALLQSLNTPRMAVSFPTRS 209 (253)
T ss_dssp HHHSTTHHH-HHHHHCBCSEEEEEEECC-
T ss_pred hhhchhhHH-HHHHHhcCCCEEEEcChHH
Confidence 121112122 344578999884 45333
No 260
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.15 E-value=4.6e-07 Score=83.26 Aligned_cols=100 Identities=14% Similarity=0.105 Sum_probs=60.6
Q ss_pred HHHHHHHhh---cc-cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEe-Ccccccc--
Q 039233 73 YQRAIGNAL---VD-RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVS-CDMRCWD-- 143 (359)
Q Consensus 73 Y~~AI~~~~---~d-~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~-~d~~~~~-- 143 (359)
.++++...- .+ +|||+|||| ++..+++.|++ +|+|||.|+.|++.|+++.. ++.+.. .+++.+.
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~-~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~ 97 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAK-LVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLA 97 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCS-EEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGG
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCC-EEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHh
Confidence 455665442 23 689999998 66555566776 99999999999888665422 222221 1232221
Q ss_pred -CCC-CccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 144 -APE-KADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 144 -~p~-k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
++. .+|.+.....=+. ...+|..+.+.|||||.++=
T Consensus 98 ~~~~~~~d~~~~D~v~~~-----l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 98 DFEQGRPSFTSIDVSFIS-----LDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp GCCSCCCSEEEECCSSSC-----GGGTHHHHHHHSCTTCEEEE
T ss_pred HcCcCCCCEEEEEEEhhh-----HHHHHHHHHHhccCCCEEEE
Confidence 122 2455443321111 25688899999999998654
No 261
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.09 E-value=9.2e-06 Score=77.48 Aligned_cols=107 Identities=17% Similarity=0.282 Sum_probs=78.5
Q ss_pred cCCcCCh--hHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHh-c-C-C-CCeEEEEeCccccc--cCCCCccEEEec
Q 039233 84 RVPDEEA--SSLTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRL-E-G-W-EKTVTIVSCDMRCW--DAPEKADILVSE 154 (359)
Q Consensus 84 ~v~D~g~--Gtl~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~-n-~-~-~~~V~vi~~d~~~~--~~p~k~DiIVSE 154 (359)
+||-+|- |.+++...+. +.+ +|..||++|..++.+++-+.. + + + ..|++++.+|.+++ ...+++|+||.+
T Consensus 86 ~VLIiGgGdG~~~revlk~~~v~-~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D 164 (294)
T 3o4f_A 86 HVLIIGGGDGAMLREVTRHKNVE-SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISD 164 (294)
T ss_dssp EEEEESCTTSHHHHHHHTCTTCC-EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEES
T ss_pred eEEEECCCchHHHHHHHHcCCcc-eEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEe
Confidence 5666665 4466655554 445 999999999999999887532 1 1 3 35899999999997 345789999988
Q ss_pred cccccCCCC--ChHHHHHHHhhccCCCeEEEccccceee
Q 039233 155 LLGSFGDNE--LSPECLDGAQRFLKQDGISIPSSYTSFI 191 (359)
Q Consensus 155 llGs~~~~E--l~~e~L~~a~r~Lkp~Gi~IP~~~t~~~ 191 (359)
+.+..+..+ ...|.+..+.+.|+|||+++=++...+.
T Consensus 165 ~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~ 203 (294)
T 3o4f_A 165 CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFL 203 (294)
T ss_dssp CCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSS
T ss_pred CCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCccc
Confidence 876655333 3467889999999999999866554443
No 262
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.08 E-value=7.8e-07 Score=77.66 Aligned_cols=89 Identities=19% Similarity=0.198 Sum_probs=59.6
Q ss_pred ccCCcCChhH--HH-HHHHHcCCC--------CeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEE-eCcccccc-------
Q 039233 83 DRVPDEEASS--LT-TAAEETGRK--------LKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIV-SCDMRCWD------- 143 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~--------~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi-~~d~~~~~------- 143 (359)
++|+|+|||+ ++ .+|.+.|+. .+|+|||.++.+ .. .+++++ .+|+.+..
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHHHHH
Confidence 4799999998 44 445555652 499999999842 12 348889 99988753
Q ss_pred -C-CCCccEEEeccccc-cC----CCC----ChHHHHHHHhhccCCCeEEE
Q 039233 144 -A-PEKADILVSELLGS-FG----DNE----LSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 144 -~-p~k~DiIVSEllGs-~~----~~E----l~~e~L~~a~r~Lkp~Gi~I 183 (359)
. .+++|+|+|...-. .+ +.+ +...+|..+.+.|||||.++
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv 142 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFL 142 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 2 24799999854211 11 110 01256777889999999976
No 263
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.07 E-value=4.9e-06 Score=80.43 Aligned_cols=115 Identities=23% Similarity=0.260 Sum_probs=76.7
Q ss_pred HHHHHhcCcccHH--HHHHHHH----------Hhh----c--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHH
Q 039233 59 TYETFEKDSVKYI--QYQRAIG----------NAL----V--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVT 118 (359)
Q Consensus 59 ~Ye~f~~D~vry~--~Y~~AI~----------~~~----~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~ 118 (359)
.|+.+.+|+.... .|.+++. ..+ . .+|+|+|||+ ++...++.....+++++|. +.+++.
T Consensus 153 ~~~~~~~~p~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~ 231 (358)
T 1zg3_A 153 FWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGN 231 (358)
T ss_dssp HHHHHTSGGGHHHHHHHHHHHHHHHHTHHHHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSS
T ss_pred HHHHHhcChhhhhHHHHHHHHhcccHHHHHHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhh
Confidence 4677777777666 6654432 222 1 3689999998 4444444445569999999 667765
Q ss_pred HHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCC---CeEEE
Q 039233 119 LHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQ---DGISI 183 (359)
Q Consensus 119 a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp---~Gi~I 183 (359)
|++ .. +|+++.+|+.+ ..| .+|+|++-.+=....++....+|..+.+.||| ||.++
T Consensus 232 a~~------~~-~v~~~~~d~~~-~~~-~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~ 290 (358)
T 1zg3_A 232 LTG------NE-NLNFVGGDMFK-SIP-SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVI 290 (358)
T ss_dssp CCC------CS-SEEEEECCTTT-CCC-CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEE
T ss_pred ccc------CC-CcEEEeCccCC-CCC-CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 543 23 39999999988 566 59999964322212222344788899999999 99754
No 264
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.07 E-value=3.3e-06 Score=84.16 Aligned_cols=70 Identities=17% Similarity=0.125 Sum_probs=57.5
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCeEEEEeCccccc-cC--CCCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE--GWEKTVTIVSCDMRCW-DA--PEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n--~~~~~V~vi~~d~~~~-~~--p~k~DiIVSEl 155 (359)
++|+|+|||+ .+.++++.| .+|+|||.|+.|++.|++|++.+ |. ++|+++++|+.++ .. .+++|+|++..
T Consensus 95 ~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp CEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 4689999987 555555554 39999999999999999999987 77 6799999999985 21 25899999864
No 265
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.04 E-value=1.1e-07 Score=87.48 Aligned_cols=67 Identities=16% Similarity=0.257 Sum_probs=51.4
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC--CCccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP--EKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p--~k~DiIVSEl 155 (359)
++|+|+|||+ ++..+++.| .+|+|||.|+.++..|+++.+ ..++++++++|+.++..+ +++ .|||++
T Consensus 31 ~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~ 101 (245)
T 1yub_A 31 DTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNKQRY-KIVGNI 101 (245)
T ss_dssp EEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCSSEE-EEEEEC
T ss_pred CEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccCCCc-EEEEeC
Confidence 4799999997 444444445 399999999999988887764 246799999999998765 467 677764
No 266
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.04 E-value=1.2e-06 Score=86.22 Aligned_cols=91 Identities=12% Similarity=0.207 Sum_probs=61.4
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEE-EeCccccccC-CCCccEEEec-cccc
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTI-VSCDMRCWDA-PEKADILVSE-LLGS 158 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~v-i~~d~~~~~~-p~k~DiIVSE-llGs 158 (359)
+|||+|||+ ++...++.| .+|++||.|+.+++.|+++ +....... ...+.+++.. .+++|+|+|- .+-.
T Consensus 110 ~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 110 FIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAANTLCH 183 (416)
T ss_dssp EEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGG
T ss_pred EEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECChHHh
Confidence 699999998 444444555 3999999999999888765 33332211 2233433332 3689999972 2222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+ ....+.|..+.+.|||||+++
T Consensus 184 ~---~d~~~~l~~~~r~LkpgG~l~ 205 (416)
T 4e2x_A 184 I---PYVQSVLEGVDALLAPDGVFV 205 (416)
T ss_dssp C---TTHHHHHHHHHHHEEEEEEEE
T ss_pred c---CCHHHHHHHHHHHcCCCeEEE
Confidence 2 235678899999999999976
No 267
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.04 E-value=8.2e-06 Score=84.24 Aligned_cols=67 Identities=9% Similarity=0.070 Sum_probs=57.0
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--c-CCCCccEEEe
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--D-APEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~-~p~k~DiIVS 153 (359)
+|||+|||. ++...++.|+ .|+|||.++.+++.|+.....++.- .|+..+++++++ . .++++|+|++
T Consensus 69 ~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 69 NVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp EEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred eEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEE
Confidence 699999987 7777778884 8999999999999999998876644 499999999997 2 3568999996
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.03 E-value=2.7e-06 Score=80.42 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=50.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCC-------ccEE
Q 039233 83 DRVPDEEASS--LTTAAEETGRK--LKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEK-------ADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~--~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k-------~DiI 151 (359)
++|+|+|||+ ++...++.+.+ .+|+|||.|+.++..|+++. .++++++++|+.++.+++. .+.|
T Consensus 44 ~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~~~~~~~~~~~~~v 118 (279)
T 3uzu_A 44 ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFGSIARPGDEPSLRI 118 (279)
T ss_dssp CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGGGGSCSSSSCCEEE
T ss_pred CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChhHhcccccCCceEE
Confidence 4799999998 55443333322 34999999999999999883 3569999999999876543 3467
Q ss_pred Eecc
Q 039233 152 VSEL 155 (359)
Q Consensus 152 VSEl 155 (359)
|+++
T Consensus 119 v~Nl 122 (279)
T 3uzu_A 119 IGNL 122 (279)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 8765
No 269
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.03 E-value=8.7e-07 Score=82.59 Aligned_cols=69 Identities=16% Similarity=0.122 Sum_probs=52.2
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCC------CccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPE------KADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~------k~DiIVSE 154 (359)
++|+|+|||+ ++. ++++ .+.+|+|||+++.++..|+++.... ++++++++|+.++..++ ..|+|||+
T Consensus 23 ~~VLEIG~G~G~lt~-l~~~-~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 23 QAMVEIGPGLAALTE-PVGE-RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp CCEEEECCTTTTTHH-HHHT-TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHHHHTSCEEEEEE
T ss_pred CEEEEECCCCcHHHH-hhhC-CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhcccCCceEEEEC
Confidence 5799999998 566 5554 2223999999999999998876532 46999999999986543 34788887
Q ss_pred cc
Q 039233 155 LL 156 (359)
Q Consensus 155 ll 156 (359)
+-
T Consensus 98 lP 99 (252)
T 1qyr_A 98 LP 99 (252)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.99 E-value=5.3e-06 Score=79.35 Aligned_cols=71 Identities=15% Similarity=0.155 Sum_probs=55.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--CC----CCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--AP----EKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p----~k~DiIVSE 154 (359)
++|+|+|||+ .+..+++.....+|+|||.|+.|++.|+++++.++ ++|+++++|+.++. ++ .++|.|++.
T Consensus 28 ~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 28 KIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCCCCCEEEEc
Confidence 4789999987 55444443213499999999999999999998766 67999999999864 21 479999976
Q ss_pred c
Q 039233 155 L 155 (359)
Q Consensus 155 l 155 (359)
+
T Consensus 106 ~ 106 (301)
T 1m6y_A 106 L 106 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 271
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.99 E-value=4.9e-06 Score=73.86 Aligned_cols=78 Identities=22% Similarity=0.199 Sum_probs=57.7
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-CCccEEEecccccc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-EKADILVSELLGSF 159 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-~k~DiIVSEllGs~ 159 (359)
.+|+|+|||+ ++... + .+|+++|.|+. +++++.+|+.++..+ +++|+|++-. .+
T Consensus 69 ~~vLDiG~G~G~~~~~l---~--~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~--~l 125 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSI---R--NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCL--SL 125 (215)
T ss_dssp SCEEEETCTTCHHHHHC---C--SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEES--CC
T ss_pred CeEEEECCcCCHHHHHh---h--ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEeh--hc
Confidence 3689999998 33332 2 39999999986 367899999987654 5799999732 22
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
- .+...++|..+.+.|||||.++=
T Consensus 126 ~-~~~~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 126 M-GTNIRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp C-SSCHHHHHHHHHHHEEEEEEEEE
T ss_pred c-ccCHHHHHHHHHHhCCCCeEEEE
Confidence 1 24456788999999999998653
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.91 E-value=3.9e-06 Score=77.93 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=51.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCC--ccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEK--ADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k--~DiIVSEl 155 (359)
++|+|+|||+ ++...++.|+. +|+|||.|+.++..|+++ . ..+++++++|+.++.+++. ..+||+++
T Consensus 33 ~~VLDiG~G~G~lt~~L~~~~~~-~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~~~~~~~~vv~Nl 103 (249)
T 3ftd_A 33 NTVVEVGGGTGNLTKVLLQHPLK-KLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFCSLGKELKVVGNL 103 (249)
T ss_dssp CEEEEEESCHHHHHHHHTTSCCS-EEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGGGSCSSEEEEEEC
T ss_pred CEEEEEcCchHHHHHHHHHcCCC-eEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChhHccCCcEEEEEC
Confidence 4799999998 66666666555 999999999999998876 1 3569999999999876642 23677654
No 273
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.87 E-value=2.3e-06 Score=73.77 Aligned_cols=81 Identities=22% Similarity=0.127 Sum_probs=60.4
Q ss_pred ccCCcCChhHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC----CCCccEEEec-ccc
Q 039233 83 DRVPDEEASSLTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA----PEKADILVSE-LLG 157 (359)
Q Consensus 83 d~v~D~g~Gtl~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~----p~k~DiIVSE-llG 157 (359)
++|+|+|||+ | +||.|+.|++.|+++... +++++.+|++++.. ++++|+|+|- .+.
T Consensus 14 ~~vL~~~~g~-------------v-~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~ 74 (176)
T 2ld4_A 14 QFVAVVWDKS-------------S-PVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDIILSGLVPG 74 (176)
T ss_dssp SEEEEEECTT-------------S-CHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEEEEECCSTT
T ss_pred CEEEEecCCc-------------e-eeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeEEEECChhh
Confidence 3577777774 2 389999999999887532 38999999999865 4689999983 333
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.+. +...++|..+.|.|||||.++=
T Consensus 75 ~~~--~~~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 75 STT--LHSAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp CCC--CCCHHHHHHHHHHEEEEEEEEE
T ss_pred hcc--cCHHHHHHHHHHHCCCCEEEEE
Confidence 331 2246799999999999999664
No 274
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.85 E-value=1.8e-05 Score=72.93 Aligned_cols=68 Identities=10% Similarity=0.130 Sum_probs=51.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCC-ccEEEecc
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEK-ADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k-~DiIVSEl 155 (359)
++|+|+|||+ ++...++.| . +|+|||.|+.++..|+++.+. . ++++++++|+.++..+.. ...|||.+
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~--~-~~v~~~~~D~~~~~~~~~~~~~vv~nl 102 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQRC-N-FVTAIEIDHKLCKTTENKLVD--H-DNFQVLNKDILQFKFPKNQSYKIFGNI 102 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-S-EEEEECSCHHHHHHHHHHTTT--C-CSEEEECCCGGGCCCCSSCCCEEEEEC
T ss_pred CEEEEEeCCchHHHHHHHHcC-C-eEEEEECCHHHHHHHHHhhcc--C-CCeEEEEChHHhCCcccCCCeEEEEeC
Confidence 4699999998 655555555 3 999999999999999988753 2 569999999999876632 22567653
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.81 E-value=1.2e-05 Score=75.32 Aligned_cols=72 Identities=14% Similarity=0.205 Sum_probs=54.6
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh-------cC-CCCeEEEEeCccccc--cCCCCccE
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL-------EG-WEKTVTIVSCDMRCW--DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~-------n~-~~~~V~vi~~d~~~~--~~p~k~Di 150 (359)
++|+|++||+ .+..+++.|+ +|++||.|+.++..++++++. |+ ..++|+++++|+.++ ..++++|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 5799999987 6665555563 799999999988888877643 22 335799999999985 24567999
Q ss_pred EEeccc
Q 039233 151 LVSELL 156 (359)
Q Consensus 151 IVSEll 156 (359)
|+...+
T Consensus 168 V~lDP~ 173 (258)
T 2oyr_A 168 VYLDPM 173 (258)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 997754
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.69 E-value=4.6e-05 Score=71.17 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=64.6
Q ss_pred cCCcCChhH-H---HHHHH----Hc-CC-----CCeEEEEeCCH---H-----------HHHHHHHHHHh----------
Q 039233 84 RVPDEEASS-L---TTAAE----ET-GR-----KLKIYAVEKNP---N-----------AVVTLHSLVRL---------- 125 (359)
Q Consensus 84 ~v~D~g~Gt-l---~~~A~----~a-ga-----~~~V~AVE~n~---~-----------a~~~a~~~~~~---------- 125 (359)
+|+++|+|+ + .++.+ ++ +. +.+|+++|+.| + ....|+++++.
T Consensus 63 ~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r 142 (257)
T 2qy6_A 63 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHR 142 (257)
T ss_dssp EEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEE
T ss_pred EEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchhh
Confidence 689999998 2 22211 11 33 35899999987 2 23356666553
Q ss_pred cCCC---CeEEEEeCccccc--cCCC----CccEEEeccccccCC---CCC-hHHHHHHHhhccCCCeEEE
Q 039233 126 EGWE---KTVTIVSCDMRCW--DAPE----KADILVSELLGSFGD---NEL-SPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 126 n~~~---~~V~vi~~d~~~~--~~p~----k~DiIVSEllGs~~~---~El-~~e~L~~a~r~Lkp~Gi~I 183 (359)
..++ .+|+++.||+++. .++. ++|+|+ ++.|.. .++ .++.|....+.|||||+++
T Consensus 143 ~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~if---lD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 143 LLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWF---LDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp EEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEE---ECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred eeccCCceEEEEEECcHHHHHhhcccccCCeEEEEE---ECCCCcccChhhcCHHHHHHHHHHcCCCcEEE
Confidence 0122 4689999999985 2333 799999 454442 232 5779999999999999988
No 277
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.65 E-value=5.3e-05 Score=77.95 Aligned_cols=104 Identities=18% Similarity=0.115 Sum_probs=71.4
Q ss_pred ccCCcCChhH---HHHHHHHcCC-----------------CCeEEEEeCCHHHHHHHHHHHHhcCCCC----eEEEEeCc
Q 039233 83 DRVPDEEASS---LTTAAEETGR-----------------KLKIYAVEKNPNAVVTLHSLVRLEGWEK----TVTIVSCD 138 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga-----------------~~~V~AVE~n~~a~~~a~~~~~~n~~~~----~V~vi~~d 138 (359)
++|+|.+||| |..++.+... ...|||+|+|+.++..|+.++..++..+ ++.++++|
T Consensus 171 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gD 250 (541)
T 2ar0_A 171 EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGN 250 (541)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESC
T ss_pred CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCC
Confidence 3789999998 3333332211 1379999999999999999988777765 37899999
Q ss_pred ccccc--CCCCccEEEecc-ccccCC-----------CCChHHHHHHHhhccCCCeE---EEccc
Q 039233 139 MRCWD--APEKADILVSEL-LGSFGD-----------NELSPECLDGAQRFLKQDGI---SIPSS 186 (359)
Q Consensus 139 ~~~~~--~p~k~DiIVSEl-lGs~~~-----------~El~~e~L~~a~r~Lkp~Gi---~IP~~ 186 (359)
..... ...++|+||++. .+.... .......+.++.+.|||||+ ++|.+
T Consensus 251 tL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 251 TLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp TTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 87643 236899999975 222111 11122467888899999986 56654
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.65 E-value=0.00017 Score=74.25 Aligned_cols=104 Identities=16% Similarity=0.152 Sum_probs=73.7
Q ss_pred cCCcCChhH---HHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHHHhcCCC-CeEEEEeCcccccc----CCCCccEEEe
Q 039233 84 RVPDEEASS---LTTAAEETG--RKLKIYAVEKNPNAVVTLHSLVRLEGWE-KTVTIVSCDMRCWD----APEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt---l~~~A~~ag--a~~~V~AVE~n~~a~~~a~~~~~~n~~~-~~V~vi~~d~~~~~----~p~k~DiIVS 153 (359)
+|+|.+||| |..++.+.. ....+||+|+|+.++..|+.++..+|.. +++.++++|....+ ...++|+||+
T Consensus 224 ~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~Iva 303 (542)
T 3lkd_A 224 TLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLM 303 (542)
T ss_dssp EEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEE
T ss_pred EEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEEEe
Confidence 689999988 444444421 2348999999999999999999888886 46999999987652 3468999998
Q ss_pred ccc-c-ccCCC-------------------CChHHHHHHHhhccC-CCeE---EEcccc
Q 039233 154 ELL-G-SFGDN-------------------ELSPECLDGAQRFLK-QDGI---SIPSSY 187 (359)
Q Consensus 154 Ell-G-s~~~~-------------------El~~e~L~~a~r~Lk-p~Gi---~IP~~~ 187 (359)
+.- | ..... ......+.++.++|| +||+ ++|++.
T Consensus 304 NPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~ 362 (542)
T 3lkd_A 304 NPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV 362 (542)
T ss_dssp CCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH
T ss_pred cCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH
Confidence 731 1 11000 001125778889999 9987 578765
No 279
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.50 E-value=8.2e-05 Score=73.25 Aligned_cols=116 Identities=18% Similarity=0.121 Sum_probs=78.4
Q ss_pred HHHHHHHHHhhc-----ccCCcCCh--hHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh---cCC----CCeEEEEe
Q 039233 71 IQYQRAIGNALV-----DRVPDEEA--SSLTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL---EGW----EKTVTIVS 136 (359)
Q Consensus 71 ~~Y~~AI~~~~~-----d~v~D~g~--Gtl~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~---n~~----~~~V~vi~ 136 (359)
..|.+++..... .+||=+|- |.+++.+.+...+ +|..||++|..++.+++-+.. ..+ .+|++++.
T Consensus 190 ~~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~~-~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii 268 (381)
T 3c6k_A 190 LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPK-MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLI 268 (381)
T ss_dssp HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCS-EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEE
T ss_pred HHHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCCc-eeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeeh
Confidence 357777764321 35665654 4566666776665 999999999999999886421 112 24699999
Q ss_pred Ccccccc-----CCCCccEEEeccccc---c---CCC--CChHHHHHHHhhccCCCeEEEcccc
Q 039233 137 CDMRCWD-----APEKADILVSELLGS---F---GDN--ELSPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 137 ~d~~~~~-----~p~k~DiIVSEllGs---~---~~~--El~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
+|.+++- ..+++|+||..+.+. . +.. ....+.+..+.+.|+|||+++=+..
T Consensus 269 ~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 269 EDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp SCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 9998862 235899999876542 1 111 1134677888999999999986543
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.39 E-value=0.00011 Score=75.65 Aligned_cols=104 Identities=14% Similarity=0.144 Sum_probs=71.3
Q ss_pred cCCcCChhH---HHHHHHHc-------C-------CCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C
Q 039233 84 RVPDEEASS---LTTAAEET-------G-------RKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A 144 (359)
Q Consensus 84 ~v~D~g~Gt---l~~~A~~a-------g-------a~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~ 144 (359)
+|+|.+||| |..++... + ....+||+|+|+.++.+|+.++..+|....|.++++|..... .
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~ 326 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHP 326 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCT
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccc
Confidence 689999988 32222111 0 034899999999999999999988888877777899976543 2
Q ss_pred CCCccEEEecc-ccc--cCC------------------------CCChHHHHHHHhhccCCCeE---EEcccc
Q 039233 145 PEKADILVSEL-LGS--FGD------------------------NELSPECLDGAQRFLKQDGI---SIPSSY 187 (359)
Q Consensus 145 p~k~DiIVSEl-lGs--~~~------------------------~El~~e~L~~a~r~Lkp~Gi---~IP~~~ 187 (359)
..++|+||++. .|. ... .......+.++.+.|||||+ ++|++.
T Consensus 327 ~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~ 399 (544)
T 3khk_A 327 DLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGS 399 (544)
T ss_dssp TCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHH
T ss_pred cccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchh
Confidence 46899999974 221 000 00111367788899999986 667654
No 281
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.33 E-value=0.00025 Score=67.45 Aligned_cols=105 Identities=15% Similarity=0.057 Sum_probs=71.4
Q ss_pred CcccHHHHHHHHHH---hh--cccCCcCChhH------HHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHHHhcCCCCeEE
Q 039233 66 DSVKYIQYQRAIGN---AL--VDRVPDEEASS------LTTAAEETGRK-LKIYAVEKNPNAVVTLHSLVRLEGWEKTVT 133 (359)
Q Consensus 66 D~vry~~Y~~AI~~---~~--~d~v~D~g~Gt------l~~~A~~aga~-~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~ 133 (359)
.-+||.+--+.+.. ++ .++|||+|+|+ =+..+++.+.+ ..|+|+|.+|... -.+ .
T Consensus 89 nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------da~--~ 155 (344)
T 3r24_A 89 NVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------DAD--S 155 (344)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------SSS--E
T ss_pred eHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------CCC--e
Confidence 34688776666633 22 25799999743 22444555655 4999999998321 122 3
Q ss_pred EEeCccccccCCCCccEEEeccc----cccC-C----CCChHHHHHHHhhccCCCeEEE
Q 039233 134 IVSCDMRCWDAPEKADILVSELL----GSFG-D----NELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 134 vi~~d~~~~~~p~k~DiIVSEll----Gs~~-~----~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.|+||.+++....++|+|+|.+- |... + ..|....|+-|.+.|+|||.++
T Consensus 156 ~IqGD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFv 214 (344)
T 3r24_A 156 TLIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIA 214 (344)
T ss_dssp EEESCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEE
Confidence 49999988888889999999753 4311 1 2356667888899999999865
No 282
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.28 E-value=0.00032 Score=66.44 Aligned_cols=103 Identities=10% Similarity=0.017 Sum_probs=71.3
Q ss_pred hcccCCcCChhH----HHHH--HHHcC-CCCeEEEEeCCH--------------------------HHHHHHHHHHHhcC
Q 039233 81 LVDRVPDEEASS----LTTA--AEETG-RKLKIYAVEKNP--------------------------NAVVTLHSLVRLEG 127 (359)
Q Consensus 81 ~~d~v~D~g~Gt----l~~~--A~~ag-a~~~V~AVE~n~--------------------------~a~~~a~~~~~~n~ 127 (359)
+...|+++|+.+ +.++ ....| ...+|+++|..+ ..++.+++++++.|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 345789999853 3222 22222 134899999642 13567899999988
Q ss_pred CC-CeEEEEeCcccccc--C-CCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcccc
Q 039233 128 WE-KTVTIVSCDMRCWD--A-PEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 128 ~~-~~V~vi~~d~~~~~--~-p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
+. ++|+++.||..+.- . ++++|+|. ++.-. -+-..++|......|+|||++|=..+
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vf---IDaD~-y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLR---MDGDL-YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEE---ECCCS-HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEE---EcCCc-cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 84 89999999998842 2 36799998 44311 11234678888999999999998887
No 283
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.23 E-value=0.00031 Score=75.12 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=65.8
Q ss_pred cCCcCChhH--HHHH-HHHcC--CCCeEEEEeCCHHHHHHH--HHHHHhcCCCC---eEEEEeCcccccc--CCCCccEE
Q 039233 84 RVPDEEASS--LTTA-AEETG--RKLKIYAVEKNPNAVVTL--HSLVRLEGWEK---TVTIVSCDMRCWD--APEKADIL 151 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~-A~~ag--a~~~V~AVE~n~~a~~~a--~~~~~~n~~~~---~V~vi~~d~~~~~--~p~k~DiI 151 (359)
+|+|.|||| +..+ |.+.+ .+.++||+|+++.++..| +.++..|+..+ .+.+...|..+.. ...++|+|
T Consensus 324 rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDVV 403 (878)
T 3s1s_A 324 VISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVV 403 (878)
T ss_dssp EEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEEE
T ss_pred EEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCCEE
Confidence 689999988 4444 44443 134899999999999999 55554433322 1356677777632 34689999
Q ss_pred Eeccc-cc-cCC-------------------------CCChHHHHHHHhhccCCCeE---EEcccc
Q 039233 152 VSELL-GS-FGD-------------------------NELSPECLDGAQRFLKQDGI---SIPSSY 187 (359)
Q Consensus 152 VSEll-Gs-~~~-------------------------~El~~e~L~~a~r~Lkp~Gi---~IP~~~ 187 (359)
|++.- +. ... ..+....+.++.++||+||+ ++|++.
T Consensus 404 IgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 404 VMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp EECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred EECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 99742 11 100 01122356777889999987 667664
No 284
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.87 E-value=0.00012 Score=67.55 Aligned_cols=91 Identities=20% Similarity=0.199 Sum_probs=62.9
Q ss_pred cCCcCChhH--HHH-HHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC-ccccccCCCCccEEEecccccc
Q 039233 84 RVPDEEASS--LTT-AAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC-DMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~~-~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~-d~~~~~~p~k~DiIVSEllGs~ 159 (359)
.|+|+||+. .+. +|.+.|++ +|+|+|+.+.--+. -..+..-||+. |+++++ |+..+.. .++|.|+|.+=-|-
T Consensus 81 ~VvDLGaapGGWSq~~a~~~g~~-~V~avdvG~~ghe~-P~~~~s~gwn~-v~fk~gvDv~~~~~-~~~DtllcDIgeSs 156 (267)
T 3p8z_A 81 RVIDLGCGRGGWSYYCAGLKKVT-EVRGYTKGGPGHEE-PVPMSTYGWNI-VKLMSGKDVFYLPP-EKCDTLLCDIGESS 156 (267)
T ss_dssp EEEEESCTTSHHHHHHHTSTTEE-EEEEECCCSTTSCC-CCCCCCTTTTS-EEEECSCCGGGCCC-CCCSEEEECCCCCC
T ss_pred EEEEcCCCCCcHHHHHHHhcCCC-EEEEEecCCCCccC-cchhhhcCcCc-eEEEeccceeecCC-ccccEEEEecCCCC
Confidence 689999976 776 67777888 99999997632210 01122357877 999999 9866654 78999999643332
Q ss_pred C----CCCChHHHHHHHhhccCC
Q 039233 160 G----DNELSPECLDGAQRFLKQ 178 (359)
Q Consensus 160 ~----~~El~~e~L~~a~r~Lkp 178 (359)
+ +.+....+|+-+.+||++
T Consensus 157 ~~~~vE~~RtlrvLela~~wL~~ 179 (267)
T 3p8z_A 157 PSPTVEESRTIRVLKMVEPWLKN 179 (267)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCSS
T ss_pred CChhhhhhHHHHHHHHHHHhccc
Confidence 2 222334477888899998
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.87 E-value=0.0019 Score=63.13 Aligned_cols=113 Identities=18% Similarity=0.180 Sum_probs=77.3
Q ss_pred ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCC-----CeEEEEeCcccccc--CCCCccEEE
Q 039233 83 DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWE-----KTVTIVSCDMRCWD--APEKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~-----~~V~vi~~d~~~~~--~p~k~DiIV 152 (359)
++|||..+|. .+.+|+. +....|+|+|+++.-+..+++++++.+.. +.|.+...|.+.+. .++++|.|+
T Consensus 150 ~~VLD~CAaPGGKT~~la~~-~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VL 228 (359)
T 4fzv_A 150 DIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVL 228 (359)
T ss_dssp EEEEESSCTTCHHHHHHHHT-TCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEE
T ss_pred CEEEEecCCccHHHHHHHHh-cCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEE
Confidence 4789987642 2233333 33348999999999999999999876543 57999999999874 457899999
Q ss_pred eccc--cc----cCCC-C---------------ChHHHHHHHhhccCCCeEEEccccceeeeeccchh
Q 039233 153 SELL--GS----FGDN-E---------------LSPECLDGAQRFLKQDGISIPSSYTSFIQPVTASK 198 (359)
Q Consensus 153 SEll--Gs----~~~~-E---------------l~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~ 198 (359)
...- |+ .-.+ + +-.++|.+|.++|||||+++=+.+++ .|.+.+.
T Consensus 229 lDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl--~~~ENE~ 294 (359)
T 4fzv_A 229 VDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL--SHLQNEY 294 (359)
T ss_dssp EECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC--CTTTTHH
T ss_pred ECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC--chhhCHH
Confidence 5431 21 1111 0 11357888899999999998776663 3444443
No 286
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.59 E-value=0.00079 Score=64.01 Aligned_cols=93 Identities=19% Similarity=0.223 Sum_probs=62.9
Q ss_pred ccCCcCChhH--HHH-HHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC-ccccccCCCCccEEEeccccc
Q 039233 83 DRVPDEEASS--LTT-AAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC-DMRCWDAPEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt--l~~-~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~-d~~~~~~p~k~DiIVSEllGs 158 (359)
++|+|+||++ .+. +|.+.|++ +|+|+|+...--+. -..+..-+|+. |+++++ |++.+.. +++|+|||.+=-|
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~gv~-~V~avdvG~~~he~-P~~~~ql~w~l-V~~~~~~Dv~~l~~-~~~D~ivcDigeS 171 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQKRVQ-EVRGYTKGGPGHEE-PQLVQSYGWNI-VTMKSGVDVFYRPS-ECCDTLLCDIGES 171 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCTTEE-EEEEECCCSTTSCC-CCCCCBTTGGG-EEEECSCCTTSSCC-CCCSEEEECCCCC
T ss_pred CEEEEeCCCCCcHHHHHHhhcCCC-EEEEEEcCCCCccC-cchhhhcCCcc-eEEEeccCHhhCCC-CCCCEEEEECccC
Confidence 3689999976 676 77778887 99999997641100 00011235655 999999 9988866 7899999964333
Q ss_pred cC----CCCChHHHHHHHhhccCCC
Q 039233 159 FG----DNELSPECLDGAQRFLKQD 179 (359)
Q Consensus 159 ~~----~~El~~e~L~~a~r~Lkp~ 179 (359)
-+ +.+....+|+-+.+||++|
T Consensus 172 s~~~~ve~~Rtl~vLel~~~wL~~~ 196 (321)
T 3lkz_A 172 SSSAEVEEHRTIRVLEMVEDWLHRG 196 (321)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCChhhhhhHHHHHHHHHHHHhccC
Confidence 22 2223344778888999988
No 287
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.57 E-value=0.005 Score=57.97 Aligned_cols=62 Identities=19% Similarity=0.042 Sum_probs=45.8
Q ss_pred HHHHHHHHHhh--cccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEE
Q 039233 71 IQYQRAIGNAL--VDRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTI 134 (359)
Q Consensus 71 ~~Y~~AI~~~~--~d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~v 134 (359)
+..++.|...- .+.|+|.+||+ ++.+|++.| + ++++||.++.+++.|+++++...-+.++++
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g-~-~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~ 288 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWG-R-RALGVELVPRYAQLAKERFAREVPGFSLEV 288 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHHHHHSTTCCEEE
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-C-eEEEEeCCHHHHHHHHHHHHHhccccchhh
Confidence 45556665543 25799998876 788888888 3 899999999999999999876433333433
No 288
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.47 E-value=0.0039 Score=58.90 Aligned_cols=105 Identities=16% Similarity=0.214 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhhcccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-c----
Q 039233 70 YIQYQRAIGNALVDRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-W---- 142 (359)
Q Consensus 70 y~~Y~~AI~~~~~d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-~---- 142 (359)
-..|.++|...-.+.++|.=+|| |+.-|.+ +++ +++.||+++.++.++++|++. .++++|+++|... +
T Consensus 80 l~~yf~~l~~~n~~~~LDlfaGSGaLgiEaLS-~~d-~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~ 154 (283)
T 2oo3_A 80 FLEYISVIKQINLNSTLSYYPGSPYFAINQLR-SQD-RLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALL 154 (283)
T ss_dssp GHHHHHHHHHHSSSSSCCEEECHHHHHHHHSC-TTS-EEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCCceeEeCCcHHHHHHHcC-CCC-eEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhc
Confidence 45687887763234688985555 7777777 556 999999999999999988764 4779999999755 2
Q ss_pred cCCCCccEEEeccccc-cCCCCChHHHHHHHh--hccCCCeEE
Q 039233 143 DAPEKADILVSELLGS-FGDNELSPECLDGAQ--RFLKQDGIS 182 (359)
Q Consensus 143 ~~p~k~DiIVSEllGs-~~~~El~~e~L~~a~--r~Lkp~Gi~ 182 (359)
..++++|+|+ ++- +...+...+++.... ..+.++|++
T Consensus 155 ~~~~~fdLVf---iDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~ 194 (283)
T 2oo3_A 155 PPPEKRGLIF---IDPSYERKEEYKEIPYAIKNAYSKFSTGLY 194 (283)
T ss_dssp SCTTSCEEEE---ECCCCCSTTHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCCCccEEE---ECCCCCCCcHHHHHHHHHHHhCccCCCeEE
Confidence 2335799998 554 443334555665553 345678874
No 289
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.44 E-value=0.00028 Score=65.87 Aligned_cols=89 Identities=18% Similarity=0.175 Sum_probs=56.2
Q ss_pred ccCCcCChh--HHHHHHHHc---CC-CCeEEEEe--CCHHHHHHHHHHHHhcCCCCeEEEEeC-ccccccCCCCccEEEe
Q 039233 83 DRVPDEEAS--SLTTAAEET---GR-KLKIYAVE--KNPNAVVTLHSLVRLEGWEKTVTIVSC-DMRCWDAPEKADILVS 153 (359)
Q Consensus 83 d~v~D~g~G--tl~~~A~~a---ga-~~~V~AVE--~n~~a~~~a~~~~~~n~~~~~V~vi~~-d~~~~~~p~k~DiIVS 153 (359)
++|+|+||+ ..|..|++. |. +..|+|+| ..|.... ..|| +-|+++++ |++++. +.++|+|+|
T Consensus 75 ~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv-~~i~~~~G~Df~~~~-~~~~DvVLS 145 (269)
T 2px2_A 75 GKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGW-NIVTMKSGVDVFYKP-SEISDTLLC 145 (269)
T ss_dssp EEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTG-GGEEEECSCCGGGSC-CCCCSEEEE
T ss_pred CEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCc-eEEEeeccCCccCCC-CCCCCEEEe
Confidence 368999995 577776553 21 23667777 3332110 0233 33777878 999865 468999999
Q ss_pred ccccccC----CCCChHHHHHHHhhccCCCe
Q 039233 154 ELLGSFG----DNELSPECLDGAQRFLKQDG 180 (359)
Q Consensus 154 EllGs~~----~~El~~e~L~~a~r~Lkp~G 180 (359)
.+--+.| |...+...|+-|.++|+|||
T Consensus 146 DMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG 176 (269)
T 2px2_A 146 DIGESSPSAEIEEQRTLRILEMVSDWLSRGP 176 (269)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHhhcCC
Confidence 8644422 33223336777889999999
No 290
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.26 E-value=0.00046 Score=65.01 Aligned_cols=97 Identities=15% Similarity=0.158 Sum_probs=58.1
Q ss_pred cCCcCChhH--HHHHHH-HcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-CCCccEEEecccccc
Q 039233 84 RVPDEEASS--LTTAAE-ETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-PEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~-~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-p~k~DiIVSEllGs~ 159 (359)
+|+|+|||. .+..|+ +.|++ .|+|++..-++...+... ...++ + +..+.+++....+ ++++|+|+|.+.-+.
T Consensus 77 ~VLDLGaAPGGWSQvAa~~~~~~-~v~g~dVGvDl~~~pi~~-~~~g~-~-ii~~~~~~dv~~l~~~~~DlVlsD~apns 152 (277)
T 3evf_A 77 RVIDLGCGRGGWCYYAAAQKEVS-GVKGFTLGRDGHEKPMNV-QSLGW-N-IITFKDKTDIHRLEPVKCDTLLCDIGESS 152 (277)
T ss_dssp EEEEETCTTCHHHHHHHTSTTEE-EEEEECCCCTTCCCCCCC-CBTTG-G-GEEEECSCCTTTSCCCCCSEEEECCCCCC
T ss_pred EEEEecCCCCHHHHHHHHhcCCC-cceeEEEeccCccccccc-CcCCC-C-eEEEeccceehhcCCCCccEEEecCccCc
Confidence 689999977 777554 44665 899999874321000000 00122 3 4446666543333 468999999874442
Q ss_pred C----CCCChHHHHHHHhhccCCC-eEEEc
Q 039233 160 G----DNELSPECLDGAQRFLKQD-GISIP 184 (359)
Q Consensus 160 ~----~~El~~e~L~~a~r~Lkp~-Gi~IP 184 (359)
| |...+.++|+-|.++|||| |.++=
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 2 2223334578888999999 88663
No 291
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.12 E-value=0.006 Score=57.66 Aligned_cols=65 Identities=18% Similarity=0.314 Sum_probs=48.9
Q ss_pred ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--C----CCCccEEEec
Q 039233 83 DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--A----PEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--~----p~k~DiIVSE 154 (359)
+.++|.+||. -+.+..+.+ .+|+|+|.+|.|+..|++ ++. +++++++++.+++. + .+++|.|+..
T Consensus 24 g~~VD~T~G~GGHS~~il~~~--g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 24 GVYVDATLGGAGHARGILERG--GRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp CEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CEEEEeCCCCcHHHHHHHHCC--CEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcCCCCcCEEEeC
Confidence 4689998876 333322323 499999999999999988 542 58999999999974 1 1579999975
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.08 E-value=0.00048 Score=65.04 Aligned_cols=95 Identities=14% Similarity=0.012 Sum_probs=58.3
Q ss_pred cCCcCChhH--HHHHHH-HcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC--ccccccCCCCccEEEeccccc
Q 039233 84 RVPDEEASS--LTTAAE-ETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC--DMRCWDAPEKADILVSELLGS 158 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~-~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~--d~~~~~~p~k~DiIVSEllGs 158 (359)
+|+|+|||. .+..|+ +.|+. .|++++...++...+... . ..+..+..+.. |+.++ .++++|+|+|.+.-+
T Consensus 93 ~VLDLGaAPGGWsQvAa~~~gv~-sV~GvdvG~d~~~~pi~~-~--~~g~~ii~~~~~~dv~~l-~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 93 IVVDLGCGRGGWSYYAASLKNVK-KVMAFTLGVQGHEKPIMR-T--TLGWNLIRFKDKTDVFNM-EVIPGDTLLCDIGES 167 (282)
T ss_dssp EEEEETCTTCHHHHHHHTSTTEE-EEEEECCCCTTSCCCCCC-C--BTTGGGEEEECSCCGGGS-CCCCCSEEEECCCCC
T ss_pred EEEEeCCCCCHHHHHHHHhcCCC-eeeeEEeccCcccccccc-c--cCCCceEEeeCCcchhhc-CCCCcCEEEecCccC
Confidence 689999976 777555 66766 899999975432222110 0 12223333443 44443 347999999986544
Q ss_pred cC----CCCChHHHHHHHhhccCCC--eEEE
Q 039233 159 FG----DNELSPECLDGAQRFLKQD--GISI 183 (359)
Q Consensus 159 ~~----~~El~~e~L~~a~r~Lkp~--Gi~I 183 (359)
-| |...+.++|+-|.++|||| |.++
T Consensus 168 sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv 198 (282)
T 3gcz_A 168 SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFC 198 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCCCCcEE
Confidence 23 3333344678888999999 8754
No 293
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.55 E-value=0.019 Score=52.88 Aligned_cols=57 Identities=18% Similarity=0.079 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhhc--ccCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCC
Q 039233 70 YIQYQRAIGNALV--DRVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGW 128 (359)
Q Consensus 70 y~~Y~~AI~~~~~--d~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~ 128 (359)
....++.|..... |.|+|..||+ .+.+|++.| + ++++||+++.+++.|+++++.+++
T Consensus 199 ~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~g-r-~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 199 RDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLG-R-NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTT-C-EEEEEESCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-C-eEEEEeCCHHHHHHHHHHHHhccC
Confidence 4556666665542 5799987665 888888888 3 899999999999999999987653
No 294
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=94.87 E-value=0.01 Score=50.89 Aligned_cols=78 Identities=15% Similarity=0.120 Sum_probs=53.5
Q ss_pred HHHHHhhc--ccCCcCChhH---HHHHHH-HcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC--C
Q 039233 75 RAIGNALV--DRVPDEEASS---LTTAAE-ETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP--E 146 (359)
Q Consensus 75 ~AI~~~~~--d~v~D~g~Gt---l~~~A~-~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p--~ 146 (359)
+.|.+... ++|+|+|||. .+...+ +.| +.|+|+|.||.|+. ++..|+.+-.+. +
T Consensus 27 eYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g--~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y~ 88 (153)
T 2k4m_A 27 VYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSK--VDLVLTDIKPSHGG----------------IVRDDITSPRMEIYR 88 (153)
T ss_dssp HHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSC--CEEEEECSSCSSTT----------------EECCCSSSCCHHHHT
T ss_pred HHHHhcCCCCCcEEEEccCCChHHHHHHHHhCC--CeEEEEECCccccc----------------eEEccCCCCcccccC
Confidence 44455544 4899999997 554444 476 68999999998775 788888774432 4
Q ss_pred CccEEEeccccccCCCCChHHHHHHHhh
Q 039233 147 KADILVSELLGSFGDNELSPECLDGAQR 174 (359)
Q Consensus 147 k~DiIVSEllGs~~~~El~~e~L~~a~r 174 (359)
.+|+|-+ +-- ..|+.+.+++-|.+
T Consensus 89 ~~DLIYs--irP--P~El~~~i~~lA~~ 112 (153)
T 2k4m_A 89 GAALIYS--IRP--PAEIHSSLMRVADA 112 (153)
T ss_dssp TEEEEEE--ESC--CTTTHHHHHHHHHH
T ss_pred CcCEEEE--cCC--CHHHHHHHHHHHHH
Confidence 8999975 221 45677766666654
No 295
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.85 E-value=0.024 Score=55.45 Aligned_cols=63 Identities=22% Similarity=0.157 Sum_probs=48.7
Q ss_pred cCCcC--ChhHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC---------CCCccEEE
Q 039233 84 RVPDE--EASSLTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA---------PEKADILV 152 (359)
Q Consensus 84 ~v~D~--g~Gtl~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~---------p~k~DiIV 152 (359)
+++|+ |||.++..+.++|.+ .|+|||.++.|+++.+.|. .+ ..++++|++++.. +.++|+|+
T Consensus 4 ~vidLFsG~GGlslG~~~aG~~-~v~avE~d~~a~~t~~~N~-----~~-~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAGFD-VKMAVEIDQHAINTHAINF-----PR-SLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHTCE-EEEEECSCHHHHHHHHHHC-----TT-SEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred eEEEEccCcCHHHHHHHHCCCc-EEEEEeCCHHHHHHHHHhC-----CC-CceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 35666 555588888899977 7899999999988887763 33 5788999999742 35799998
Q ss_pred e
Q 039233 153 S 153 (359)
Q Consensus 153 S 153 (359)
.
T Consensus 77 g 77 (376)
T 3g7u_A 77 G 77 (376)
T ss_dssp E
T ss_pred e
Confidence 4
No 296
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.62 E-value=0.015 Score=56.11 Aligned_cols=63 Identities=13% Similarity=0.114 Sum_probs=48.0
Q ss_pred cCCcCChhH--HHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC---CC-CccEEEe
Q 039233 84 RVPDEEASS--LTTAAEETG--RKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA---PE-KADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~ag--a~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~---p~-k~DiIVS 153 (359)
+|+|+-||+ +++.+.++| .+ .|+|+|.++.|+++.+.|.. + ..++++|++++.. ++ ++|+|+.
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~-~v~~~E~d~~a~~~~~~N~~-----~-~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQ-VVAAIDVNTVANEVYKYNFP-----H-TQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEE-EEEEECCCHHHHHHHHHHCT-----T-SCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred eEEEeCcCccHHHHHHHHCCCCce-EEEEEeCCHHHHHHHHHhcc-----c-cccccCCHHHccHhHcCcCCcCEEEE
Confidence 467775554 888888888 45 79999999999999888743 2 3478999999853 22 6999984
No 297
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.57 E-value=0.028 Score=54.39 Aligned_cols=67 Identities=12% Similarity=0.187 Sum_probs=49.1
Q ss_pred ccCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-------CCCCccEEE
Q 039233 83 DRVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-------APEKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-------~p~k~DiIV 152 (359)
+.++|..+|. -+ .++.+.|.+.+|||+|.+|.|++.|+ ++ ..+++++++++..++. .+.++|.|+
T Consensus 59 giyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~g~~~~vDgIL 133 (347)
T 3tka_A 59 GIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAERDLIGKIDGIL 133 (347)
T ss_dssp CEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHTTCTTCEEEEE
T ss_pred CEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhcCCCCcccEEE
Confidence 3678887665 33 34455566679999999999998884 32 3578999999998873 123699998
Q ss_pred ec
Q 039233 153 SE 154 (359)
Q Consensus 153 SE 154 (359)
..
T Consensus 134 fD 135 (347)
T 3tka_A 134 LD 135 (347)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 298
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.45 E-value=0.037 Score=53.82 Aligned_cols=56 Identities=14% Similarity=0.077 Sum_probs=43.3
Q ss_pred ccCCcCChhH--HHHHHH-HcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc
Q 039233 83 DRVPDEEASS--LTTAAE-ETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD 143 (359)
Q Consensus 83 d~v~D~g~Gt--l~~~A~-~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~ 143 (359)
+.|+|+|.|. |+.... +.+++ +|+|||+++..+..+++.. . .++++++++|+.+++
T Consensus 60 ~~VlEIGPG~G~LT~~Ll~~~~~~-~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 60 LKVLDLYPGVGIQSAIFYNKYCPR-QYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDWS 118 (353)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCCS-EEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCHH
T ss_pred CEEEEECCCCCHHHHHHHhhCCCC-EEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccchh
Confidence 5689999876 664443 33445 9999999999998888875 2 357999999998775
No 299
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=94.43 E-value=0.036 Score=54.31 Aligned_cols=80 Identities=15% Similarity=0.142 Sum_probs=54.4
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCC-CccEEEeccccccC
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPE-KADILVSELLGSFG 160 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~-k~DiIVSEllGs~~ 160 (359)
+++|+|++. .+..+.+-| .+|+|||..+..- . +.. . .+|+.+++|..++.+++ ++|+|||.+.-.
T Consensus 214 ~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~l~~-~----l~~--~-~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~-- 281 (375)
T 4auk_A 214 WAVDLGACPGGWTYQLVKRN--MWVYSVDNGPMAQ-S----LMD--T-GQVTWLREDGFKFRPTRSNISWMVCDMVEK-- 281 (375)
T ss_dssp EEEEETCTTCHHHHHHHHTT--CEEEEECSSCCCH-H----HHT--T-TCEEEECSCTTTCCCCSSCEEEEEECCSSC--
T ss_pred EEEEeCcCCCHHHHHHHHCC--CEEEEEEhhhcCh-h----hcc--C-CCeEEEeCccccccCCCCCcCEEEEcCCCC--
Confidence 589999855 665555555 3999999876322 1 222 1 45999999999998764 799999975422
Q ss_pred CCCChHHHHHHHhhccCCC
Q 039233 161 DNELSPECLDGAQRFLKQD 179 (359)
Q Consensus 161 ~~El~~e~L~~a~r~Lkp~ 179 (359)
...++.-..+||..+
T Consensus 282 ----p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 282 ----PAKVAALMAQWLVNG 296 (375)
T ss_dssp ----HHHHHHHHHHHHHTT
T ss_pred ----hHHhHHHHHHHHhcc
Confidence 233555556777665
No 300
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=94.42 E-value=0.089 Score=53.72 Aligned_cols=72 Identities=17% Similarity=0.220 Sum_probs=50.2
Q ss_pred ccCCcCChhH---HHHHHHHcC------------CCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc----
Q 039233 83 DRVPDEEASS---LTTAAEETG------------RKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD---- 143 (359)
Q Consensus 83 d~v~D~g~Gt---l~~~A~~ag------------a~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~---- 143 (359)
++|+|-.||| |..++.+.. .+..+|++|+++.++.+|+-++...|.+. -.+.++|.-...
T Consensus 219 ~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~-~~I~~~dtL~~~~~~~ 297 (530)
T 3ufb_A 219 ESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY-PRIDPENSLRFPLREM 297 (530)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC-CEEECSCTTCSCGGGC
T ss_pred CEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc-ccccccccccCchhhh
Confidence 3688988887 333322211 12379999999999999999887777654 467788875432
Q ss_pred -CCCCccEEEecc
Q 039233 144 -APEKADILVSEL 155 (359)
Q Consensus 144 -~p~k~DiIVSEl 155 (359)
...++|+||++.
T Consensus 298 ~~~~~fD~Il~NP 310 (530)
T 3ufb_A 298 GDKDRVDVILTNP 310 (530)
T ss_dssp CGGGCBSEEEECC
T ss_pred cccccceEEEecC
Confidence 235799999975
No 301
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=94.22 E-value=0.007 Score=57.50 Aligned_cols=97 Identities=13% Similarity=0.120 Sum_probs=56.5
Q ss_pred cCCcCChhH--HHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC-ccccccCCCCccEEEecccccc
Q 039233 84 RVPDEEASS--LTTAAEE-TGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC-DMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~-aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~-d~~~~~~p~k~DiIVSEllGs~ 159 (359)
.|+|+||+. .+..|.+ .|+. .|+|++...++...... +...++ +.+++..+ |+..+ .++++|+|+|...-+-
T Consensus 84 ~vlDLGaaPGgWsqva~~~~gv~-sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l-~~~~~DlVlsD~APns 159 (300)
T 3eld_A 84 RVLDLGCGRGGWSYYAAAQKEVM-SVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTM-PTEPSDTLLCDIGESS 159 (300)
T ss_dssp EEEEETCTTCHHHHHHHTSTTEE-EEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTS-CCCCCSEEEECCCCCC
T ss_pred EEEEcCCCCCHHHHHHHHhcCCc-eeeeEEecccccccccc-ccccCC-ceEEeecCceeeec-CCCCcCEEeecCcCCC
Confidence 589999976 7766664 5665 89999987532100000 000011 22333322 44333 2468999999765442
Q ss_pred C----CCCChHHHHHHHhhccCCC-eEEEc
Q 039233 160 G----DNELSPECLDGAQRFLKQD-GISIP 184 (359)
Q Consensus 160 ~----~~El~~e~L~~a~r~Lkp~-Gi~IP 184 (359)
| |...+.++|+-|.++|+|| |.++=
T Consensus 160 G~~~~D~~rs~~LL~~A~~~LkpG~G~FV~ 189 (300)
T 3eld_A 160 SNPLVERDRTMKVLENFERWKHVNTENFCV 189 (300)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 2 2223345678889999999 87653
No 302
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.06 E-value=0.06 Score=53.08 Aligned_cols=59 Identities=17% Similarity=0.193 Sum_probs=43.8
Q ss_pred cCCcCChhH--HH-HHH-HHcCCCCeEEEEeCCHHHHHHHHHHHHh--cCCC-CeEEEEeCccccc
Q 039233 84 RVPDEEASS--LT-TAA-EETGRKLKIYAVEKNPNAVVTLHSLVRL--EGWE-KTVTIVSCDMRCW 142 (359)
Q Consensus 84 ~v~D~g~Gt--l~-~~A-~~aga~~~V~AVE~n~~a~~~a~~~~~~--n~~~-~~V~vi~~d~~~~ 142 (359)
.++|+|+++ .+ .+| +..|...+|+|+|.+|.++..++++++. |+.. ++|++++.-+-+-
T Consensus 229 ~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~~ 294 (409)
T 2py6_A 229 KMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGEN 294 (409)
T ss_dssp EEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECSS
T ss_pred EEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEECC
Confidence 578999865 33 344 3444324999999999999999999987 4434 6799998877653
No 303
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=93.73 E-value=0.053 Score=52.00 Aligned_cols=61 Identities=21% Similarity=0.118 Sum_probs=47.3
Q ss_pred cCCcCChhH--HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC--CCccEEEe
Q 039233 84 RVPDEEASS--LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP--EKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt--l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p--~k~DiIVS 153 (359)
+++|+-||+ ++..+.++|.+ .|+|+|.++.|+.+.+.|... . . ++|++++... .++|+|+.
T Consensus 13 ~~~dLFaG~Gg~~~g~~~aG~~-~v~~~e~d~~a~~t~~~N~~~--~---~---~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 13 RFIDLFAGLGGFRLALESCGAE-CVYSNEWDKYAQEVYEMNFGE--K---P---EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp EEEEETCTTTHHHHHHHHTTCE-EEEEECCCHHHHHHHHHHHSC--C---C---BSCGGGSCGGGSCCCSEEEE
T ss_pred cEEEECCCcCHHHHHHHHCCCe-EEEEEeCCHHHHHHHHHHcCC--C---C---cCCHHHcCHhhCCCCCEEEE
Confidence 467876655 88888899987 899999999999998888642 1 1 7999987532 26899984
No 304
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=92.77 E-value=0.16 Score=47.82 Aligned_cols=60 Identities=18% Similarity=0.158 Sum_probs=46.8
Q ss_pred CCcC--ChhHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC--CCccEEE
Q 039233 85 VPDE--EASSLTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP--EKADILV 152 (359)
Q Consensus 85 v~D~--g~Gtl~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p--~k~DiIV 152 (359)
|+|+ |+|-+++...+||-+ -|+|+|.++.|+++.+.| +.+ +++.+|+++++.. .++|+|+
T Consensus 3 vidLFsG~GG~~~G~~~aG~~-~v~a~e~d~~a~~ty~~N-----~~~--~~~~~DI~~i~~~~~~~~D~l~ 66 (331)
T 3ubt_Y 3 LISLFSGAGGLDLGFQKAGFR-IICANEYDKSIWKTYESN-----HSA--KLIKGDISKISSDEFPKCDGII 66 (331)
T ss_dssp EEEESCTTCHHHHHHHHTTCE-EEEEEECCTTTHHHHHHH-----CCS--EEEESCGGGCCGGGSCCCSEEE
T ss_pred EEEeCcCccHHHHHHHHCCCE-EEEEEeCCHHHHHHHHHH-----CCC--CcccCChhhCCHhhCCcccEEE
Confidence 4555 666688888999977 789999999998887765 333 5789999998532 3799998
No 305
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=92.64 E-value=0.3 Score=46.87 Aligned_cols=113 Identities=19% Similarity=0.188 Sum_probs=76.2
Q ss_pred ccHHHHHHHHHHhhc----ccCCcCChhH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC-------------
Q 039233 68 VKYIQYQRAIGNALV----DRVPDEEASS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG------------- 127 (359)
Q Consensus 68 vry~~Y~~AI~~~~~----d~v~D~g~Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~------------- 127 (359)
+|+....+.|.+.+. ..|+.+|||. --++.... .++++|-||. |+.++.-++.+...+
T Consensus 80 ~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~ 157 (334)
T 1rjd_A 80 LRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDT 157 (334)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccc
Confidence 566667777777664 2489999996 33444332 3468888888 766666566665532
Q ss_pred -------CCCeEEEEeCcccccc----------CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 128 -------WEKTVTIVSCDMRCWD----------APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 128 -------~~~~V~vi~~d~~~~~----------~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
..++.++|.+|+++.. .+....++|+|-+=..+..+....+|..+.+.+ |+|.+|
T Consensus 158 ~~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 158 AKSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp CCTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred cccccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEE
Confidence 1367999999999841 135678999998776776666666777765544 677654
No 306
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.10 E-value=0.18 Score=47.63 Aligned_cols=64 Identities=13% Similarity=0.086 Sum_probs=47.9
Q ss_pred cCCcC--ChhHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC---C--CCccEEEe
Q 039233 84 RVPDE--EASSLTTAAEETGRKLK-IYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA---P--EKADILVS 153 (359)
Q Consensus 84 ~v~D~--g~Gtl~~~A~~aga~~~-V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~---p--~k~DiIVS 153 (359)
+++|+ |+|.+++...++|.+.+ |+|+|.++.|+.+.+.|. .+ ..++.+|++++.. + .++|+|+.
T Consensus 18 ~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~-----~~-~~~~~~DI~~i~~~~i~~~~~~Dll~g 89 (295)
T 2qrv_A 18 RVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH-----QG-KIMYVGDVRSVTQKHIQEWGPFDLVIG 89 (295)
T ss_dssp EEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT-----TT-CEEEECCGGGCCHHHHHHTCCCSEEEE
T ss_pred EEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC-----CC-CceeCCChHHccHHHhcccCCcCEEEe
Confidence 46676 55568888899997744 799999999888877653 23 4678999999852 2 36999984
No 307
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.52 E-value=0.47 Score=45.18 Aligned_cols=117 Identities=11% Similarity=0.129 Sum_probs=67.2
Q ss_pred CCccccCcHHHHHHHhcCcccHHHHHHHHHHh-hc--ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 039233 49 QPLMDNLEAQTYETFEKDSVKYIQYQRAIGNA-LV--DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHS 121 (359)
Q Consensus 49 qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~-~~--d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~ 121 (359)
-|+-++|+...-- +. .+. ..+|. |+..+ ++ ++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++
T Consensus 140 ~~iP~~l~~~~aa-~~-~~~-~ta~~-al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 140 YKLPDNVTFEEGA-LI-EPL-SVGIH-ACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAA-QVVVTDLSATRLSKAKE 214 (356)
T ss_dssp EECCTTSCHHHHH-HH-HHH-HHHHH-HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHH
T ss_pred EECcCCCCHHHHH-hh-chH-HHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHH
Confidence 5566777655422 22 111 22343 33332 22 4677788876 34666778876 99999999876655543
Q ss_pred HHHhcCCCCeEEEEeCc---cccc----c--CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 122 LVRLEGWEKTVTIVSCD---MRCW----D--APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 122 ~~~~n~~~~~V~vi~~d---~~~~----~--~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.|.. .++..+ -.++ . ....+|+|+ |..| .++.+..+.+.|+++|.++=-
T Consensus 215 ----lGa~---~vi~~~~~~~~~~~~~i~~~~~~g~D~vi-d~~g-------~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 215 ----IGAD---LVLQISKESPQEIARKVEGQLGCKPEVTI-ECTG-------AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp ----TTCS---EEEECSSCCHHHHHHHHHHHHTSCCSEEE-ECSC-------CHHHHHHHHHHSCTTCEEEEC
T ss_pred ----hCCC---EEEcCcccccchHHHHHHHHhCCCCCEEE-ECCC-------ChHHHHHHHHHhcCCCEEEEE
Confidence 3332 223322 1111 0 125699998 3444 245677888999999997643
No 308
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.40 E-value=0.029 Score=53.51 Aligned_cols=74 Identities=16% Similarity=-0.016 Sum_probs=51.3
Q ss_pred HHHHHHHHhhc--ccCCcC--ChhHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCC
Q 039233 72 QYQRAIGNALV--DRVPDE--EASSLTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEK 147 (359)
Q Consensus 72 ~Y~~AI~~~~~--d~v~D~--g~Gtl~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k 147 (359)
.-++.|...-. |.|+|- |+||.+.+|.+.| + +.++||.++.++..++++++.. +.....+.+|.+++.-.+.
T Consensus 241 l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~g-r-~~ig~e~~~~~~~~~~~r~~~~--~~~~~~~~~~~~~i~~~~~ 316 (323)
T 1boo_A 241 LPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERES-R-KWISFEMKPEYVAASAFRFLDN--NISEEKITDIYNRILNGES 316 (323)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTT-C-EEEEEESCHHHHHHHHGGGSCS--CSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-C-CEEEEeCCHHHHHHHHHHHHhc--ccchHHHHHHHHHHHcCCc
Confidence 33444543322 578887 5556888999998 3 8999999999999999988753 3345666777776654444
Q ss_pred cc
Q 039233 148 AD 149 (359)
Q Consensus 148 ~D 149 (359)
+|
T Consensus 317 ~~ 318 (323)
T 1boo_A 317 LD 318 (323)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=91.25 E-value=0.11 Score=49.92 Aligned_cols=63 Identities=8% Similarity=0.049 Sum_probs=46.6
Q ss_pred cCCcCChh--HHHHHHHHcCCCC-eE-EEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC---CC-CccEEEe
Q 039233 84 RVPDEEAS--SLTTAAEETGRKL-KI-YAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA---PE-KADILVS 153 (359)
Q Consensus 84 ~v~D~g~G--tl~~~A~~aga~~-~V-~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~---p~-k~DiIVS 153 (359)
+++|+-|| -++..+.+||.+. .| +|+|.++.|+++.+.|.. +. ++++|++++.. ++ ++|+|+.
T Consensus 12 ~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~-----~~--~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 12 NVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK-----EE--VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp EEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC-----CC--CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred EEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC-----CC--cccCChhhcCHHHhccCCCCEEEe
Confidence 46777554 4888888999422 67 899999999988887753 22 67899999853 22 6899983
No 310
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=91.11 E-value=0.1 Score=49.90 Aligned_cols=89 Identities=11% Similarity=0.022 Sum_probs=57.8
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCc----------cccccCCCCc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCD----------MRCWDAPEKA 148 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d----------~~~~~~p~k~ 148 (359)
++|+=.|+|. ...+|+..|++ +|++++.++.-.+.|++. .. + +.....+ +++......+
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~l-~~----~-~~~~~~~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAGAC-PLVITDIDEGRLKFAKEI-CP----E-VVTHKVERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHH-CT----T-CEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHh-ch----h-cccccccccchHHHHHHHHHHhCCCCC
Confidence 4666678765 34677778876 799999999887777764 21 2 2222211 1112224579
Q ss_pred cEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 149 DILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 149 DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
|+++- ..| .++.+..+.+.|+++|.++=-.
T Consensus 254 Dvvid-~~g-------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 254 AVALE-CTG-------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SEEEE-CSC-------CHHHHHHHHHHSCTTCEEEECC
T ss_pred CEEEE-CCC-------ChHHHHHHHHHhcCCCEEEEEc
Confidence 99983 444 3457788889999999977443
No 311
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=90.85 E-value=0.051 Score=52.25 Aligned_cols=87 Identities=20% Similarity=0.134 Sum_probs=55.9
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-----c-CCCCccEEE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-----D-APEKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-----~-~p~k~DiIV 152 (359)
++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++. |... ++..+-.++ + .+..+|+|+
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~Ga~-~Vi~~~~~~~~~~~a~~l----Ga~~---vi~~~~~~~~~~~~~~~~gg~D~vi 263 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCGAS-IIIAVDIVESRLELAKQL----GATH---VINSKTQDPVAAIKEITDGGVNFAL 263 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH----TCSE---EEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHHHHc----CCCE---EecCCccCHHHHHHHhcCCCCcEEE
Confidence 4677778876 34666778876 899999999777666543 3322 233221111 0 123699998
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|..| .++.+..+.+.|+++|.++--
T Consensus 264 -d~~g-------~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 264 -ESTG-------SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp -ECSC-------CHHHHHHHHHTEEEEEEEEEC
T ss_pred -ECCC-------CHHHHHHHHHHHhcCCEEEEe
Confidence 3444 245788888999999997643
No 312
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=90.76 E-value=1.1 Score=42.49 Aligned_cols=115 Identities=12% Similarity=0.069 Sum_probs=75.9
Q ss_pred ccHHHHHHHHHHhhc---ccCCcCChhHHHHHHHHc--CCCCeEEEEeCCHHHHHHHHHHHHhcC--CCCeEEEEeCccc
Q 039233 68 VKYIQYQRAIGNALV---DRVPDEEASSLTTAAEET--GRKLKIYAVEKNPNAVVTLHSLVRLEG--WEKTVTIVSCDMR 140 (359)
Q Consensus 68 vry~~Y~~AI~~~~~---d~v~D~g~Gtl~~~A~~a--ga~~~V~AVE~n~~a~~~a~~~~~~n~--~~~~V~vi~~d~~ 140 (359)
+|+....+++..++. +.|+++|||.=+. |.+. +...+||=|| .|..+...++.+...+ -.++.++|.+|++
T Consensus 86 ~Rt~~~d~~v~~~~~~g~~QvV~LGaGlDTr-a~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~ 163 (310)
T 2uyo_A 86 VRTNFFDTYFNNAVIDGIRQFVILASGLDSR-AYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLR 163 (310)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCCH-HHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeCCCCCch-hhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchH
Confidence 466666677776653 3589999995111 3333 2346999999 6888888888876543 3577999999999
Q ss_pred cccC----------CCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 141 CWDA----------PEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 141 ~~~~----------p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+ .. +.+.=++|+|-+=.++..+....+|......+.||+.++=+
T Consensus 164 d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d 217 (310)
T 2uyo_A 164 Q-DWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVE 217 (310)
T ss_dssp S-CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred h-hHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 7 31 13445777776555554455556777777777788765433
No 313
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.40 E-value=0.046 Score=52.17 Aligned_cols=86 Identities=16% Similarity=0.086 Sum_probs=55.2
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-------ccCCCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-------WDAPEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-------~~~p~k~DiI 151 (359)
++|+-.|+|. ...+|+..|++ +|++++.+++-.+.|++. |.. .++..+-.+ ......+|++
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAG-RIFAVGSRKHCCDIALEY----GAT---DIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCS-SEEEECCCHHHHHHHHHH----TCC---EEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCc-EEEEECCCHHHHHHHHHh----CCc---eEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 4677678876 34666777876 899999999766666553 332 233322222 1223469999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+ |..|. ++.+..+.+.|+++|.++=
T Consensus 240 ~-d~~g~-------~~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 240 V-IAGGD-------VHTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp E-ECSSC-------TTHHHHHHHHEEEEEEEEE
T ss_pred E-ECCCC-------hHHHHHHHHHHhcCCEEEE
Confidence 8 34442 3477788889999999763
No 314
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=89.78 E-value=0.18 Score=48.37 Aligned_cols=63 Identities=13% Similarity=0.142 Sum_probs=45.7
Q ss_pred cCCcC--ChhHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC---C-CCccEEE
Q 039233 84 RVPDE--EASSLTTAAEETGRKL-KIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA---P-EKADILV 152 (359)
Q Consensus 84 ~v~D~--g~Gtl~~~A~~aga~~-~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~---p-~k~DiIV 152 (359)
+++|+ |+|-++..+.+||... .|+|+|.++.|+++.+.|. .+ ..++++|++++.. + .++|+|+
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~-----~~-~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF-----PE-TNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-----TT-SCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC-----CC-CceeccccccCCHHHhccCCCCEEE
Confidence 35666 4555888888888622 6899999999888877653 33 3578899999853 2 2689998
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.23 E-value=0.3 Score=46.94 Aligned_cols=88 Identities=14% Similarity=0.124 Sum_probs=56.4
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc---------cCCCCcc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW---------DAPEKAD 149 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~---------~~p~k~D 149 (359)
++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++. |... ++.-+-.++ ..+..+|
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~l----Ga~~---vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAGAT-TVILSTRQATKRRLAEEV----GATA---TVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHHHHH----TCSE---EECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHc----CCCE---EECCCCcCHHHHHHhhhhccCCCCC
Confidence 4666678765 34667778877 999999999776666552 3322 222211111 1123799
Q ss_pred EEEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 150 ILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 150 iIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+++- ..| .++.+..+.+.|+++|.++=-.
T Consensus 256 vvid-~~G-------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 256 VVIE-CAG-------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEE-CSC-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEE-CCC-------CHHHHHHHHHHhccCCEEEEEe
Confidence 9983 344 3567888889999999976433
No 316
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=88.55 E-value=0.33 Score=46.92 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=56.2
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccc--------cccCCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMR--------CWDAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~--------~~~~p~k~Di 150 (359)
++|+-.|+|. ...+|+..|++ +|++++.+++-.+.|++ .|. + +|.-.-. ++.....+|+
T Consensus 187 ~~VlV~GaG~vG~~aiqlAk~~Ga~-~Vi~~~~~~~~~~~a~~----lGa-~---~i~~~~~~~~~~~v~~~t~g~g~Dv 257 (398)
T 1kol_A 187 STVYVAGAGPVGLAAAASARLLGAA-VVIVGDLNPARLAHAKA----QGF-E---IADLSLDTPLHEQIAALLGEPEVDC 257 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHH----TTC-E---EEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCC-eEEEEcCCHHHHHHHHH----cCC-c---EEccCCcchHHHHHHHHhCCCCCCE
Confidence 4677778876 34667778877 89999999976666643 233 2 2322111 1112246999
Q ss_pred EEeccccccC--------CCCChHHHHHHHhhccCCCeEEEc
Q 039233 151 LVSELLGSFG--------DNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 151 IVSEllGs~~--------~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
|+ |..|.-. ..+..++.+..+.+.|+++|.++-
T Consensus 258 vi-d~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 258 AV-DAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp EE-ECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred EE-ECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEE
Confidence 98 4555321 011123478888899999999763
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.17 E-value=1.5 Score=42.41 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=55.8
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--------cCCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--------~~p~k~Di 150 (359)
++|+-.|+|. ...+|+..|++ +|+|++.|+.-.+.|++ .|. + ++.-+-.++ .....+|+
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa-~---~i~~~~~~~~~~~~~~~~~g~g~Dv 257 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLLGAA-CVIVGDQNPERLKLLSD----AGF-E---TIDLRNSAPLRDQIDQILGKPEVDC 257 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHT----TTC-E---EEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHHH----cCC-c---EEcCCCcchHHHHHHHHhCCCCCCE
Confidence 4678788876 34666677876 99999999876655542 233 2 333221221 11236999
Q ss_pred EEeccccccCC-------CCChHHHHHHHhhccCCCeEEEcc
Q 039233 151 LVSELLGSFGD-------NELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~-------~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|+ |..|.-.. .+..++.+..+.+.|+++|+++--
T Consensus 258 vi-d~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 258 GV-DAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EE-ECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EE-ECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 98 34553110 001234678888999999998643
No 318
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=87.08 E-value=0.15 Score=48.44 Aligned_cols=87 Identities=13% Similarity=0.093 Sum_probs=54.4
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~DiI 151 (359)
++|+-.|+|. ...+|+..|++ +|++++.+++-.+.+++. |. +. ++..+-.++ .....+|++
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~-~Vi~~~~~~~~~~~~~~~----Ga-~~--~~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAY-PVIVSEPSDFRRELAKKV----GA-DY--VINPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-SEEEECSCHHHHHHHHHH----TC-SE--EECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHh----CC-CE--EECCCCcCHHHHHHHHcCCCCCCEE
Confidence 4566677765 44667777865 899999998766666542 33 21 232221121 122369999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|. ..| .++.+..+.+.|+++|.++=-
T Consensus 241 id-~~g-------~~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 241 LE-FSG-------APKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EE-CSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred EE-CCC-------CHHHHHHHHHHHhcCCEEEEE
Confidence 84 344 245778888999999987643
No 319
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=87.08 E-value=0.5 Score=49.29 Aligned_cols=143 Identities=20% Similarity=0.210 Sum_probs=75.6
Q ss_pred eeecccchhhhcccccCCCCCccccCcHHHHHHHhcCcccHHHHHHHHHHhhcc--cCCcCChhH----HHHHHH--H--
Q 039233 30 HIISDEFCTIEFSNYYLSFQPLMDNLEAQTYETFEKDSVKYIQYQRAIGNALVD--RVPDEEASS----LTTAAE--E-- 99 (359)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~~~d--~v~D~g~Gt----l~~~A~--~-- 99 (359)
+.++.+|+++||++..- | ..+..+|++-----+.|+. .-++ +|+|+|.|+ |+.+.+ +
T Consensus 18 ~~~s~~f~d~y~s~~~~--------~-~e~~~~f~~~~~l~~~~~~----~~~~~~~i~e~gfG~G~n~l~~~~~~~~~~ 84 (689)
T 3pvc_A 18 TPVSEQFGDIYFSNEDG--------L-EETHHVFLKGNGFPARFAS----HPQQSCIFAETGFGTGLNFLTLWRDFALFR 84 (689)
T ss_dssp -----------CCSTTS--------H-HHHHHHTTTTTTTTHHHHH----CCSSEEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCcccCCcccCCcCH--------H-HhhHhhccccCCHHHHHhh----CCCCceEEEEecCchHHHHHHHHHHHHHhh
Confidence 34788999999987531 2 2445566643221112210 0112 579999887 332221 1
Q ss_pred ------cCCCCeEEEEeCCHHHHHHHHHHHHh------------cCC------------CC---eEEEEeCccccc--cC
Q 039233 100 ------TGRKLKIYAVEKNPNAVVTLHSLVRL------------EGW------------EK---TVTIVSCDMRCW--DA 144 (359)
Q Consensus 100 ------aga~~~V~AVE~n~~a~~~a~~~~~~------------n~~------------~~---~V~vi~~d~~~~--~~ 144 (359)
...+.+++++|+.|...+.+++.... +.| .+ +++++.||+++. .+
T Consensus 85 ~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~ 164 (689)
T 3pvc_A 85 QQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTL 164 (689)
T ss_dssp HHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEEEEEETTTTEEEEEEESCHHHHGGGC
T ss_pred hhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCceEEEecCCcEEEEEEccCHHHHHhhc
Confidence 12246899999966444444432210 123 22 688999999884 22
Q ss_pred ----CCCccEEEeccccccC----CCCChHHHHHHHhhccCCCeEEEccccc
Q 039233 145 ----PEKADILVSELLGSFG----DNELSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 145 ----p~k~DiIVSEllGs~~----~~El~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
..++|.+. ++.|. .+.-.++++....++++|||++....+.
T Consensus 165 ~~~~~~~~da~f---lD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~ 213 (689)
T 3pvc_A 165 DDSLNNQVDAWF---LDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA 213 (689)
T ss_dssp CGGGTTCEEEEE---ECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC
T ss_pred ccccCCceeEEE---ECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 35799998 66665 2223577888888999999987665443
No 320
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=86.95 E-value=0.9 Score=43.52 Aligned_cols=87 Identities=15% Similarity=0.175 Sum_probs=55.2
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCc--ccccc------CCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCD--MRCWD------APEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d--~~~~~------~p~k~Di 150 (359)
++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++ .|... ++.-+ -.++. .+..+|+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~~~i~~~~~gg~D~ 266 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGAS-RIIGIDIDSKKYETAKK----FGVNE---FVNPKDHDKPIQEVIVDLTDGGVDY 266 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCS-CEEEECSCTTHHHHHHT----TTCCE---EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----cCCcE---EEccccCchhHHHHHHHhcCCCCCE
Confidence 4666678876 34667778877 99999999876665543 23322 23221 11110 1237999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCC-eEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQD-GISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~-Gi~IP~ 185 (359)
++ |..| .++.+..+.+.|+++ |+++=-
T Consensus 267 vi-d~~g-------~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 267 SF-ECIG-------NVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp EE-ECSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred EE-ECCC-------CHHHHHHHHHHhhccCCEEEEE
Confidence 98 3444 356888889999996 987643
No 321
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=86.74 E-value=1.1 Score=42.71 Aligned_cols=87 Identities=13% Similarity=0.060 Sum_probs=55.2
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc--cccc------CCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM--RCWD------APEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~--~~~~------~p~k~Di 150 (359)
++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++ .|... ++..+- .++. ....+|+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~~~i~~~t~gg~Dv 264 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAGAS-RIIGVGTHKDKFPKAIE----LGATE---CLNPKDYDKPIYEVICEKTNGGVDY 264 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHHH----TTCSE---EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHHHH----cCCcE---EEecccccchHHHHHHHHhCCCCCE
Confidence 4677778876 34667778876 89999999876666553 33322 232211 1110 1237999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCC-eEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQD-GISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~-Gi~IP~ 185 (359)
|+ |..| .++.+..+.+.|+++ |.++--
T Consensus 265 vi-d~~g-------~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 265 AV-ECAG-------RIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp EE-ECSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred EE-ECCC-------CHHHHHHHHHHHhcCCCEEEEE
Confidence 98 3444 255788888999999 987643
No 322
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=86.69 E-value=0.83 Score=43.93 Aligned_cols=87 Identities=16% Similarity=0.189 Sum_probs=54.0
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCc----------cccccCCCCc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCD----------MRCWDAPEKA 148 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d----------~~~~~~p~k~ 148 (359)
++|+-.|+|. ...+|+..|+. +|++++.+++-.+.|++ .|. + .++..+ ++++.....+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~~~~----lGa-~--~vi~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAE-NVIVIAGSPNRLKLAEE----IGA-D--LTLNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBS-EEEEEESCHHHHHHHHH----TTC-S--EEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCc-eEEEEcCCHHHHHHHHH----cCC-c--EEEeccccCcchHHHHHHHHhCCCCC
Confidence 4677777765 34666667755 99999999876666553 333 2 223322 1112222369
Q ss_pred cEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 149 DILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 149 DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|+|+ |..|. ++.+..+.+.|+++|.++=-
T Consensus 269 Dvvi-d~~g~-------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 269 DFIL-EATGD-------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EEEE-ECSSC-------TTHHHHHHHHEEEEEEEEEC
T ss_pred cEEE-ECCCC-------HHHHHHHHHHHhcCCEEEEE
Confidence 9998 34442 34677788899999997643
No 323
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=86.48 E-value=0.5 Score=43.83 Aligned_cols=70 Identities=13% Similarity=0.061 Sum_probs=44.9
Q ss_pred CCeEEEEeCcccccc-------CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccceeeeeccchhhhh
Q 039233 129 EKTVTIVSCDMRCWD-------APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLHN 201 (359)
Q Consensus 129 ~~~V~vi~~d~~~~~-------~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~~ 201 (359)
.++|+++.|+..+.- ..+++|++. ++.-. -+-..++|......|+|||++|=..+...--| ...+.++
T Consensus 157 ~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~---ID~D~-Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~w~-G~~~A~~ 231 (257)
T 3tos_A 157 TQRSVLVEGDVRETVPRYLAENPQTVIALAY---FDLDL-YEPTKAVLEAIRPYLTKGSIVAFDELDNPKWP-GENIAMR 231 (257)
T ss_dssp CCSEEEEESCHHHHHHHHHHHCTTCCEEEEE---ECCCC-HHHHHHHHHHHGGGEEEEEEEEESSTTCTTCT-HHHHHHH
T ss_pred CCcEEEEEecHHHHHHHHHHhCCCCceEEEE---EcCcc-cchHHHHHHHHHHHhCCCcEEEEcCCCCCCCh-HHHHHHH
Confidence 478999999998841 224689988 43311 11133467777888999999998887431122 4445555
Q ss_pred hh
Q 039233 202 DV 203 (359)
Q Consensus 202 ~~ 203 (359)
+.
T Consensus 232 ef 233 (257)
T 3tos_A 232 KV 233 (257)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 324
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=85.96 E-value=0.32 Score=47.27 Aligned_cols=90 Identities=11% Similarity=0.073 Sum_probs=53.3
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-------ccCCCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-------WDAPEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-------~~~p~k~DiI 151 (359)
++|+=.|+|. ...+|+..|++ +|++++.++.-.+.|++. |. + .++..+-.+ +.....+|++
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~~~~l----Ga-~--~vi~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGAS-KVILSEPSEVRRNLAKEL----GA-D--HVIDPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHHHHH----TC-S--EEECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHc----CC-C--EEEcCCCCCHHHHHHHHhCCCCCCEE
Confidence 3566667765 34667778876 999999999777666543 32 2 233322122 1223469999
Q ss_pred EeccccccCCCCChHHHHHHHhhcc----CCCeEEEcccc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFL----KQDGISIPSSY 187 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~L----kp~Gi~IP~~~ 187 (359)
+ |..|. ....+..+.+.| +++|.++=-..
T Consensus 287 i-d~~g~------~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 287 L-EATGV------PQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp E-ECSSC------HHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred E-ECCCC------cHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 8 34553 112444444555 99999775443
No 325
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=85.75 E-value=1.4 Score=42.10 Aligned_cols=86 Identities=14% Similarity=0.176 Sum_probs=54.0
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc--cccc------CCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM--RCWD------APEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~--~~~~------~p~k~Di 150 (359)
++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++ .|... ++..+- .++. ....+|+
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~~~~~~~~~~g~D~ 264 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAGAA-RIIGVDINKDKFAKAKE----VGATE---CVNPQDYKKPIQEVLTEMSNGGVDF 264 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTCSE---EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCCce---EecccccchhHHHHHHHHhCCCCcE
Confidence 4677678765 44667778876 89999999876666543 23322 232110 1110 1236999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCC-eEEEc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQD-GISIP 184 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~-Gi~IP 184 (359)
|+ |..| .++.+..+.+.|+++ |.++=
T Consensus 265 vi-d~~g-------~~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 265 SF-EVIG-------RLDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp EE-ECSC-------CHHHHHHHHHHBCTTTCEEEE
T ss_pred EE-ECCC-------CHHHHHHHHHHhhcCCcEEEE
Confidence 98 3444 245788888999999 98763
No 326
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.68 E-value=1.3 Score=42.42 Aligned_cols=87 Identities=11% Similarity=0.074 Sum_probs=54.6
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc--cccc------CCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM--RCWD------APEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~--~~~~------~p~k~Di 150 (359)
++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++ .|... ++..+- .++. ....+|+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~~~v~~~~~~g~Dv 268 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAGAS-RIIAIDINGEKFPKAKA----LGATD---CLNPRELDKPVQDVITELTAGGVDY 268 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTCSE---EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCCcE---EEccccccchHHHHHHHHhCCCccE
Confidence 4677778775 34667778876 89999999876666543 23322 222110 1110 1137999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCC-eEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQD-GISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~-Gi~IP~ 185 (359)
|+ |..| .++.+..+.+.|+++ |.++--
T Consensus 269 vi-d~~G-------~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 269 SL-DCAG-------TAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp EE-ESSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred EE-ECCC-------CHHHHHHHHHHhhcCCCEEEEE
Confidence 98 3444 255788888999999 987643
No 327
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=85.46 E-value=1.3 Score=42.16 Aligned_cols=87 Identities=16% Similarity=0.162 Sum_probs=54.5
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc--cccc------CCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM--RCWD------APEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~--~~~~------~p~k~Di 150 (359)
++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++ .|... ++..+- .++. ....+|+
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~~~~~~~~~~g~D~ 265 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAGAK-RIIAVDLNPDKFEKAKV----FGATD---FVNPNDHSEPISQVLSKMTNGGVDF 265 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTCCE---EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHHH----hCCce---EEeccccchhHHHHHHHHhCCCCCE
Confidence 4677678765 34667778876 89999999876666553 23322 232111 1110 1136999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCC-eEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQD-GISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~-Gi~IP~ 185 (359)
+|- ..| .++.+..+.+.|+++ |.++--
T Consensus 266 vid-~~g-------~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 266 SLE-CVG-------NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp EEE-CSC-------CHHHHHHHHHTBCTTTCEEEEC
T ss_pred EEE-CCC-------CHHHHHHHHHHhhcCCcEEEEE
Confidence 983 444 245788888999999 987643
No 328
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=85.28 E-value=1.1 Score=42.56 Aligned_cols=139 Identities=16% Similarity=0.120 Sum_probs=78.6
Q ss_pred ceeecccchhhhcccccCCCCCccccCcHHHHHHHhcCcccHHHHHHHHHHhhcc-cCCcCChhH-H----H-HHHHHcC
Q 039233 29 FHIISDEFCTIEFSNYYLSFQPLMDNLEAQTYETFEKDSVKYIQYQRAIGNALVD-RVPDEEASS-L----T-TAAEETG 101 (359)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~~~d-~v~D~g~Gt-l----~-~~A~~ag 101 (359)
.|+++.+|+++|||+. +---..+..+|++- +...+++ +.-.. +|+|+|-|| | + ..+.+.+
T Consensus 56 ~Tl~s~~f~e~YhS~~--------~GAl~Es~hVFi~~---~~L~~r~--~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~ 122 (308)
T 3vyw_A 56 KTLIHKTYGEPYHSQT--------AGAIRESLYKFVRP---SRILEKA--KERKVIRILDVGFGLGYNLAVALKHLWEVN 122 (308)
T ss_dssp EEEEETTTTEESSCTT--------TCHHHHHHHHTHHH---HTHHHHH--HHCSEEEEEEECCTTSHHHHHHHHHHHHHC
T ss_pred cCcccCccCCccCCCC--------CcHHHHHHHHHhcc---CCchHHh--cCCCCcEEEEeCCCccHHHHHHHHHHHHhC
Confidence 3678999999999852 11012445566541 1111111 01111 489998887 2 2 2233444
Q ss_pred CC--CeEEEEeCCHH---------HHHHHHHHHHhcC-C-CC--eEEEEeCccccc--cCC-CCccEEEeccccccCC--
Q 039233 102 RK--LKIYAVEKNPN---------AVVTLHSLVRLEG-W-EK--TVTIVSCDMRCW--DAP-EKADILVSELLGSFGD-- 161 (359)
Q Consensus 102 a~--~~V~AVE~n~~---------a~~~a~~~~~~n~-~-~~--~V~vi~~d~~~~--~~p-~k~DiIVSEllGs~~~-- 161 (359)
.+ .+.+++|+.+. .....+....... + ++ .++++.||+++. +++ .++|+|. ++.|..
T Consensus 123 ~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~~l~~l~~~~~Da~f---lDgFsP~k 199 (308)
T 3vyw_A 123 PKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARKRIKEVENFKADAVF---HDAFSPYK 199 (308)
T ss_dssp TTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHHHGGGCCSCCEEEEE---ECCSCTTT
T ss_pred CCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHHHHhhhcccceeEEE---eCCCCccc
Confidence 33 45688897431 1122222222211 1 12 456899999884 233 3799998 677762
Q ss_pred -CCC-hHHHHHHHhhccCCCeEEE
Q 039233 162 -NEL-SPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 162 -~El-~~e~L~~a~r~Lkp~Gi~I 183 (359)
-|+ .++++....+.++|||++.
T Consensus 200 NPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 200 NPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp SGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred CcccCCHHHHHHHHHHhCCCcEEE
Confidence 232 4778999999999999986
No 329
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=84.93 E-value=0.085 Score=50.09 Aligned_cols=85 Identities=13% Similarity=0.103 Sum_probs=53.2
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-------ccCCCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-------WDAPEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-------~~~p~k~DiI 151 (359)
++|+-.|+|. ...+|+..|++ +|++++.+++-.+.+++. .+. ++..+-.+ +. ...+|++
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~Ga~-~Vi~~~~~~~~~~~~~~l------a~~--v~~~~~~~~~~~~~~~~-~~g~D~v 235 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASGAG-PILVSDPNPYRLAFARPY------ADR--LVNPLEEDLLEVVRRVT-GSGVEVL 235 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCC-SEEEECSCHHHHGGGTTT------CSE--EECTTTSCHHHHHHHHH-SSCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHh------HHh--ccCcCccCHHHHHHHhc-CCCCCEE
Confidence 4677677665 44667778865 899999998655554432 222 23221111 12 3468999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|- ..| .++.+..+.+.|+++|.++=-
T Consensus 236 id-~~g-------~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 236 LE-FSG-------NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EE-CSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred EE-CCC-------CHHHHHHHHHHHhcCCEEEEE
Confidence 83 444 245778888899999987643
No 330
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.85 E-value=0.87 Score=43.06 Aligned_cols=83 Identities=16% Similarity=0.119 Sum_probs=53.3
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs 158 (359)
++|+-.|+|. ...+|+..|+ +|++++.++.-.+.|++ .|... + + .+...+ .+.+|+|+- ..|.
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~----lGa~~-v--~-~~~~~~--~~~~D~vid-~~g~ 244 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGA--EVSVFARNEHKKQDALS----MGVKH-F--Y-TDPKQC--KEELDFIIS-TIPT 244 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC--EEEEECSSSTTHHHHHH----TTCSE-E--E-SSGGGC--CSCEEEEEE-CCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHh----cCCCe-e--c-CCHHHH--hcCCCEEEE-CCCc
Confidence 4677678876 3456666774 89999999876665543 34322 2 2 444333 238999983 4442
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
++.+..+.+.|+++|.++=-
T Consensus 245 -------~~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 245 -------HYDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp -------CCCHHHHHTTEEEEEEEEEC
T ss_pred -------HHHHHHHHHHHhcCCEEEEE
Confidence 12566778899999997644
No 331
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.71 E-value=1.3 Score=41.62 Aligned_cols=88 Identities=14% Similarity=0.154 Sum_probs=54.6
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc------ccccCCCCccEEE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM------RCWDAPEKADILV 152 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~------~~~~~p~k~DiIV 152 (359)
++|+-.|+|. ...+|+..|.. +|++++.++.-.+.|++ .|... ++..+- +++.....+|+++
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~-~Vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~v~~~t~g~g~d~v~ 244 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAA-RVIAVDLDDDRLALARE----VGADA---AVKSGAGAADAIRELTGGQGATAVF 244 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESCHHHHHHHHH----TTCSE---EEECSTTHHHHHHHHHGGGCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHHH----cCCCE---EEcCCCcHHHHHHHHhCCCCCeEEE
Confidence 4566667765 34556666555 99999999976666654 33322 222211 1111224799988
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
|..| .++.+..+.+.|+++|.++--.
T Consensus 245 -d~~G-------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 245 -DFVG-------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp -ESSC-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred -ECCC-------CHHHHHHHHHHHhcCCEEEEEC
Confidence 3444 3457888889999999976443
No 332
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.64 E-value=1.7 Score=41.27 Aligned_cols=55 Identities=11% Similarity=0.092 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhhc--ccCCcC--ChhHHHHHHHHcCCCCeEEEEeCCH---HHHHHHHHHHHhc
Q 039233 70 YIQYQRAIGNALV--DRVPDE--EASSLTTAAEETGRKLKIYAVEKNP---NAVVTLHSLVRLE 126 (359)
Q Consensus 70 y~~Y~~AI~~~~~--d~v~D~--g~Gtl~~~A~~aga~~~V~AVE~n~---~a~~~a~~~~~~n 126 (359)
...-++.|...-. |.|||- |+||...+|.+.| + +.++||+++ ..++.++++++..
T Consensus 229 ~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~-r-~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 229 AAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEG-R-NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHT-C-EEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcC-C-cEEEEECCccHHHHHHHHHHHHHHc
Confidence 3444555554432 578987 5666888899998 3 899999999 9999999988754
No 333
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=84.50 E-value=1.3 Score=42.11 Aligned_cols=86 Identities=13% Similarity=0.171 Sum_probs=54.6
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc--cccc------CCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM--RCWD------APEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~--~~~~------~p~k~Di 150 (359)
++|+-.|+|. ...+|+..|++ +|++++.++.-.+.|++. |... ++..+- .++. ....+|+
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~Ga~-~Vi~~~~~~~~~~~~~~l----Ga~~---vi~~~~~~~~~~~~v~~~~~~g~D~ 263 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAGAS-RIIGVDINKDKFARAKEF----GATE---CINPQDFSKPIQEVLIEMTDGGVDY 263 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHHHH----TCSE---EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHc----CCce---EeccccccccHHHHHHHHhCCCCCE
Confidence 4677678775 34667778876 899999998777666542 3322 222110 1110 1236999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCC-eEEEc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQD-GISIP 184 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~-Gi~IP 184 (359)
++ |..| .++.+..+.+.|+++ |.++=
T Consensus 264 vi-d~~g-------~~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 264 SF-ECIG-------NVKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp EE-ECSC-------CHHHHHHHHHTBCTTTCEEEE
T ss_pred EE-ECCC-------cHHHHHHHHHhhccCCcEEEE
Confidence 98 3444 245788888999999 98763
No 334
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=83.08 E-value=2.4 Score=40.01 Aligned_cols=116 Identities=14% Similarity=0.156 Sum_probs=64.9
Q ss_pred CCccccCcHHHHHHHhcCcccHHHHHHHHHHh-hc--ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 039233 49 QPLMDNLEAQTYETFEKDSVKYIQYQRAIGNA-LV--DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHS 121 (359)
Q Consensus 49 qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~-~~--d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~ 121 (359)
-|+-++++...-- +. .+. -.+|. |+..+ ++ ++|+-.|+|. ...+|+..|+ +|++++.++.-.+.+++
T Consensus 137 ~~iP~~~~~~~aa-~~-~~~-~ta~~-al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 137 HKLPDNVSLEEGA-LL-EPL-SVGVH-ACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA--FVVCTARSPRRLEVAKN 210 (352)
T ss_dssp EECCTTSCHHHHH-TH-HHH-HHHHH-HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred EECcCCCCHHHHH-hh-chH-HHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHH
Confidence 5666777654322 22 111 12443 33322 22 4677778775 3456666774 69999999876666553
Q ss_pred HHHhcCCCCeEEEEeCcc-ccc-------cC---CCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 122 LVRLEGWEKTVTIVSCDM-RCW-------DA---PEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 122 ~~~~n~~~~~V~vi~~d~-~~~-------~~---p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.|.. .++..+- .++ .. ...+|+++- ..| .++.+..+.+.|+++|.++=-
T Consensus 211 ----lGa~---~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid-~~g-------~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 211 ----CGAD---VTLVVDPAKEEESSIIERIRSAIGDLPNVTID-CSG-------NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp ----TTCS---EEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE-CSC-------CHHHHHHHHHHSCTTCEEEEC
T ss_pred ----hCCC---EEEcCcccccHHHHHHHHhccccCCCCCEEEE-CCC-------CHHHHHHHHHHHhcCCEEEEE
Confidence 2332 2232211 111 11 246999983 344 244677888999999997643
No 335
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.86 E-value=3.5 Score=38.55 Aligned_cols=135 Identities=13% Similarity=0.051 Sum_probs=71.8
Q ss_pred CCccccCcHHHHHHHhcCcccHHHHHHHHHHh-hc--ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 039233 49 QPLMDNLEAQTYETFEKDSVKYIQYQRAIGNA-LV--DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHS 121 (359)
Q Consensus 49 qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~-~~--d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~ 121 (359)
-|+-|+++...-..+. . .-..+| .++..+ ++ ++|+=.|+|. ...+|+++|.. +|+|++.+++-.+.+++
T Consensus 131 ~~iP~~~~~~~aa~l~-~-~~~ta~-~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~-~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 131 VKVPDGLDPIEASSIT-C-AGVTTY-KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA-KVIAVDINQDKLNLAKK 206 (348)
T ss_dssp CBCCTTSCHHHHHHHH-H-HHHHHH-HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCC-EEEEEESCHHHHHHHHH
T ss_pred eecCCCCCHHHHhhcc-c-ceeeEE-eeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCC-EEEEEECcHHHhhhhhh
Confidence 5677777665443332 1 112233 344433 22 4676678876 33555666655 99999999975554443
Q ss_pred HHHhcCCCCeEEEEeCcc----ccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccceeeeeccch
Q 039233 122 LVRLEGWEKTVTIVSCDM----RCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPVTAS 197 (359)
Q Consensus 122 ~~~~n~~~~~V~vi~~d~----~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~ 197 (359)
.|-...|..-..|. +++.....+|+++- ..| .++.+..+.+.|+++|.++-.....--.++...
T Consensus 207 ----~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~-~~~-------~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 274 (348)
T 4eez_A 207 ----IGADVTINSGDVNPVDEIKKITGGLGVQSAIV-CAV-------ARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVP 274 (348)
T ss_dssp ----TTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEE-CCS-------CHHHHHHHHHTEEEEEEEEECCCCSCEEEECHH
T ss_pred ----cCCeEEEeCCCCCHHHHhhhhcCCCCceEEEE-ecc-------CcchhheeheeecCCceEEEEeccCCCCccCHH
Confidence 23322111111111 11222345676663 222 356788888999999997765544434444444
Q ss_pred hh
Q 039233 198 KL 199 (359)
Q Consensus 198 ~l 199 (359)
.+
T Consensus 275 ~~ 276 (348)
T 4eez_A 275 TV 276 (348)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 336
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=81.84 E-value=0.93 Score=45.72 Aligned_cols=55 Identities=18% Similarity=0.146 Sum_probs=40.2
Q ss_pred CCcC--ChhHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc
Q 039233 85 VPDE--EASSLTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD 143 (359)
Q Consensus 85 v~D~--g~Gtl~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~ 143 (359)
++|+ |+|-++....++|.+ .|+|+|.++.|+.+.+.|... .....++++|++++.
T Consensus 91 viDLFaG~GGlslG~~~aG~~-~v~avE~d~~A~~ty~~N~~~---~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 91 FIDLFAGIGGIRRGFESIGGQ-CVFTSEWNKHAVRTYKANHYC---DPATHHFNEDIRDIT 147 (482)
T ss_dssp EEEESCTTSHHHHHHHTTTEE-EEEEECCCHHHHHHHHHHSCC---CTTTCEEESCTHHHH
T ss_pred EEEecCCccHHHHHHHHCCCE-EEEEEeCCHHHHHHHHHhccc---CCCcceeccchhhhh
Confidence 5666 555588888889976 699999999988887766421 112456789999875
No 337
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=81.53 E-value=3.7 Score=38.32 Aligned_cols=86 Identities=14% Similarity=0.084 Sum_probs=54.1
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~DiI 151 (359)
++|+=.|+|. ..++|+.+|++ .|++++.+++-.+.|++ .|-.. ++..+-.+. .....+|+|
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G~~-~vi~~~~~~~k~~~a~~----lGa~~---~i~~~~~~~~~~~~~~~~~~g~d~v 233 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALGAK-SVTAIDISSEKLALAKS----FGAMQ---TFNSSEMSAPQMQSVLRELRFNQLI 233 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHH----TTCSE---EEETTTSCHHHHHHHHGGGCSSEEE
T ss_pred CEEEEECCCCcchHHHHHHHHcCCc-EEEEEechHHHHHHHHH----cCCeE---EEeCCCCCHHHHHHhhcccCCcccc
Confidence 4666678775 34677788887 89999999976666554 23322 222221111 112346776
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+ |..| .++.++.+.+.|+++|.++=
T Consensus 234 ~-d~~G-------~~~~~~~~~~~l~~~G~~v~ 258 (346)
T 4a2c_A 234 L-ETAG-------VPQTVELAVEIAGPHAQLAL 258 (346)
T ss_dssp E-ECSC-------SHHHHHHHHHHCCTTCEEEE
T ss_pred c-cccc-------ccchhhhhhheecCCeEEEE
Confidence 6 3444 46688888899999998763
No 338
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=80.74 E-value=0.74 Score=43.35 Aligned_cols=87 Identities=15% Similarity=0.061 Sum_probs=54.0
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccEEEe
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADILVS 153 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIVS 153 (359)
++|+-.|+|. ...+|+..|+ +|++++.+++-.+.+++ .|... ++..+-.++. ....+|+++-
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~~~~~~~g~~d~vid 238 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGL--RVAAVDIDDAKLNLARR----LGAEV---AVNARDTDPAAWLQKEIGGAHGVLV 238 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH----TTCSE---EEETTTSCHHHHHHHHHSSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHH----cCCCE---EEeCCCcCHHHHHHHhCCCCCEEEE
Confidence 4566678765 4466777774 89999999976666544 33222 2322212210 1126888873
Q ss_pred ccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 154 ELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 154 EllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
..| .++.+..+.+.|+++|.++=-.
T Consensus 239 -~~g-------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 239 -TAV-------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp -SSC-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred -eCC-------CHHHHHHHHHHhccCCEEEEeC
Confidence 222 4568888899999999976543
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=79.43 E-value=0.89 Score=43.63 Aligned_cols=86 Identities=16% Similarity=0.165 Sum_probs=52.0
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc--cCCCCccEEEeccc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW--DAPEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~--~~p~k~DiIVSEll 156 (359)
++|+-.|+|. ...+|+..|+ +|++++.+++-.+.|++ .|... ++..+-.++ .....+|+|+ |..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga--~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~~~~g~Dvvi-d~~ 265 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGA--HVVAFTTSEAKREAAKA----LGADE---VVNSRNADEMAAHLKSFDFIL-NTV 265 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----HTCSE---EEETTCHHHHHTTTTCEEEEE-ECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH----cCCcE---EeccccHHHHHHhhcCCCEEE-ECC
Confidence 4677778775 3456666774 79999999877766654 23222 232211111 1125799998 344
Q ss_pred cccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 157 GSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 157 Gs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|. ++.+..+.+.|+++|.++--
T Consensus 266 g~-------~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 266 AA-------PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp SS-------CCCHHHHHTTEEEEEEEEEC
T ss_pred CC-------HHHHHHHHHHhccCCEEEEe
Confidence 43 22456677899999987643
No 340
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=79.42 E-value=4.4 Score=38.55 Aligned_cols=84 Identities=10% Similarity=0.080 Sum_probs=49.8
Q ss_pred cCCcCC-hhH---H-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC------ccccccCCCCccEEE
Q 039233 84 RVPDEE-ASS---L-TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC------DMRCWDAPEKADILV 152 (359)
Q Consensus 84 ~v~D~g-~Gt---l-~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~------d~~~~~~p~k~DiIV 152 (359)
+|+=.| +|. + ..+|+..+.. +|++++.+++-.+.|++ .|. +. ++.. .++++ ....+|+++
T Consensus 174 ~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~----lGa-d~--vi~~~~~~~~~v~~~-~~~g~Dvvi 244 (363)
T 4dvj_A 174 AILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKS----LGA-HH--VIDHSKPLAAEVAAL-GLGAPAFVF 244 (363)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHH----TTC-SE--EECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHH----cCC-CE--EEeCCCCHHHHHHHh-cCCCceEEE
Confidence 455555 554 2 3444433434 99999999876666554 333 21 2221 11222 235789887
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
- ..| .++.+..+.+.|+++|.++=
T Consensus 245 d-~~g-------~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 245 S-TTH-------TDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp E-CSC-------HHHHHHHHHHHSCTTCEEEE
T ss_pred E-CCC-------chhhHHHHHHHhcCCCEEEE
Confidence 3 333 45578888899999999763
No 341
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=77.73 E-value=2.9 Score=40.44 Aligned_cols=82 Identities=11% Similarity=0.069 Sum_probs=49.3
Q ss_pred CCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc----cCCCCccEEEecc----cccc----CCCCC-----
Q 039233 102 RKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW----DAPEKADILVSEL----LGSF----GDNEL----- 164 (359)
Q Consensus 102 a~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~----~~p~k~DiIVSEl----lGs~----~~~El----- 164 (359)
..+.|+.-|.-.|...++-+.+....-..+-.++.|.-..+ -+...+|+++|.. +... .+|..
T Consensus 90 pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~ 169 (359)
T 1m6e_X 90 PEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMA 169 (359)
T ss_dssp CEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSC
T ss_pred CceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEec
Confidence 35789999998888888877664311001234444444432 2456899999853 3221 11110
Q ss_pred ------------------hHHHHHHHhhccCCCeEEE
Q 039233 165 ------------------SPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 165 ------------------~~e~L~~a~r~Lkp~Gi~I 183 (359)
....|..+.+-|+|||+++
T Consensus 170 ~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mv 206 (359)
T 1m6e_X 170 NTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMV 206 (359)
T ss_dssp SSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 1123888899999999975
No 342
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=77.50 E-value=3.7 Score=33.35 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=42.8
Q ss_pred cccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccEEE
Q 039233 82 VDRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADILV 152 (359)
Q Consensus 82 ~d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIV 152 (359)
+++++=+|+|. ++....+.| ..|+++|.|++.++.+++ . .+.++.+|..+.+ ..+++|++|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 44566778886 445555566 589999999987665543 1 2678999987743 135799988
Q ss_pred e
Q 039233 153 S 153 (359)
Q Consensus 153 S 153 (359)
.
T Consensus 77 ~ 77 (140)
T 3fwz_A 77 L 77 (140)
T ss_dssp E
T ss_pred E
Confidence 5
No 343
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=77.08 E-value=2.3 Score=40.29 Aligned_cols=87 Identities=13% Similarity=0.113 Sum_probs=52.0
Q ss_pred ccCCcCChhH----H-HHHH-HHcCCCCeEEEEeCCHH---HHHHHHHHHHhcCCCCeEEEEe-Cc---cccccCCCCcc
Q 039233 83 DRVPDEEASS----L-TTAA-EETGRKLKIYAVEKNPN---AVVTLHSLVRLEGWEKTVTIVS-CD---MRCWDAPEKAD 149 (359)
Q Consensus 83 d~v~D~g~Gt----l-~~~A-~~aga~~~V~AVE~n~~---a~~~a~~~~~~n~~~~~V~vi~-~d---~~~~~~p~k~D 149 (359)
++|+-.|+|. . ..+| +..|++ +|+|++.+++ -.+.|++ .|. +.+ -.. .| ++++ ...+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~-~Vi~~~~~~~~~~~~~~~~~----lGa-~~v-~~~~~~~~~i~~~--~gg~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYE-NLYCLGRRDRPDPTIDIIEE----LDA-TYV-DSRQTPVEDVPDV--YEQMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCC-EEEEEECCCSSCHHHHHHHH----TTC-EEE-ETTTSCGGGHHHH--SCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCc-EEEEEeCCcccHHHHHHHHH----cCC-ccc-CCCccCHHHHHHh--CCCCC
Confidence 5677777765 3 4555 566765 6999999886 5555543 232 212 100 11 1112 12689
Q ss_pred EEEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 150 ILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 150 iIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+|+ |..| .++.+..+.+.|+++|+++--.
T Consensus 245 vvi-d~~g-------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 245 FIY-EATG-------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEE-ECSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EEE-ECCC-------ChHHHHHHHHHHhcCCEEEEEe
Confidence 988 3444 2446778889999999976443
No 344
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=77.06 E-value=1.7 Score=40.87 Aligned_cols=86 Identities=15% Similarity=0.112 Sum_probs=53.8
Q ss_pred ccCCcCChhH----HHHHHHHc--CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC----c-cccccCCCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEET--GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC----D-MRCWDAPEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~a--ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~----d-~~~~~~p~k~DiI 151 (359)
++|+-.|+|. ...+|+.. |+ +|++++.+++-.+.|++. |. +. ++.. | +.++.....+|+|
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga--~Vi~~~~~~~~~~~~~~l----Ga-~~--vi~~~~~~~~~~~~~~g~g~D~v 242 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNI--TIVGISRSKKHRDFALEL----GA-DY--VSEMKDAESLINKLTDGLGASIA 242 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHH----TC-SE--EECHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHh----CC-CE--EeccccchHHHHHhhcCCCccEE
Confidence 5677777765 34566666 74 799999998776666542 32 21 2221 1 1222223479999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+- ..|. ++.+..+.+.|+++|.++--
T Consensus 243 id-~~g~-------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 243 ID-LVGT-------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EE-SSCC-------HHHHHHHHHHEEEEEEEEEC
T ss_pred EE-CCCC-------hHHHHHHHHHhhcCCEEEEe
Confidence 83 4442 44777888999999987643
No 345
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=76.46 E-value=0.85 Score=43.14 Aligned_cols=83 Identities=12% Similarity=0.142 Sum_probs=51.8
Q ss_pred ccCCcC-ChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCc------cccccCCCCccEE
Q 039233 83 DRVPDE-EASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCD------MRCWDAPEKADIL 151 (359)
Q Consensus 83 d~v~D~-g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d------~~~~~~p~k~DiI 151 (359)
++|+=. |+|. ...+|+..|+ +|++++.++.-.+.+++. |. +. ++..+ +++. ....+|++
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~l----Ga-~~--vi~~~~~~~~~~~~~-~~~g~Dvv 221 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYGL--RVITTASRNETIEWTKKM----GA-DI--VLNHKESLLNQFKTQ-GIELVDYV 221 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC--EEEEECCSHHHHHHHHHH----TC-SE--EECTTSCHHHHHHHH-TCCCEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHhc----CC-cE--EEECCccHHHHHHHh-CCCCccEE
Confidence 455555 5655 3466667774 899999998777666652 32 21 22221 1112 23479998
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
+- ..| .++.+..+.+.|+++|.++
T Consensus 222 ~d-~~g-------~~~~~~~~~~~l~~~G~iv 245 (346)
T 3fbg_A 222 FC-TFN-------TDMYYDDMIQLVKPRGHIA 245 (346)
T ss_dssp EE-SSC-------HHHHHHHHHHHEEEEEEEE
T ss_pred EE-CCC-------chHHHHHHHHHhccCCEEE
Confidence 83 333 3557788889999999975
No 346
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=75.70 E-value=1.7 Score=41.00 Aligned_cols=86 Identities=19% Similarity=0.174 Sum_probs=51.5
Q ss_pred ccCCcCChh-H----HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCc------cccccCCCCccE
Q 039233 83 DRVPDEEAS-S----LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCD------MRCWDAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~G-t----l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d------~~~~~~p~k~Di 150 (359)
++|+-.|+| . +..+|+.. |+ +|++++.++...+.+++. |. + ..+-..+ +.++.....+|+
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~~~~~~~~~~~~----g~-~-~~~~~~~~~~~~~~~~~~~~~~~d~ 243 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVREEAVEAAKRA----GA-D-YVINASMQDPLAEIRRITESKGVDA 243 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSHHHHHHHHHH----TC-S-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHh----CC-C-EEecCCCccHHHHHHHHhcCCCceE
Confidence 457777776 2 44666666 74 899999998777666542 32 2 1121122 111111147899
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+|. ..| .++.+..+.+.|+++|.++-
T Consensus 244 vi~-~~g-------~~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 244 VID-LNN-------SEKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp EEE-SCC-------CHHHHTTGGGGEEEEEEEEE
T ss_pred EEE-CCC-------CHHHHHHHHHHHhcCCEEEE
Confidence 984 333 24467777889999998764
No 347
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=75.49 E-value=0.65 Score=43.49 Aligned_cols=87 Identities=11% Similarity=0.113 Sum_probs=53.3
Q ss_pred ccCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.| +|. ...+|+..|+ +|++++.+++-.+.+++. |- + .++..+-.++ .....+|+
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~~----Ga-~--~~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALGA--KLIGTVSSPEKAAHAKAL----GA-W--ETIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH----TC-S--EEEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc----CC-C--EEEeCCCccHHHHHHHHhCCCCceE
Confidence 4566667 554 4466667774 899999998776666542 32 2 1222221221 12247999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEcccc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
++- ..|. +.+..+.+.|+++|.++--..
T Consensus 213 vid-~~g~--------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 213 VYD-GVGQ--------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEE-SSCG--------GGHHHHHTTEEEEEEEEECCC
T ss_pred EEE-CCCh--------HHHHHHHHHhcCCCEEEEEec
Confidence 884 3442 367778889999999775543
No 348
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=75.16 E-value=2.1 Score=40.67 Aligned_cols=84 Identities=18% Similarity=0.221 Sum_probs=51.8
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~DiI 151 (359)
++|+-.|+|. ...+|+..|+ +|++++.++.-.+.|++. |... ++..+-.++ .....+|+|
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~l----Ga~~---vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATGA--EVIVTSSSREKLDRAFAL----GADH---GINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH----TCSE---EEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--EEEEEecCchhHHHHHHc----CCCE---EEcCCcccHHHHHHHHhCCCCceEE
Confidence 4677778776 3456666774 899999998766665542 3322 233221221 223479998
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+- ..| . +.+..+.+.|+++|.++=
T Consensus 262 id-~~g----~----~~~~~~~~~l~~~G~iv~ 285 (363)
T 3uog_A 262 LE-IAG----G----AGLGQSLKAVAPDGRISV 285 (363)
T ss_dssp EE-ETT----S----SCHHHHHHHEEEEEEEEE
T ss_pred EE-CCC----h----HHHHHHHHHhhcCCEEEE
Confidence 83 444 1 245667788999998763
No 349
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=74.40 E-value=0.61 Score=44.15 Aligned_cols=85 Identities=22% Similarity=0.317 Sum_probs=51.7
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.|+ |. ...+|+..|+ +|++++.++.-.+.+++. |. +. ++..+ .++ .....+|+
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~~----ga-~~--v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGA--KVIAVVNRTAATEFVKSV----GA-DI--VLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHH----TC-SE--EEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHhc----CC-cE--EecCc-hhHHHHHHHHhCCCCceE
Confidence 45777776 44 4466677774 899999988766666552 32 21 23333 222 12246999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
++- ..|. +.+..+.+.|+++|.++=-.
T Consensus 231 vid-~~g~--------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 231 VVD-PIGG--------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEE-SCC----------CHHHHHHTEEEEEEEEEC-
T ss_pred EEE-CCch--------hHHHHHHHhhcCCCEEEEEE
Confidence 984 4442 14667778999999876443
No 350
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=74.38 E-value=0.46 Score=44.83 Aligned_cols=86 Identities=16% Similarity=0.168 Sum_probs=50.3
Q ss_pred ccCCcCChhH-----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEEASS-----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt-----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.|+|+ ...+|+..|+ +|++++.++.-.+.+++. |... ++..+-.++ .....+|+
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~l----ga~~---~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILNF--RLIAVTRNNKHTEELLRL----GAAY---VIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHH----TCSE---EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHhC----CCcE---EEeCCcccHHHHHHHHhCCCCCcE
Confidence 4677777652 3466667774 899999988766666652 3222 222211111 12347999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+|- ..|. +... .+.+.|+++|.++=-.
T Consensus 217 vid-~~g~-------~~~~-~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 217 AID-SIGG-------PDGN-ELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEE-SSCH-------HHHH-HHHHTEEEEEEEEECC
T ss_pred EEE-CCCC-------hhHH-HHHHHhcCCCEEEEEe
Confidence 984 3442 2233 3347899999976543
No 351
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=74.27 E-value=3.7 Score=35.03 Aligned_cols=85 Identities=18% Similarity=0.188 Sum_probs=49.9
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.|+ |. +..+|+..| .+|++++.+++..+.+++ .+. + . ++..+-.++ .....+|+
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~----~g~-~-~-~~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLSR----LGV-E-Y-VGDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHT----TCC-S-E-EEETTCSTHHHHHHHHTTTCCEEE
T ss_pred CEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH----cCC-C-E-EeeCCcHHHHHHHHHHhCCCCCeE
Confidence 35777773 33 456666677 389999999876554432 232 2 1 222111111 11236999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+|. ..| .+.+..+.+.|+++|.++--
T Consensus 111 vi~-~~g--------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 111 VLN-SLA--------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEE-CCC--------THHHHHHHHTEEEEEEEEEC
T ss_pred EEE-CCc--------hHHHHHHHHHhccCCEEEEE
Confidence 994 233 24677778899999987643
No 352
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=72.74 E-value=2.4 Score=41.26 Aligned_cols=54 Identities=13% Similarity=0.038 Sum_probs=29.9
Q ss_pred CCCeEEEEeCCHHHHHHHHHHHHhc-----------CCCCeEEEEeCcccc----ccCCCCccEEEecc
Q 039233 102 RKLKIYAVEKNPNAVVTLHSLVRLE-----------GWEKTVTIVSCDMRC----WDAPEKADILVSEL 155 (359)
Q Consensus 102 a~~~V~AVE~n~~a~~~a~~~~~~n-----------~~~~~V~vi~~d~~~----~~~p~k~DiIVSEl 155 (359)
..++|+.-|.-.|...++=+.+... +.+.+-.++.+.-.. +-++..+|+|+|-+
T Consensus 90 pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~ 158 (374)
T 3b5i_A 90 PEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAF 158 (374)
T ss_dssp CCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecc
Confidence 4578999998777776665554321 011111233333222 22457899999853
No 353
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=71.82 E-value=3.5 Score=45.25 Aligned_cols=50 Identities=16% Similarity=0.146 Sum_probs=36.1
Q ss_pred CCcC--ChhHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc
Q 039233 85 VPDE--EASSLTTAAEETGR-KLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC 141 (359)
Q Consensus 85 v~D~--g~Gtl~~~A~~aga-~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~ 141 (359)
++|+ |+|-++....+||. + .|+|+|.++.|+.+.+.| +.+ ..++.+|+++
T Consensus 543 ~iDLFaG~GGlslGl~~AG~~~-vv~avEid~~A~~ty~~N-----~p~-~~~~~~DI~~ 595 (1002)
T 3swr_A 543 TLDVFSGCGGLSEGFHQAGISD-TLWAIEMWDPAAQAFRLN-----NPG-STVFTEDCNI 595 (1002)
T ss_dssp EEEESCTTSHHHHHHHHHTSEE-EEEEECSSHHHHHHHHHH-----CTT-SEEECSCHHH
T ss_pred EEEeccCccHHHHHHHHCCCCc-eEEEEECCHHHHHHHHHh-----CCC-CccccccHHH
Confidence 5676 55558888889995 4 789999999988877665 333 4566777654
No 354
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=71.75 E-value=0.78 Score=43.07 Aligned_cols=86 Identities=15% Similarity=0.145 Sum_probs=52.0
Q ss_pred ccCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.| +|. ...+|+..|+ +|++++.++.-.+.+++ .|. + . ++..+-.++ .....+|+
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~----~ga-~-~-~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKGA--HTIAVASTDEKLKIAKE----YGA-E-Y-LINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH----TTC-S-E-EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH----cCC-c-E-EEeCCCchHHHHHHHHhCCCCceE
Confidence 4577777 454 3456666774 89999999876655543 232 2 2 232222221 12357999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
++. ..|. +.+..+.+.|+++|.++=-.
T Consensus 221 vid-~~g~--------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 221 SFD-SVGK--------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEE-CCGG--------GGHHHHHHHEEEEEEEEECC
T ss_pred EEE-CCCh--------HHHHHHHHHhccCCEEEEEc
Confidence 984 4442 35777778999999876443
No 355
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=71.57 E-value=3.3 Score=38.37 Aligned_cols=80 Identities=15% Similarity=0.031 Sum_probs=47.5
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGS 158 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs 158 (359)
++|+-.|+|. ...+|+..|+ +|++++ ++.-.+.+++. |. -.+++ |..++ ...+|+++ |..|.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~-~~~~~~~~~~l----Ga---~~v~~-d~~~v--~~g~Dvv~-d~~g~ 209 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAGY--VVDLVS-ASLSQALAAKR----GV---RHLYR-EPSQV--TQKYFAIF-DAVNS 209 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--EEEEEC-SSCCHHHHHHH----TE---EEEES-SGGGC--CSCEEEEE-CC---
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--EEEEEE-ChhhHHHHHHc----CC---CEEEc-CHHHh--CCCccEEE-ECCCc
Confidence 4566667765 3466777784 899999 87666666542 32 22333 54334 67899998 44543
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
. .+..+.+.|+++|.++=
T Consensus 210 ---~-----~~~~~~~~l~~~G~~v~ 227 (315)
T 3goh_A 210 ---Q-----NAAALVPSLKANGHIIC 227 (315)
T ss_dssp ------------TTGGGEEEEEEEEE
T ss_pred ---h-----hHHHHHHHhcCCCEEEE
Confidence 1 12345678999998654
No 356
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=71.23 E-value=8.9 Score=36.16 Aligned_cols=93 Identities=9% Similarity=0.059 Sum_probs=55.7
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh-------cCCC-C---------eEEEEeCccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL-------EGWE-K---------TVTIVSCDMRCW 142 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~-------n~~~-~---------~V~vi~~d~~~~ 142 (359)
+|-=+|+|+ ++...+++| .+|+.+|.+++.++.+++.++. .|.- + +|++. .|..+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e- 83 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE- 83 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH-
T ss_pred eEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH-
Confidence 355568886 555556777 5899999999988888765432 2221 1 24433 23322
Q ss_pred cCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 143 DAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 143 ~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.-..+|+||- .+.. +-+...+++......++|+.+++=
T Consensus 84 -av~~aDlVie-avpe--~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 84 -AVEGVVHIQE-CVPE--NLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp -HTTTEEEEEE-CCCS--CHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred -HHhcCCEEEE-eccC--CHHHHHHHHHHHHhhCCCCeEEEE
Confidence 1247899984 2211 111234566667788899888763
No 357
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=70.91 E-value=4.4 Score=38.40 Aligned_cols=83 Identities=10% Similarity=0.079 Sum_probs=49.5
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCH---HHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccE
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNP---NAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADI 150 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~---~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~Di 150 (359)
++|+-.|+|. +..+|+..|+ +|++++.++ +-.+.+++. |. +.+ ..+ ++. ....+|+
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~~----ga-~~v---~~~--~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEET----KT-NYY---NSS--NGYDKLKDSVGKFDV 249 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHHH----TC-EEE---ECT--TCSHHHHHHHCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHHh----CC-cee---chH--HHHHHHHHhCCCCCE
Confidence 3566677765 3466666774 899999987 555555432 22 212 111 110 0146899
Q ss_pred EEeccccccCCCCChHHHH-HHHhhccCCCeEEEcc
Q 039233 151 LVSELLGSFGDNELSPECL-DGAQRFLKQDGISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L-~~a~r~Lkp~Gi~IP~ 185 (359)
+|. ..|. +..+ ..+.+.|+++|.++=-
T Consensus 250 vid-~~g~-------~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 250 IID-ATGA-------DVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEE-CCCC-------CTHHHHHHGGGEEEEEEEEEC
T ss_pred EEE-CCCC-------hHHHHHHHHHHHhcCCEEEEE
Confidence 984 3442 2256 7788899999987643
No 358
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=70.51 E-value=9.2 Score=35.92 Aligned_cols=86 Identities=12% Similarity=0.130 Sum_probs=51.4
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc------CCCCccEE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD------APEKADIL 151 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~------~p~k~DiI 151 (359)
++|+-.|+ |. +..+|+..|++ +|++++.+++-.+.+++. .|. + . ++..+-.++. ....+|++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~-~Vi~~~~~~~~~~~~~~~---~g~-~-~-~~d~~~~~~~~~~~~~~~~~~d~v 234 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCS-RVVGICGTHEKCILLTSE---LGF-D-A-AINYKKDNVAEQLRESCPAGVDVY 234 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHHT---SCC-S-E-EEETTTSCHHHHHHHHCTTCEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCC-eEEEEeCCHHHHHHHHHH---cCC-c-e-EEecCchHHHHHHHHhcCCCCCEE
Confidence 55676776 43 45667778865 999999998655544431 222 2 1 2222111110 11268999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
|. ..| .+.+..+.+.|+++|.++-
T Consensus 235 i~-~~G--------~~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 235 FD-NVG--------GNISDTVISQMNENSHIIL 258 (357)
T ss_dssp EE-SCC--------HHHHHHHHHTEEEEEEEEE
T ss_pred EE-CCC--------HHHHHHHHHHhccCcEEEE
Confidence 84 334 1467788889999999764
No 359
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=69.26 E-value=9.8 Score=37.68 Aligned_cols=91 Identities=13% Similarity=0.201 Sum_probs=53.6
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-------C------C-CCeEEEEeCccccccCCC
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-------G------W-EKTVTIVSCDMRCWDAPE 146 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-------~------~-~~~V~vi~~d~~~~~~p~ 146 (359)
|.=+|+|+ ++..++++| ..|+.+|.+++.++.+++.++.+ + . .....+ ..|... -.
T Consensus 40 V~VIGaG~MG~~iA~~la~~G--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~---~~ 113 (463)
T 1zcj_A 40 VGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE---LS 113 (463)
T ss_dssp EEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG---GT
T ss_pred EEEECcCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH---HC
Confidence 55568886 445555666 58999999998887776643211 0 0 111233 445432 25
Q ss_pred CccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 147 KADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 147 k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.+|+||- .+.. +-+...+++......++++.+++=
T Consensus 114 ~aDlVIe-aVpe--~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 114 TVDLVVE-AVFE--DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TCSEEEE-CCCS--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEE-cCCC--CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 7899984 3321 111224566666778899888773
No 360
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=69.26 E-value=1 Score=42.73 Aligned_cols=84 Identities=17% Similarity=0.200 Sum_probs=50.9
Q ss_pred ccCCcC-ChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccc-------ccCCCCccE
Q 039233 83 DRVPDE-EASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRC-------WDAPEKADI 150 (359)
Q Consensus 83 d~v~D~-g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~-------~~~p~k~Di 150 (359)
++|+-. |+|. ...+|+..|+ +|++++.++.-.+.+++. |... ++..+-.+ .. ...+|+
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~l----Ga~~---~~~~~~~~~~~~~~~~~-~~g~Dv 238 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFGA--EVYATAGSTGKCEACERL----GAKR---GINYRSEDFAAVIKAET-GQGVDI 238 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHH----TCSE---EEETTTSCHHHHHHHHH-SSCEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHhc----CCCE---EEeCCchHHHHHHHHHh-CCCceE
Confidence 356666 4443 4466677774 899999999877666542 3221 23222111 12 347999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+|- ..|. +.+..+.+.|+++|.++=-
T Consensus 239 vid-~~g~--------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 239 ILD-MIGA--------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEE-SCCG--------GGHHHHHHTEEEEEEEEEC
T ss_pred EEE-CCCH--------HHHHHHHHHhccCCEEEEE
Confidence 984 4442 2566777899999987643
No 361
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=69.05 E-value=6.3 Score=35.65 Aligned_cols=70 Identities=10% Similarity=0.033 Sum_probs=45.6
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCH-------------------HHHHHHHHHHHhcCCCCeEEEEeCcc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNP-------------------NAVVTLHSLVRLEGWEKTVTIVSCDM 139 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~-------------------~a~~~a~~~~~~n~~~~~V~vi~~d~ 139 (359)
.+|+=+|+|. ++...+++|.+ +|+.||.+. .-++.+.+.++.-+-.-+|+.+..+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~-~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCC-eEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 3678888875 55666788877 999999885 33455555554422344577777766
Q ss_pred cccc---CCCCccEEEe
Q 039233 140 RCWD---APEKADILVS 153 (359)
Q Consensus 140 ~~~~---~p~k~DiIVS 153 (359)
.+-. .-..+|+||.
T Consensus 111 ~~~~~~~~~~~~DvVi~ 127 (249)
T 1jw9_B 111 DDAELAALIAEHDLVLD 127 (249)
T ss_dssp CHHHHHHHHHTSSEEEE
T ss_pred CHhHHHHHHhCCCEEEE
Confidence 5321 1247899995
No 362
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=68.70 E-value=9.2 Score=36.18 Aligned_cols=83 Identities=17% Similarity=0.160 Sum_probs=50.6
Q ss_pred ccCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc------CCCCccEE
Q 039233 83 DRVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD------APEKADIL 151 (359)
Q Consensus 83 d~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~------~p~k~DiI 151 (359)
++|+-.| +|. +..+|+..|+ +|++++.+++-.+.+++ .|. + .++..+-.++. ....+|++
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~----~Ga-~--~~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKAKC--HVIGTCSSDEKSAFLKS----LGC-D--RPINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH----TTC-S--EEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHH----cCC-c--EEEecCChhHHHHHHHhcCCCCCEE
Confidence 4677777 454 4566666774 89999999876666554 232 2 12322211110 13468999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
|- ..|. +.+..+.+.|+++|.++
T Consensus 236 id-~~g~--------~~~~~~~~~l~~~G~iv 258 (362)
T 2c0c_A 236 YE-SVGG--------AMFDLAVDALATKGRLI 258 (362)
T ss_dssp EE-CSCT--------HHHHHHHHHEEEEEEEE
T ss_pred EE-CCCH--------HHHHHHHHHHhcCCEEE
Confidence 84 4442 36777888999999875
No 363
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=68.15 E-value=3.2 Score=40.81 Aligned_cols=40 Identities=18% Similarity=0.085 Sum_probs=29.8
Q ss_pred cCCcC--ChhHHHHHHHHcC--CCCe----EEEEeCCHHHHHHHHHHHH
Q 039233 84 RVPDE--EASSLTTAAEETG--RKLK----IYAVEKNPNAVVTLHSLVR 124 (359)
Q Consensus 84 ~v~D~--g~Gtl~~~A~~ag--a~~~----V~AVE~n~~a~~~a~~~~~ 124 (359)
+|+|+ |+|.+++...++| .+ - |.|+|.++.|+.+-+.+..
T Consensus 12 rvldLFsGiGG~~~Gl~~aG~~~~-~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 12 KVFEAFAGIGSQFKALKNIARSKN-WEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEETCTTCHHHHHHHHHHHHHT-EEEEEEEEECCBHHHHHHHHHHHC
T ss_pred eEEEEecCcCHHHHHHHHhCCccc-cceeeEEEEecCHHHHHHHHHHcC
Confidence 46676 5555777777777 34 4 8999999999988887764
No 364
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=68.10 E-value=1.2 Score=41.52 Aligned_cols=85 Identities=11% Similarity=0.130 Sum_probs=50.9
Q ss_pred ccCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.| +|. +..+|+..|+ +|++++.+++..+.+++. +. + . ++..+-.++ .....+|+
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~~----g~-~-~-~~~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKA----GA-W-Q-VINYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH----TC-S-E-EEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc----CC-C-E-EEECCCccHHHHHHHHhCCCCceE
Confidence 3567677 443 4566667773 899999998766666542 32 2 1 222111111 11246899
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+|. ..| .+.+..+.+.|+++|.++=-
T Consensus 213 vi~-~~g--------~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 213 VYD-SVG--------RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EEE-CSC--------GGGHHHHHHTEEEEEEEEEC
T ss_pred EEE-CCc--------hHHHHHHHHHhcCCCEEEEE
Confidence 984 233 24677788899999987643
No 365
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=67.96 E-value=5.2 Score=36.61 Aligned_cols=97 Identities=14% Similarity=0.096 Sum_probs=56.8
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc---------CCC--------CeEEEEeCccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE---------GWE--------KTVTIVSCDMRCW 142 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n---------~~~--------~~V~vi~~d~~~~ 142 (359)
+|.=+|+|+ ++..++++| .+|+.+|.+++.++.+++.++.+ +.. .+++. ..|..+.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 344468886 556666777 58999999998888777664321 111 12333 2333321
Q ss_pred cCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccc
Q 039233 143 DAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 143 ~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
-..+|+||- .+.. +.+...+++......++++.+++=...+
T Consensus 83 --~~~aDlVi~-av~~--~~~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 83 --VKDADLVIE-AVPE--SLDLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp --TTTCSEEEE-CCCS--CHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred --hccCCEEEE-eccC--cHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 247899984 2221 1113455666677788998887644333
No 366
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=67.55 E-value=1.3 Score=42.07 Aligned_cols=88 Identities=13% Similarity=0.130 Sum_probs=50.9
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccc-cc--cCCCCccEEEecc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMR-CW--DAPEKADILVSEL 155 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~-~~--~~p~k~DiIVSEl 155 (359)
++|+-.|+|. ...+|+..|+ +|++++.++.-.+.|++ .|... ++..+-. ++ .....+|+||- .
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~~~~~~~~~~----lGa~~---v~~~~~~~~~~~~~~~~~D~vid-~ 250 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGA--ETYVISRSSRKREDAMK----MGADH---YIATLEEGDWGEKYFDTFDLIVV-C 250 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHH----HTCSE---EEEGGGTSCHHHHSCSCEEEEEE-C
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHH----cCCCE---EEcCcCchHHHHHhhcCCCEEEE-C
Confidence 4677778765 3466666774 79999998876666654 23222 2322111 11 11147999983 4
Q ss_pred ccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 156 LGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 156 lGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.|... ++.+..+.+.|+++|.++--
T Consensus 251 ~g~~~-----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 251 ASSLT-----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CSCST-----TCCTTTGGGGEEEEEEEEEC
T ss_pred CCCCc-----HHHHHHHHHHhcCCCEEEEe
Confidence 44310 12344556789999987643
No 367
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=67.47 E-value=8.5 Score=36.05 Aligned_cols=83 Identities=13% Similarity=0.211 Sum_probs=50.7
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccc---ccc------CCCCc
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMR---CWD------APEKA 148 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~---~~~------~p~k~ 148 (359)
++|+-.|+ |. ++.+|+..|+ +|++++.++...+.+++ .+. + .++ |.. ++. ....+
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga--~V~~~~~~~~~~~~~~~----~g~-~--~~~--d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMGY--RVLGIDGGEGKEELFRS----IGG-E--VFI--DFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSTTHHHHHHH----TTC-C--EEE--ETTTCSCHHHHHHHHHTSCE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--cEEEEcCCHHHHHHHHH----cCC-c--eEE--ecCccHhHHHHHHHHhCCCC
Confidence 35777776 33 4566666773 89999998876555543 232 2 122 222 110 01268
Q ss_pred cEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 149 DILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 149 DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
|++|. ..| .++.+..+.+.|+++|.++=
T Consensus 240 D~vi~-~~g-------~~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 240 HGVIN-VSV-------SEAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp EEEEE-CSS-------CHHHHHHHTTSEEEEEEEEE
T ss_pred CEEEE-CCC-------cHHHHHHHHHHHhcCCEEEE
Confidence 99984 233 34578888899999998763
No 368
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=66.92 E-value=0.91 Score=42.79 Aligned_cols=117 Identities=14% Similarity=0.058 Sum_probs=64.3
Q ss_pred CCccccCcHHHHHHHhcCcccHHHHHHHHHHh-hc--ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 039233 49 QPLMDNLEAQTYETFEKDSVKYIQYQRAIGNA-LV--DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHS 121 (359)
Q Consensus 49 qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~-~~--d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~ 121 (359)
.|+-++++...-..+ -.. -..+|. ++.+. ++ ++|+-.|+|. +..+|+..|+ +|++++.++.-.+.+++
T Consensus 132 ~~~P~~~~~~~aa~l-~~~-~~ta~~-~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 132 VKIPDNLSFEEAAPI-FCA-GVTTYK-ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL--NVVAVDIGDEKLELAKE 206 (339)
T ss_dssp EECCTTSCHHHHGGG-GTH-HHHHHH-HHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH
T ss_pred EECCCCCCHHHhhhh-hhh-HHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH
Confidence 566677765432222 111 122332 33332 32 4677777654 4466667773 89999999876666543
Q ss_pred HHHhcCCCCeEEEEeCcccccc-----CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 122 LVRLEGWEKTVTIVSCDMRCWD-----APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 122 ~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.|.. .++.-.-.++. ....+|++|. ..| .++.+..+.+.|+++|.++--
T Consensus 207 ----lGa~---~~~d~~~~~~~~~~~~~~~~~d~vid-~~g-------~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 207 ----LGAD---LVVNPLKEDAAKFMKEKVGGVHAAVV-TAV-------SKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp ----TTCS---EEECTTTSCHHHHHHHHHSSEEEEEE-SSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred ----CCCC---EEecCCCccHHHHHHHHhCCCCEEEE-CCC-------CHHHHHHHHHHhhcCCEEEEe
Confidence 2332 12321111110 0136899884 344 245777888899999987643
No 369
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=66.91 E-value=7.6 Score=40.08 Aligned_cols=139 Identities=18% Similarity=0.232 Sum_probs=80.8
Q ss_pred eeecccchhhhcccccCCCCCccccCcHHHHHHHhcCcccHHHHHHHHHHhh-cc--cCCcCChhH----HH-HHH-HH-
Q 039233 30 HIISDEFCTIEFSNYYLSFQPLMDNLEAQTYETFEKDSVKYIQYQRAIGNAL-VD--RVPDEEASS----LT-TAA-EE- 99 (359)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~~-~d--~v~D~g~Gt----l~-~~A-~~- 99 (359)
+.++.+|+++||++..- | ..+..+|++-----+.|+ .. ++ +|+|+|-|| ++ ..+ .+
T Consensus 26 ~~~s~~~~~~y~s~~~~--------~-~e~~~vf~~~~~l~~~~~-----~~~~~~~~i~e~gfG~Gln~l~~~~~~~~~ 91 (676)
T 3ps9_A 26 TPVSRDFDDVYFSNDNG--------L-EETRYVFLGGNQLEVRFP-----EHPHPLFVVAESGFGTGLNFLTLWQAFDQF 91 (676)
T ss_dssp CCEETTTTEESSCTTTH--------H-HHHHHHTTGGGTHHHHGG-----GCSSSEEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CccCccCCCcccCCcCH--------H-HhhHhhhhccCChhHHHH-----hCCCCceEEEEeCCchHHHHHHHHHHHHHh
Confidence 45888999999987531 2 244556654211100010 11 12 478998877 22 112 11
Q ss_pred -------cCCCCeEEEEeC---CHHHHHHH-----------HHHHHhcCCC---------------CeEEEEeCccccc-
Q 039233 100 -------TGRKLKIYAVEK---NPNAVVTL-----------HSLVRLEGWE---------------KTVTIVSCDMRCW- 142 (359)
Q Consensus 100 -------aga~~~V~AVE~---n~~a~~~a-----------~~~~~~n~~~---------------~~V~vi~~d~~~~- 142 (359)
.+.+.+++++|+ +++.+..+ ++..+ .|. -+++++.||+++.
T Consensus 92 ~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l 169 (676)
T 3ps9_A 92 REAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQA--QWPMPLPGCHRLLLDAGRVTLDLWFGDINELT 169 (676)
T ss_dssp HHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHH--HCCCCCSEEEEEEEGGGTEEEEEEESCHHHHG
T ss_pred hhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHH--hCcccCCCceEEEecCCcEEEEEecCCHHHHH
Confidence 133467999999 55544311 12221 132 3577899999874
Q ss_pred -cC----CCCccEEEeccccccC---CCC-ChHHHHHHHhhccCCCeEEEcccc
Q 039233 143 -DA----PEKADILVSELLGSFG---DNE-LSPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 143 -~~----p~k~DiIVSEllGs~~---~~E-l~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
++ ..++|++. ++.|. ..| -..+++....++++|||++....+
T Consensus 170 ~~~~~~~~~~~d~~~---~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~ 220 (676)
T 3ps9_A 170 SQLDDSLNQKVDAWF---LDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS 220 (676)
T ss_dssp GGBCGGGTTCEEEEE---ECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCC
T ss_pred HhcccccCCcccEEE---ECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 12 35799998 66665 222 357788888999999999776554
No 370
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=66.57 E-value=8.1 Score=35.64 Aligned_cols=119 Identities=14% Similarity=0.139 Sum_probs=65.1
Q ss_pred CCCccccCcHHHHHHHhcCcccHHHHH--HHHHHh-h--cc-cCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHH
Q 039233 48 FQPLMDNLEAQTYETFEKDSVKYIQYQ--RAIGNA-L--VD-RVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAV 116 (359)
Q Consensus 48 ~qPl~dnL~s~~Ye~f~~D~vry~~Y~--~AI~~~-~--~d-~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~ 116 (359)
..|+-++++....-.+.- .-..+|. .++.+. + .+ .|+=.|+ |. ...+|+..|+ +|++++.++.-.
T Consensus 109 ~~~iP~~~~~~~aa~l~~--~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga--~Vi~~~~~~~~~ 184 (324)
T 3nx4_A 109 LVALPAGLSSRNAMIIGT--AGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY--QVAAVSGRESTH 184 (324)
T ss_dssp CEECCTTCCHHHHHHHHH--HHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC--CEEEEESCGGGH
T ss_pred cEECCCCCCHHHHHHhhh--HHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHH
Confidence 356777776554433321 1112232 222332 2 12 4766676 54 3466777774 899999998777
Q ss_pred HHHHHHHHhcCCCCeEEEEeCcccccc--CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 117 VTLHSLVRLEGWEKTVTIVSCDMRCWD--APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 117 ~~a~~~~~~n~~~~~V~vi~~d~~~~~--~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+.+++. |... + +-..+...+. ....+|+++ |..|. +.+..+.+.|+++|.++=-
T Consensus 185 ~~~~~l----Ga~~-v-i~~~~~~~~~~~~~~~~d~v~-d~~g~--------~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 185 GYLKSL----GANR-I-LSRDEFAESRPLEKQLWAGAI-DTVGD--------KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp HHHHHH----TCSE-E-EEGGGSSCCCSSCCCCEEEEE-ESSCH--------HHHHHHHHTEEEEEEEEEC
T ss_pred HHHHhc----CCCE-E-EecCCHHHHHhhcCCCccEEE-ECCCc--------HHHHHHHHHHhcCCEEEEE
Confidence 666552 3322 1 2122211111 124689877 34442 2677888999999997644
No 371
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=66.51 E-value=6.5 Score=39.38 Aligned_cols=97 Identities=11% Similarity=0.137 Sum_probs=58.0
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-------CC-C--------CeEEEEeCcccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-------GW-E--------KTVTIVSCDMRCWD 143 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-------~~-~--------~~V~vi~~d~~~~~ 143 (359)
+|.=+|+|+ ++...+++| ..|+.+|.|++.++.+++.++.+ |. . .+|+.. .|...
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~-- 81 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHG--HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIHA-- 81 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGGG--
T ss_pred EEEEECcCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHHH--
Confidence 344468876 556666777 58999999999988877654321 11 0 134443 33332
Q ss_pred CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccce
Q 039233 144 APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTS 189 (359)
Q Consensus 144 ~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~ 189 (359)
-..+|+||- .+.. +-+...+++......++++.+++=...++
T Consensus 82 -~~~aDlVIe-AVpe--~~~vk~~v~~~l~~~~~~~~IlasntSti 123 (483)
T 3mog_A 82 -LAAADLVIE-AASE--RLEVKKALFAQLAEVCPPQTLLTTNTSSI 123 (483)
T ss_dssp -GGGCSEEEE-CCCC--CHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred -hcCCCEEEE-cCCC--cHHHHHHHHHHHHHhhccCcEEEecCCCC
Confidence 257899984 2211 11123456677778889998876544444
No 372
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=66.09 E-value=9.6 Score=30.45 Aligned_cols=60 Identities=18% Similarity=0.138 Sum_probs=40.8
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccEEEe
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIVS 153 (359)
+++=+|+|. ++....+.| .+|+++|.|++.++.+++ . .+.++.+|..+-+ ..+++|+||.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAG--KKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 466678876 455555666 489999999976655442 2 2678899988743 1357899885
No 373
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=66.06 E-value=4.1 Score=38.20 Aligned_cols=85 Identities=19% Similarity=0.188 Sum_probs=50.3
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.|+ |. +..+|+..|+ +|++++.++...+.+++ .|. +. ++..+-.++ .....+|+
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~----~ga-~~--~~d~~~~~~~~~~~~~~~~~~~d~ 238 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFGA--RVIATAGSEDKLRRAKA----LGA-DE--TVNYTHPDWPKEVRRLTGGKGADK 238 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH----HTC-SE--EEETTSTTHHHHHHHHTTTTCEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh----cCC-CE--EEcCCcccHHHHHHHHhCCCCceE
Confidence 35677776 43 4566666773 89999999877766653 232 21 232211111 11246899
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+|. ..| . +.+..+.+.|+++|.++=-
T Consensus 239 vi~-~~g----~----~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 239 VVD-HTG----A----LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp EEE-SSC----S----SSHHHHHHHEEEEEEEEES
T ss_pred EEE-CCC----H----HHHHHHHHhhccCCEEEEE
Confidence 984 344 1 2456677889999987643
No 374
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=65.63 E-value=15 Score=34.07 Aligned_cols=85 Identities=16% Similarity=0.135 Sum_probs=50.1
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEe-Ccccccc------CCCCccE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVS-CDMRCWD------APEKADI 150 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~-~d~~~~~------~p~k~Di 150 (359)
++|+-.|+ |. +..+|+..|+ +|++++.++...+.+++ ..|. + . ++. .+-.++. ....+|+
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~---~~g~-~-~-~~d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMMGC--YVVGSAGSKEKVDLLKT---KFGF-D-D-AFNYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH---TSCC-S-E-EEETTSCSCSHHHHHHHCTTCEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH---HcCC-c-e-EEecCCHHHHHHHHHHHhCCCCcE
Confidence 45777775 44 4466666773 89999999876555542 1222 2 2 222 1111110 1246899
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+|. ..| . +.+..+.+.|+++|.++=
T Consensus 229 vi~-~~g-------~-~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 229 YFE-NVG-------G-KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp EEE-SSC-------H-HHHHHHHTTEEEEEEEEE
T ss_pred EEE-CCC-------H-HHHHHHHHHHhcCCEEEE
Confidence 984 233 2 367778889999998763
No 375
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=64.72 E-value=17 Score=33.94 Aligned_cols=88 Identities=15% Similarity=0.075 Sum_probs=53.0
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
+|.=+|+|. ++...+++|...+|+++|.+++.++.+++ .|..++ ...|..+. .-..+|+||- .+.
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~~---~~~~~~~~-~~~~aDvVil-avp-- 103 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIIDE---GTTSIAKV-EDFSPDFVML-SSP-- 103 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCSE---EESCTTGG-GGGCCSEEEE-CSC--
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcch---hcCCHHHH-hhccCCEEEE-eCC--
Confidence 455678875 55566677743489999999976655442 333322 22344331 1247899884 121
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.....+++......|+++.+++=
T Consensus 104 --~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 104 --VRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp --GGGHHHHHHHHHHHSCTTCEEEE
T ss_pred --HHHHHHHHHHHhhccCCCcEEEE
Confidence 11245677777778899887764
No 376
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=64.03 E-value=5.2 Score=39.29 Aligned_cols=85 Identities=22% Similarity=0.216 Sum_probs=51.0
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc------------------
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM------------------ 139 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~------------------ 139 (359)
++|+=.|+ |. ...+|+..|+ +|+++..++.-.+.|++. |... ++...-
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~Ga--~vi~~~~~~~~~~~~~~l----Ga~~---vi~~~~~d~~~~~~~~~~~~~~~~ 300 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGGA--NPICVVSSPQKAEICRAM----GAEA---IIDRNAEGYRFWKDENTQDPKEWK 300 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHH----TCCE---EEETTTTTCCSEEETTEECHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--eEEEEECCHHHHHHHHhh----CCcE---EEecCcCcccccccccccchHHHH
Confidence 35666676 54 3455666773 788998888766666542 3322 222111
Q ss_pred ------ccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 140 ------RCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 140 ------~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+++.....+|+++ |..|. +.+..+.+.|+++|.++=-
T Consensus 301 ~~~~~i~~~t~g~g~Dvvi-d~~G~--------~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 301 RFGKRIRELTGGEDIDIVF-EHPGR--------ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHTSCCEEEEE-ECSCH--------HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHhCCCCCcEEE-EcCCc--------hhHHHHHHHhhCCcEEEEE
Confidence 1111224799887 34442 4677888899999997744
No 377
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=63.91 E-value=1.2 Score=41.80 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=51.4
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc------CCCCccEE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD------APEKADIL 151 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~------~p~k~DiI 151 (359)
++|+-.|+ |. +..+|+..|+ +|++++.+++-.+.+. +..|. + . ++...-.++. ....+|++
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~---~~~g~-~-~-~~~~~~~~~~~~~~~~~~~~~d~v 222 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKGC--RVVGIAGGAEKCRFLV---EELGF-D-G-AIDYKNEDLAAGLKRECPKGIDVF 222 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHH---HTTCC-S-E-EEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHH---HHcCC-C-E-EEECCCHHHHHHHHHhcCCCceEE
Confidence 46777776 43 4466667774 8999999986555542 22233 2 1 2222111110 13469998
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|- ..|. +.+..+.+.|+++|.++=-
T Consensus 223 i~-~~g~--------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 223 FD-NVGG--------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EE-SSCH--------HHHHHHHTTEEEEEEEEEC
T ss_pred EE-CCCc--------chHHHHHHHHhhCCEEEEE
Confidence 84 3332 3677888999999997743
No 378
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=63.87 E-value=3.3 Score=38.43 Aligned_cols=53 Identities=13% Similarity=0.087 Sum_probs=33.8
Q ss_pred CeEEEEeCccccc-c-C-CCCccEEEeccc-c---ccCC--CC---------C---hHHHHHHHhhccCCCeEE
Q 039233 130 KTVTIVSCDMRCW-D-A-PEKADILVSELL-G---SFGD--NE---------L---SPECLDGAQRFLKQDGIS 182 (359)
Q Consensus 130 ~~V~vi~~d~~~~-~-~-p~k~DiIVSEll-G---s~~~--~E---------l---~~e~L~~a~r~Lkp~Gi~ 182 (359)
.++++++||+.++ . + ++++|+||+..- . .... ++ . +.+++..+.+.|||||.+
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 3589999999984 2 3 368999998642 1 1110 00 0 134566778999999975
No 379
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=63.36 E-value=18 Score=32.84 Aligned_cols=59 Identities=17% Similarity=0.103 Sum_probs=44.1
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEecc
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSEL 155 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSEl 155 (359)
++...++.|+ +|+.++.+++.++.+.+.++. .+.++..+.+|+++.+- -.+.|++|.+-
T Consensus 23 iA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~--~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 23 IAKKFALNDS--IVVAVELLEDRLNQIVQELRG--MGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCC--EEEEEECCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5555567774 899999999887777776665 45679999999998641 15799999763
No 380
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=62.85 E-value=24 Score=31.31 Aligned_cols=95 Identities=9% Similarity=0.020 Sum_probs=54.7
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
+|+=.|+|- +.....+.| .+|+++..++.....+. . .+++++.+|+.+++ -..+|+||. +.+..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~-~~~~d~vi~-~a~~~ 74 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQG--WRIIGTSRNPDQMEAIR----A----SGAEPLLWPGEEPS-LDGVTHLLI-STAPD 74 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGT--CEEEEEESCGGGHHHHH----H----TTEEEEESSSSCCC-CTTCCEEEE-CCCCB
T ss_pred cEEEECCcHHHHHHHHHHHHCC--CEEEEEEcChhhhhhHh----h----CCCeEEEecccccc-cCCCCEEEE-CCCcc
Confidence 455567664 444445556 58999999886433222 1 34999999999988 678999996 33333
Q ss_pred CCCC-ChHHHHHHHhhc-cCCCeEEEcccccee
Q 039233 160 GDNE-LSPECLDGAQRF-LKQDGISIPSSYTSF 190 (359)
Q Consensus 160 ~~~E-l~~e~L~~a~r~-Lkp~Gi~IP~~~t~~ 190 (359)
...+ ....+++++.+. -+..-++.-++...|
T Consensus 75 ~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vy 107 (286)
T 3ius_A 75 SGGDPVLAALGDQIAARAAQFRWVGYLSTTAVY 107 (286)
T ss_dssp TTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGG
T ss_pred ccccHHHHHHHHHHHhhcCCceEEEEeecceec
Confidence 2222 223344555442 122234444544444
No 381
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=62.47 E-value=14 Score=33.13 Aligned_cols=60 Identities=18% Similarity=0.326 Sum_probs=42.9
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|+++..++.....+.+.++..+...++.++.+|+.+.+. ..++|+||..
T Consensus 48 la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~ 118 (279)
T 1xg5_A 48 VARALVQQG--LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINN 118 (279)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 555555667 48999999987666666666655566789999999988531 1268999963
No 382
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=62.33 E-value=4 Score=37.49 Aligned_cols=82 Identities=12% Similarity=0.155 Sum_probs=50.3
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc-ccc--cCCCCccEEEec
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM-RCW--DAPEKADILVSE 154 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~-~~~--~~p~k~DiIVSE 154 (359)
++|+-.|+ |. ...+|+..|+ +|++++.++.-.+.+++ .|. +. ++..+- .++ .. ..+|+++.
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~----~ga-~~--~~~~~~~~~~~~~~-~~~d~vid- 195 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEKLALPLA----LGA-EE--AATYAEVPERAKAW-GGLDLVLE- 195 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGGSHHHHH----TTC-SE--EEEGGGHHHHHHHT-TSEEEEEE-
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh----cCC-CE--EEECCcchhHHHHh-cCceEEEE-
Confidence 46777776 54 4466666774 89999998876655543 232 21 232211 111 11 57999985
Q ss_pred cccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 155 LLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 155 llGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
.|. +.+..+.+.|+++|.++-
T Consensus 196 -~g~--------~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 196 -VRG--------KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp -CSC--------TTHHHHHTTEEEEEEEEE
T ss_pred -CCH--------HHHHHHHHhhccCCEEEE
Confidence 553 246677789999998764
No 383
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=62.23 E-value=1.6 Score=41.29 Aligned_cols=82 Identities=17% Similarity=0.182 Sum_probs=49.7
Q ss_pred ccCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.| +|. ...+|+..|+ +|+++ .++.-.+.+++ .|.. . +. +-.++ .....+|+
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga--~Vi~~-~~~~~~~~~~~----lGa~--~--i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALARGA--RVFAT-ARGSDLEYVRD----LGAT--P--ID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEE-ECHHHHHHHHH----HTSE--E--EE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEE-eCHHHHHHHHH----cCCC--E--ec-cCCCHHHHHHHHhcCCCceE
Confidence 4577777 454 3466667774 89999 88876655544 2322 2 22 22222 12347999
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
++- ..|. +.+..+.+.|+++|.++=-
T Consensus 220 vid-~~g~--------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 220 VYD-TLGG--------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEE-SSCT--------HHHHHHHHHEEEEEEEEES
T ss_pred EEE-CCCc--------HHHHHHHHHHhcCCeEEEE
Confidence 883 4441 3677788899999987643
No 384
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=61.83 E-value=21 Score=35.27 Aligned_cols=88 Identities=15% Similarity=0.197 Sum_probs=48.1
Q ss_pred cCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHH------------HHhcCCCCeEEEEeCccccccCCCCccE
Q 039233 87 DEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSL------------VRLEGWEKTVTIVSCDMRCWDAPEKADI 150 (359)
Q Consensus 87 D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~------------~~~n~~~~~V~vi~~d~~~~~~p~k~Di 150 (359)
=+|.|. ++...+++| .+|+++|.|++.++.+++- ++++--..+++.- .| .+.+|+
T Consensus 16 ViGlGyvGlp~A~~La~~G--~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td------~~~aDv 86 (431)
T 3ojo_A 16 VVGLGYIGLPTSIMFAKHG--VDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TT------PEASDV 86 (431)
T ss_dssp EECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SS------CCCCSE
T ss_pred EEeeCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cc------hhhCCE
Confidence 357765 334445556 5999999999877665431 1111002234332 23 246899
Q ss_pred EEeccccccCCCC------C--hHHHHHHHhhccCCCeEEEc
Q 039233 151 LVSELLGSFGDNE------L--SPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 151 IVSEllGs~~~~E------l--~~e~L~~a~r~Lkp~Gi~IP 184 (359)
||. .+++-.+.+ + .....+...+.|++|.++|=
T Consensus 87 vii-~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~ 127 (431)
T 3ojo_A 87 FII-AVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV 127 (431)
T ss_dssp EEE-CCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE
T ss_pred EEE-EeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE
Confidence 886 456533211 1 12233445577899888773
No 385
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=60.97 E-value=6.4 Score=37.02 Aligned_cols=57 Identities=12% Similarity=0.028 Sum_probs=38.0
Q ss_pred CeEEEEeCccccc-c-C-CCCccEEEeccc-cccC----CC-------CChHHHHHHHhhccCCCeEEEccc
Q 039233 130 KTVTIVSCDMRCW-D-A-PEKADILVSELL-GSFG----DN-------ELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 130 ~~V~vi~~d~~~~-~-~-p~k~DiIVSEll-Gs~~----~~-------El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+++++++||..++ . + .+++|+|++..- +... ++ +.+.+.|..+.+.|||||.++=..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 4689999999874 2 3 468999997631 1110 11 134567788899999999865443
No 386
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=60.67 E-value=12 Score=36.69 Aligned_cols=61 Identities=20% Similarity=0.269 Sum_probs=43.6
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccEEEe
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADILVS 153 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIVS 153 (359)
+.|+=+|+|. ++....+.| ..|++||.|++.++.+++ . .+.++.||.++.+ .-+++|+||.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 3456678875 555555666 589999999987766553 2 2668999998853 2368999886
No 387
>1yi9_A PAM, peptidyl-glycine alpha-amidating monooxygenase; bioactive peptide activation, ascorbate, oxidoreductase; 1.70A {Rattus norvegicus} SCOP: b.121.1.2 b.121.1.2 PDB: 1sdw_A* 3mib_A 3mic_A 3mid_A 3mie_A 3mif_A 3mig_A 3mih_A 3mlj_A 3mlk_A 3mll_A 1yip_A 1phm_A 1opm_A 3phm_A 1yjl_A 1yjk_A
Probab=60.23 E-value=18 Score=34.15 Aligned_cols=30 Identities=20% Similarity=0.187 Sum_probs=26.1
Q ss_pred cccceeeeecCCeEEecCCCeEEEEEEeee
Q 039233 299 LFRFAIFFPLRTPVCIRPGSPLEVHFWRCC 328 (359)
Q Consensus 299 tsW~q~~fpl~~Pi~V~~G~~i~~~~~R~~ 328 (359)
..|.|.+++|++|+.|++||.|..+..-.+
T Consensus 222 ~~~~Q~~y~l~~~v~i~~GD~L~~~C~yd~ 251 (309)
T 1yi9_A 222 PQLPQAFYPVEHPVDVTFGDILAARCVFTG 251 (309)
T ss_dssp TTSCCSCEEEEEEEEECTTCEEEEEEEEEC
T ss_pred CCCceeEEEcCCceEECCCCEEEEEEEecC
Confidence 789999999999999999999998765444
No 388
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=59.35 E-value=2.3 Score=40.25 Aligned_cols=85 Identities=12% Similarity=0.089 Sum_probs=50.0
Q ss_pred ccCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.| +|. +..+|+..|+ +|++++.+++-.+.+++. |. + . ++..+-.++ .....+|+
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~~----g~-~-~-~~~~~~~~~~~~~~~~~~~~~~d~ 234 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAGA--IPLVTAGSQKKLQMAEKL----GA-A-A-GFNYKKEDFSEATLKFTKGAGVNL 234 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH----TC-S-E-EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc----CC-c-E-EEecCChHHHHHHHHHhcCCCceE
Confidence 3566666 443 4566666773 899999998776666432 22 2 1 222221111 11246899
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
+|- ..|. + .+..+.+.|+++|.++--
T Consensus 235 vi~-~~G~-------~-~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 235 ILD-CIGG-------S-YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp EEE-SSCG-------G-GHHHHHHHEEEEEEEEEC
T ss_pred EEE-CCCc-------h-HHHHHHHhccCCCEEEEE
Confidence 984 3442 2 466677889999987643
No 389
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=59.30 E-value=8.3 Score=40.69 Aligned_cols=39 Identities=23% Similarity=0.144 Sum_probs=26.6
Q ss_pred cCCcC--ChhHHHHHHHHcC----CCC-eEEEEeCCHHHHHHHHHH
Q 039233 84 RVPDE--EASSLTTAAEETG----RKL-KIYAVEKNPNAVVTLHSL 122 (359)
Q Consensus 84 ~v~D~--g~Gtl~~~A~~ag----a~~-~V~AVE~n~~a~~~a~~~ 122 (359)
+++|+ |||=++.-..+|| .++ .|+|||.++.|+++.+.|
T Consensus 214 tvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~N 259 (784)
T 4ft4_B 214 TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYN 259 (784)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHH
T ss_pred eEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHH
Confidence 36787 5554554444444 222 589999999999988876
No 390
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=59.01 E-value=18 Score=33.37 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=49.6
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc------CCCCccEE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD------APEKADIL 151 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~------~p~k~DiI 151 (359)
++|+-.|+ |. ++.+|+..|+ +|++++.+++..+.+++ .+. + ..+-..+..++. ....+|++
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~----~g~-~-~~~d~~~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAGSDEKIAYLKQ----IGF-D-AAFNYKTVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH----TTC-S-EEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh----cCC-c-EEEecCCHHHHHHHHHHHhCCCCeEE
Confidence 35777776 43 4566667774 89999999876655532 232 2 222111111110 12468999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
|. ..|. +.+..+.+.|+++|.++=
T Consensus 219 i~-~~g~--------~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 219 FD-NVGG--------EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp EE-SSCH--------HHHHHHHTTEEEEEEEEE
T ss_pred EE-CCCh--------HHHHHHHHHHhcCCEEEE
Confidence 84 3331 256777889999998763
No 391
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=58.63 E-value=1.5 Score=41.34 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=47.5
Q ss_pred ChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-------CCCCccEEEecccc
Q 039233 89 EASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-------APEKADILVSELLG 157 (359)
Q Consensus 89 g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-------~p~k~DiIVSEllG 157 (359)
|+|. ...+|+..|+ +|++++.++.-.+.+++ .|. + .++..+-.++. ....+|+++- ..|
T Consensus 173 g~g~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~----~Ga-~--~~~~~~~~~~~~~v~~~~~~~g~D~vid-~~g 242 (349)
T 3pi7_A 173 GASQLCKLIIGLAKEEGF--RPIVTVRRDEQIALLKD----IGA-A--HVLNEKAPDFEATLREVMKAEQPRIFLD-AVT 242 (349)
T ss_dssp TTSHHHHHHHHHHHHHTC--EEEEEESCGGGHHHHHH----HTC-S--EEEETTSTTHHHHHHHHHHHHCCCEEEE-SSC
T ss_pred CCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH----cCC-C--EEEECCcHHHHHHHHHHhcCCCCcEEEE-CCC
Confidence 6654 3466777784 89999998876666654 232 2 22332222221 1136999983 444
Q ss_pred ccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 158 SFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 158 s~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
. + .+..+.+.|+++|.++=-
T Consensus 243 ~-------~-~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 243 G-------P-LASAIFNAMPKRARWIIY 262 (349)
T ss_dssp H-------H-HHHHHHHHSCTTCEEEEC
T ss_pred C-------h-hHHHHHhhhcCCCEEEEE
Confidence 2 2 346677899999987643
No 392
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=58.55 E-value=19 Score=33.03 Aligned_cols=94 Identities=14% Similarity=0.206 Sum_probs=53.4
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHh-------cCC-C-------------CeEEEEeCc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRL-------EGW-E-------------KTVTIVSCD 138 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~-------n~~-~-------------~~V~vi~~d 138 (359)
+|.=+|+|. ++...+++| .+|+.+|.+++.++.+++.+++ .|. . .+|++. .|
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~-~~ 93 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS-TD 93 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-SC
T ss_pred EEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-cC
Confidence 455678886 445555666 5899999999887776554332 121 1 134443 33
Q ss_pred cccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 139 MRCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 139 ~~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
..+ .-..+|+||. .+.. +.+...+++......++++.+++-.
T Consensus 94 ~~~--~~~~aD~Vi~-avp~--~~~~~~~v~~~l~~~~~~~~iv~s~ 135 (302)
T 1f0y_A 94 AAS--VVHSTDLVVE-AIVE--NLKVKNELFKRLDKFAAEHTIFASN 135 (302)
T ss_dssp HHH--HTTSCSEEEE-CCCS--CHHHHHHHHHHHTTTSCTTCEEEEC
T ss_pred HHH--hhcCCCEEEE-cCcC--cHHHHHHHHHHHHhhCCCCeEEEEC
Confidence 331 1247899984 2211 0011234566666778888877643
No 393
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=58.42 E-value=9.1 Score=36.29 Aligned_cols=103 Identities=12% Similarity=0.099 Sum_probs=62.2
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-------C-CC---------CeEEEEeCccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-------G-WE---------KTVTIVSCDMRCW 142 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-------~-~~---------~~V~vi~~d~~~~ 142 (359)
+|.=+|+|+ ++..++.+| ..|+.+|.+++++..+.++++++ + .. .+|+.. .|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~~- 83 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE- 83 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH-
T ss_pred eEEEECCcHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchHh-
Confidence 466678887 667777787 68999999999988887776532 1 11 123322 12221
Q ss_pred cCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccceeeeec
Q 039233 143 DAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPV 194 (359)
Q Consensus 143 ~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi 194 (359)
.-..+|+|| |..= -+-++-.+++....+.++|+.++--+..++-+.-+
T Consensus 84 -a~~~ad~Vi-Eav~--E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~i 131 (319)
T 3ado_A 84 -AVEGVVHIQ-ECVP--ENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKL 131 (319)
T ss_dssp -HTTTEEEEE-ECCC--SCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHH
T ss_pred -HhccCcEEe-eccc--cHHHHHHHHHHHHHHHhhhcceeehhhhhccchhh
Confidence 124678877 3221 11123356777778899999887665555444444
No 394
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=57.92 E-value=15 Score=35.74 Aligned_cols=15 Identities=20% Similarity=0.058 Sum_probs=12.7
Q ss_pred HHHHhhccCCCeEEE
Q 039233 169 LDGAQRFLKQDGISI 183 (359)
Q Consensus 169 L~~a~r~Lkp~Gi~I 183 (359)
|..+.+-|+|||+++
T Consensus 208 L~~Ra~eL~pGG~mv 222 (384)
T 2efj_A 208 LRIHSEELISRGRML 222 (384)
T ss_dssp HHHHHHHEEEEEEEE
T ss_pred HHHHHHHhccCCeEE
Confidence 677789999999975
No 395
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=56.96 E-value=14 Score=41.84 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=36.2
Q ss_pred cCCcC--ChhHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccc
Q 039233 84 RVPDE--EASSLTTAAEETGR-KLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMR 140 (359)
Q Consensus 84 ~v~D~--g~Gtl~~~A~~aga-~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~ 140 (359)
+++|+ |+|-++....+||. + .|.|+|.++.|+.+.+.|. .+ ..++.+|++
T Consensus 853 ~viDLFsG~GGlslGfe~AG~~~-vv~avEid~~A~~ty~~N~-----p~-~~~~~~DI~ 905 (1330)
T 3av4_A 853 RTLDVFSGCGGLSEGFHQAGISE-TLWAIEMWDPAAQAFRLNN-----PG-TTVFTEDCN 905 (1330)
T ss_dssp EEEEETCTTSHHHHHHHHTTSEE-EEEEECCSHHHHHHHHHHC-----TT-SEEECSCHH
T ss_pred eEEecccCccHHHHHHHHCCCCc-eEEEEECCHHHHHHHHHhC-----CC-CcEeeccHH
Confidence 36676 66668888889995 4 6899999999988877652 23 346666655
No 396
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=56.48 E-value=19 Score=34.86 Aligned_cols=88 Identities=13% Similarity=0.071 Sum_probs=51.5
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcc------------------
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDM------------------ 139 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~------------------ 139 (359)
++|+=.|+ |. ...+|+..|+ +|+++..++.-.+.+++ .|....+..-..|.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~Ga--~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGGG--IPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchhhhHH
Confidence 35666676 54 3456666774 78899998876665543 33333221111111
Q ss_pred ----ccccCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 140 ----RCWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 140 ----~~~~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
++.. ...+|++|- ..|. +.+..+.+.|+++|.++=-.
T Consensus 296 ~~~v~~~~-g~g~Dvvid-~~G~--------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 296 AKLVVEKA-GREPDIVFE-HTGR--------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHH-SSCCSEEEE-CSCH--------HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHh-CCCceEEEE-CCCc--------hHHHHHHHHHhcCCEEEEEe
Confidence 1112 357999983 4442 36677788999999976543
No 397
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=56.35 E-value=6.6 Score=37.29 Aligned_cols=87 Identities=15% Similarity=0.085 Sum_probs=48.5
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC-ccccc-cCCCCccEEEeccc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC-DMRCW-DAPEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~-d~~~~-~~p~k~DiIVSEll 156 (359)
++|+-.|+|. ...+|+..|+ +|++++.+++-.+.+++ ..|- + .++.. +...+ +....+|+||- ..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~---~lGa-~--~v~~~~~~~~~~~~~~~~D~vid-~~ 259 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGS--KVTVISTSPSKKEEALK---NFGA-D--SFLVSRDQEQMQAAAGTLDGIID-TV 259 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGHHHHHH---TSCC-S--EEEETTCHHHHHHTTTCEEEEEE-CC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH---hcCC-c--eEEeccCHHHHHHhhCCCCEEEE-CC
Confidence 4566667765 3466666774 89999998865544432 2232 2 12221 11111 12247899983 44
Q ss_pred cccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 157 GSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 157 Gs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|. .+ .+..+.+.|+++|.++=-
T Consensus 260 g~---~~----~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 260 SA---VH----PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp SS---CC----CSHHHHHHEEEEEEEEEC
T ss_pred Cc---HH----HHHHHHHHHhcCCEEEEE
Confidence 43 21 234556778999987643
No 398
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=55.88 E-value=4.6 Score=38.17 Aligned_cols=87 Identities=15% Similarity=0.081 Sum_probs=49.4
Q ss_pred ccCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC-ccccc-cCCCCccEEEeccc
Q 039233 83 DRVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC-DMRCW-DAPEKADILVSELL 156 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~-d~~~~-~~p~k~DiIVSEll 156 (359)
++|+-.|+|. ...+|+..|+ +|++++.+++-.+.+++ +.|... ++.. +...+ +....+|+++ |..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~~~~~~~g~D~vi-d~~ 252 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMGH--HVTVISSSNKKREEALQ---DLGADD---YVIGSDQAKMSELADSLDYVI-DTV 252 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSTTHHHHHHT---TSCCSC---EEETTCHHHHHHSTTTEEEEE-ECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHH---HcCCce---eeccccHHHHHHhcCCCCEEE-ECC
Confidence 4566667765 3456666774 89999998865444431 233322 2221 21111 1224689988 344
Q ss_pred cccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 157 GSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 157 Gs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|. . +.+..+.+.|+++|.++=-
T Consensus 253 g~---~----~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 253 PV---H----HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp CS---C----CCSHHHHTTEEEEEEEEEC
T ss_pred CC---h----HHHHHHHHHhccCCEEEEe
Confidence 42 1 2345566789999987643
No 399
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=55.73 E-value=7.5 Score=36.69 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=50.5
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADI 150 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~Di 150 (359)
++|+-.|+ |. +..+|+..|+ +|++++.+++-.+.+++ .|. + .++..+-.++ .....+|+
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~----~ga-~--~~~d~~~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAYGL--KILGTAGTEEGQKIVLQ----NGA-H--EVFNHREVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH----TTC-S--EEEETTSTTHHHHHHHHHCTTCEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHH----cCC-C--EEEeCCCchHHHHHHHHcCCCCcEE
Confidence 35666665 43 4566677773 89999999876655443 232 2 1222211111 11236899
Q ss_pred EEeccccccCCCCChHHHHHHHhhccCCCeEEEccc
Q 039233 151 LVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 151 IVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
+|. ..|. +.+..+.+.|+++|.++--.
T Consensus 243 vi~-~~G~--------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 243 IIE-MLAN--------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEE-SCHH--------HHHHHHHHHEEEEEEEEECC
T ss_pred EEE-CCCh--------HHHHHHHHhccCCCEEEEEe
Confidence 984 3342 25667788999999877443
No 400
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=55.69 E-value=35 Score=30.43 Aligned_cols=82 Identities=12% Similarity=0.046 Sum_probs=48.7
Q ss_pred cCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccCCC
Q 039233 87 DEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFGDN 162 (359)
Q Consensus 87 D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~~~ 162 (359)
=+|+|. ++....+.| .+|++++.+++..+.++ ..+..++ +..|..+. ..+|+||. .+..
T Consensus 5 iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~---~~~D~vi~-av~~---- 67 (279)
T 2f1k_A 5 VVGLGLIGASLAGDLRRRG--HYLIGVSRQQSTCEKAV----ERQLVDE---AGQDLSLL---QTAKIIFL-CTPI---- 67 (279)
T ss_dssp EECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHH----HTTSCSE---EESCGGGG---TTCSEEEE-CSCH----
T ss_pred EEcCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----hCCCCcc---ccCCHHHh---CCCCEEEE-ECCH----
Confidence 368876 444445566 48999999987654443 2333221 23455444 57999985 2221
Q ss_pred CChHHHHHHHhhccCCCeEEEcc
Q 039233 163 ELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 163 El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
....+++......++++.+++-.
T Consensus 68 ~~~~~~~~~l~~~~~~~~~vv~~ 90 (279)
T 2f1k_A 68 QLILPTLEKLIPHLSPTAIVTDV 90 (279)
T ss_dssp HHHHHHHHHHGGGSCTTCEEEEC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEC
Confidence 12455666666778888877643
No 401
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=54.10 E-value=12 Score=36.08 Aligned_cols=92 Identities=13% Similarity=0.136 Sum_probs=48.6
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-cCCCCccEEEecccccc
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-DAPEKADILVSELLGSF 159 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-~~p~k~DiIVSEllGs~ 159 (359)
|+=+|+|. ++..|+..|+ +|+++|.++...+.+++.. +..+.+...+..++ +.-..+|+||. ..+.-
T Consensus 171 V~ViG~G~iG~~~a~~a~~~Ga--~V~~~d~~~~~l~~~~~~~-----g~~~~~~~~~~~~l~~~l~~aDvVi~-~~~~p 242 (377)
T 2vhw_A 171 VVVIGAGTAGYNAARIANGMGA--TVTVLDINIDKLRQLDAEF-----CGRIHTRYSSAYELEGAVKRADLVIG-AVLVP 242 (377)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT-----TTSSEEEECCHHHHHHHHHHCSEEEE-CCCCT
T ss_pred EEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhc-----CCeeEeccCCHHHHHHHHcCCCEEEE-CCCcC
Confidence 44556665 4455666774 8999999997665554422 22222222111111 11136899985 34432
Q ss_pred CCCCChHHH-HHHHhhccCCCeEEEccc
Q 039233 160 GDNELSPEC-LDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 160 ~~~El~~e~-L~~a~r~Lkp~Gi~IP~~ 186 (359)
+. + .+.. .....+.+|+||++|=-+
T Consensus 243 ~~-~-t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 243 GA-K-APKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TS-C-CCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CC-C-CcceecHHHHhcCCCCcEEEEEe
Confidence 21 1 1111 234456789999877443
No 402
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=52.90 E-value=23 Score=33.21 Aligned_cols=120 Identities=17% Similarity=0.248 Sum_probs=58.9
Q ss_pred CCccccCcHHHHHHHhcCcccHHHHHHHHHHh--hc--ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHH
Q 039233 49 QPLMDNLEAQTYETFEKDSVKYIQYQRAIGNA--LV--DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTL 119 (359)
Q Consensus 49 qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~--~~--d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a 119 (359)
-|+-++|+...-..+ -.. -..+|. ++.+. ++ ++|+=.|+ |. ...+|+..|++ .|.+++.++... ..
T Consensus 134 ~~iP~~l~~~~Aa~l-~~~-~~ta~~-~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~-vi~~~~~~~~~~-~~ 208 (357)
T 1zsy_A 134 IQVPSDIPLQSAATL-GVN-PCTAYR-MLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLR-TINVVRDRPDIQ-KL 208 (357)
T ss_dssp EEECSSSCHHHHHHT-TSH-HHHHHH-HHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCE-EEEEECCCSCHH-HH
T ss_pred EECCCCCCHHHHhhh-ccc-HHHHHH-HHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCE-EEEEecCccchH-HH
Confidence 566677765432222 221 124443 33332 22 46777775 54 34667778875 566666554211 11
Q ss_pred HHHHHhcCCCCeEEEEeC------ccccccCC-CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 120 HSLVRLEGWEKTVTIVSC------DMRCWDAP-EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 120 ~~~~~~n~~~~~V~vi~~------d~~~~~~p-~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
++.++..|... ++.. ++.++... ..+|+++ |..|. +.. ..+.+.|+++|.++--
T Consensus 209 ~~~~~~lGa~~---vi~~~~~~~~~~~~~~~~~~~~Dvvi-d~~g~-------~~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 209 SDRLKSLGAEH---VITEEELRRPEMKNFFKDMPQPRLAL-NCVGG-------KSS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp HHHHHHTTCSE---EEEHHHHHSGGGGGTTSSSCCCSEEE-ESSCH-------HHH-HHHHTTSCTTCEEEEC
T ss_pred HHHHHhcCCcE---EEecCcchHHHHHHHHhCCCCceEEE-ECCCc-------HHH-HHHHHhhCCCCEEEEE
Confidence 22233334322 2221 22222211 1489987 34442 222 3467899999987643
No 403
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=52.23 E-value=50 Score=32.81 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=52.3
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHH-HHH----HHHHhcCCC--------CeEEEEeCccccccCCCC
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVV-TLH----SLVRLEGWE--------KTVTIVSCDMRCWDAPEK 147 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~-~a~----~~~~~n~~~--------~~V~vi~~d~~~~~~p~k 147 (359)
|.=+|+|+ ++..++++| ..|+.+|.+++... ..+ +.+++.... ++|+.. .|... -..
T Consensus 57 VaVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl~a---l~~ 130 (460)
T 3k6j_A 57 VAIIGGGTMGKAMAICFGLAG--IETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDFHK---LSN 130 (460)
T ss_dssp EEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCGGG---CTT
T ss_pred EEEECCCHHHHHHHHHHHHCC--CeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCHHH---Hcc
Confidence 34467776 566667777 69999999997211 111 111211111 245543 34332 257
Q ss_pred ccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccc
Q 039233 148 ADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYT 188 (359)
Q Consensus 148 ~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t 188 (359)
+|+||- .+.. +-+...+++......++|+.+++=...+
T Consensus 131 aDlVIe-AVpe--~~~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 131 CDLIVE-SVIE--DMKLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp CSEEEE-CCCS--CHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred CCEEEE-cCCC--CHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 999994 2221 1112345666777889999888644333
No 404
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=52.23 E-value=18 Score=32.42 Aligned_cols=90 Identities=13% Similarity=0.053 Sum_probs=43.4
Q ss_pred CCccccCcHHHHHHHhcCcccHHHHHHHHHHhhccc-CCcCChh--H---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHH
Q 039233 49 QPLMDNLEAQTYETFEKDSVKYIQYQRAIGNALVDR-VPDEEAS--S---LTTAAEETGRKLKIYAVEKNPNAVVTLHSL 122 (359)
Q Consensus 49 qPl~dnL~s~~Ye~f~~D~vry~~Y~~AI~~~~~d~-v~D~g~G--t---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~ 122 (359)
||+.+|+++..+......... ..++++ ++=.|.+ . ++...++.| .+|+.++.++.....+.
T Consensus 2 ~~~~~~~~~~~~~~~~g~~~m---------~~l~gk~vlVTGas~gIG~aia~~la~~G--~~V~~~~r~~~~~~~~~-- 68 (266)
T 3grp_A 2 AHHHHHHMGTLEAQTQGPGSM---------FKLTGRKALVTGATGGIGEAIARCFHAQG--AIVGLHGTREDKLKEIA-- 68 (266)
T ss_dssp -------------------CT---------TCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH--
T ss_pred CCCCccccccccCCCCCCcch---------hccCCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH--
Confidence 667777776665554333221 124443 4444532 2 555556677 48999999886544332
Q ss_pred HHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 123 VRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 123 ~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
+. .+.++.++.+|+++.+. -.++|++|..
T Consensus 69 -~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 108 (266)
T 3grp_A 69 -AD--LGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNN 108 (266)
T ss_dssp -HH--HCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred -HH--hCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 22 35679999999998641 1378999964
No 405
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=52.19 E-value=29 Score=36.49 Aligned_cols=88 Identities=13% Similarity=0.077 Sum_probs=50.8
Q ss_pred CChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-------C---------CCCeEEEEeCccccccCCCC
Q 039233 88 EEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-------G---------WEKTVTIVSCDMRCWDAPEK 147 (359)
Q Consensus 88 ~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-------~---------~~~~V~vi~~d~~~~~~p~k 147 (359)
+|+|+ ++..++++| ..|+.+|.+++.++.+++.++.+ | ...+|+.. .|... -..
T Consensus 318 IGaG~MG~~iA~~la~aG--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~~~---~~~ 391 (725)
T 2wtb_A 318 IGGGLMGSGIATALILSN--YPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDYES---FRD 391 (725)
T ss_dssp ECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSSGG---GTT
T ss_pred EcCCHhhHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCHHH---HCC
Confidence 46675 455556666 58999999998887765543322 1 11235543 34322 257
Q ss_pred ccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 148 ADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 148 ~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
+|+||- .+-. +.+...+++......++|+.+++=
T Consensus 392 aDlVIe-aVpe--~~~vk~~v~~~l~~~~~~~~Ilas 425 (725)
T 2wtb_A 392 VDMVIE-AVIE--NISLKQQIFADLEKYCPQHCILAS 425 (725)
T ss_dssp CSEEEE-CCCS--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEE-cCcC--CHHHHHHHHHHHHhhCCCCcEEEe
Confidence 899984 2211 111123456666778888887653
No 406
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=52.16 E-value=15 Score=34.04 Aligned_cols=84 Identities=14% Similarity=0.216 Sum_probs=50.1
Q ss_pred cCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-------cCCCCccEE
Q 039233 84 RVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-------DAPEKADIL 151 (359)
Q Consensus 84 ~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-------~~p~k~DiI 151 (359)
+|+-.|+ |. +..+|+..|+ +|++++.+++..+.+++. +. + . ++..+-.++ .....+|++
T Consensus 148 ~vlV~Ga~ggiG~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~~----g~-~-~-~~d~~~~~~~~~i~~~~~~~~~d~v 218 (333)
T 1wly_A 148 YVLIHAAAGGMGHIMVPWARHLGA--TVIGTVSTEEKAETARKL----GC-H-H-TINYSTQDFAEVVREITGGKGVDVV 218 (333)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHH----TC-S-E-EEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc----CC-C-E-EEECCCHHHHHHHHHHhCCCCCeEE
Confidence 5666664 32 4566677773 899999998766666542 32 2 1 222211111 112468999
Q ss_pred EeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|. ..|. +.+..+.+.|+++|.++--
T Consensus 219 i~-~~g~--------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 219 YD-SIGK--------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EE-CSCT--------TTHHHHHHTEEEEEEEEEC
T ss_pred EE-CCcH--------HHHHHHHHhhccCCEEEEE
Confidence 84 3442 2566777899999987644
No 407
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=51.71 E-value=18 Score=34.37 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=51.3
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-CCCCccEEEeccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-APEKADILVSELLGS 158 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-~p~k~DiIVSEllGs 158 (359)
+|+=+|+|. ++.+|+..|+ +|++++.+++-.+.+++.... .+.++..+..++. .-..+|+||. ..|.
T Consensus 169 ~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~-~~~~ 240 (361)
T 1pjc_A 169 KVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIG-AVLV 240 (361)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEE-CCCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEE-CCCc
Confidence 355567765 4456667784 899999999776666654322 2333332222221 1136899985 3433
Q ss_pred cCCCCChHHH-HHHHhhccCCCeEEEcccc
Q 039233 159 FGDNELSPEC-LDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 159 ~~~~El~~e~-L~~a~r~Lkp~Gi~IP~~~ 187 (359)
-.. ..+.. .....+.|+++|+++=-.+
T Consensus 241 ~~~--~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 241 PGR--RAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp TTS--SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCC--CCCeecCHHHHhhCCCCCEEEEEec
Confidence 111 01111 2334567899998764433
No 408
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=51.63 E-value=15 Score=33.97 Aligned_cols=112 Identities=16% Similarity=0.171 Sum_probs=59.5
Q ss_pred CCccccCcHHHHHHHhcCcccH-HHHHHHHHHh-hc--ccCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHH
Q 039233 49 QPLMDNLEAQTYETFEKDSVKY-IQYQRAIGNA-LV--DRVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTL 119 (359)
Q Consensus 49 qPl~dnL~s~~Ye~f~~D~vry-~~Y~~AI~~~-~~--d~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a 119 (359)
-|+-++++....-.+ +.-+ .+|. |+..+ ++ ++|+=.| +|. ...+|+..|+ +|+++..++ -.+.+
T Consensus 120 ~~iP~~~~~~~aa~l---~~~~~ta~~-al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga--~vi~~~~~~-~~~~~ 192 (321)
T 3tqh_A 120 IQKLEKLSFLQAASL---PTAGLTALQ-ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT--TVITTASKR-NHAFL 192 (321)
T ss_dssp EECCTTSCHHHHHHS---HHHHHHHHH-HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEECHH-HHHHH
T ss_pred ccCCCCCCHHHHhhh---hhHHHHHHH-HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeccc-hHHHH
Confidence 455677765443322 2222 3443 33332 22 4566665 665 3466677774 789987443 34444
Q ss_pred HHHHHhcCCCCeEEEEeCcccc-c-cCCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 120 HSLVRLEGWEKTVTIVSCDMRC-W-DAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 120 ~~~~~~n~~~~~V~vi~~d~~~-~-~~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
++ .|... ++..+-.+ + +.-..+|+++ |..|. + .+..+.+.|+++|.++
T Consensus 193 ~~----lGa~~---~i~~~~~~~~~~~~~g~D~v~-d~~g~-------~-~~~~~~~~l~~~G~iv 242 (321)
T 3tqh_A 193 KA----LGAEQ---CINYHEEDFLLAISTPVDAVI-DLVGG-------D-VGIQSIDCLKETGCIV 242 (321)
T ss_dssp HH----HTCSE---EEETTTSCHHHHCCSCEEEEE-ESSCH-------H-HHHHHGGGEEEEEEEE
T ss_pred HH----cCCCE---EEeCCCcchhhhhccCCCEEE-ECCCc-------H-HHHHHHHhccCCCEEE
Confidence 43 34432 33322222 1 1114689988 34442 3 3467789999999876
No 409
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=49.98 E-value=95 Score=27.41 Aligned_cols=58 Identities=17% Similarity=0.111 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCCeEEEEeCC------------HHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCcc
Q 039233 93 LTTAAEETGRKLKIYAVEKN------------PNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKAD 149 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n------------~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~D 149 (359)
++...++.| .+|+.++.+ ....+.+.+.++. .+.++.++.+|+++.+- -.++|
T Consensus 26 ia~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 101 (287)
T 3pxx_A 26 HAVKLAEEG--ADIILFDICHDIETNEYPLATSRDLEEAGLEVEK--TGRKAYTAEVDVRDRAAVSRELANAVAEFGKLD 101 (287)
T ss_dssp HHHHHHHTT--CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH--TTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHCC--CeEEEEcccccccccccchhhhHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 555556667 478898876 5444444444443 35679999999998631 13789
Q ss_pred EEEec
Q 039233 150 ILVSE 154 (359)
Q Consensus 150 iIVSE 154 (359)
++|..
T Consensus 102 ~lv~n 106 (287)
T 3pxx_A 102 VVVAN 106 (287)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99964
No 410
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=49.85 E-value=17 Score=33.45 Aligned_cols=84 Identities=18% Similarity=0.149 Sum_probs=48.9
Q ss_pred cCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCc-----cccccCCCCccEEEe
Q 039233 84 RVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCD-----MRCWDAPEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d-----~~~~~~p~k~DiIVS 153 (359)
+|+-.|+ |. ...+|+..|+ +|++++.+++-.+.+++ .|... + +-..+ ++++. ...+|+++
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga--~vi~~~~~~~~~~~~~~----lGa~~-~-i~~~~~~~~~~~~~~-~~~~d~vi- 221 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGY--TVEASTGKAAEHDYLRV----LGAKE-V-LAREDVMAERIRPLD-KQRWAAAV- 221 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC--CEEEEESCTTCHHHHHH----TTCSE-E-EECC---------CC-SCCEEEEE-
T ss_pred eEEEecCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHH----cCCcE-E-EecCCcHHHHHHHhc-CCcccEEE-
Confidence 6777776 54 3466677774 79999998765555543 23322 2 11111 11121 24689887
Q ss_pred ccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 154 ELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 154 EllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|..|. + .+..+.+.|+++|.++--
T Consensus 222 d~~g~----~----~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 222 DPVGG----R----TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp ECSTT----T----THHHHHHTEEEEEEEEEC
T ss_pred ECCcH----H----HHHHHHHhhccCCEEEEE
Confidence 34442 1 466777889999997644
No 411
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=49.42 E-value=44 Score=35.33 Aligned_cols=100 Identities=14% Similarity=0.260 Sum_probs=61.2
Q ss_pred cCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-----------C---CCCeEEEEeCccccccCCCCc
Q 039233 87 DEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-----------G---WEKTVTIVSCDMRCWDAPEKA 148 (359)
Q Consensus 87 D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-----------~---~~~~V~vi~~d~~~~~~p~k~ 148 (359)
-+|+|+ ++..++.+| ..|+-+|.++++++.+++.++.+ . ...+++. ..|..++ ..+
T Consensus 321 ViGaG~MG~gIA~~~a~aG--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l---~~a 394 (742)
T 3zwc_A 321 VLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL---STV 394 (742)
T ss_dssp EECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGGGG---GSC
T ss_pred EEcccHHHHHHHHHHHhCC--CchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHHHH---hhC
Confidence 456776 566667777 79999999999988887766431 0 1122322 2333332 468
Q ss_pred cEEEeccccccCCCCChHHHHHHHhhccCCCeEEEccccceeeeecc
Q 039233 149 DILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPVT 195 (359)
Q Consensus 149 DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~ 195 (359)
|+|| |-+ +.+-++-.+++....+.++|+.|+-=+..++-+.-+.
T Consensus 395 DlVI-EAV--~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia 438 (742)
T 3zwc_A 395 DLVV-EAV--FEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIA 438 (742)
T ss_dssp SEEE-ECC--CSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHH
T ss_pred CEEE-Eec--cccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHH
Confidence 9888 322 1122234567777788999998877666555444443
No 412
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=49.35 E-value=13 Score=34.98 Aligned_cols=60 Identities=17% Similarity=0.206 Sum_probs=39.4
Q ss_pred CCCeEEEE-eCccccc--cCC-CCccEEEeccc---c--ccCC-CC---ChHHHHHHHhhccCCCeEEEcccc
Q 039233 128 WEKTVTIV-SCDMRCW--DAP-EKADILVSELL---G--SFGD-NE---LSPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 128 ~~~~V~vi-~~d~~~~--~~p-~k~DiIVSEll---G--s~~~-~E---l~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
++...+++ ++|..++ .++ +++|+|+...- + .+.. .+ .+.+.|..+.++|||||.++=...
T Consensus 35 ~~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 35 IGTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp -CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 66778898 9999874 233 57999997541 1 1211 11 345677777899999998765443
No 413
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=48.82 E-value=56 Score=28.87 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=42.8
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEecc
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSEL 155 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSEl 155 (359)
++...++.| .+|++++.++...+.+.+.++. .+.++.++.+|+++.+- -.++|++|...
T Consensus 27 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 27 LARRCAEQG--ADLVLAARTVERLEDVAKQVTD--TGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHCc--CEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 555556667 4899999998877666666654 35679999999998641 13789999753
No 414
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=48.79 E-value=8.7 Score=36.24 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=44.3
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEe----------CccccccCCCCccEEEeccccccCCC
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVS----------CDMRCWDAPEKADILVSELLGSFGDN 162 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~----------~d~~~~~~p~k~DiIVSEllGs~~~~ 162 (359)
.+.+..+.... .|.-||-+- +--+.+|+.+. .|+.+-....|+|+|+|++--.....
T Consensus 155 ~~~~~~k~~g~-~vl~v~~~~------------~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~~k~DvV~SDMApn~sGh 221 (320)
T 2hwk_A 155 FSSFVSKLKGR-TVLVVGEKL------------SVPGKMVDWLSDRPEATFRARLDLGIPGDVPKYDIIFVNVRTPYKYH 221 (320)
T ss_dssp CHHHHHTSSCS-EEEEEESCC------------CCTTSEEEEEESSTTCSEECCGGGCSCTTSCCEEEEEEECCCCCCSC
T ss_pred HHHHHhhCCCc-EEEEEeccc------------ccCCceeEeeccCCCceeecccccCCccccCcCCEEEEcCCCCCCCc
Confidence 34555555434 777776332 11345566554 45555444478999999865443322
Q ss_pred C--------C-hHHHHHHHhhccCCCeEEE
Q 039233 163 E--------L-SPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 163 E--------l-~~e~L~~a~r~Lkp~Gi~I 183 (359)
. . +.-.++.|.+.|||||.++
T Consensus 222 ~yqQC~DHarii~Lal~fA~~vLkPGGtfV 251 (320)
T 2hwk_A 222 HYQQCEDHAIKLSMLTKKACLHLNPGGTCV 251 (320)
T ss_dssp HHHHHHHHHHHHHHTHHHHGGGEEEEEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhcCCCceEE
Confidence 1 0 1113355677899999876
No 415
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=48.41 E-value=18 Score=30.27 Aligned_cols=61 Identities=16% Similarity=0.101 Sum_probs=39.0
Q ss_pred ccCCcCChhH----HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc----C--CCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD----A--PEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~----~--p~k~DiI 151 (359)
++|+=+|+|. ++....+. | .+|+++|.|++.+..+++ .| +.++.+|..+.+ . -+++|+|
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG--KISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 3566678886 44444555 6 489999999976554432 22 556778775521 1 3578998
Q ss_pred Ee
Q 039233 152 VS 153 (359)
Q Consensus 152 VS 153 (359)
|.
T Consensus 110 i~ 111 (183)
T 3c85_A 110 LL 111 (183)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 416
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=48.28 E-value=18 Score=35.74 Aligned_cols=91 Identities=18% Similarity=0.230 Sum_probs=50.0
Q ss_pred HhcCcccHHHHHHHHHHhhc--------ccCCcCChhH--HH----HHHHHcCC-CCeEEEEeCCHHHHHHHHHHHHhc-
Q 039233 63 FEKDSVKYIQYQRAIGNALV--------DRVPDEEASS--LT----TAAEETGR-KLKIYAVEKNPNAVVTLHSLVRLE- 126 (359)
Q Consensus 63 f~~D~vry~~Y~~AI~~~~~--------d~v~D~g~Gt--l~----~~A~~aga-~~~V~AVE~n~~a~~~a~~~~~~n- 126 (359)
|..-+.--..|-++|...+. -.++++|.|+ |+ ....+.+. ..+++.||.||...+.-++++...
T Consensus 111 FiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~ 190 (432)
T 4f3n_A 111 FVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQA 190 (432)
T ss_dssp CSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHS
T ss_pred ccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccc
Confidence 44444444555555544331 1467888764 43 33333331 238999999998766655555431
Q ss_pred -CCCCeEEEEeCccccccCCCCcc-EEEe-cccccc
Q 039233 127 -GWEKTVTIVSCDMRCWDAPEKAD-ILVS-ELLGSF 159 (359)
Q Consensus 127 -~~~~~V~vi~~d~~~~~~p~k~D-iIVS-EllGs~ 159 (359)
.+..+|+.... +|+.+. +||+ |+++.+
T Consensus 191 ~~~~~~v~W~~~------lP~~~~g~iiANE~fDAl 220 (432)
T 4f3n_A 191 PGLAARVRWLDA------LPERFEGVVVGNEVLDAM 220 (432)
T ss_dssp TTTGGGEEEESS------CCSCEEEEEEEESCGGGS
T ss_pred cccCCCceeccc------CCccCceEEEeehhhccC
Confidence 24557777542 455544 5554 666664
No 417
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=48.20 E-value=40 Score=30.52 Aligned_cols=59 Identities=10% Similarity=0.057 Sum_probs=43.4
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----------CCCCccEEEecc
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----------APEKADILVSEL 155 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----------~p~k~DiIVSEl 155 (359)
++...++.|+ +|+.++.|++..+.+.+.+++. +.++..+.+|+++-+ --.+.|++|..-
T Consensus 25 ia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 25 YAEGLAAAGA--RVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp HHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECC
Confidence 5666677784 8999999988776666666553 467999999998853 125799999753
No 418
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=47.36 E-value=39 Score=26.15 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=36.8
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccEEEe
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADILVS 153 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIVS 153 (359)
++=+|+|. ++....+.| .+|+++|.++..+..+++ . . .+.++.+|..+.+ ..+++|+||.
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~~~~~~~~---~--~--~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKDICKKASA---E--I--DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH---H--C--SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHH---h--c--CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 44568776 344445556 489999999875543332 1 1 2456778876532 1357999886
No 419
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=47.25 E-value=38 Score=27.31 Aligned_cols=63 Identities=8% Similarity=0.124 Sum_probs=39.3
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCH-HHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccEEEe
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNP-NAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~-~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIVS 153 (359)
+++=+|+|. ++....+.| ..|++||.++ ..++.+++.. ...+.++.+|..+.+ .-+.+|+||.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRG--QNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred cEEEECCCHHHHHHHHHHHHCC--CCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 455568775 444445556 4899999984 4333333221 233789999987642 1357999986
No 420
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=47.21 E-value=53 Score=29.74 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=42.8
Q ss_pred HHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGR-KLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga-~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.|+ ..+|+.+..++...+.+.+.++...-+.++.++.+|+++.+- -.++|++|..
T Consensus 49 ia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 122 (287)
T 3rku_A 49 TALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNN 122 (287)
T ss_dssp HHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEEC
T ss_pred HHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 4444444453 238999999988777666666554345689999999998641 1379999974
No 421
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=47.16 E-value=57 Score=29.08 Aligned_cols=86 Identities=15% Similarity=0.086 Sum_probs=47.9
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCC-CccEEEecccccc
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPE-KADILVSELLGSF 159 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~-k~DiIVSEllGs~ 159 (359)
|.=+|+|. ++...+++|...+|+++|.++...+.++ ..|.... ...|..+ .-. .+|+||. .+..-
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~~---~~~~~~~--~~~~~aDvVil-avp~~ 73 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIIDE---GTTSIAK--VEDFSPDFVML-SSPVR 73 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCSE---EESCGGG--GGGTCCSEEEE-CSCHH
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCccc---ccCCHHH--HhcCCCCEEEE-cCCHH
Confidence 33468876 4444556674338999999987655443 2333221 1233322 224 7899884 22211
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
...+++......|+++.+++-
T Consensus 74 ----~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 74 ----TFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp ----HHHHHHHHHHHHSCTTCEEEE
T ss_pred ----HHHHHHHHHHhhCCCCcEEEE
Confidence 133566655667888877664
No 422
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=46.81 E-value=29 Score=26.04 Aligned_cols=61 Identities=13% Similarity=0.111 Sum_probs=38.8
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc----CCCCccEEEe
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD----APEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~----~p~k~DiIVS 153 (359)
+|+=+|+|. ++....+.|.. +|++++.++.....++ ...++++..|..+.+ .-..+|+||.
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 355567765 44555566644 8999999986554433 123667888877632 2247899996
No 423
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=45.85 E-value=18 Score=33.33 Aligned_cols=77 Identities=9% Similarity=0.103 Sum_probs=45.6
Q ss_pred HHHHHHHHhhcccC-CcCCh--hH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-
Q 039233 72 QYQRAIGNALVDRV-PDEEA--SS---LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA- 144 (359)
Q Consensus 72 ~Y~~AI~~~~~d~v-~D~g~--Gt---l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~- 144 (359)
.|.+-+.+-|++|| +=.|. |. ++...++.|+ +|+.++.+++.++.+. ++ ++.++..+.+|+++.+-
T Consensus 18 ~~~~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~---~~--~g~~~~~~~~Dv~~~~~v 90 (273)
T 4fgs_A 18 LYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAI---AE--IGGGAVGIQADSANLAEL 90 (273)
T ss_dssp -------CTTTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHH---HH--HCTTCEEEECCTTCHHHH
T ss_pred cchhhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHH---HH--cCCCeEEEEecCCCHHHH
Confidence 33333333466664 33343 33 5566667774 8999999987654443 32 35668889999988641
Q ss_pred ----------CCCccEEEecc
Q 039233 145 ----------PEKADILVSEL 155 (359)
Q Consensus 145 ----------p~k~DiIVSEl 155 (359)
-.+.|++|..-
T Consensus 91 ~~~~~~~~~~~G~iDiLVNNA 111 (273)
T 4fgs_A 91 DRLYEKVKAEAGRIDVLFVNA 111 (273)
T ss_dssp HHHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 14799999753
No 424
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=45.73 E-value=30 Score=30.58 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=41.9
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC----------CCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP----------EKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p----------~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.++.. +.++.++.+|+++.+.- .++|++|..
T Consensus 23 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv~n 90 (252)
T 3h7a_A 23 IAKKFAAEG--FTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADAHAPLEVTIFN 90 (252)
T ss_dssp HHHHHHHTT--CEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEEEC
Confidence 555556667 48999999987766666666543 56899999999885310 378999964
No 425
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=45.52 E-value=28 Score=30.02 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=39.2
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----CCCCccEEEe
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----APEKADILVS 153 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----~p~k~DiIVS 153 (359)
|+=+|+|. ++....+.| ..|+++|.|++.+..+.+ . . .+.++.+|..+.+ .-+++|+||.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~l~~---~--~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRK--YGVVIINKDRELCEEFAK---K--L--KATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHH---H--S--SSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHH---H--c--CCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 34467776 444445555 589999999976544332 1 1 2678999988743 1357999986
No 426
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=45.41 E-value=38 Score=30.03 Aligned_cols=60 Identities=12% Similarity=0.048 Sum_probs=40.4
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.+....-+.++.++.+|+++.+- -.++|++|..
T Consensus 29 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~n 99 (267)
T 1iy8_A 29 TAVRLAAEG--AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNN 99 (267)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555555667 48999999987665555444433224579999999988531 1368999974
No 427
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=45.03 E-value=49 Score=30.68 Aligned_cols=62 Identities=11% Similarity=0.107 Sum_probs=38.4
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEe
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVS 153 (359)
+|-=+|+|+ ++..++ +| ..|+.+|.++++++.+.+.+... .-.++++. .|..+ -..+|+||.
T Consensus 14 ~V~vIG~G~MG~~iA~~la-aG--~~V~v~d~~~~~~~~~~~~l~~~-~~~~i~~~-~~~~~---~~~aDlVie 79 (293)
T 1zej_A 14 KVFVIGAGLMGRGIAIAIA-SK--HEVVLQDVSEKALEAAREQIPEE-LLSKIEFT-TTLEK---VKDCDIVME 79 (293)
T ss_dssp EEEEECCSHHHHHHHHHHH-TT--SEEEEECSCHHHHHHHHHHSCGG-GGGGEEEE-SSCTT---GGGCSEEEE
T ss_pred eEEEEeeCHHHHHHHHHHH-cC--CEEEEEECCHHHHHHHHHHHHHH-HhCCeEEe-CCHHH---HcCCCEEEE
Confidence 455678886 444445 65 69999999998887776652111 11245533 44443 257899995
No 428
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=44.47 E-value=21 Score=32.94 Aligned_cols=83 Identities=19% Similarity=0.164 Sum_probs=50.4
Q ss_pred cCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC-c-----cccccCCCCccEEE
Q 039233 84 RVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC-D-----MRCWDAPEKADILV 152 (359)
Q Consensus 84 ~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~-d-----~~~~~~p~k~DiIV 152 (359)
+|+-.|+ |. ...+|+..|+ +|++++.+++-.+.+++ .|... + +.. + ++++. ...+|+++
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga--~vi~~~~~~~~~~~~~~----lGa~~-v--~~~~~~~~~~~~~~~-~~~~d~vi 222 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGY--DVVASTGNREAADYLKQ----LGASE-V--ISREDVYDGTLKALS-KQQWQGAV 222 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTC--CEEEEESSSSTHHHHHH----HTCSE-E--EEHHHHCSSCCCSSC-CCCEEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH----cCCcE-E--EECCCchHHHHHHhh-cCCccEEE
Confidence 6777776 54 3466677784 79999998766666654 23322 2 221 1 11121 24689887
Q ss_pred eccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 153 SELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 153 SEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
- ..|. +.+..+.+.|+++|.++--
T Consensus 223 d-~~g~--------~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 223 D-PVGG--------KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp E-SCCT--------HHHHHHHTTEEEEEEEEEC
T ss_pred E-CCcH--------HHHHHHHHhhcCCCEEEEE
Confidence 3 4441 2677788899999997643
No 429
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=44.38 E-value=69 Score=27.71 Aligned_cols=58 Identities=10% Similarity=0.125 Sum_probs=41.7
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-----------CCCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-----------APEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-----------~p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.++.. +.++.++.+|+++.+ .-.++|++|..
T Consensus 21 ~a~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ 89 (247)
T 3lyl_A 21 VAHALASKG--ATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNN 89 (247)
T ss_dssp HHHHHHHTT--CEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555555667 48999999987776666666543 457999999998853 12368999964
No 430
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=44.27 E-value=34 Score=35.88 Aligned_cols=91 Identities=11% Similarity=0.109 Sum_probs=52.5
Q ss_pred CcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-------CC-C--------CeEEEEeCccccccCC
Q 039233 86 PDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-------GW-E--------KTVTIVSCDMRCWDAP 145 (359)
Q Consensus 86 ~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-------~~-~--------~~V~vi~~d~~~~~~p 145 (359)
-=+|+|+ ++...+++| ..|+.+|.+++.++.++..++.+ |. . .+|+.. .|.. .-
T Consensus 318 ~VIGaG~MG~~iA~~la~aG--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~~---~~ 391 (715)
T 1wdk_A 318 AVLGAGIMGGGIAYQSASKG--TPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPT-LSYG---DF 391 (715)
T ss_dssp EEECCHHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEE-SSST---TG
T ss_pred EEECCChhhHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEE-CCHH---HH
Confidence 3467886 555566777 58999999998877655433221 11 0 135543 3332 23
Q ss_pred CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 146 EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 146 ~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
..+|+||. .+-. +.+...+++......++++.+++=.
T Consensus 392 ~~aDlVIe-aV~e--~~~vk~~v~~~l~~~~~~~~Ilasn 428 (715)
T 1wdk_A 392 GNVDLVVE-AVVE--NPKVKQAVLAEVENHVREDAILASN 428 (715)
T ss_dssp GGCSEEEE-CCCS--CHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred CCCCEEEE-cCCC--CHHHHHHHHHHHHhhCCCCeEEEeC
Confidence 57899984 2211 1111234566667788888877533
No 431
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=44.27 E-value=27 Score=33.18 Aligned_cols=92 Identities=13% Similarity=0.178 Sum_probs=48.1
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-CCCCccEEEecccccc
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-APEKADILVSELLGSF 159 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-~p~k~DiIVSEllGs~ 159 (359)
|+=+|+|. ++..++..|+ +|+++|.++...+.+++. .+..+.....+..++. .-..+|+||. ..|.-
T Consensus 169 V~ViGaG~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~-----~g~~~~~~~~~~~~l~~~~~~~DvVi~-~~g~~ 240 (369)
T 2eez_A 169 VVILGGGTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDV-----FGGRVITLTATEANIKKSVQHADLLIG-AVLVP 240 (369)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH-----TTTSEEEEECCHHHHHHHHHHCSEEEE-CCC--
T ss_pred EEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHh-----cCceEEEecCCHHHHHHHHhCCCEEEE-CCCCC
Confidence 34456665 4566667774 899999998765554432 2223433322222221 1136899985 44432
Q ss_pred CCCCChHH-HHHHHhhccCCCeEEEccc
Q 039233 160 GDNELSPE-CLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 160 ~~~El~~e-~L~~a~r~Lkp~Gi~IP~~ 186 (359)
.. ..+. +...+.+.+|++|++|=-+
T Consensus 241 ~~--~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 241 GA--KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC
T ss_pred cc--ccchhHHHHHHHhhcCCCEEEEEe
Confidence 10 0111 1244456789999876444
No 432
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=44.04 E-value=75 Score=28.43 Aligned_cols=86 Identities=13% Similarity=0.132 Sum_probs=47.5
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
+|.=+|+|. ++....++|...+|+++|.++...+.+++ .+..+ ....|..+. -..+|+||. .+..
T Consensus 8 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~---~~~~~~~~~--~~~aDvVil-avp~- 76 (290)
T 3b1f_A 8 TIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD---EATADFKVF--AALADVIIL-AVPI- 76 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS---EEESCTTTT--GGGCSEEEE-CSCH-
T ss_pred eEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc---cccCCHHHh--hcCCCEEEE-cCCH-
Confidence 345568876 33444455433589999999876554432 23322 122333321 247899884 1221
Q ss_pred CCCCChHHHHHHHhhc-cCCCeEEE
Q 039233 160 GDNELSPECLDGAQRF-LKQDGISI 183 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~-Lkp~Gi~I 183 (359)
....+++...... |+++.+++
T Consensus 77 ---~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 77 ---KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ---HHHHHHHHHHHTSCCCTTCEEE
T ss_pred ---HHHHHHHHHHHhcCCCCCCEEE
Confidence 1124566666667 88887776
No 433
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=43.78 E-value=38 Score=29.33 Aligned_cols=58 Identities=17% Similarity=0.250 Sum_probs=39.4
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++. .+.++.++.+|+++.+. -.++|+||..
T Consensus 27 la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ 95 (255)
T 1fmc_A 27 IAITFATAG--ASVVVSDINADAANHVVDEIQQ--LGGQAFACRCDITSEQELSALADFAISKLGKVDILVNN 95 (255)
T ss_dssp HHHHHHTTT--CEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHH--hCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 555555566 4899999998766555554443 34579999999987531 0278999963
No 434
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=43.69 E-value=36 Score=30.27 Aligned_cols=59 Identities=17% Similarity=0.210 Sum_probs=41.7
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.+... .+.++..+.+|+.+.+. -.++|++|..
T Consensus 36 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 105 (266)
T 4egf_A 36 IARAFAAAG--ARLVLSGRDVSELDAARRALGEQ-FGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNN 105 (266)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH-HCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEE
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555556677 48999999987766655555431 34679999999998642 1378999964
No 435
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=43.62 E-value=7.9 Score=35.02 Aligned_cols=52 Identities=13% Similarity=0.098 Sum_probs=33.2
Q ss_pred EEEEeCccccc--cC-CCCccEEEeccc---ccc-CCC--------CChHHHHHHHhhccCCCeEEE
Q 039233 132 VTIVSCDMRCW--DA-PEKADILVSELL---GSF-GDN--------ELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 132 V~vi~~d~~~~--~~-p~k~DiIVSEll---Gs~-~~~--------El~~e~L~~a~r~Lkp~Gi~I 183 (359)
.+++++|+.++ .+ .+++|+|+...- +.- -++ +.+.+.|..+.+.|||+|.++
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~ 71 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLY 71 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 45788888764 23 357999997542 200 011 134567777889999999864
No 436
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=43.34 E-value=53 Score=29.00 Aligned_cols=58 Identities=14% Similarity=0.249 Sum_probs=41.9
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.+++....+.+.+.. .+.++.++.+|+.+.+- -.++|++|..
T Consensus 45 la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~ 113 (262)
T 3rkr_A 45 IARKLGSLG--ARVVLTARDVEKLRAVEREIVA--AGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNN 113 (262)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH--TTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEECCHHHHHHHHHHHHH--hCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 555555667 4799999998877666666654 35679999999988641 1368999964
No 437
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=43.06 E-value=25 Score=32.16 Aligned_cols=86 Identities=22% Similarity=0.256 Sum_probs=46.2
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
+|.=+|+|. ++...+++| .+|++++.+++.++.+.+ .|. .....+..+. -..+|+||.= +..
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~----~g~----~~~~~~~~e~--~~~aDvvi~~-vp~- 74 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAG--LSTWGADLNPQACANLLA----EGA----CGAAASAREF--AGVVDALVIL-VVN- 74 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH----TTC----SEEESSSTTT--TTTCSEEEEC-CSS-
T ss_pred eEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHH----cCC----ccccCCHHHH--HhcCCEEEEE-CCC-
Confidence 345568876 444455666 589999999976555443 222 1123344332 2468999852 221
Q ss_pred CCCCChHHHH---HHHhhccCCCeEEEcc
Q 039233 160 GDNELSPECL---DGAQRFLKQDGISIPS 185 (359)
Q Consensus 160 ~~~El~~e~L---~~a~r~Lkp~Gi~IP~ 185 (359)
.....+++ ......|+++.++|=.
T Consensus 75 --~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 75 --AAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp --HHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred --HHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 11122333 2223567788777633
No 438
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=42.90 E-value=38 Score=29.84 Aligned_cols=57 Identities=16% Similarity=0.154 Sum_probs=39.6
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.|+..+|+++..++...+.+.+.. +.++.++.+|+++.+. -.++|++|..
T Consensus 18 ia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnn 85 (254)
T 3kzv_A 18 IVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVAN 85 (254)
T ss_dssp HHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred HHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEEC
Confidence 4544455666569999999987655444332 4679999999998631 1378999974
No 439
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=42.89 E-value=1.2e+02 Score=27.13 Aligned_cols=58 Identities=14% Similarity=0.089 Sum_probs=38.2
Q ss_pred HHHHHHHcCCCCeEEEEeCCHH-HHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPN-AVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~-a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|+.++.++. ..+.+.+.++. .+.++.++.+|+++.+. -.++|++|..
T Consensus 63 ia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 132 (291)
T 3ijr_A 63 VSIAFAKEG--ANIAIAYLDEEGDANETKQYVEK--EGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNN 132 (291)
T ss_dssp HHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHT--TTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCchHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555556677 47888888754 33334444433 45679999999998531 1378999974
No 440
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=42.68 E-value=21 Score=34.13 Aligned_cols=86 Identities=15% Similarity=0.165 Sum_probs=48.8
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-cCCCCccEEEeccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-DAPEKADILVSELLGS 158 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-~~p~k~DiIVSEllGs 158 (359)
+|.=+|+|. ++...+++| .+|++++.++..++.+.+ .+. + ...+..++ ...+++|+||. .+..
T Consensus 24 kIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~~~~~~l~~----~g~----~-~~~s~~e~~~~a~~~DvVi~-~vp~ 91 (358)
T 4e21_A 24 QIGMIGLGRMGADMVRRLRKGG--HECVVYDLNVNAVQALER----EGI----A-GARSIEEFCAKLVKPRVVWL-MVPA 91 (358)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHT----TTC----B-CCSSHHHHHHHSCSSCEEEE-CSCG
T ss_pred EEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHH----CCC----E-EeCCHHHHHhcCCCCCEEEE-eCCH
Confidence 455568886 444455666 589999999876544332 221 1 11222222 11124499885 2222
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
. ...+++......|++|.++|=.
T Consensus 92 ---~-~v~~vl~~l~~~l~~g~iiId~ 114 (358)
T 4e21_A 92 ---A-VVDSMLQRMTPLLAANDIVIDG 114 (358)
T ss_dssp ---G-GHHHHHHHHGGGCCTTCEEEEC
T ss_pred ---H-HHHHHHHHHHhhCCCCCEEEeC
Confidence 1 3556777777788888777643
No 441
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=42.61 E-value=46 Score=29.41 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=41.8
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|+.++.++...+.+.+.++. .+.++..+.+|+++.+. -.++|++|..
T Consensus 28 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~n 96 (256)
T 3gaf_A 28 IAGTFAKAG--ASVVVTDLKSEGAEAVAAAIRQ--AGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNN 96 (256)
T ss_dssp HHHHHHHHT--CEEEEEESSHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555555667 4799999998777666666654 35679999999998641 1378999974
No 442
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=42.53 E-value=65 Score=28.53 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=40.6
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++. .+.++.++.+|+.+.+. -.++|+||..
T Consensus 47 la~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~ 115 (272)
T 1yb1_A 47 TAYEFAKLK--SKLVLWDINKHGLEETAAKCKG--LGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNN 115 (272)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEEcCHHHHHHHHHHHHh--cCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEEC
Confidence 555555667 4899999998766655555544 34579999999988531 1378999974
No 443
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=42.31 E-value=64 Score=28.55 Aligned_cols=60 Identities=17% Similarity=0.168 Sum_probs=42.4
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc-------CCCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD-------APEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~-------~p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.+...+-+.++..+.+|+.+.+ --.++|++|..
T Consensus 26 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~n 92 (267)
T 3t4x_A 26 IATSLVAEG--ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILINN 92 (267)
T ss_dssp HHHHHHHTT--CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 555556667 4899999998776665555555444567899999998753 12478999974
No 444
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=42.26 E-value=70 Score=30.01 Aligned_cols=85 Identities=8% Similarity=-0.012 Sum_probs=48.5
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc------CCCCccEE
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD------APEKADIL 151 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~------~p~k~DiI 151 (359)
++|+=.|+ |. ...+|+..|+ +|+++- ++.-.+.|+ ..|. + .++..+-.++. .+.++|++
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~Ga--~Vi~~~-~~~~~~~~~----~lGa-~--~vi~~~~~~~~~~v~~~t~g~~d~v 235 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSGY--IPIATC-SPHNFDLAK----SRGA-E--EVFDYRAPNLAQTIRTYTKNNLRYA 235 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEE-CGGGHHHHH----HTTC-S--EEEETTSTTHHHHHHHHTTTCCCEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCC--EEEEEe-CHHHHHHHH----HcCC-c--EEEECCCchHHHHHHHHccCCccEE
Confidence 35665665 43 3466677774 788884 765544443 3343 2 23332222211 23459998
Q ss_pred EeccccccCCCCChHHHHHHHhhcc-CCCeEEEcc
Q 039233 152 VSELLGSFGDNELSPECLDGAQRFL-KQDGISIPS 185 (359)
Q Consensus 152 VSEllGs~~~~El~~e~L~~a~r~L-kp~Gi~IP~ 185 (359)
+ |..| .++.+..+.+.| +++|.++--
T Consensus 236 ~-d~~g-------~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 236 L-DCIT-------NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp E-ESSC-------SHHHHHHHHHHSCTTCEEEEES
T ss_pred E-ECCC-------chHHHHHHHHHhhcCCCEEEEE
Confidence 8 3444 345777888888 699987643
No 445
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=41.86 E-value=21 Score=33.42 Aligned_cols=88 Identities=13% Similarity=0.233 Sum_probs=44.8
Q ss_pred ccCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeC------cc----cccc--CC
Q 039233 83 DRVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSC------DM----RCWD--AP 145 (359)
Q Consensus 83 d~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~------d~----~~~~--~p 145 (359)
++|+=.|+ |. ...+|+..|+ +|+++..+++.....++.+++.|... ++.. |. +++. ..
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga--~vi~~~~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNF--NSISVIRDRPNLDEVVASLKELGATQ---VITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTC--EEEEEECCCTTHHHHHHHHHHHTCSE---EEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCC--EEEEEecCccccHHHHHHHHhcCCeE---EEecCccchHHHHHHHHHHhhccC
Confidence 55666675 54 3466666775 66676544332111122223334322 2221 11 1111 13
Q ss_pred CCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 146 EKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 146 ~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
..+|+++ |..|. +... .+.+.|+++|.++=
T Consensus 244 ~g~Dvvi-d~~G~-------~~~~-~~~~~l~~~G~~v~ 273 (364)
T 1gu7_A 244 GEAKLAL-NCVGG-------KSST-GIARKLNNNGLMLT 273 (364)
T ss_dssp CCEEEEE-ESSCH-------HHHH-HHHHTSCTTCEEEE
T ss_pred CCceEEE-ECCCc-------hhHH-HHHHHhccCCEEEE
Confidence 4689998 34442 3333 56789999998764
No 446
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=41.83 E-value=53 Score=29.07 Aligned_cols=60 Identities=17% Similarity=0.062 Sum_probs=41.6
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.+....-+.++..+.+|+++.+- -.++|++|..
T Consensus 24 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnn 94 (265)
T 3lf2_A 24 TVELLLEAG--AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNN 94 (265)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555556667 47999999987776666655542223459999999998531 1378999974
No 447
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=41.51 E-value=53 Score=28.90 Aligned_cols=58 Identities=19% Similarity=0.259 Sum_probs=40.1
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc------------CCCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD------------APEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~------------~p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++. .+.++.++.+|+++.+ ...++|++|..
T Consensus 25 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~ 94 (260)
T 2ae2_A 25 IVEELASLG--ASVYTCSRNQKELNDCLTQWRS--KGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNN 94 (260)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH--TTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEEC
Confidence 555555667 4899999998766554444443 2467999999998853 11579999974
No 448
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=41.23 E-value=1e+02 Score=29.16 Aligned_cols=114 Identities=15% Similarity=0.113 Sum_probs=68.5
Q ss_pred ccHHHHHHHHHHhhcc-----cCCcCChhH--HH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC------------
Q 039233 68 VKYIQYQRAIGNALVD-----RVPDEEASS--LT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG------------ 127 (359)
Q Consensus 68 vry~~Y~~AI~~~~~d-----~v~D~g~Gt--l~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~------------ 127 (359)
+|+....+.|.+.+.. .|+-+|||. .. ++........++|=||.-+ .++.=++.+...+
T Consensus 72 ~Rt~~iD~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~-vi~~K~~~l~~~~~l~~~lg~~~~~ 150 (334)
T 3iei_A 72 ARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPM-IVTRKLHSIKCKPPLSSPILELHSE 150 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHH-HHHHHHHHHHHCHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHH-HHHHHHHHHhhchhhhhhhcccccc
Confidence 5777777777776641 478899996 32 3322211346888888743 3333222233210
Q ss_pred ----------CCCeEEEEeCcccccc-----------CCCCccEEEeccccccCCCCChHHHHHHHhhccCCCeEEE
Q 039233 128 ----------WEKTVTIVSCDMRCWD-----------APEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 128 ----------~~~~V~vi~~d~~~~~-----------~p~k~DiIVSEllGs~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
-.++.+.|.+|+++.. .+...=++|+|-+=..+..+....+|..+.+.. ++|.+|
T Consensus 151 ~~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i 226 (334)
T 3iei_A 151 DTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFI 226 (334)
T ss_dssp SSCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred cccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEE
Confidence 1467999999999841 124456888987666666666666777765444 556555
No 449
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=41.12 E-value=80 Score=29.89 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=47.1
Q ss_pred HHhhcc-cCCcCChhH----HHHHHHHcCCCCeEEEEeCCH--------------------HHHHHHHHHHHhcCCCCeE
Q 039233 78 GNALVD-RVPDEEASS----LTTAAEETGRKLKIYAVEKNP--------------------NAVVTLHSLVRLEGWEKTV 132 (359)
Q Consensus 78 ~~~~~d-~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~--------------------~a~~~a~~~~~~n~~~~~V 132 (359)
.+.++. +|+=+|+|. ++...+++|.. +++-||.+. .+ +.|++.++.-+-.-+|
T Consensus 113 q~~L~~~~VlvvG~GglGs~va~~La~aGvg-~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka-~~~~~~l~~~np~v~v 190 (353)
T 3h5n_A 113 QDKLKNAKVVILGCGGIGNHVSVILATSGIG-EIILIDNDQIENTNLTRQVLFSEDDVGKNKT-EVIKRELLKRNSEISV 190 (353)
T ss_dssp HHHHHTCEEEEECCSHHHHHHHHHHHHHTCS-EEEEEECCBCCGGGGGTCTTCCGGGTTSBHH-HHHHHHHHHHCTTSEE
T ss_pred HHHHhCCeEEEECCCHHHHHHHHHHHhCCCC-eEEEECCCcCcccccccccCCChHHCCChHH-HHHHHHHHHHCCCCeE
Confidence 334443 688888875 55666788987 999999752 33 3445555443344568
Q ss_pred EEEeCcccccc-C--CCCccEEEe
Q 039233 133 TIVSCDMRCWD-A--PEKADILVS 153 (359)
Q Consensus 133 ~vi~~d~~~~~-~--p~k~DiIVS 153 (359)
+.+..++.+.. + -..+|+||.
T Consensus 191 ~~~~~~i~~~~~~~~~~~~DlVvd 214 (353)
T 3h5n_A 191 SEIALNINDYTDLHKVPEADIWVV 214 (353)
T ss_dssp EEEECCCCSGGGGGGSCCCSEEEE
T ss_pred EEeecccCchhhhhHhccCCEEEE
Confidence 88887765432 1 257999984
No 450
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=40.75 E-value=37 Score=31.98 Aligned_cols=86 Identities=12% Similarity=0.036 Sum_probs=46.8
Q ss_pred ccCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc----cCCCCccEEEe
Q 039233 83 DRVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW----DAPEKADILVS 153 (359)
Q Consensus 83 d~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~----~~p~k~DiIVS 153 (359)
++|+=.| +|. ...+|+..|+ +|++++ ++.-.+.++ +.|. + .++..+-.++ .-...+|+++
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~Ga--~Vi~~~-~~~~~~~~~----~lGa-~--~v~~~~~~~~~~~~~~~~g~D~vi- 253 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWDA--HVTAVC-SQDASELVR----KLGA-D--DVIDYKSGSVEEQLKSLKPFDFIL- 253 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEE-CGGGHHHHH----HTTC-S--EEEETTSSCHHHHHHTSCCBSEEE-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEe-ChHHHHHHH----HcCC-C--EEEECCchHHHHHHhhcCCCCEEE-
Confidence 3566666 554 3466667774 799998 554444443 3332 2 1232221111 1114689988
Q ss_pred ccccccCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 154 ELLGSFGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 154 EllGs~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
|..|. ....+..+.+.|+++|.++--
T Consensus 254 d~~g~------~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 254 DNVGG------STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp ESSCT------THHHHGGGGBCSSSCCEEEES
T ss_pred ECCCC------hhhhhHHHHHhhcCCcEEEEe
Confidence 34442 112456667889999987643
No 451
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=40.71 E-value=31 Score=31.04 Aligned_cols=68 Identities=10% Similarity=0.070 Sum_probs=42.5
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCC--------------------HHHHHHHHHHHHhcCCCCeEEEEeCcc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKN--------------------PNAVVTLHSLVRLEGWEKTVTIVSCDM 139 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n--------------------~~a~~~a~~~~~~n~~~~~V~vi~~d~ 139 (359)
+|+=+|+|. ++...+++|.+ +++-+|.+ +.+ +.+++++++-+-.-+|+.+..++
T Consensus 30 ~VlvvG~GglG~~va~~La~~Gvg-~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka-~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 30 QVLIIGLGGLGTPAALYLAGAGVG-TLVLADDDDVHLSNLQRQILFTTEDIDRPKS-QVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCS-EEEEECCCBCCGGGTTTCTTCCGGGTTSBHH-HHHHHHHHHHCTTSEEEEECSCC
T ss_pred cEEEEccCHHHHHHHHHHHHcCCC-eEEEEeCCCcccccCCCCccCChhhCCCHHH-HHHHHHHHHHCCCCEEEEEeccC
Confidence 577778764 66677788987 99998764 333 44455554433444677777655
Q ss_pred cccc---CCCCccEEEe
Q 039233 140 RCWD---APEKADILVS 153 (359)
Q Consensus 140 ~~~~---~p~k~DiIVS 153 (359)
.+-. .-..+|+||.
T Consensus 108 ~~~~~~~~~~~~DvVi~ 124 (251)
T 1zud_1 108 TGEALKDAVARADVVLD 124 (251)
T ss_dssp CHHHHHHHHHHCSEEEE
T ss_pred CHHHHHHHHhcCCEEEE
Confidence 4311 1236899995
No 452
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=40.61 E-value=58 Score=28.97 Aligned_cols=58 Identities=19% Similarity=0.252 Sum_probs=40.4
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc------------CCCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD------------APEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~------------~p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.++. .+.++.++.+|+.+.+ ...++|++|..
T Consensus 37 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~n 106 (273)
T 1ae1_A 37 IVEELAGLG--ARVYTCSRNEKELDECLEIWRE--KGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNN 106 (273)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 555556667 4899999998766555544443 2456999999998753 11579999974
No 453
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=40.10 E-value=63 Score=28.78 Aligned_cols=60 Identities=13% Similarity=0.143 Sum_probs=41.5
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcC-CCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEG-WEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~-~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++..+ ...++.++.+|+++.+- -.++|++|..
T Consensus 27 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 98 (281)
T 3svt_A 27 VAAGLVAAG--ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHC 98 (281)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555555667 489999999877666666555432 22389999999998531 1378999974
No 454
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=39.76 E-value=53 Score=28.73 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=40.3
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.++. .+.++.++.+|+.+.+. -.++|++|..
T Consensus 23 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~n 91 (247)
T 2jah_A 23 TARALAAEG--AAVAIAARRVEKLRALGDELTA--AGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNN 91 (247)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEECCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555555667 4899999998766655555543 24579999999988531 1378999974
No 455
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=39.40 E-value=4.9 Score=38.03 Aligned_cols=84 Identities=10% Similarity=0.023 Sum_probs=48.0
Q ss_pred ccCCcCChhH----HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCc------cccccCCCCccEE
Q 039233 83 DRVPDEEASS----LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCD------MRCWDAPEKADIL 151 (359)
Q Consensus 83 d~v~D~g~Gt----l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d------~~~~~~p~k~DiI 151 (359)
++|+=.|+|. ...+|+.. |+ +|++++.+++-.+.|++ .|... ++..+ ++++.....+|++
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~~Ga--~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~v~~~~~g~g~Dvv 258 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVMTPA--TVIALDVKEEKLKLAER----LGADH---VVDARRDPVKQVMELTRGRGVNVA 258 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCC--EEEEEESSHHHHHHHHH----TTCSE---EEETTSCHHHHHHHHTTTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC--eEEEEeCCHHHHHHHHH----hCCCE---EEeccchHHHHHHHHhCCCCCcEE
Confidence 4677677765 34556666 74 89999999876655543 33222 23221 1222223369999
Q ss_pred EeccccccCCCCChHH--HHHHHhhccCCCeEEEcc
Q 039233 152 VSELLGSFGDNELSPE--CLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 152 VSEllGs~~~~El~~e--~L~~a~r~Lkp~Gi~IP~ 185 (359)
+ |..|. ++ .+..+.+. ++|.++--
T Consensus 259 i-d~~G~-------~~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 259 M-DFVGS-------QATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp E-ESSCC-------HHHHHHGGGGEE--EEEEEEEC
T ss_pred E-ECCCC-------chHHHHHHHhhc--CCCEEEEE
Confidence 8 34442 33 55555555 88887643
No 456
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=39.30 E-value=79 Score=28.24 Aligned_cols=57 Identities=12% Similarity=0.089 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc--------C---CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD--------A---PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~--------~---p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.+.. . .++.++.+|+.+.+ . -.++|++|..
T Consensus 37 ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 104 (272)
T 2nwq_A 37 CARRFAEAG--WSLVLTGRREERLQALAGELSA-K--TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINN 104 (272)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHTT-T--SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEECCHHHHHHHHHHhhc-C--CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 565556667 4899999998765554444432 1 46999999998853 1 1367999974
No 457
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=39.19 E-value=59 Score=29.13 Aligned_cols=58 Identities=21% Similarity=0.292 Sum_probs=41.6
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.++. .+.++.++.+|+++.+- -.++|++|..
T Consensus 40 ia~~la~~G--~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~n 108 (279)
T 3sju_A 40 VARTLAARG--IAVYGCARDAKNVSAAVDGLRA--AGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNS 108 (279)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHT--TTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEEC
Confidence 555555667 4899999998776666665553 35679999999998531 1378999974
No 458
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=39.14 E-value=49 Score=32.65 Aligned_cols=90 Identities=10% Similarity=0.139 Sum_probs=47.7
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-cCCCCccEEEecccccc
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-DAPEKADILVSELLGSF 159 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-~~p~k~DiIVSEllGs~ 159 (359)
|.=+|+|. ++...+++| .+|++++.+++.++.+.+... +..++ ...+..++ .-.+++|+||. .+..
T Consensus 8 IgvIG~G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~----~~gi~-~~~s~~e~v~~l~~aDvVil-avp~- 78 (474)
T 2iz1_A 8 FGVVGMAVMGKNLALNVESRG--YTVAIYNRTTSKTEEVFKEHQ----DKNLV-FTKTLEEFVGSLEKPRRIML-MVQA- 78 (474)
T ss_dssp EEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHTT----TSCEE-ECSSHHHHHHTBCSSCEEEE-CCCT-
T ss_pred EEEEeeHHHHHHHHHHHHhCC--CEEEEEcCCHHHHHHHHHhCc----CCCeE-EeCCHHHHHhhccCCCEEEE-EccC-
Confidence 44568876 444445666 479999999876555443211 11243 23344442 11135888884 1211
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
.....+++......|++|.++|-.
T Consensus 79 --~~~v~~vl~~l~~~l~~g~iiId~ 102 (474)
T 2iz1_A 79 --GAATDATIKSLLPLLDIGDILIDG 102 (474)
T ss_dssp --THHHHHHHHHHGGGCCTTCEEEEC
T ss_pred --chHHHHHHHHHHhhCCCCCEEEEC
Confidence 112344555555677777776643
No 459
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=38.70 E-value=67 Score=28.35 Aligned_cols=88 Identities=14% Similarity=0.118 Sum_probs=50.2
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEecccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSF 159 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~ 159 (359)
+|.=+|+|. ++...+++|.+ .|+.++.+++..+.+.+. ++ +++ ..+..+. -+.+|+||.= +..
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~-~v~~~~~~~~~~~~~~~~-----~g--~~~-~~~~~~~--~~~~Dvvi~a-v~~- 78 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFR-IVQVYSRTEESARELAQK-----VE--AEY-TTDLAEV--NPYAKLYIVS-LKD- 78 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCC-EEEEECSSHHHHHHHHHH-----TT--CEE-ESCGGGS--CSCCSEEEEC-CCH-
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCe-EEEEEeCCHHHHHHHHHH-----cC--Cce-eCCHHHH--hcCCCEEEEe-cCH-
Confidence 455578886 44444566743 499999998765444332 11 222 3344332 2478999852 221
Q ss_pred CCCCChHHHHHHHhhccCCCeEEEcccc
Q 039233 160 GDNELSPECLDGAQRFLKQDGISIPSSY 187 (359)
Q Consensus 160 ~~~El~~e~L~~a~r~Lkp~Gi~IP~~~ 187 (359)
. ...+++......++++.+++-.+.
T Consensus 79 --~-~~~~v~~~l~~~~~~~~ivv~~s~ 103 (266)
T 3d1l_A 79 --S-AFAELLQGIVEGKREEALMVHTAG 103 (266)
T ss_dssp --H-HHHHHHHHHHTTCCTTCEEEECCT
T ss_pred --H-HHHHHHHHHHhhcCCCcEEEECCC
Confidence 1 135566666677888877665443
No 460
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=38.70 E-value=79 Score=28.56 Aligned_cols=57 Identities=19% Similarity=0.167 Sum_probs=39.9
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|+++..++...+.+++..+.. .++.++.+|+.+.+- -.++|++|..
T Consensus 49 ia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 116 (293)
T 3grk_A 49 IAKAAREAG--AELAFTYQGDALKKRVEPLAEEL---GAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHA 116 (293)
T ss_dssp HHHHHHHTT--CEEEEEECSHHHHHHHHHHHHHH---TCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 556666777 47999999976666666555443 258899999998631 1478999964
No 461
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=38.64 E-value=53 Score=32.57 Aligned_cols=91 Identities=10% Similarity=0.150 Sum_probs=49.2
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccc-cCCCCccEEEeccccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCW-DAPEKADILVSELLGS 158 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~-~~p~k~DiIVSEllGs 158 (359)
+|.=+|+|. ++...+++| .+|++++.+++.++.+.+.. + +..++. ..+..+. .--+++|+||. .+.
T Consensus 17 ~IgvIGlG~MG~~lA~~La~~G--~~V~v~~r~~~~~~~l~~~~---~-~~gi~~-~~s~~e~v~~l~~aDvVil-~Vp- 87 (480)
T 2zyd_A 17 QIGVVGMAVMGRNLALNIESRG--YTVSIFNRSREKTEEVIAEN---P-GKKLVP-YYTVKEFVESLETPRRILL-MVK- 87 (480)
T ss_dssp SEEEECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHS---T-TSCEEE-CSSHHHHHHTBCSSCEEEE-CSC-
T ss_pred eEEEEccHHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHhhC---C-CCCeEE-eCCHHHHHhCCCCCCEEEE-ECC-
Confidence 355568876 444445566 47999999987655444321 1 112332 2333332 11124788885 121
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEcc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIPS 185 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP~ 185 (359)
......+++......|++|.++|-.
T Consensus 88 --~~~~v~~vl~~l~~~l~~g~iIId~ 112 (480)
T 2zyd_A 88 --AGAGTDAAIDSLKPYLDKGDIIIDG 112 (480)
T ss_dssp --SSSHHHHHHHHHGGGCCTTCEEEEC
T ss_pred --CHHHHHHHHHHHHhhcCCCCEEEEC
Confidence 1122455676666778887777643
No 462
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=38.15 E-value=40 Score=30.44 Aligned_cols=58 Identities=14% Similarity=0.063 Sum_probs=41.1
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.+.. .+.++..+.+|+++.+- -.++|++|..
T Consensus 44 ia~~la~~G--~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 112 (283)
T 3v8b_A 44 TALALAADG--VTVGALGRTRTEVEEVADEIVG--AGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVAN 112 (283)
T ss_dssp HHHHHHHTT--CEEEEEESSHHHHHHHHHHHTT--TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 555556667 4899999998766655555543 45679999999998531 1379999964
No 463
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=38.14 E-value=1.2e+02 Score=27.83 Aligned_cols=78 Identities=9% Similarity=0.002 Sum_probs=45.7
Q ss_pred cHHHHHHHHHHhh---cc-cCCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccc
Q 039233 69 KYIQYQRAIGNAL---VD-RVPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMR 140 (359)
Q Consensus 69 ry~~Y~~AI~~~~---~d-~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~ 140 (359)
-+..+.+++...- ++ +++=+|+|- ++...++.|++ +|+.+..+++..+.+.+.+... . .+.++ +..
T Consensus 109 D~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~-~v~v~~R~~~~a~~la~~~~~~--~-~~~~~--~~~ 182 (281)
T 3o8q_A 109 DGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPA-SITVTNRTFAKAEQLAELVAAY--G-EVKAQ--AFE 182 (281)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCS-EEEEEESSHHHHHHHHHHHGGG--S-CEEEE--EGG
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCC-eEEEEECCHHHHHHHHHHhhcc--C-CeeEe--eHH
Confidence 3555566665432 22 456667764 44455667766 8999999986555444444322 2 35554 233
Q ss_pred cccCCCCccEEEec
Q 039233 141 CWDAPEKADILVSE 154 (359)
Q Consensus 141 ~~~~p~k~DiIVSE 154 (359)
++ ...+|+||+=
T Consensus 183 ~l--~~~aDiIIna 194 (281)
T 3o8q_A 183 QL--KQSYDVIINS 194 (281)
T ss_dssp GC--CSCEEEEEEC
T ss_pred Hh--cCCCCEEEEc
Confidence 33 2689999973
No 464
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=38.14 E-value=67 Score=29.82 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=45.5
Q ss_pred cCCcCChhH----HHHHHHHcCCCCeEEEEeCCH------------------HHHHHHHHHHHhcCCCCeEEEEeCcccc
Q 039233 84 RVPDEEASS----LTTAAEETGRKLKIYAVEKNP------------------NAVVTLHSLVRLEGWEKTVTIVSCDMRC 141 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~------------------~a~~~a~~~~~~n~~~~~V~vi~~d~~~ 141 (359)
+|+=+|+|- ++...+++|.. ++.-||.+. .=++.|++++++-+-.-+|+.+..++.+
T Consensus 38 ~VlVvGaGGlGs~va~~La~aGVG-~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~ 116 (292)
T 3h8v_A 38 AVAIVGVGGVGSVTAEMLTRCGIG-KLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITT 116 (292)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTS
T ss_pred eEEEECcCHHHHHHHHHHHHcCCC-EEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCc
Confidence 688888874 56666788987 999999654 2234555555543345568888877754
Q ss_pred cc-------------C--CCCccEEEe
Q 039233 142 WD-------------A--PEKADILVS 153 (359)
Q Consensus 142 ~~-------------~--p~k~DiIVS 153 (359)
.+ + ...+|+||.
T Consensus 117 ~~~~~~~~~~~~~~~l~~~~~~DlVid 143 (292)
T 3h8v_A 117 VENFQHFMDRISNGGLEEGKPVDLVLS 143 (292)
T ss_dssp HHHHHHHHHHHHHBSSSTTBCCSEEEE
T ss_pred HHHHHHHhhhhcccccccCCCCCEEEE
Confidence 11 1 147999994
No 465
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=38.09 E-value=38 Score=33.38 Aligned_cols=62 Identities=24% Similarity=0.299 Sum_probs=41.6
Q ss_pred CCcCChhHHH-HHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----CCCccEEEe
Q 039233 85 VPDEEASSLT-TAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----PEKADILVS 153 (359)
Q Consensus 85 v~D~g~Gtl~-~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----p~k~DiIVS 153 (359)
|+=+|+|.+. .+|... ..+..|+.||.|++.++.+.+. + + +.+++||..+.+. -+++|++|+
T Consensus 6 iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~-----~-~-~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 6 IIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK-----Y-D-LRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH-----S-S-CEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh-----c-C-cEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 4557888632 233332 2235799999999877655443 2 2 7889999998642 368999996
No 466
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=37.94 E-value=85 Score=27.94 Aligned_cols=58 Identities=17% Similarity=0.299 Sum_probs=39.9
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.++.. +.++.++.+|+++.+- -.++|++|..
T Consensus 38 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~ 106 (277)
T 2rhc_B 38 IARRLGKEG--LRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNN 106 (277)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 555555667 48999999987665555545432 4569999999987531 1378999964
No 467
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=37.54 E-value=30 Score=30.92 Aligned_cols=61 Identities=8% Similarity=0.001 Sum_probs=38.8
Q ss_pred cCCcCChhHH----HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEe
Q 039233 84 RVPDEEASSL----TTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gtl----~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVS 153 (359)
+|+=+|.|.+ +....++|+++.|++=+.++.. ++.... .+|+++.+...+-.+ ..+|+||+
T Consensus 33 ~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l----~~l~~~----~~i~~i~~~~~~~dL-~~adLVIa 97 (223)
T 3dfz_A 33 SVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEI----NEWEAK----GQLRVKRKKVGEEDL-LNVFFIVV 97 (223)
T ss_dssp CEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHH----HHHHHT----TSCEEECSCCCGGGS-SSCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHH----HHHHHc----CCcEEEECCCCHhHh-CCCCEEEE
Confidence 5788898873 3445568877666666666543 222222 358888877665444 46999986
No 468
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=37.23 E-value=55 Score=29.36 Aligned_cols=58 Identities=16% Similarity=0.163 Sum_probs=41.1
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC----------CCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP----------EKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p----------~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++. .+.++..+.+|+.+.+.- .++|++|..
T Consensus 49 ia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnn 116 (275)
T 4imr_A 49 IAEGLAGAG--AHVILHGVKPGSTAAVQQRIIA--SGGTAQELAGDLSEAGAGTDLIERAEAIAPVDILVIN 116 (275)
T ss_dssp HHHHHHHTT--CEEEEEESSTTTTHHHHHHHHH--TTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 555556677 3899999987766666555554 356799999999886411 378999964
No 469
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=36.71 E-value=70 Score=28.99 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=42.3
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++.. +.++.++.+|+.+.+. -.++|++|..
T Consensus 47 la~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnn 115 (301)
T 3tjr_A 47 TATEFARRG--ARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSN 115 (301)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 555556667 48999999988777766666543 4579999999998641 1378999974
No 470
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=36.65 E-value=94 Score=27.13 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=39.7
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++. .+.++.++.+|+.+.+- -.++|++|..
T Consensus 18 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~n 86 (256)
T 1geg_A 18 IALRLVKDG--FAVAIADYNDATAKAVASEINQ--AGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNN 86 (256)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 555555667 4899999998765555444443 24579999999988531 1379999974
No 471
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=36.44 E-value=96 Score=29.42 Aligned_cols=79 Identities=18% Similarity=0.245 Sum_probs=50.7
Q ss_pred HHHHHHhhcc-cCCcCC-hhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhc-CC-CCeEEEEeCcccccc--
Q 039233 74 QRAIGNALVD-RVPDEE-ASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLE-GW-EKTVTIVSCDMRCWD-- 143 (359)
Q Consensus 74 ~~AI~~~~~d-~v~D~g-~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n-~~-~~~V~vi~~d~~~~~-- 143 (359)
...+...+++ +|+=.| +|. |+...++.|.. +|++++.++.....+.+.+... ++ +.+++++.+|+++.+
T Consensus 26 ~~~~~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~ 104 (399)
T 3nzo_A 26 EKELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQ-KLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYD 104 (399)
T ss_dssp HHHHHHHHHTCEEEEETTTSHHHHHHHHHHHTTCCS-EEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHH
T ss_pred HHHHHHHhCCCEEEEEcCChHHHHHHHHHHHHCCCC-EEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHH
Confidence 3455555655 355445 454 55555566654 9999999987665544444332 21 367999999998853
Q ss_pred ----CCCCccEEEe
Q 039233 144 ----APEKADILVS 153 (359)
Q Consensus 144 ----~p~k~DiIVS 153 (359)
...++|+||.
T Consensus 105 ~~~~~~~~~D~Vih 118 (399)
T 3nzo_A 105 AFIKADGQYDYVLN 118 (399)
T ss_dssp HHHHHCCCCSEEEE
T ss_pred HHHHHhCCCCEEEE
Confidence 1257999995
No 472
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=36.21 E-value=35 Score=30.07 Aligned_cols=84 Identities=15% Similarity=0.205 Sum_probs=43.4
Q ss_pred CCcCChhH----HHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccc
Q 039233 85 VPDEEASS----LTTAAEETGR--KLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGS 158 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga--~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs 158 (359)
+.=+|+|. ++....++|. ..+|+.++.|++.++.+++.. + +++ ..+..+. -+.+|+||.=+
T Consensus 5 i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g----~~~-~~~~~e~--~~~aDvVilav--- 71 (247)
T 3gt0_A 5 IGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---G----LTT-TTDNNEV--AKNADILILSI--- 71 (247)
T ss_dssp EEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---C----CEE-CSCHHHH--HHHCSEEEECS---
T ss_pred EEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---C----CEE-eCChHHH--HHhCCEEEEEe---
Confidence 44468886 3444455652 118999999987655544321 2 221 2222221 13578888421
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEE
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISI 183 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~I 183 (359)
......+++......|+++.++|
T Consensus 72 --~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 72 --KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp --CTTTHHHHC---CCSSCTTCEEE
T ss_pred --CHHHHHHHHHHHHhhcCCCCEEE
Confidence 22334556666666677777666
No 473
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=36.06 E-value=62 Score=28.52 Aligned_cols=58 Identities=22% Similarity=0.208 Sum_probs=40.2
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.++. .+.++.++.+|+.+.+- -.++|++|..
T Consensus 23 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~n 91 (262)
T 1zem_A 23 TALRLAEEG--TAIALLDMNREALEKAEASVRE--KGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNN 91 (262)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHT--TTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 555556667 4899999998766555555443 34579999999988531 1378999974
No 474
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=35.82 E-value=1.2e+02 Score=29.70 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=51.9
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHH------------HhcCCCCeEEEEeCccccccCCCCc
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLV------------RLEGWEKTVTIVSCDMRCWDAPEKA 148 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~------------~~n~~~~~V~vi~~d~~~~~~p~k~ 148 (359)
|.=+|+|. ++...+++| .+|+++|.|+..++.+++.. +++--..++++ ..|..+. -..+
T Consensus 5 I~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea--~~~a 79 (450)
T 3gg2_A 5 IAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQA--VPEA 79 (450)
T ss_dssp EEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHH--GGGC
T ss_pred EEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHH--HhcC
Confidence 34468876 444445566 58999999997766554410 00000123443 2333321 2468
Q ss_pred cEEEeccccccCCCC------ChHHHHHHHhhccCCCeEEEccc
Q 039233 149 DILVSELLGSFGDNE------LSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 149 DiIVSEllGs~~~~E------l~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
|+||. .+++-.+.. ...+++....+.|+++.++|=.+
T Consensus 80 DvVii-aVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 80 DIIFI-AVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp SEEEE-CCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred CEEEE-EcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 99885 344432111 23445566667888888877555
No 475
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=35.18 E-value=74 Score=29.41 Aligned_cols=64 Identities=17% Similarity=0.167 Sum_probs=41.4
Q ss_pred CCcCC-hhH----HHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCcccccc----CCCCccEEEe
Q 039233 85 VPDEE-ASS----LTTAAEET-GRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWD----APEKADILVS 153 (359)
Q Consensus 85 v~D~g-~Gt----l~~~A~~a-ga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~----~p~k~DiIVS 153 (359)
|+=.| +|. ++....+. |.. +|+++..++.....+++.+. ..+++++.+|+++.+ .-+.+|+||.
T Consensus 24 vlVTGatG~iG~~l~~~L~~~~g~~-~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 24 ILITGGTGSFGKCFVRKVLDTTNAK-KIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCCCS-EEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEEECCCcHHHHHHHHHHHhhCCCC-EEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 44444 454 44444455 754 89999999865544433322 256999999999853 2347899996
No 476
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=34.61 E-value=54 Score=29.33 Aligned_cols=58 Identities=19% Similarity=0.208 Sum_probs=41.7
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|+.++.++.....+.+.++. .+.++.++.+|+++.+- -.++|++|..
T Consensus 42 ia~~la~~G--~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n 110 (271)
T 4ibo_A 42 MAEGLAVAG--ARILINGTDPSRVAQTVQEFRN--VGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNN 110 (271)
T ss_dssp HHHHHHHTT--CEEEECCSCHHHHHHHHHHHHH--TTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence 555556677 4899999998776666655554 34679999999998631 1378999974
No 477
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=34.46 E-value=71 Score=28.67 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=38.4
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.+ +.++..+.+|+++.+. -.++|++|..
T Consensus 45 ia~~la~~G--~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 110 (277)
T 3gvc_A 45 VARRLADEG--CHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVAN 110 (277)
T ss_dssp HHHHHHHTT--CEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555556677 48999999986554443332 5678999999998641 1378999974
No 478
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=34.40 E-value=65 Score=28.47 Aligned_cols=59 Identities=12% Similarity=0.109 Sum_probs=41.5
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|+.++.++...+.+.+.++..+ ..++..+.+|+++.+. -.++|++|..
T Consensus 26 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnn 95 (262)
T 3pk0_A 26 IATVFARAG--ANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCAN 95 (262)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 555556667 489999999877766666555432 2579999999998531 1379999964
No 479
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=33.95 E-value=35 Score=33.72 Aligned_cols=64 Identities=13% Similarity=0.188 Sum_probs=44.4
Q ss_pred cCCcCChhHHH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----CCCccEEEe
Q 039233 84 RVPDEEASSLT-TAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----PEKADILVS 153 (359)
Q Consensus 84 ~v~D~g~Gtl~-~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----p~k~DiIVS 153 (359)
+|+=+|.|.+. .+|.....+..|.-||+|++-++.+.+. +.+ ..+++||.++.++ -+.+|++|+
T Consensus 237 ~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~-----l~~-~~Vi~GD~td~~~L~ee~i~~~D~~ia 306 (461)
T 4g65_A 237 RIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEE-----LEN-TIVFCGDAADQELLTEENIDQVDVFIA 306 (461)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHH-----CTT-SEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred EEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHH-----CCC-ceEEeccccchhhHhhcCchhhcEEEE
Confidence 46667877633 3444444456999999999755554433 444 7899999999652 268999997
No 480
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=33.85 E-value=69 Score=28.36 Aligned_cols=59 Identities=10% Similarity=0.132 Sum_probs=42.5
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.|+ +|+.++.++...+.+.+.++..+ +.++..+.+|+++.+- -.++|++|..
T Consensus 24 iA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnn 93 (256)
T 4fs3_A 24 VAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHS 93 (256)
T ss_dssp HHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEec
Confidence 5666677884 78999999877777776665432 3468899999988531 1479999975
No 481
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=33.67 E-value=60 Score=29.05 Aligned_cols=57 Identities=14% Similarity=0.325 Sum_probs=38.5
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.+.. .+ ++.++.+|+++.+- -.++|++|..
T Consensus 45 ia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~--~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 112 (276)
T 2b4q_A 45 IAQGLLEAG--ARVFICARDAEACADTATRLSA--YG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNN 112 (276)
T ss_dssp HHHHHHHTT--CEEEEECSCHHHHHHHHHHHTT--SS-CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cC-ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 555555667 4899999998765544444432 22 69999999988531 1378999974
No 482
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=33.26 E-value=90 Score=27.22 Aligned_cols=58 Identities=21% Similarity=0.153 Sum_probs=39.4
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC------------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA------------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~------------p~k~DiIVSE 154 (359)
++...++.| .+|+++..++.....+.+.++.. +.++.++.+|+.+.+. ..++|+||..
T Consensus 30 la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~ 99 (266)
T 1xq1_A 30 IVEEFAGFG--AVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINN 99 (266)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEEC
Confidence 555555667 48999999987655544444432 4569999999987531 1478999964
No 483
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=33.09 E-value=37 Score=27.87 Aligned_cols=31 Identities=16% Similarity=0.406 Sum_probs=22.9
Q ss_pred CeEEecCCCeEEEEEEeeeCCCeEEEEEEEecCC
Q 039233 310 TPVCIRPGSPLEVHFWRCCGSTKVWYEWCVASPN 343 (359)
Q Consensus 310 ~Pi~V~~G~~i~~~~~R~~~~~~VWyeW~~~~p~ 343 (359)
++|.|+.|+.+.+.+.-+.... |.|.+..+.
T Consensus 35 ~tI~v~~Ge~~~I~L~~NPTTG---Y~W~~~~~~ 65 (132)
T 2wgn_B 35 SPLKLTQGQELVLTLPSNPTTG---FRWELRNPA 65 (132)
T ss_dssp SCEEECTTCEEEEEECCCTTTS---CEEEEEECC
T ss_pred cEEEEcCCCEEEEEeCCCCCCC---eEEEEecCC
Confidence 5799999999999985444333 778887644
No 484
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=32.88 E-value=1.9e+02 Score=26.37 Aligned_cols=65 Identities=6% Similarity=-0.051 Sum_probs=33.6
Q ss_pred CcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHH-hcCCCCeEEEEeCccccccCCCCccEEEe
Q 039233 86 PDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVR-LEGWEKTVTIVSCDMRCWDAPEKADILVS 153 (359)
Q Consensus 86 ~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~-~n~~~~~V~vi~~d~~~~~~p~k~DiIVS 153 (359)
.=+|+|. ++...+..|....|+.+|.+++.++.....+. ...+...+++...|... -..+|+||.
T Consensus 4 ~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a---~~~aDvVIi 73 (304)
T 2v6b_A 4 GVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSE---LADAQVVIL 73 (304)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGG---GTTCSEEEE
T ss_pred EEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHH---hCCCCEEEE
Confidence 3457775 55555566632289999999875542111111 11111223333334322 247899985
No 485
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=32.87 E-value=90 Score=28.18 Aligned_cols=58 Identities=21% Similarity=0.143 Sum_probs=39.5
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++...+.+.+.++. .+.++.++.+|+++.+- -.++|++|..
T Consensus 50 ia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 118 (291)
T 3cxt_A 50 IASAYAKAG--ATIVFNDINQELVDRGMAAYKA--AGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNN 118 (291)
T ss_dssp HHHHHHHTT--CEEEEEESSHHHHHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHHHHHTCCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEEC
Confidence 555555667 4899999998766555554443 24568899999988531 1368999974
No 486
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=32.73 E-value=92 Score=28.09 Aligned_cols=58 Identities=19% Similarity=0.310 Sum_probs=39.0
Q ss_pred HHHHHHHcCCCCeEEEEeCC------------HHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCcc
Q 039233 93 LTTAAEETGRKLKIYAVEKN------------PNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKAD 149 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n------------~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~D 149 (359)
++...++.| .+|++++.+ +.....+.+.++. .+.++.++.+|+++.+- -.++|
T Consensus 44 ia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 119 (299)
T 3t7c_A 44 HAITLAREG--ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA--LGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLD 119 (299)
T ss_dssp HHHHHHHTT--CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHCC--CEEEEEecccccccccccccCHHHHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 555556677 478888876 5444444444443 45679999999998531 13799
Q ss_pred EEEec
Q 039233 150 ILVSE 154 (359)
Q Consensus 150 iIVSE 154 (359)
++|..
T Consensus 120 ~lv~n 124 (299)
T 3t7c_A 120 IVLAN 124 (299)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99964
No 487
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=32.66 E-value=53 Score=28.55 Aligned_cols=58 Identities=9% Similarity=0.023 Sum_probs=39.1
Q ss_pred HHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEE-TGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~-aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++ .| .+|+++..++.....+.+.++.. +.+++++.+|+.+.+. -.++|+||..
T Consensus 20 ~a~~L~~~~g--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ 89 (276)
T 1wma_A 20 IVRDLCRLFS--GDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNN 89 (276)
T ss_dssp HHHHHHHHSS--SEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred HHHHHHHhcC--CeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 4444444 66 48999999987665555555443 4578999999988531 0278999963
No 488
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=32.59 E-value=52 Score=29.30 Aligned_cols=82 Identities=5% Similarity=-0.034 Sum_probs=44.5
Q ss_pred CcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccCC
Q 039233 86 PDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFGD 161 (359)
Q Consensus 86 ~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~~ 161 (359)
.=+|+|. ++....+ | .+|+.++.++...+.+.+. |. ++.. ..+ .-..+|+||. .+.+
T Consensus 5 ~iiG~G~~G~~~a~~l~~-g--~~V~~~~~~~~~~~~~~~~----g~----~~~~--~~~--~~~~~D~vi~-~v~~--- 65 (289)
T 2cvz_A 5 AFIGLGAMGYPMAGHLAR-R--FPTLVWNRTFEKALRHQEE----FG----SEAV--PLE--RVAEARVIFT-CLPT--- 65 (289)
T ss_dssp EEECCSTTHHHHHHHHHT-T--SCEEEECSSTHHHHHHHHH----HC----CEEC--CGG--GGGGCSEEEE-CCSS---
T ss_pred EEEcccHHHHHHHHHHhC-C--CeEEEEeCCHHHHHHHHHC----CC----cccC--HHH--HHhCCCEEEE-eCCC---
Confidence 3457775 3333344 6 4799999998655444332 22 1221 222 1246899985 2221
Q ss_pred CCChHHHHHHHhhccCCCeEEEccc
Q 039233 162 NELSPECLDGAQRFLKQDGISIPSS 186 (359)
Q Consensus 162 ~El~~e~L~~a~r~Lkp~Gi~IP~~ 186 (359)
.....+++......|++|.++|-.+
T Consensus 66 ~~~~~~v~~~l~~~l~~~~~vv~~s 90 (289)
T 2cvz_A 66 TREVYEVAEALYPYLREGTYWVDAT 90 (289)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEECS
T ss_pred hHHHHHHHHHHHhhCCCCCEEEECC
Confidence 1113345555556788888877543
No 489
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=32.29 E-value=1e+02 Score=27.51 Aligned_cols=58 Identities=16% Similarity=0.214 Sum_probs=39.4
Q ss_pred HHHHHHHcCCCCeEEEEeC-CHHHHHHHHHHHHhcCCCCeEEEEeCccccccCC-----------CCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEK-NPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAP-----------EKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~-n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p-----------~k~DiIVSE 154 (359)
++...++.| .+|+.++. ++...+.+.+.+.. .+.++.++.+|+++.+.- .++|++|..
T Consensus 45 ia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn 114 (280)
T 4da9_A 45 IARALAASG--FDIAITGIGDAEGVAPVIAELSG--LGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNN 114 (280)
T ss_dssp HHHHHHHTT--CEEEEEESCCHHHHHHHHHHHHH--TTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEE
T ss_pred HHHHHHHCC--CeEEEEeCCCHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555556677 47888885 66655555554443 356799999999986421 378999964
No 490
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=32.14 E-value=93 Score=27.68 Aligned_cols=58 Identities=24% Similarity=0.381 Sum_probs=39.1
Q ss_pred HHHHHHHcCCCCeEEEEeCC----------------HHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------C
Q 039233 93 LTTAAEETGRKLKIYAVEKN----------------PNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------P 145 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n----------------~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p 145 (359)
++...++.| .+|++++.+ ++....+.+.++. .+.++.++.+|+++.+- -
T Consensus 27 ia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 102 (286)
T 3uve_A 27 HAVRLAQEG--ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG--HNRRIVTAEVDVRDYDALKAAVDSGVEQL 102 (286)
T ss_dssp HHHHHHHTT--CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT--TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCC--CeEEEEeccccccccccccccccCCHHHHHHHHHHHhh--cCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 555556677 479999876 5544444444443 45689999999998531 1
Q ss_pred CCccEEEec
Q 039233 146 EKADILVSE 154 (359)
Q Consensus 146 ~k~DiIVSE 154 (359)
.++|++|..
T Consensus 103 g~id~lv~n 111 (286)
T 3uve_A 103 GRLDIIVAN 111 (286)
T ss_dssp SCCCEEEEC
T ss_pred CCCCEEEEC
Confidence 378999974
No 491
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.84 E-value=1.3e+02 Score=26.90 Aligned_cols=82 Identities=18% Similarity=0.215 Sum_probs=47.6
Q ss_pred cCCcCCh-hH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccc
Q 039233 84 RVPDEEA-SS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGS 158 (359)
Q Consensus 84 ~v~D~g~-Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs 158 (359)
+|.=+|+ |. ++....++| .+|++++.++...+.+++ .| +++ .+..+ .-+.+|+||. .+..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~----~g----~~~--~~~~~--~~~~aDvVi~-av~~ 77 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSA--HHLAAIEIAPEGRDRLQG----MG----IPL--TDGDG--WIDEADVVVL-ALPD 77 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSS--SEEEEECCSHHHHHHHHH----TT----CCC--CCSSG--GGGTCSEEEE-CSCH
T ss_pred EEEEECCCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHh----cC----CCc--CCHHH--HhcCCCEEEE-cCCc
Confidence 3555788 86 444445666 589999999876554433 22 211 12222 2247899985 2221
Q ss_pred cCCCCChHHHHHHHhhccCCCeEEEc
Q 039233 159 FGDNELSPECLDGAQRFLKQDGISIP 184 (359)
Q Consensus 159 ~~~~El~~e~L~~a~r~Lkp~Gi~IP 184 (359)
. ...+++......|+++.++|-
T Consensus 78 ---~-~~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 78 ---N-IIEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp ---H-HHHHHHHHHGGGSCTTCEEEE
T ss_pred ---h-HHHHHHHHHHHhCCCCCEEEE
Confidence 1 145566666677888877664
No 492
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=31.81 E-value=84 Score=28.01 Aligned_cols=59 Identities=15% Similarity=0.259 Sum_probs=39.3
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++.. .+.++.++.+|+++.+. -.++|+||..
T Consensus 42 la~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ 111 (302)
T 1w6u_A 42 MTTLLSSLG--AQCVIASRKMDVLKATAEQISSQ-TGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINN 111 (302)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH-HSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHh-cCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555555667 48999999987655444444321 14579999999987531 1367999964
No 493
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=31.75 E-value=1.1e+02 Score=26.38 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=42.1
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|++++.++.....+.+.++. .+.++.++.+|+++.+. -.++|++|..
T Consensus 25 ~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 93 (253)
T 3qiv_A 25 YAEALAREG--AAVVVADINAEAAEAVAKQIVA--DGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNN 93 (253)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH--TTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555556667 4899999998877666666554 35689999999998631 1378999974
No 494
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=31.70 E-value=50 Score=29.64 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=41.2
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|+.++.++...+.+.+.++. .+.++..+.+|+++.+- -.++|++|..
T Consensus 48 ia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnn 116 (276)
T 3r1i_A 48 VALAYAEAG--AQVAVAARHSDALQVVADEIAG--VGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCN 116 (276)
T ss_dssp HHHHHHHTT--CEEEEEESSGGGGHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 555556667 4899999988776666665554 34578999999998641 1379999964
No 495
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=31.65 E-value=51 Score=29.13 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=38.5
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCccEEEec
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKADILVSE 154 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~DiIVSE 154 (359)
++...++.| .+|+.++.++...+.+.+.. +.++..+.+|+++.+- -.++|++|..
T Consensus 24 ~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 89 (255)
T 4eso_A 24 TVRRLVEGG--AEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN 89 (255)
T ss_dssp HHHHHHHTT--CEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred HHHHHHHCC--CEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 555556667 48999999987654444332 4579999999998641 1378999964
No 496
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=31.17 E-value=1e+02 Score=30.62 Aligned_cols=107 Identities=11% Similarity=0.092 Sum_probs=56.3
Q ss_pred cCCcCChhH----HHHHHHHc-CCCC-eEEEEeCCHH----HHHHHHHH--------------HHhcCCCCeEEEEeCcc
Q 039233 84 RVPDEEASS----LTTAAEET-GRKL-KIYAVEKNPN----AVVTLHSL--------------VRLEGWEKTVTIVSCDM 139 (359)
Q Consensus 84 ~v~D~g~Gt----l~~~A~~a-ga~~-~V~AVE~n~~----a~~~a~~~--------------~~~n~~~~~V~vi~~d~ 139 (359)
+|-=+|+|. ++...+++ | . +|+++|.|++ .++.+++. ++++-...+++. ..|.
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G--~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~-ttd~ 96 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPC--FEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC-TPDF 96 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTT--CCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE-ESCG
T ss_pred EEEEECcCHHHHHHHHHHHHhCC--CCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE-eCcH
Confidence 345567775 44444566 6 5 8999999987 55444321 000000233443 2332
Q ss_pred ccccCCCCccEEEeccccccCCCC------C--hHHHHHHHhhccCCCeEEEccccceeeeeccchhhh
Q 039233 140 RCWDAPEKADILVSELLGSFGDNE------L--SPECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLH 200 (359)
Q Consensus 140 ~~~~~p~k~DiIVSEllGs~~~~E------l--~~e~L~~a~r~Lkp~Gi~IP~~~t~~~~pi~s~~l~ 200 (359)
. .-..+|+||. .+++-.+.+ + .........+.|++|.++|=. +-+.|-...++.
T Consensus 97 e---a~~~aDvVii-aVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~---STv~pgtt~~v~ 158 (478)
T 3g79_A 97 S---RISELDAVTL-AIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLE---STITPGTTEGMA 158 (478)
T ss_dssp G---GGGGCSEEEE-CCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEEC---SCCCTTTTTTHH
T ss_pred H---HHhcCCEEEE-ecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEe---CCCChHHHHHHH
Confidence 2 2357899885 455533211 1 223345556788998887733 344444555554
No 497
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=30.82 E-value=82 Score=27.85 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCeEEEEeCC------------HHHHHHHHHHHHhcCCCCeEEEEeCccccccC-----------CCCcc
Q 039233 93 LTTAAEETGRKLKIYAVEKN------------PNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDA-----------PEKAD 149 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n------------~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~-----------p~k~D 149 (359)
++...++.| .+|++++.+ ++....+.+.++. .+.++.++.+|+++.+- -.++|
T Consensus 29 ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 104 (278)
T 3sx2_A 29 HAVRLAADG--ADIIAVDLCDQIASVPYPLATPEELAATVKLVED--IGSRIVARQADVRDRESLSAALQAGLDELGRLD 104 (278)
T ss_dssp HHHHHHHTT--CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHCC--CeEEEEecccccccccccccchHHHHHHHHHHHh--cCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 555556677 478999876 5555444444443 34679999999998531 13789
Q ss_pred EEEec
Q 039233 150 ILVSE 154 (359)
Q Consensus 150 iIVSE 154 (359)
++|..
T Consensus 105 ~lv~n 109 (278)
T 3sx2_A 105 IVVAN 109 (278)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99974
No 498
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=30.79 E-value=2.9e+02 Score=25.34 Aligned_cols=64 Identities=11% Similarity=0.017 Sum_probs=35.1
Q ss_pred cCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHH-HHHHHHhcCCCCeEEEEeCccccccCCCCccEEEe
Q 039233 87 DEEASS----LTTAAEETGRKLKIYAVEKNPNAVVT-LHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVS 153 (359)
Q Consensus 87 D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~-a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVS 153 (359)
=+|+|. ++...+..+.-..|..+|.+++.++. +.+......+...+++..++-.. -..+|+||.
T Consensus 5 IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a---~~~aD~Vii 73 (310)
T 2xxj_A 5 IVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGD---LEGARAVVL 73 (310)
T ss_dssp EECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGG---GTTEEEEEE
T ss_pred EECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHH---hCCCCEEEE
Confidence 357765 44444444433389999999875543 33333222122345555554332 357899996
No 499
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=30.67 E-value=35 Score=30.93 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=44.5
Q ss_pred CCcCChhH----HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEeCccccccCCCCccEEEeccccccC
Q 039233 85 VPDEEASS----LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIVSCDMRCWDAPEKADILVSELLGSFG 160 (359)
Q Consensus 85 v~D~g~Gt----l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi~~d~~~~~~p~k~DiIVSEllGs~~ 160 (359)
|.=+|+|. ++...+++| .+|++++.++..++.+.+ .+ ++. ..+..+. -..+|+||.= +.
T Consensus 6 I~iiG~G~mG~~~a~~l~~~G--~~V~~~d~~~~~~~~~~~----~g----~~~-~~~~~~~--~~~aDvvi~~-vp--- 68 (302)
T 2h78_A 6 IAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQSAVDGLVA----AG----ASA-ARSARDA--VQGADVVISM-LP--- 68 (302)
T ss_dssp EEEECCSTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHH----TT----CEE-CSSHHHH--HTTCSEEEEC-CS---
T ss_pred EEEEeecHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHH----CC----CeE-cCCHHHH--HhCCCeEEEE-CC---
Confidence 34467775 445555666 489999999876554433 22 221 1222221 2468988852 21
Q ss_pred CCCChHHHHH---HHhhccCCCeEEEcc
Q 039233 161 DNELSPECLD---GAQRFLKQDGISIPS 185 (359)
Q Consensus 161 ~~El~~e~L~---~a~r~Lkp~Gi~IP~ 185 (359)
......+++. .....|+++.++|-.
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi~~ 96 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLEC 96 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEEEC
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEEEC
Confidence 1111333444 334567777776654
No 500
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.64 E-value=1.8e+02 Score=25.96 Aligned_cols=58 Identities=14% Similarity=0.105 Sum_probs=37.4
Q ss_pred HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCeEEEE-eCccccccC----CCCccEEEe
Q 039233 93 LTTAAEETGRKLKIYAVEKNPNAVVTLHSLVRLEGWEKTVTIV-SCDMRCWDA----PEKADILVS 153 (359)
Q Consensus 93 l~~~A~~aga~~~V~AVE~n~~a~~~a~~~~~~n~~~~~V~vi-~~d~~~~~~----p~k~DiIVS 153 (359)
++....+.| .+|+++..++.....+.+.+... .+.+++++ .+|+++.+. -+++|+||.
T Consensus 27 l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 89 (342)
T 1y1p_A 27 VVEQLLEHG--YKVRGTARSASKLANLQKRWDAK-YPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp HHHHHHHTT--CEEEEEESSHHHHHHHHHHHHHH-STTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred HHHHHHHCC--CEEEEEeCCcccHHHHHHHhhcc-CCCceEEEEecCCcChHHHHHHHcCCCEEEE
Confidence 555455566 48999999876554444433221 23568888 899987532 246899996
Done!