BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039237
MGSGERLVACGTCKNLIHEECWVTWKRSRGRRAASCVICRGRWRDNRTDQDKYLNLAAFV
SQEDHHHQAAEDSGSRICGLEAVEEDNEIQVQVNFHDS

High Scoring Gene Products

Symbol, full name Information P value
AT5G11620 protein from Arabidopsis thaliana 3.1e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039237
        (98 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2181915 - symbol:AT5G11620 species:3702 "Arabi...   157  3.1e-11   1
ASPGD|ASPL0000071211 - symbol:AN4359 species:162425 "Emer...    95  0.00039   1


>TAIR|locus:2181915 [details] [associations]
            symbol:AT5G11620 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00184 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 EMBL:AL163814 EMBL:BT005601 EMBL:DQ059086
            EMBL:AK118062 IPI:IPI00545925 PIR:T48521 RefSeq:NP_196723.1
            UniGene:At.32234 ProteinModelPortal:Q9LYG8 SMR:Q9LYG8 IntAct:Q9LYG8
            EnsemblPlants:AT5G11620.1 GeneID:831034 KEGG:ath:AT5G11620
            TAIR:At5g11620 eggNOG:NOG266646 HOGENOM:HOG000241905
            InParanoid:Q9LYG8 OMA:PCKHILF PhylomeDB:Q9LYG8
            ProtClustDB:CLSN2686633 Genevestigator:Q9LYG8 Uniprot:Q9LYG8
        Length = 273

 Score = 157 (60.3 bits), Expect = 3.1e-11, P = 3.1e-11
 Identities = 30/70 (42%), Positives = 42/70 (60%)

Query:     7 LVACGTCKNLIHEECWVTWKRSRGRRAASCVICRGRWRDNRTDQDK-------------Y 53
             +V C  CKN +H+EC + W++SRGRR A CV+CR RW  NR+ ++              Y
Sbjct:   192 VVKCRVCKNKVHDECMLAWRKSRGRRPAICVVCRARWPANRSSKNPNVGDNNENCHGNCY 251

Query:    54 LNLAAFVSQE 63
             LNLA +V +E
Sbjct:   252 LNLAPYVDEE 261


>ASPGD|ASPL0000071211 [details] [associations]
            symbol:AN4359 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR001841 InterPro:IPR007527 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50966 SMART:SM00184 GO:GO:0046872
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BN001303
            EMBL:AACD01000075 OrthoDB:EOG490BJS RefSeq:XP_661963.1
            EnsemblFungi:CADANIAT00006099 GeneID:2872157 KEGG:ani:AN4359.2
            eggNOG:NOG78370 HOGENOM:HOG000188089 OMA:HCKHIMF Uniprot:Q5B521
        Length = 333

 Score = 95 (38.5 bits), Expect = 0.00039, P = 0.00039
 Identities = 23/75 (30%), Positives = 32/75 (42%)

Query:     5 ERLVAC-GTCKNLIHEECWVTWKRSRGRRAASCVICRGRWRDNRTDQDKYLNLAAFVSQ- 62
             E +V C   C N IH+ C+  W  S   +   CV CR  W++   D    + L   V+Q 
Sbjct:   225 EDIVWCRAACGNNIHKACFQKWAASSNNQGVRCVYCRSPWQNQDADGKVDVTLEQLVAQG 284

Query:    63 ---EDHHHQAAEDSG 74
                ED +   A   G
Sbjct:   285 RVGEDGYINVASQMG 299


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.132   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       98        98   0.00091  102 3  11 22  0.38    30
                                                     29  0.45    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  141 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.48u 0.08s 10.56t   Elapsed:  00:00:01
  Total cpu time:  10.48u 0.08s 10.56t   Elapsed:  00:00:01
  Start:  Fri May 10 15:36:37 2013   End:  Fri May 10 15:36:38 2013

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