Query 039238
Match_columns 417
No_of_seqs 14 out of 16
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 12:46:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039238.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039238hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1s35a2 a.7.1.1 (A:1169-1273) 75.7 7.8 0.00057 27.4 8.2 63 29-91 31-95 (105)
2 d1cuna2 a.7.1.1 (A:116-219) Sp 73.6 7.9 0.00058 27.3 7.8 61 30-90 29-91 (104)
3 d1u5pa1 a.7.1.1 (A:1662-1771) 65.6 13 0.00096 26.1 7.5 62 31-92 35-98 (110)
4 d1u5pa2 a.7.1.1 (A:1772-1872) 59.0 19 0.0014 24.7 7.3 58 31-88 31-90 (101)
5 d1fxka_ a.2.5.1 (A:) Prefoldin 45.3 14 0.00099 27.7 4.8 28 4-31 16-43 (107)
6 d1seta1 a.2.7.1 (A:1-110) Sery 41.7 32 0.0023 25.4 6.4 66 18-92 29-95 (110)
7 d1quua1 a.7.1.1 (A:1-124) alph 40.1 58 0.0042 23.1 8.2 59 31-89 48-108 (124)
8 d1fxkc_ a.2.5.1 (C:) Prefoldin 35.3 38 0.0028 25.3 6.0 38 22-59 93-130 (133)
9 d1fxka_ a.2.5.1 (A:) Prefoldin 35.3 68 0.0049 23.6 7.4 23 70-92 81-103 (107)
10 d1s35a1 a.7.1.1 (A:1063-1168) 34.2 65 0.0047 22.0 8.7 60 32-91 33-95 (106)
11 d1qvra2 c.37.1.20 (A:149-535) 31.8 56 0.0041 29.3 7.5 19 42-60 286-304 (387)
12 d1seta1 a.2.7.1 (A:1-110) Sery 31.3 90 0.0066 22.7 9.6 20 69-88 79-98 (110)
13 d1hcia4 a.7.1.1 (A:633-746) al 30.1 53 0.0039 23.4 5.8 59 28-86 34-108 (114)
14 d2spca_ a.7.1.1 (A:) Spectrin 30.1 77 0.0056 21.5 7.4 51 31-81 36-88 (107)
15 d1grja1 a.2.1.1 (A:2-79) GreA 28.3 1E+02 0.0073 22.5 7.1 45 52-97 30-74 (78)
16 d1f5na1 a.114.1.1 (A:284-583) 26.9 1.4E+02 0.01 23.5 8.7 11 79-89 288-298 (300)
17 d1owaa_ a.7.1.1 (A:) Spectrin 26.9 1.1E+02 0.0078 22.2 9.7 62 31-92 85-148 (156)
18 d1gqea_ e.38.1.1 (A:) Polypept 23.8 1.6E+02 0.012 26.3 9.1 29 3-31 6-36 (362)
19 d1gqea_ e.38.1.1 (A:) Polypept 21.7 2.6E+02 0.019 24.8 10.4 31 15-45 4-36 (362)
20 d1r8ea1 a.6.1.3 (A:3-120) Tran 20.8 1E+02 0.0075 22.3 6.0 23 73-95 96-118 (118)
21 d1wa8b1 a.25.3.1 (B:602-695) E 20.3 1.3E+02 0.0098 20.9 7.2 36 26-61 7-42 (94)
No 1
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.65 E-value=7.8 Score=27.36 Aligned_cols=63 Identities=8% Similarity=0.049 Sum_probs=44.9
Q ss_pred hhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hccchhHHHHHHHHHHHhHHHHHHHHHhh
Q 039238 29 MQSTIDSLKDEQKALESALEEKQNEIKMQREQID--ASKENSQLIVLKEILKQREAEIKDLRHQL 91 (417)
Q Consensus 29 mqSTi~sLKdeQK~lEsAl~EKq~eI~~m~E~~~--a~k~~~Qm~aL~E~LkqKEAEiEdlK~rl 91 (417)
--+++.+|-..++.||..+...+..|..+.+.+. ...+++....|++-+......-++|+.+.
T Consensus 31 dl~~v~~l~k~h~~l~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~l~~rw~~l~~~~ 95 (105)
T d1s35a2 31 SLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKA 95 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 4456778888999999999999999999999888 44555555555555555555455554443
No 2
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=73.58 E-value=7.9 Score=27.28 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=43.6
Q ss_pred hhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hccchhHHHHHHHHHHHhHHHHHHHHHh
Q 039238 30 QSTIDSLKDEQKALESALEEKQNEIKMQREQID--ASKENSQLIVLKEILKQREAEIKDLRHQ 90 (417)
Q Consensus 30 qSTi~sLKdeQK~lEsAl~EKq~eI~~m~E~~~--a~k~~~Qm~aL~E~LkqKEAEiEdlK~r 90 (417)
-+++..|-+.++.++..+...+..+..+.+.+. ...+++....|++-|...+.-..+|...
T Consensus 29 ~~~v~~ll~~h~~~~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~I~~~~~~l~~~w~~L~~~ 91 (104)
T d1cuna2 29 LAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKA 91 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 455778888999999999999999999999987 3445555566665555555444444433
No 3
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=65.57 E-value=13 Score=26.12 Aligned_cols=62 Identities=11% Similarity=0.229 Sum_probs=46.9
Q ss_pred hhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hccchhHHHHHHHHHHHhHHHHHHHHHhhh
Q 039238 31 STIDSLKDEQKALESALEEKQNEIKMQREQID--ASKENSQLIVLKEILKQREAEIKDLRHQLE 92 (417)
Q Consensus 31 STi~sLKdeQK~lEsAl~EKq~eI~~m~E~~~--a~k~~~Qm~aL~E~LkqKEAEiEdlK~rle 92 (417)
+++..|-..++.+++.+...+..|..+.+.+. ...+++....|++.+.....-..+|+...+
T Consensus 35 ~~~~~~~~~h~~~~~ei~~~~~~i~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~ 98 (110)
T d1u5pa1 35 ASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAA 98 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888999999999999999999999887 445565666677766666666666655544
No 4
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=59.02 E-value=19 Score=24.71 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=39.5
Q ss_pred hhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hccchhHHHHHHHHHHHhHHHHHHHH
Q 039238 31 STIDSLKDEQKALESALEEKQNEIKMQREQID--ASKENSQLIVLKEILKQREAEIKDLR 88 (417)
Q Consensus 31 STi~sLKdeQK~lEsAl~EKq~eI~~m~E~~~--a~k~~~Qm~aL~E~LkqKEAEiEdlK 88 (417)
..+..|-..++.++..+...+..|..+.+.+. ...+++.-..|+.-|.....--+.|.
T Consensus 31 ~~~~~ll~~h~~~~~~i~~~~~~~~~l~~~~~~l~~~~~~~~~~I~~~~~~l~~~w~~L~ 90 (101)
T d1u5pa2 31 TGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELK 90 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 35667778899999999999999999999888 33444444555554444444444443
No 5
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=45.26 E-value=14 Score=27.65 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=21.3
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHhhhhh
Q 039238 4 KNEEMKVKLYSLRTQKMELDRRLLEMQS 31 (417)
Q Consensus 4 K~EEmkAK~~sLr~QKmEL~rkl~emqS 31 (417)
.+..+-+.+..|..|.-|....+.+|+.
T Consensus 16 el~~~~~q~~~le~q~~E~~~vl~eL~~ 43 (107)
T d1fxka_ 16 QAQAISVQKQTVEMQINETQKALEELSR 43 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4455667788888888888888888764
No 6
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=41.70 E-value=32 Score=25.41 Aligned_cols=66 Identities=18% Similarity=0.286 Sum_probs=36.1
Q ss_pred hhhHHHHHHhhhhhhhHhhHHHHHHHHHHHHH-HHHHHHHHHHHhhhccchhHHHHHHHHHHHhHHHHHHHHHhhh
Q 039238 18 QKMELDRRLLEMQSTIDSLKDEQKALESALEE-KQNEIKMQREQIDASKENSQLIVLKEILKQREAEIKDLRHQLE 92 (417)
Q Consensus 18 QKmEL~rkl~emqSTi~sLKdeQK~lEsAl~E-Kq~eI~~m~E~~~a~k~~~Qm~aL~E~LkqKEAEiEdlK~rle 92 (417)
+-.+|.....++++.++.|+.+++.+-..+.. +......+ -.++..|++-++..|+++.++...|.
T Consensus 29 ~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l---------~~~~k~lk~~i~~le~~~~~~~~~l~ 95 (110)
T d1seta1 29 ALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEAL---------IARGKALGEEAKRLEEALREKEARLE 95 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777777788888888887777655421 11111111 12444555555555555555555444
No 7
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.14 E-value=58 Score=23.10 Aligned_cols=59 Identities=12% Similarity=0.173 Sum_probs=39.4
Q ss_pred hhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hccchhHHHHHHHHHHHhHHHHHHHHH
Q 039238 31 STIDSLKDEQKALESALEEKQNEIKMQREQID--ASKENSQLIVLKEILKQREAEIKDLRH 89 (417)
Q Consensus 31 STi~sLKdeQK~lEsAl~EKq~eI~~m~E~~~--a~k~~~Qm~aL~E~LkqKEAEiEdlK~ 89 (417)
..+..|...++.++..+...+.+|..+.+.+. ....++....|.+-+......-.+|..
T Consensus 48 ~~v~~l~~~h~~~~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rW~~L~~ 108 (124)
T d1quua1 48 TEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGT 108 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999999999887 333444444554444444444444433
No 8
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=35.31 E-value=38 Score=25.30 Aligned_cols=38 Identities=11% Similarity=0.202 Sum_probs=23.2
Q ss_pred HHHHHhhhhhhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039238 22 LDRRLLEMQSTIDSLKDEQKALESALEEKQNEIKMQRE 59 (417)
Q Consensus 22 L~rkl~emqSTi~sLKdeQK~lEsAl~EKq~eI~~m~E 59 (417)
|.+|+.+++..+..|.+.-+.+++.+.+.+..+.++.+
T Consensus 93 l~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l~~ 130 (133)
T d1fxkc_ 93 IKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELLA 130 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666666666666666666666666666655544
No 9
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=35.29 E-value=68 Score=23.57 Aligned_cols=23 Identities=0% Similarity=0.130 Sum_probs=14.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhh
Q 039238 70 LIVLKEILKQREAEIKDLRHQLE 92 (417)
Q Consensus 70 m~aL~E~LkqKEAEiEdlK~rle 92 (417)
+..|...++..+.++++++..++
T Consensus 81 i~~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 81 EKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666777777766554
No 10
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.19 E-value=65 Score=21.99 Aligned_cols=60 Identities=10% Similarity=0.238 Sum_probs=42.2
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh---hccchhHHHHHHHHHHHhHHHHHHHHHhh
Q 039238 32 TIDSLKDEQKALESALEEKQNEIKMQREQID---ASKENSQLIVLKEILKQREAEIKDLRHQL 91 (417)
Q Consensus 32 Ti~sLKdeQK~lEsAl~EKq~eI~~m~E~~~---a~k~~~Qm~aL~E~LkqKEAEiEdlK~rl 91 (417)
.+..+-..++.++..+...+..|..+...+. ...++++...|++.|......-..|....
T Consensus 33 ~~~~~l~~h~~l~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~I~~~l~~L~~~w~~L~~~~ 95 (106)
T d1s35a1 33 EAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMW 95 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555666777899999999999999999888 23455567777776666555555554443
No 11
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=31.84 E-value=56 Score=29.28 Aligned_cols=19 Identities=26% Similarity=0.410 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 039238 42 ALESALEEKQNEIKMQREQ 60 (417)
Q Consensus 42 ~lEsAl~EKq~eI~~m~E~ 60 (417)
.++..+.+.+.++..+.+.
T Consensus 286 ~le~el~~lee~~~~L~~~ 304 (387)
T d1qvra2 286 AIEAEIAKLTEEIAKLRAE 304 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHH
Confidence 3444444444444444433
No 12
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=31.28 E-value=90 Score=22.74 Aligned_cols=20 Identities=30% Similarity=0.458 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 039238 69 QLIVLKEILKQREAEIKDLR 88 (417)
Q Consensus 69 Qm~aL~E~LkqKEAEiEdlK 88 (417)
++..|.+-|+..++++.++=
T Consensus 79 ~i~~le~~~~~~~~~l~~~l 98 (110)
T d1seta1 79 EAKRLEEALREKEARLEALL 98 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444443
No 13
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.15 E-value=53 Score=23.36 Aligned_cols=59 Identities=10% Similarity=0.147 Sum_probs=40.7
Q ss_pred hhhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hccc--------------hhHHHHHHHHHHHhHHHHHH
Q 039238 28 EMQSTIDSLKDEQKALESALEEKQNEIKMQREQID--ASKE--------------NSQLIVLKEILKQREAEIKD 86 (417)
Q Consensus 28 emqSTi~sLKdeQK~lEsAl~EKq~eI~~m~E~~~--a~k~--------------~~Qm~aL~E~LkqKEAEiEd 86 (417)
+...++..+-..++.+|+.+.-.+..|..+.+.+. ...+ ...-..|...+.++.++||.
T Consensus 34 ~~~~~ve~~l~~h~~~e~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~~~~L~~~W~~L~~~~~~R~~~Le~ 108 (114)
T d1hcia4 34 QITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVET 108 (114)
T ss_dssp TTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456778888899999999999999999988887 1111 23444555566666655553
No 14
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]}
Probab=30.09 E-value=77 Score=21.55 Aligned_cols=51 Identities=14% Similarity=0.226 Sum_probs=34.6
Q ss_pred hhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hccchhHHHHHHHHHHHhH
Q 039238 31 STIDSLKDEQKALESALEEKQNEIKMQREQID--ASKENSQLIVLKEILKQRE 81 (417)
Q Consensus 31 STi~sLKdeQK~lEsAl~EKq~eI~~m~E~~~--a~k~~~Qm~aL~E~LkqKE 81 (417)
..+.+|-..++.++..+...+..|..+...+. ...+++....|.+-+....
T Consensus 36 ~~~~~l~~~h~~~~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~I~~~~~~l~ 88 (107)
T d2spca_ 36 GNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEKRKQVL 88 (107)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 46677888888889989888888888888776 3444544444444443333
No 15
>d1grja1 a.2.1.1 (A:2-79) GreA transcript cleavage protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.30 E-value=1e+02 Score=22.49 Aligned_cols=45 Identities=27% Similarity=0.243 Sum_probs=36.1
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHhHHHHHHHHHhhhccccc
Q 039238 52 NEIKMQREQIDASKENSQLIVLKEILKQREAEIKDLRHQLEYRVNV 97 (417)
Q Consensus 52 ~eI~~m~E~~~a~k~~~Qm~aL~E~LkqKEAEiEdlK~rle~P~~~ 97 (417)
.+|..-++.+ -.+++.+..|-++-+...|+.|-+|...|..-..|
T Consensus 30 ~~I~~Ar~~G-DlsENaeY~aAKe~q~~~e~RI~eLe~~L~~a~II 74 (78)
T d1grja1 30 AAIAEAREHG-DLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVI 74 (78)
T ss_dssp HHHHHHHTTC-CGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHHcC-ChhhhHHHHHHHHHHHHHHHHHHHHHHHHhCceec
Confidence 3444444444 67888899999999999999999999999877766
No 16
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.95 E-value=1.4e+02 Score=23.48 Aligned_cols=11 Identities=36% Similarity=0.495 Sum_probs=4.8
Q ss_pred HhHHHHHHHHH
Q 039238 79 QREAEIKDLRH 89 (417)
Q Consensus 79 qKEAEiEdlK~ 89 (417)
..+.+|++|+.
T Consensus 288 ~l~~ei~~Lk~ 298 (300)
T d1f5na1 288 IMKNEIQDLQT 298 (300)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 33444444444
No 17
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.94 E-value=1.1e+02 Score=22.21 Aligned_cols=62 Identities=11% Similarity=0.044 Sum_probs=41.2
Q ss_pred hhhHhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hccchhHHHHHHHHHHHhHHHHHHHHHhhh
Q 039238 31 STIDSLKDEQKALESALEEKQNEIKMQREQID--ASKENSQLIVLKEILKQREAEIKDLRHQLE 92 (417)
Q Consensus 31 STi~sLKdeQK~lEsAl~EKq~eI~~m~E~~~--a~k~~~Qm~aL~E~LkqKEAEiEdlK~rle 92 (417)
+++..+-..++.++..+...+..|..+.+.+. ...+++....|++-|......-+.|.....
T Consensus 85 ~~~~~~~~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~i~~~l~~l~~~W~~L~~~~~ 148 (156)
T d1owaa_ 85 TNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTL 148 (156)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667778888888888888888888877 344556666666666655555555554443
No 18
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=23.80 E-value=1.6e+02 Score=26.26 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=17.1
Q ss_pred chhhhhhhhhhhhhhh--hhHHHHHHhhhhh
Q 039238 3 RKNEEMKVKLYSLRTQ--KMELDRRLLEMQS 31 (417)
Q Consensus 3 RK~EEmkAK~~sLr~Q--KmEL~rkl~emqS 31 (417)
.++.+|+..+..||.- -..++.++.+++.
T Consensus 6 ~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~ 36 (362)
T d1gqea_ 6 NRIQDLTERSDVLRGYLDYDAKKERLEEVNA 36 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 4566677777666652 3445556666654
No 19
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=21.71 E-value=2.6e+02 Score=24.80 Aligned_cols=31 Identities=13% Similarity=0.258 Sum_probs=13.5
Q ss_pred hhhhhhHHHHHHhhhhhhh--HhhHHHHHHHHH
Q 039238 15 LRTQKMELDRRLLEMQSTI--DSLKDEQKALES 45 (417)
Q Consensus 15 Lr~QKmEL~rkl~emqSTi--~sLKdeQK~lEs 45 (417)
|+.+-.+|+.+|..+...+ +.++.+-++||.
T Consensus 4 l~~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~ 36 (362)
T d1gqea_ 4 VNNRIQDLTERSDVLRGYLDYDAKKERLEEVNA 36 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 3334444444444444432 344444444443
No 20
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=20.84 E-value=1e+02 Score=22.27 Aligned_cols=23 Identities=22% Similarity=0.339 Sum_probs=12.1
Q ss_pred HHHHHHHhHHHHHHHHHhhhccc
Q 039238 73 LKEILKQREAEIKDLRHQLEYRV 95 (417)
Q Consensus 73 L~E~LkqKEAEiEdlK~rle~P~ 95 (417)
|..+.+..+.-.+.|+..+++||
T Consensus 96 l~~~~~~l~~~~~~l~~~~e~pa 118 (118)
T d1r8ea1 96 LSALEQTISLVKKRMKRQMEYPA 118 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC
Confidence 33333333334445667777775
No 21
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.28 E-value=1.3e+02 Score=20.94 Aligned_cols=36 Identities=8% Similarity=0.231 Sum_probs=30.0
Q ss_pred HhhhhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039238 26 LLEMQSTIDSLKDEQKALESALEEKQNEIKMQREQI 61 (417)
Q Consensus 26 l~emqSTi~sLKdeQK~lEsAl~EKq~eI~~m~E~~ 61 (417)
...|+++.+.|....+.|++.|.+.++.|..|...=
T Consensus 7 ~~~l~~~a~~i~~~~~~i~~~l~~L~~~~~~l~~~W 42 (94)
T d1wa8b1 7 FAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAW 42 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356888889999999999999999999999887443
Done!