Query 039244
Match_columns 518
No_of_seqs 188 out of 1223
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 12:52:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039244.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039244hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jgp_A Tyrocidine synthetase 3 100.0 1.1E-31 3.8E-36 287.5 32.0 395 40-505 93-508 (520)
2 1l5a_A Amide synthase, VIBH; n 100.0 9.7E-30 3.3E-34 266.0 37.1 393 46-506 1-407 (436)
3 4hvm_A Tlmii; PSI-biology, mid 100.0 8E-30 2.7E-34 271.2 28.4 399 41-505 11-459 (493)
4 1q9j_A PAPA5, polyketide synth 100.0 1.2E-29 4.2E-34 263.8 25.3 400 40-505 4-415 (422)
5 2vsq_A Surfactin synthetase su 100.0 4.6E-29 1.6E-33 293.9 31.0 399 41-505 10-430 (1304)
6 2xhg_A Tyrocidine synthetase A 100.0 7.5E-27 2.6E-31 246.2 34.5 411 41-508 15-458 (466)
7 3fot_A 15-O-acetyltransferase; 99.6 3.9E-13 1.3E-17 142.0 29.6 418 42-500 29-514 (519)
8 2bgh_A Vinorine synthase; VS, 98.3 3.9E-05 1.3E-09 79.2 19.2 273 42-391 24-322 (421)
9 4g22_A Hydroxycinnamoyl-COA sh 98.3 0.00014 4.6E-09 75.5 23.3 265 42-374 25-318 (439)
10 2xr7_A Malonyltransferase; xen 97.9 0.00062 2.1E-08 70.8 20.9 299 41-392 19-354 (453)
11 2rkv_A Trichothecene 3-O-acety 97.6 0.0097 3.3E-07 61.6 22.7 277 44-374 5-320 (451)
12 2e1v_A Acyl transferase; BAHD 97.6 0.0062 2.1E-07 63.2 21.1 273 41-374 24-331 (454)
13 3rqc_A Probable lipoamide acyl 94.5 1 3.4E-05 41.6 14.9 40 271-310 32-76 (224)
14 2i9d_A Chloramphenicol acetylt 93.7 2.3 7.7E-05 39.0 15.6 39 272-310 31-69 (217)
15 1q23_A Chloramphenicol acetylt 93.2 1 3.6E-05 41.3 12.5 38 272-309 34-71 (219)
16 1scz_A E2, dihydrolipoamide su 92.6 2.1 7.3E-05 39.6 13.8 37 273-309 32-78 (233)
17 3cla_A Type III chloramphenico 91.8 1.4 4.9E-05 40.2 11.3 39 271-309 28-66 (213)
18 1dpb_A Dihydrolipoyl-transacet 91.5 2 6.8E-05 40.1 12.1 38 273-310 43-89 (243)
19 2ii3_A Lipoamide acyltransfera 90.9 4.2 0.00014 38.3 13.8 37 273-309 58-103 (262)
20 3mae_A 2-oxoisovalerate dehydr 90.7 3.6 0.00012 38.6 13.1 37 273-309 46-92 (256)
21 3l60_A Branched-chain alpha-ke 89.6 9.4 0.00032 35.6 15.0 39 271-309 40-83 (250)
22 3b8k_A PDCE2;, dihydrolipoylly 87.9 3.1 0.00011 38.7 10.3 35 274-308 41-83 (239)
23 3qoq_A Alginate and motility r 57.7 19 0.00065 26.2 5.1 35 272-306 24-58 (69)
24 2xt6_A 2-oxoglutarate decarbox 51.6 1.4E+02 0.0047 34.2 13.4 175 269-501 9-220 (1113)
25 1baz_A ARC repressor; transcri 50.2 21 0.00071 24.4 4.1 33 274-306 14-46 (53)
26 2k9i_A Plasmid PRN1, complete 47.3 28 0.00097 23.4 4.6 37 271-311 13-49 (55)
27 2deb_A CPT II, carnitine O-pal 44.8 1E+02 0.0034 32.9 10.4 70 430-511 581-650 (653)
28 1nla_A Transcriptional repress 42.1 33 0.0011 24.5 4.2 33 276-308 16-48 (64)
29 2an7_A Protein PARD; bacterial 39.5 20 0.00067 26.8 2.7 26 276-301 10-35 (83)
30 1p94_A Plasmid partition prote 36.9 45 0.0015 24.7 4.4 33 273-305 40-72 (76)
31 1nm8_A Carnitine O-acetyltrans 36.2 1.3E+02 0.0045 31.8 9.6 69 430-508 529-598 (616)
32 1t1u_A Choline O-acetyltransfe 31.2 1.6E+02 0.0056 31.2 9.4 69 430-508 545-614 (639)
33 2gpe_A Bifunctional protein PU 31.1 87 0.003 20.7 4.9 36 272-311 8-43 (52)
34 3rqc_A Probable lipoamide acyl 30.8 23 0.00078 32.3 2.3 30 169-198 189-218 (224)
35 3cla_A Type III chloramphenico 30.0 22 0.00075 32.2 2.0 25 168-192 182-206 (213)
36 2cpg_A REPA protein, transcrip 29.1 85 0.0029 19.9 4.4 36 271-310 6-41 (45)
37 2i9d_A Chloramphenicol acetylt 28.7 24 0.00081 32.0 2.0 24 168-191 190-213 (217)
38 1q23_A Chloramphenicol acetylt 27.8 25 0.00086 31.9 2.0 25 168-192 186-210 (219)
39 1scz_A E2, dihydrolipoamide su 25.5 24 0.00083 32.4 1.5 30 168-197 197-226 (233)
40 3b8k_A PDCE2;, dihydrolipoylly 23.6 22 0.00075 32.8 0.8 27 167-193 204-230 (239)
41 2ay0_A Bifunctional PUTA prote 23.5 1.2E+02 0.0041 20.9 4.5 36 272-311 8-43 (58)
42 2kel_A SVTR protein, uncharact 23.3 1.4E+02 0.0047 20.5 4.7 34 272-305 18-51 (56)
43 1dpb_A Dihydrolipoyl-transacet 22.7 25 0.00087 32.4 1.0 26 168-193 209-234 (243)
44 2bsq_E FITA, trafficking prote 21.8 99 0.0034 22.9 3.9 28 279-306 13-40 (77)
45 1u9p_A PARC; unknown function; 21.7 92 0.0032 25.2 4.0 34 273-306 24-57 (120)
46 2ii3_A Lipoamide acyltransfera 21.1 31 0.0011 32.3 1.3 26 168-193 225-250 (262)
47 3f42_A Protein HP0035; helicob 20.4 1.5E+02 0.0051 23.0 4.9 38 472-509 46-83 (99)
No 1
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=100.00 E-value=1.1e-31 Score=287.48 Aligned_cols=395 Identities=16% Similarity=0.139 Sum_probs=272.5
Q ss_pred ccccccCChhhhccc-----CCCCceE-EEEEEEcCCCCCHHHHHHHHHHHHccCCccceeecCCCCceeEEe-eecccC
Q 039244 40 TREEEPLSPAARLFH-----EPSFNLY-IIAIMGCKTRICPQVVKANLVHTLLKHPRFYSLQVGDGEMMRWVA-TEVEIE 112 (518)
Q Consensus 40 ~~~~~~Ls~~d~~~~-----~~~~~~~-~~~~~~~~g~ld~~~L~~al~~~~~~~p~lr~~v~~~~g~p~w~~-~~~d~~ 112 (518)
.+...|||+.|+.+| .++...| +...++++|++|.+.|++++..++.+||.||++|....|.|+|+. ++.++.
T Consensus 93 ~~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~ 172 (520)
T 2jgp_A 93 KQAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKLERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHEDVPFA 172 (520)
T ss_dssp CCSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECCCHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECSCCCCC
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCCCHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECCCCCCc
Confidence 356789999999998 4555555 346788889999999999999999999999999986557788777 555554
Q ss_pred CeEEecccCCCcCccchHHHHHHHHHHHhcCCCCCCC-CceEEEEecccCCCCCceEEEEEeccccccccchHHHHHHHh
Q 039244 113 KHVIVPEVDQNMDMKSAEEFVEDYVYHLSKTRIDKSQ-PLWDLHLLNVKTSSESEAVGIFRIHHSLGDGTSLMSLLLACT 191 (518)
Q Consensus 113 ~hv~~~~l~~~~~~~~~~~~l~~~i~~~~~~pld~~~-PlW~~~l~~~~~~~~~~~~lv~r~HH~l~DG~s~~~l~~~l~ 191 (518)
..+. ++. ++++.+ +.+...+|||+.. |+|++.+++. . ++++.+++.+||+++||||+..++.++.
T Consensus 173 ~~~~--~~~--------~~~~~~-~~~~~~~~fdl~~~pl~r~~l~~~-~--~~~~~l~~~~HH~i~Dg~S~~~l~~el~ 238 (520)
T 2jgp_A 173 LAYS--EVT--------EEEARE-LVSSLVQPFDLEVAPLIRVSLLKI-G--EDRYVLFTDMHHSISDGVSSGILLAEWV 238 (520)
T ss_dssp CEEE--ECC--------HHHHHH-HHHHTCCCCCTTSSCCEEEEEEEE-E--TTEEEEEEEEBGGGCCHHHHHHHHHHHH
T ss_pred eEEE--eCC--------HHHHHH-HHHHhcCCCCCCCCcceeEEEEEE-c--CCcEEEEEEccceeecHhHHHHHHHHHH
Confidence 3332 332 334445 6677889999975 9999999985 3 5789999999999999999999999998
Q ss_pred cccCCCCCCCCCCCCCCCCccchhhhhhhHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC--CCCC
Q 039244 192 RQINDPEALPTIPVKNKNKKQQDKERYRGFWNVLMT-----FWSLLQLFWNTAVDIFMFMATAFFLKDTENPLK--GPAG 264 (518)
Q Consensus 192 ~~~~~p~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~ 264 (518)
..+... ..+..+.++ ..+..+... .....+.+|.... .. .+ +....|.. .+..
T Consensus 239 ~~Y~~~-~l~~~~~~~-----------~d~~~~~~~~~~~~~~~~~~~yW~~~l------~~-~~-~~~~lp~~~~~~~~ 298 (520)
T 2jgp_A 239 QLYQGD-VLPELRIQY-----------KDFAVWQQEFSQSAAFHKQEAYWLQTF------AD-DI-PVLNLPTDFTRPST 298 (520)
T ss_dssp HHHTTC-CCCCCSCCH-----------HHHHHHHHHHTTSHHHHHHHHHHHHHT------SS-CC-CCCCCCCSSCCCSS
T ss_pred HHHccC-CCCCCCCCH-----------HHHHHHHHHhhcChhhHHHHHHHHHHh------CC-CC-CcCCCCCCCCCCCC
Confidence 765332 111111110 111111100 0112235665421 10 00 00001111 1110
Q ss_pred CCC--CCeEEEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhhccccccccccCCCCCcceEEEEEeeecCC
Q 039244 265 VEF--TPRRIVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNFPKNMRLRSTLLINLRPT 342 (518)
Q Consensus 265 ~~~--~~r~~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~p~~~~l~~~vPVs~R~~ 342 (518)
... ....+.......+.++++|+++|+|++++++||++.+|++|+++ .++++++|+++|..
T Consensus 299 ~~~~~~~~~~~l~~~~~~~l~~~a~~~~~T~~~~l~aa~a~~L~~~~~~-----------------~dv~~g~~~~gR~~ 361 (520)
T 2jgp_A 299 QSFAGDQCTIGAGKALTEGLHQLAQATGTTLYMVLLAAYNVLLAKYAGQ-----------------EDIIVGTPITGRSH 361 (520)
T ss_dssp CCCBEEEEEEECCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTC-----------------SCEEEEEEECCCCS
T ss_pred CCCCccEEEEeCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC-----------------CCeEEEeccCCCCc
Confidence 000 01222233334678999999999999999999999999999753 37999999999986
Q ss_pred CchhhhhhhhhcccccCCCceEEEEEeeecCCCCCCHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHhhHHHHHHhh
Q 039244 343 AGIQAFADMMEKDTEAKYGNWIGYVLLPFTIGIRDDPLDYVREAKATVDRKKHSFEAIFSFSIAEIVLKLFGTKAASALS 422 (518)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~d~~~rL~~v~~~~~~~k~~~~~~~~~~l~~~~~~~l~~~~~~~~~ 422 (518)
.+. +..+|++++.+++++.++...++.+.+++|++.+.....++..++.. +.+. ++.. +...
T Consensus 362 ~~~-----------~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~h~~~p~~~-i~~~----l~~~--r~~~ 423 (520)
T 2jgp_A 362 ADL-----------EPIVGMFVNTLAMRNKPQREKTFSEFLQEVKQNALDAYGHQDYPFEE-LVEK----LAIA--RDLS 423 (520)
T ss_dssp GGG-----------TTCCSCCCEEEEEEECCCTTSBHHHHHHHHHHHHHHHHHTCCSCHHH-HHHH----TCCC--CCTT
T ss_pred hhh-----------hccEEeeeeeeeEEecCCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHH----hcCC--CCCC
Confidence 543 35699999999999998745567899999999999999998877764 4442 2322 1223
Q ss_pred hccccceeEEEeccCCCCcceeecCceeeEEeeccC--CCCceeEEEEEEeCCEEEEEEEecCCCCC--CHHHHHHHHHH
Q 039244 423 HRIIANTTMCFSNVVGPLEEIGYYGIPMSYLAATSY--GQPHALMINFQSYVNKMTTVLSVDEGTIP--NPHQLCEDIAE 498 (518)
Q Consensus 423 ~~~~~~~~~~~SNvpGp~~~l~~~G~~v~~~~~~~~--~~~~~l~v~v~sy~g~l~i~i~~d~~~~~--d~~~l~~~~~~ 498 (518)
..+++++.+++.|.+ .....+.|..+..+..... ....+|.+.+..++|.+.+.+.|++++++ .++++.+.|..
T Consensus 424 ~~~lf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~L~l~~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~ 501 (520)
T 2jgp_A 424 RNPLFDTVFTFQNST--EEVMTLPECTLAPFMTDETGQHAKFDLTFSATEEREEMTIGVEYSTSLFTRETMERFSRHFLT 501 (520)
T ss_dssp SCSSCSEEEEEECCC--CSCCCCSSEEEEECSSCSSCSBCSSSEEEEEEECSSCEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEEecCC--CccccCCCceeEEeecCCCCcceeeeeEEEEEECCCeEEEEEEEChhhCCHHHHHHHHHHHHH
Confidence 445677777777765 3345667766654422222 45568999999999999999999999997 47888888888
Q ss_pred HHHHHHH
Q 039244 499 SLKLIKD 505 (518)
Q Consensus 499 ~l~~l~~ 505 (518)
.|..+++
T Consensus 502 lL~~l~~ 508 (520)
T 2jgp_A 502 IAASIVQ 508 (520)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888765
No 2
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=99.98 E-value=9.7e-30 Score=266.01 Aligned_cols=393 Identities=11% Similarity=0.039 Sum_probs=266.6
Q ss_pred CChhhhccc-----CCCCceE-EEEEEEcCCCCCHHHHHHHHHHHHccCCccceeecCCCCceeEEeeecccCCeEEecc
Q 039244 46 LSPAARLFH-----EPSFNLY-IIAIMGCKTRICPQVVKANLVHTLLKHPRFYSLQVGDGEMMRWVATEVEIEKHVIVPE 119 (518)
Q Consensus 46 Ls~~d~~~~-----~~~~~~~-~~~~~~~~g~ld~~~L~~al~~~~~~~p~lr~~v~~~~g~p~w~~~~~d~~~hv~~~~ 119 (518)
||+.|+.+| .++...| +...++++|++|.+.|++++..++.+||.||++|....| ++.+..++..++. +
T Consensus 1 Ls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~A~~~lv~rh~~LRt~f~~~~~---~v~~~~~~~~~~~--d 75 (436)
T 1l5a_A 1 MLLAQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQGE---LYWHPFSPPIDYQ--D 75 (436)
T ss_dssp CCGGGHHHHHHHHHSTTSCCSEEEEEEEEESSCCHHHHHHHHHHHHHTCGGGGEEECTTCC---EEECSSCCCCEEE--E
T ss_pred CCHHHHHHHHHHHcCCCCCccceeEEEEEeCCCCHHHHHHHHHHHHHHhheeEEEEEecCC---eECCCcCCCccEE--e
Confidence 799999998 5666666 457889999999999999999999999999999986444 4443333333332 3
Q ss_pred cCCCcCccchHHHHHHHHHHHhcCCCCCCC-CceEEEEecccCCCCCceEEEEEeccccccccchHHHHHHHhcccCC--
Q 039244 120 VDQNMDMKSAEEFVEDYVYHLSKTRIDKSQ-PLWDLHLLNVKTSSESEAVGIFRIHHSLGDGTSLMSLLLACTRQIND-- 196 (518)
Q Consensus 120 l~~~~~~~~~~~~l~~~i~~~~~~pld~~~-PlW~~~l~~~~~~~~~~~~lv~r~HH~l~DG~s~~~l~~~l~~~~~~-- 196 (518)
+...+ ..++++.+++.+...+|||+.+ |+|++.+++. . ++++.+++++||+++||+|+..++.++...+..
T Consensus 76 ~~~~~---~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~-~--~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~ 149 (436)
T 1l5a_A 76 LSIHL---EAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRL-S--HSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLL 149 (436)
T ss_dssp CTTCT---THHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEE-E--TTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC---CHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEEE-c--CCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHh
Confidence 43222 3466788999999999999976 9999999985 3 578999999999999999999999998875421
Q ss_pred -CCCCCCCCCCCCCCccchhhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCeEEEE
Q 039244 197 -PEALPTIPVKNKNKKQQDKERYRGFWNVLM-TFWSLLQLFWNTAVDIFMFMATAFFLKDTENPLKGPAGVEFTPRRIVH 274 (518)
Q Consensus 197 -p~~~~~~p~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~ 274 (518)
....+. +. ..-. ........+.. ......+.+|+..... .... ..-|........+. ....+.+
T Consensus 150 ~g~~~~~-~~----~~~~--~~~~~~~~~~~~~~~~~~~~~W~~~l~~---~~~~--~~lp~~~~~~~~~~--~~~~~~l 215 (436)
T 1l5a_A 150 SGQTPTA-AF----KPYQ--SYLEEEAAYLTSHRYWQDKQFWQGYLRE---APDL--TLTSATYDPQLSHA--VSLSYTL 215 (436)
T ss_dssp HTCCCCC-CC----CCHH--HHHHHHHHHHTSHHHHHHHHHHHHHHHT---SCCC--CBCCTTCCGGGCCE--EEEEEEC
T ss_pred cCCCCCC-Cc----cCHH--HHHHHHHHhhccHhHHHHHHHHHHHhcC---CCCc--ccCCCCCCCCcccc--eeeEEec
Confidence 111111 11 0100 00000000000 0112234567652110 0000 00111000000000 0222333
Q ss_pred eeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhhccccccccccCCCCCcceEEEEEeeecCCCchhhhhhhhhc
Q 039244 275 RTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNFPKNMRLRSTLLINLRPTAGIQAFADMMEK 354 (518)
Q Consensus 275 ~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~p~~~~l~~~vPVs~R~~~~~~~~~~~~~~ 354 (518)
.....+.++++|+++|+|++++++||++.+|++|.+ . ++.+++|+++|...+.
T Consensus 216 ~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~L~~~~g--~----------------dv~ig~~~~~R~~~~~--------- 268 (436)
T 1l5a_A 216 NSQLNHLLLKLANANQIGWPDALVALCALYLESAEP--D----------------APWLWLPFMNRWGSVA--------- 268 (436)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHST--T----------------CCEEEEEECCCTTSGG---------
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhC--C----------------ceEEeeecccCCChHH---------
Confidence 444467899999999999999999999999999954 1 7899999999986543
Q ss_pred ccccCCCceEEEEEeeecCCCCCCHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHhhHHHHHHhhhccccceeEEEe
Q 039244 355 DTEAKYGNWIGYVLLPFTIGIRDDPLDYVREAKATVDRKKHSFEAIFSFSIAEIVLKLFGTKAASALSHRIIANTTMCFS 434 (518)
Q Consensus 355 ~~~~~~gN~~~~~~~~lp~~~~~d~~~rL~~v~~~~~~~k~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~S 434 (518)
...+|++++.+++.+.++...++.+.++++++.+.....++..++.. +.+. ++.. . ...+++++.+++.
T Consensus 269 --~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~~~~h~~~~~~~-i~~~----l~~~--~--~~~~lf~~~~~~~ 337 (436)
T 1l5a_A 269 --ANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQ-IEQD----QGLN--A--EQSYFMSPFINIL 337 (436)
T ss_dssp --GGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHHHHHTTTSCHHH-HHHH----TTCC--T--TCCBCCCSEEEEE
T ss_pred --hcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhcCCCHHH-HHHH----hccc--c--cCCCccceEEEee
Confidence 25689999999999988744567899999999999999998877764 4442 2221 1 1234566667777
Q ss_pred ccCCCCcceeecCceeeEEeeccCCCCceeEEEEE-EeCCEEEEEEEecCCCCC--CHHHHHHHHHHHHHHHHHH
Q 039244 435 NVVGPLEEIGYYGIPMSYLAATSYGQPHALMINFQ-SYVNKMTTVLSVDEGTIP--NPHQLCEDIAESLKLIKDA 506 (518)
Q Consensus 435 NvpGp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~-sy~g~l~i~i~~d~~~~~--d~~~l~~~~~~~l~~l~~~ 506 (518)
|.+.+ .++|..++.......... +|.+.+. .++|.+.+.+.|+++.++ .++++.+.|...|.++.+.
T Consensus 338 ~~~~~----~~~~~~~~~~~~~~~~~~-~l~l~v~~~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~~l~~~ 407 (436)
T 1l5a_A 338 PFESP----HFADCQTELKVLASGSAE-GINFTFRGSPQHELCLDITADLASYPQSHWQSHCERFPRFFEQLLAR 407 (436)
T ss_dssp CCCCC----CCTTCEEEEEEEEECCCC-SEEEEEEECTTSCEEEEEEEETTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcc----ccCCCeeEEEecCCCCcc-ceEEEEEecCCCcEEEEEEeChhhCCHHHHHHHHHHHHHHHHHHHhc
Confidence 76543 677877765443322222 7888887 578999999999999997 4888999999999888765
No 3
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=99.97 E-value=8e-30 Score=271.21 Aligned_cols=399 Identities=11% Similarity=0.040 Sum_probs=251.1
Q ss_pred cccccCChhhhccc-----CCCCceE-EEEEEEcCCCCCHHHHHHHHHHHHccCCccceeecCCCCceeEEe-eecccCC
Q 039244 41 REEEPLSPAARLFH-----EPSFNLY-IIAIMGCKTRICPQVVKANLVHTLLKHPRFYSLQVGDGEMMRWVA-TEVEIEK 113 (518)
Q Consensus 41 ~~~~~Ls~~d~~~~-----~~~~~~~-~~~~~~~~g~ld~~~L~~al~~~~~~~p~lr~~v~~~~g~p~w~~-~~~d~~~ 113 (518)
+..+|||+.|+.+| .++.. | +...++++|++|.++|++++..++.+||.||++|....|.|+ +. +.. +.
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g~ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~-~v~~~~-~~- 86 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSGRIDDDRLAAAADEVLDAFPLLRVNFVDDDGLWM-RTRENA-DA- 86 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEESSCCHHHHHHHHHHHHHHCGGGGEEEEESSSEEE-EECSCC-CC-
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeCCCCHHHHHHHHHHHHHhchhceeEEEccCCEEE-EecCCC-CC-
Confidence 56789999999998 45555 5 557889999999999999999999999999999997667787 54 444 43
Q ss_pred eEEecccCCCcCccchHHHHHHHHHHHhcCCCCCCC-CceEEEEecccCCCCCceEEEEEeccccccccchHHHHHHHhc
Q 039244 114 HVIVPEVDQNMDMKSAEEFVEDYVYHLSKTRIDKSQ-PLWDLHLLNVKTSSESEAVGIFRIHHSLGDGTSLMSLLLACTR 192 (518)
Q Consensus 114 hv~~~~l~~~~~~~~~~~~l~~~i~~~~~~pld~~~-PlW~~~l~~~~~~~~~~~~lv~r~HH~l~DG~s~~~l~~~l~~ 192 (518)
+.+.++...+ ..++++.+++.+...+|||+.+ |+|++.+++. . ++++.+++.+||+++||+|+..++.++..
T Consensus 87 -~~~~d~~~~~---~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~-~--~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~ 159 (493)
T 4hvm_A 87 -LVRSDLRGHP---DPQARCVELLRADRDRPTDPERDPLVRLHLVRL-S--ETDVVLGVVAHQMLLDARSRYMVLGAVWQ 159 (493)
T ss_dssp -EEEEECTTSS---SHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEEC-S--SSEEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred -ceEEECCCCC---chHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEE-C--CCcEEEEEecchhhccHHHHHHHHHHHHH
Confidence 3333454222 3347899999999999999987 9999999985 3 57899999999999999999999999988
Q ss_pred ccCCCCCCCCCCCCCCCC-ccchh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCC
Q 039244 193 QINDPEALPTIPVKNKNK-KQQDK--ERYRGFWNVLMTFWSLLQLFWNTAVDIFMFMATAFFLKDTENPLKGPAGVEFTP 269 (518)
Q Consensus 193 ~~~~p~~~~~~p~~~~~~-~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 269 (518)
.+.. ...+ .++... .+..+ .+... .....+.+|+..... ... + ...|.... . +. .
T Consensus 160 ~Y~g-~~~~---~~~~~~~~~~~~~~~~~~~-------~~~~~~~~W~~~l~~---~~~-l-~~~~~~~~--~-~~---~ 217 (493)
T 4hvm_A 160 AYYG-RFRP---AQYRDFAEVADFHPLDRET-------VRVARHRWWSRRLPA---LPV-R-GGDGGPVG--P-PE---T 217 (493)
T ss_dssp HHTT-CCCG---GGSBCGGGTTTCCTTCSHH-------HHHHHHHHHHHHGGG---SCC-C-C---------C-CE---E
T ss_pred HhCC-CCCC---cCHHHHHHHHhhhhcccCh-------hhHHHHHHHHHhccC---CCC-C-CCCCCCCC--C-Ce---e
Confidence 6521 1111 111110 00000 00000 011123567642110 000 0 11111110 0 21 3
Q ss_pred eEEEEeeechHHHHHHHHHcCCc--hhHHHHHHHHHHHHHH-----------HHHhhccccccccccCCCCCcceEEEEE
Q 039244 270 RRIVHRTVSLDDIKLVKNAMNAT--INDVALGMTQAGLSRY-----------LSRIYEKGQTTQKKNNFPKNMRLRSTLL 336 (518)
Q Consensus 270 r~~~~~~~~l~~lk~ia~~~g~T--vNdvllAa~a~aL~r~-----------~~~~~~~~~~~~~~~~~p~~~~l~~~vP 336 (518)
..+.+.....+.++++|+++|+| ++++++||++.+|++| .++ .++++++|
T Consensus 218 ~~~~l~~~~~~~l~~~a~~~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~-----------------~dv~~g~~ 280 (493)
T 4hvm_A 218 SRLRVPGSRWQALTEPGGPLGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGK-----------------DSLYLSTE 280 (493)
T ss_dssp EEEEEEHHHHHHHHCC------CHHHHHHHHHHHHHHHC---------------------------------CEEEEEEE
T ss_pred EEEEcCHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCC-----------------CCEEEEee
Confidence 34445555667899999999999 9999999999999999 432 38999999
Q ss_pred eeecCCCchhhhhhhhhcccccCCCceEEEEEeeecCCC--CCCHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHhh
Q 039244 337 INLRPTAGIQAFADMMEKDTEAKYGNWIGYVLLPFTIGI--RDDPLDYVREAKATVDRKKHSFEAIFSFSIAEIVLKLFG 414 (518)
Q Consensus 337 Vs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~--~~d~~~rL~~v~~~~~~~k~~~~~~~~~~l~~~~~~~l~ 414 (518)
+++|...+. ...+|++++.+++.+.++. ..++.+.+++|++.+.....+ ..++.. +.+... .++
T Consensus 281 ~~gR~~~~~-----------~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~~h-~~p~~~-i~~~~~-~l~ 346 (493)
T 4hvm_A 281 VDLRDHLQL-----------GSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDAVVH-YLPYHD-VVDLAV-DLG 346 (493)
T ss_dssp EEHHHHTTC-----------CSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHHHHT-CCCHHH-HHHHHH-HTT
T ss_pred ccCCCCcch-----------hcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHHHhh-cCCHHH-HHHHHh-hhC
Confidence 999975432 3569999999999999874 457899999999999999999 877764 444210 122
Q ss_pred HHHHHHhhhccccceeEEEeccCC------CCcceeecCceeeEEeec---c--------------CCCCceeEEEEEEe
Q 039244 415 TKAASALSHRIIANTTMCFSNVVG------PLEEIGYYGIPMSYLAAT---S--------------YGQPHALMINFQSY 471 (518)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~SNvpG------p~~~l~~~G~~v~~~~~~---~--------------~~~~~~l~v~v~sy 471 (518)
.. +.....+++++.+++.|.+. ....+...|..+..+... . ...+..+.+.+..+
T Consensus 347 ~~--~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~l~v~~~ 424 (493)
T 4hvm_A 347 VV--TPPRVAARWDVAVHLCRNAPSSSLTRGERTLAELGVSIELFREADLIGGDTRSATDTWDGTDTWDGTTTDLSVGEL 424 (493)
T ss_dssp SC--BTTBTTGGGCEEECC--------------------CEEEECSHHHHCC-------CCTTCCCCCCCCCEEEEEEEE
T ss_pred cc--cCCCCCcceeEEEEEEecCCccccccccccccCCCceeeeccccccccccccccccccccccccCCcceEEEEEEe
Confidence 21 11223445666666665542 122334556666543220 0 01122388889899
Q ss_pred CCEEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHH
Q 039244 472 VNKMTTVLSVDEGTIP-NPHQLCEDIAESLKLIKD 505 (518)
Q Consensus 472 ~g~l~i~i~~d~~~~~-d~~~l~~~~~~~l~~l~~ 505 (518)
+|.+.+.+.|++.+++ .++.+.+.|...|..+++
T Consensus 425 ~~~l~~~~~y~~~l~~~~i~~l~~~~~~~L~~~~~ 459 (493)
T 4hvm_A 425 GEDMVIVLDQRRTHPAGGGSALLDGLDAAMAQAVA 459 (493)
T ss_dssp TTEEEEEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEccccCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999884 478888888888888864
No 4
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.97 E-value=1.2e-29 Score=263.79 Aligned_cols=400 Identities=13% Similarity=0.062 Sum_probs=247.5
Q ss_pred ccccccCChhhhcccCCCCceEEEEEEEcCCCCCHHHHHHHHHHHHccCCccceeecCCCCceeEEe-eecccCCeEEec
Q 039244 40 TREEEPLSPAARLFHEPSFNLYIIAIMGCKTRICPQVVKANLVHTLLKHPRFYSLQVGDGEMMRWVA-TEVEIEKHVIVP 118 (518)
Q Consensus 40 ~~~~~~Ls~~d~~~~~~~~~~~~~~~~~~~g~ld~~~L~~al~~~~~~~p~lr~~v~~~~g~p~w~~-~~~d~~~hv~~~ 118 (518)
.+..+|||+.|+.||..+ ..+...++++|++|.++|++++...+.+||.||++|....+.++++. +..+.. ++.+.
T Consensus 4 ~~~~~pls~~Q~~~~~~~--y~~~~~~~l~g~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~-~~~~~ 80 (422)
T 1q9j_A 4 GSVIRKLSHSEEVFAQYE--VFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHS-GICVI 80 (422)
T ss_dssp TSEEEECCHHHHHHHHTT--CEEEEEEEEESCCCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSC-CCEEE
T ss_pred CceeecCCHHHHHHHhcC--ceEEEEEEEecCCCHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCC-ceEEE
Confidence 355789999999999433 22456778889999999999999999999999999986556664444 443433 13333
Q ss_pred ccCCCcCccchHHHHHHHHHHHhcCCCCCCCCceEEEEecccCCCCCceEEEEEeccccccccchHHHHHHHhcccC---
Q 039244 119 EVDQNMDMKSAEEFVEDYVYHLSKTRIDKSQPLWDLHLLNVKTSSESEAVGIFRIHHSLGDGTSLMSLLLACTRQIN--- 195 (518)
Q Consensus 119 ~l~~~~~~~~~~~~l~~~i~~~~~~pld~~~PlW~~~l~~~~~~~~~~~~lv~r~HH~l~DG~s~~~l~~~l~~~~~--- 195 (518)
+++ .. ...+++. + ...|||...|+|++.+++ . ++++.+++++||+++||+|+..++.++...+.
T Consensus 81 d~~-~~---~~~~~~~----~-~~~~~d~~~pl~r~~l~~--~--~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~ 147 (422)
T 1q9j_A 81 DGT-AA---TNGSPSG----N-AELRLDQSVSLLHLQLIL--R--EGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAV 147 (422)
T ss_dssp C---------------------CCCCCCTTTCSEEEEEEC--C--SSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECC-CC---Ccchhhh----c-ccCccCCCCCcEEEEEEe--c--CCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhh
Confidence 443 11 1222221 1 357999445999999998 3 57899999999999999999999999887542
Q ss_pred ---CCCCCCCCCCCCCCCccchhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCeE
Q 039244 196 ---DPEALPTIPVKNKNKKQQDKERYRGFWNV-LMTFWSLLQLFWNTAVDIFMFMATAFFLKDTENPLKGPAGVEFTPRR 271 (518)
Q Consensus 196 ---~p~~~~~~p~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~r~ 271 (518)
.+...+. .+...... +..-....... ........+.+|+..... ...++...+.... ..+. ...
T Consensus 148 ~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~----~~~lp~~~~~~~~--~~~~---~~~ 215 (422)
T 1q9j_A 148 TTGDPGPITP--QPTPLSME-AVLAQRGIRKQGLSGAERFMSVMYAYEIPA----TETPAVLAHPGLP--QAVP---VTR 215 (422)
T ss_dssp HSSSCCCCCC--CCCCBCHH-HHHHHSSCCC-----CTTSSTTTTCC-----------------CCSB--CCCC---EEE
T ss_pred ccCCCCCCCC--CCCCCCHH-HHHHhcCCcccccchhhhhhhhhhcccCCC----cccCCCCCCCCCC--CCcc---ceE
Confidence 2211111 11111000 00000000000 000000001344331110 0011111111110 1111 333
Q ss_pred EEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhhccccccccccCCCCCcceEEEEEeeecCCCchhhhhhh
Q 039244 272 IVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNFPKNMRLRSTLLINLRPTAGIQAFADM 351 (518)
Q Consensus 272 ~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~p~~~~l~~~vPVs~R~~~~~~~~~~~ 351 (518)
+.+.....+.++++|+++|+|+|++++||++.+|++|... + . .++.+++|+++|......
T Consensus 216 ~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~l~r~~~~-~-------------~-~~v~~g~~~~~R~~~~~~----- 275 (422)
T 1q9j_A 216 LWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNT-P-------------H-VPIPYVYPVDLRFVLAPP----- 275 (422)
T ss_dssp ECCCHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHTC-S-------------S-CCEEEEEEEETTTTSSSC-----
T ss_pred EEeCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccC-C-------------C-ceEEEeeeeecccccCCC-----
Confidence 3344555688999999999999999999999999998211 1 2 389999999999762100
Q ss_pred hhcccccCCCceEEEEEeeecCCCCCCHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHhhHH-HHHHhh-hccccce
Q 039244 352 MEKDTEAKYGNWIGYVLLPFTIGIRDDPLDYVREAKATVDRKKHSFEAIFSFSIAEIVLKLFGTK-AASALS-HRIIANT 429 (518)
Q Consensus 352 ~~~~~~~~~gN~~~~~~~~lp~~~~~d~~~rL~~v~~~~~~~k~~~~~~~~~~l~~~~~~~l~~~-~~~~~~-~~~~~~~ 429 (518)
.+.....|.+|.+.+.+|++...++.+.++++++.+.+...+....+.. ++.. ...... ..++
T Consensus 276 ---~~~~~~~~~vG~f~n~lp~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~---------l~~~~i~~~~~~~~pl--- 340 (422)
T 1q9j_A 276 ---VAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQSG---------LHFGTAFEGTPPGLPP--- 340 (422)
T ss_dssp ---CCTTTBSCCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHTHHHHSC---------CBGGGGGGCCCSSSCC---
T ss_pred ---CChhhhhhhheeeeeeeeccCCCCHHHHHHHHHHHHHHHHhcCeeeecc---------cchHHHhcccCCCCCc---
Confidence 0001367888888888898755678999999999999988887653210 0100 000110 1122
Q ss_pred eEEEeccCCCCcceeecCceeeEEeeccC-CCCceeEEE-EEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Q 039244 430 TMCFSNVVGPLEEIGYYGIPMSYLAATSY-GQPHALMIN-FQSYVNKMTTVLSVDEGTIPNPHQLCEDIAESLKLIKD 505 (518)
Q Consensus 430 ~~~~SNvpGp~~~l~~~G~~v~~~~~~~~-~~~~~l~v~-v~sy~g~l~i~i~~d~~~~~d~~~l~~~~~~~l~~l~~ 505 (518)
.++|+|+++......++|..+..+..... ....++.+. +.+++|.+.+.+ |+++ .+++++.+.|...|.++++
T Consensus 341 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-y~~~--~~~~~l~~~~~~~L~~l~~ 415 (422)
T 1q9j_A 341 LVFCTDATSFPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEH-HGHI--AEPGKSLEAIRSLLCTVPS 415 (422)
T ss_dssp CEEEECCCCCCSCCCCTTCEEEEEEEEECCBSSCCCCEEEEEEETTEEEEEE-ESSC--SSHHHHHHHHHHHHHHTTT
T ss_pred eEEEecCCcCCCCCCCCCceeEeeecccccCCCCCceEEEEEeeCCeEEEEE-ecCc--cchHHHHHHHHHHHHHhhc
Confidence 57889998765556678888877655432 445677777 778999999999 9988 7899999999999988754
No 5
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.97 E-value=4.6e-29 Score=293.91 Aligned_cols=399 Identities=13% Similarity=0.081 Sum_probs=271.0
Q ss_pred cccccCChhhhccc-----CCCCceE-EEEEEEcCCCCCHHHHHHHHHHHHccCCccceeecC-CCCceeEEe-eecccC
Q 039244 41 REEEPLSPAARLFH-----EPSFNLY-IIAIMGCKTRICPQVVKANLVHTLLKHPRFYSLQVG-DGEMMRWVA-TEVEIE 112 (518)
Q Consensus 41 ~~~~~Ls~~d~~~~-----~~~~~~~-~~~~~~~~g~ld~~~L~~al~~~~~~~p~lr~~v~~-~~g~p~w~~-~~~d~~ 112 (518)
+..+|||+.|+++| +++...| +...++++|++|.++|+++++.++.+||.||++|.. +.+.|+++. ++.++.
T Consensus 10 ~d~~PLS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~ 89 (1304)
T 2vsq_A 10 QDMYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGSLNIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFH 89 (1304)
T ss_dssp EEEEECCHHHHHHHHHHHHSTTSCTTEEEEEEEEEECCCHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCC
T ss_pred CCcCCCCHHHHHHHHHHhhCCCCCceEEEEEEEEcCCcCHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCc
Confidence 45689999999999 5777666 457889999999999999999999999999999985 445687776 555544
Q ss_pred CeEEecccCCCcCccchHHHHHHHHHHHhcCCCCCCC-CceEEEEecccCCCCCceEEEEEeccccccccchHHHHHHHh
Q 039244 113 KHVIVPEVDQNMDMKSAEEFVEDYVYHLSKTRIDKSQ-PLWDLHLLNVKTSSESEAVGIFRIHHSLGDGTSLMSLLLACT 191 (518)
Q Consensus 113 ~hv~~~~l~~~~~~~~~~~~l~~~i~~~~~~pld~~~-PlW~~~l~~~~~~~~~~~~lv~r~HH~l~DG~s~~~l~~~l~ 191 (518)
.++ .++...+ ....++++.+++.+...+|||+++ ||||+.|++. . ++++.+++++||+++||||+..|+.++.
T Consensus 90 ~~~--~d~~~~~-~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~-~--~~~~~l~~~~HHii~DG~S~~~l~~el~ 163 (1304)
T 2vsq_A 90 IEE--IDLTHLT-GSEQTAKINEYKEQDKIRGFDLTRDIPMRAAIFKK-A--EESFEWVWSYHHIILDGWCFGIVVQDLF 163 (1304)
T ss_dssp EEE--EECTTSC-HHHHHHHHHHHHHHHHHHCCCTTTSCSEEEEEEEE-E--TTEEEEEEEEEGGGCCHHHHHHHHHHHH
T ss_pred eEE--EECCCCC-chhHHHHHHHHHHHHhcCCCCCCCCCcEEEEEEEE-C--CCcEEEEEecCceeechhhHHHHHHHHH
Confidence 333 2343111 002356788889999999999987 9999999985 4 5789999999999999999999999988
Q ss_pred cccC-----CCCCCCCCCCCCCCCccchhhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCC
Q 039244 192 RQIN-----DPEALPTIPVKNKNKKQQDKERYRGFWNVLMT-FWSLLQLFWNTAVDIFMFMATAFFLKDTENPLKGPAGV 265 (518)
Q Consensus 192 ~~~~-----~p~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 265 (518)
..|. .+...+..+ ++ ..+..+... .......+|+..... +.. +..-|..+.....+.
T Consensus 164 ~~Y~~~~~g~~~~l~~~~-~y-----------~d~~~~~~~~~~~~~~~yW~~~L~~---~~~--~~~lp~~~~~~~~~~ 226 (1304)
T 2vsq_A 164 KVYNALREQKPYSLPPVK-PY-----------KDYIKWLEKQDKQASLRYWREYLEG---FEG--QTTFAEQRKKQKDGY 226 (1304)
T ss_dssp HHHHHHHTTCCCCCCCCC-CT-----------HHHHHHHHTSCHHHHHHHHHHHHTT---CCC--CCTTTTTCCCSSCCC
T ss_pred HHHHHhhcCCCCCCCCcc-cH-----------HHHHHHHhcchhhHHHHHHHHHhCC---CCc--cccCCCCCCcccccc
Confidence 7541 121111100 10 111111100 011223567652110 000 000011000000010
Q ss_pred CCCCeEEEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhhccccccccccCCCCCcceEEEEEeeecCC--C
Q 039244 266 EFTPRRIVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNFPKNMRLRSTLLINLRPT--A 343 (518)
Q Consensus 266 ~~~~r~~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~p~~~~l~~~vPVs~R~~--~ 343 (518)
......+.+.....+.++++|+++|+|+|++++||++.+|+||+++ .++++++|+++|.. .
T Consensus 227 ~~~~~~~~l~~~~~~~L~~~a~~~~~T~~~vllaa~a~~L~r~tg~-----------------~dvv~G~pvsgR~~~~~ 289 (1304)
T 2vsq_A 227 EPKELLFSPSEAETKAFTELAKSQHTTLSTALQAVWSVLISRYQQS-----------------GDLAFGTVVSGRPAEIK 289 (1304)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTC-----------------SEEEEEEEECCCCTTST
T ss_pred CcceEEEecCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC-----------------CCEEEEEEeCCCCccch
Confidence 0001222234445689999999999999999999999999999754 37999999999976 3
Q ss_pred chhhhhhhhhcccccCCCceEEEEEeeecCCCCCCHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHhhHHHHHHhhh
Q 039244 344 GIQAFADMMEKDTEAKYGNWIGYVLLPFTIGIRDDPLDYVREAKATVDRKKHSFEAIFSFSIAEIVLKLFGTKAASALSH 423 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~d~~~rL~~v~~~~~~~k~~~~~~~~~~l~~~~~~~l~~~~~~~~~~ 423 (518)
+. +..+|++++.+++++.++...+..+.|+++++.+.....++..++.. +.+. ++ .
T Consensus 290 ~~-----------~~~vG~fvntlplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~-i~~~----l~--------~ 345 (1304)
T 2vsq_A 290 GV-----------EHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYD-IQSQ----AD--------Q 345 (1304)
T ss_dssp TG-----------GGCCSSCCEEEEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHH-HHHS----SS--------C
T ss_pred hh-----------hcccccceeEEEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHH-HHHH----hC--------C
Confidence 32 24689999999999988745567899999999999999999887764 4331 11 3
Q ss_pred ccccceeEEEeccCCCC---cceeecCceeeEEeeccCCCCceeEEEEEEeCCEEEEEEEecCCCCC--CHHHHHHHHHH
Q 039244 424 RIIANTTMCFSNVVGPL---EEIGYYGIPMSYLAATSYGQPHALMINFQSYVNKMTTVLSVDEGTIP--NPHQLCEDIAE 498 (518)
Q Consensus 424 ~~~~~~~~~~SNvpGp~---~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~g~l~i~i~~d~~~~~--d~~~l~~~~~~ 498 (518)
.+++++.+++.|.+... ......|..+..+... ....++|++.+. .++.+.+.+.|++++|+ .++++.++|..
T Consensus 346 ~~lf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~dL~l~~~-~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~ 423 (1304)
T 2vsq_A 346 PKLIDHIIVFENYPLQDAKNEESSENGFDMVDVHVF-EKSNYDLNLMAS-PGDEMLIKLAYNENVFDEAFILRLKSQLLT 423 (1304)
T ss_dssp SSSCCCEEEECSSCHHHHSCCCHHHHSEEEEEEEEC-CCCCSSEEEEEE-CSSSCEEEEEEETTTSCHHHHHHHHHHHHH
T ss_pred CcccceeEEEeecccccccccccccCCceeEeeecc-cccccCeEEEEe-cCCcEEEEEEECCccCCHHHHHHHHHHHHH
Confidence 45677778888875211 1112345555443222 234557777664 47889999999999997 48888888888
Q ss_pred HHHHHHH
Q 039244 499 SLKLIKD 505 (518)
Q Consensus 499 ~l~~l~~ 505 (518)
.|..+++
T Consensus 424 lL~~l~~ 430 (1304)
T 2vsq_A 424 AIQQLIQ 430 (1304)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 8888865
No 6
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=99.96 E-value=7.5e-27 Score=246.16 Aligned_cols=411 Identities=12% Similarity=0.067 Sum_probs=246.7
Q ss_pred cccccCChhhhccc---CCCCceE-EEEEEEcCCCCCHHHHHHHHHHHHccCCccceeecCCCCceeEEe-eecccCCeE
Q 039244 41 REEEPLSPAARLFH---EPSFNLY-IIAIMGCKTRICPQVVKANLVHTLLKHPRFYSLQVGDGEMMRWVA-TEVEIEKHV 115 (518)
Q Consensus 41 ~~~~~Ls~~d~~~~---~~~~~~~-~~~~~~~~g~ld~~~L~~al~~~~~~~p~lr~~v~~~~g~p~w~~-~~~d~~~hv 115 (518)
+...|||+.|+.|+ .+....| +...+++.|++|.+.|++++..++.+||.||++|....+.++++. +..+...++
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~ 94 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGFDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQLYDF 94 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCCCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSCCCEE
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCCCHHHHHHHHHHHHHhChHhheEEecCCCceeeecccccccccee
Confidence 45689999999333 4555555 457789999999999999999999999999999997556777776 433444456
Q ss_pred EecccCCCcCccchHHHHHHHHHHHhcCCCCCCC-CceEEEEecccCCCCCceEEEEEeccccccccchHHHHHHHhccc
Q 039244 116 IVPEVDQNMDMKSAEEFVEDYVYHLSKTRIDKSQ-PLWDLHLLNVKTSSESEAVGIFRIHHSLGDGTSLMSLLLACTRQI 194 (518)
Q Consensus 116 ~~~~l~~~~~~~~~~~~l~~~i~~~~~~pld~~~-PlW~~~l~~~~~~~~~~~~lv~r~HH~l~DG~s~~~l~~~l~~~~ 194 (518)
.+.+++ .. .+.++..+.+.+...+|||+.+ |+|++.+++. . ++++ +++.+||+++||+|+..++.++...+
T Consensus 95 ~~~d~~-~~---~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~-~--~~~~-l~l~~HH~i~Dg~S~~~l~~el~~~Y 166 (466)
T 2xhg_A 95 FSYNLT-AQ---PDVQQAIEAETQRLHSSMNLQEGPLVKVALFQT-L--HGDH-LFLAIHHLVVDGISWRILFEDLATGY 166 (466)
T ss_dssp EEEECT-TC---SCHHHHHHHHHHHHHTTCCTTTCCCEEEEEEEE-T--TEEE-EEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred EEEecC-Cc---ccHHHHHHHHHHHHHhccCCCCCCeEEEEEEEc-C--CCCE-EEEEeeeeeechhhHHHHHHHHHHHH
Confidence 555564 22 2333333334566789999976 9999999986 3 3444 88999999999999999999987754
Q ss_pred CC--CCCCCCCCCCCCCCccchhhhhhhHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCC
Q 039244 195 ND--PEALPTIPVKNKNKKQQDKERYRGFWNVLMTF--------WSLLQLFWNTAVDIFMFMATAFFLKDTENPLKGPAG 264 (518)
Q Consensus 195 ~~--p~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 264 (518)
.. ....+..+.. +.. +.++..+. ....+.+|...... .-...++...++.......+
T Consensus 167 ~~~~~g~~~~l~~~--~~~---------y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~--~~~~~lp~~~~~~~~~~~~~ 233 (466)
T 2xhg_A 167 AQALAGQAISLPEK--TDS---------FQSWSQWLQEYANEADLLSEIPYWESLESQ--AKNVSLPKDYEVTDCKQKSV 233 (466)
T ss_dssp HHHHTTCCCCCCCC--CSC---------HHHHHHHHHHHTTSHHHHTTHHHHHHHHHH--CCCCCCCCSSCCSSCBGGGE
T ss_pred HHHHcCCCCCCCCC--CCC---------HHHHHHHHHHHhcCccchhhhHHHHHhhcc--CCcccCCccccccccccccc
Confidence 11 0011111110 001 11111111 11123567653211 00001111111100000000
Q ss_pred CCCCCeEEEEeeechHHHHHHH-HHcCCchhHHHHHHHHHHHHHHHHHhhccccccccccCCCCCcceEEEEEeeecCCC
Q 039244 265 VEFTPRRIVHRTVSLDDIKLVK-NAMNATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNFPKNMRLRSTLLINLRPTA 343 (518)
Q Consensus 265 ~~~~~r~~~~~~~~l~~lk~ia-~~~g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~p~~~~l~~~vPVs~R~~~ 343 (518)
....+.......+.+++.+ +++|+|++++++||++.+|++|+++ .++.+++|+++|...
T Consensus 234 ---~~~~~~l~~~~~~~l~~~~~~~~~~t~~~~llaa~~~~l~~~~~~-----------------~dv~ig~~~~gR~~~ 293 (466)
T 2xhg_A 234 ---RNMRIRLHPEETEQLLKHANQAYQTEINDLLLAALGLAFAEWSKL-----------------AQIVIHLEGHGREDI 293 (466)
T ss_dssp ---EEEEEECCHHHHHHHHHTGGGTTTCCHHHHHHHHHHHHHHHHHCC-----------------SEEEEEEEECCCCSC
T ss_pred ---eEEEEEcCHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhCC-----------------CceEEEecCCCCCcc
Confidence 0112222333345666555 5689999999999999999999743 379999999999863
Q ss_pred chhhhhhhhhcccccCCCceEEEEEeeecCCCCCCHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHhhHHHH-HHhh
Q 039244 344 GIQAFADMMEKDTEAKYGNWIGYVLLPFTIGIRDDPLDYVREAKATVDRKKHSFEAIFSFSIAEIVLKLFGTKAA-SALS 422 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~d~~~rL~~v~~~~~~~k~~~~~~~~~~l~~~~~~~l~~~~~-~~~~ 422 (518)
... ++....+|++++.+++.+.++...++.+.+++|++.+... .+....+. +++. +..... ....
T Consensus 294 ~~~-------~~~~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~-~~~~~~~~--~~~~----l~~~~~~~~~~ 359 (466)
T 2xhg_A 294 IEQ-------ANVARTVGWFTSQYPVLLDLKQTAPLSDYIKLTKENMRKI-PRKGIGYD--ILKH----VTLPENRGSLS 359 (466)
T ss_dssp STT-------CCCTTCCSCCCEEEEEEEECSCCCSHHHHHHHHHHHHHHS-GGGGTHHH--HHHH----TSCGGGSTTCC
T ss_pred ccC-------CCccccccceeeeccEEEecCCCCCHHHHHHHHHHHHHhC-ccCCcccc--eeee----ccccccccccc
Confidence 100 0013568999999999998874557899999999998876 44444433 2232 211100 0000
Q ss_pred hccccceeEEEeccCCCCcceeecCceeeEEeec------------c-CCCCceeEEEEEEeCCEEEEEEEecCCCCC--
Q 039244 423 HRIIANTTMCFSNVVGPLEEIGYYGIPMSYLAAT------------S-YGQPHALMINFQSYVNKMTTVLSVDEGTIP-- 487 (518)
Q Consensus 423 ~~~~~~~~~~~SNvpGp~~~l~~~G~~v~~~~~~------------~-~~~~~~l~v~v~sy~g~l~i~i~~d~~~~~-- 487 (518)
...... +.|+..+.........+..+..+... + ......|.+.+...+|.+.+.+.|++++++
T Consensus 360 ~~~~p~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~y~~~~~~~~ 437 (466)
T 2xhg_A 360 FRVQPE--VTFNYLGQFDADMRTELFTRSPYSGGNTLGADGKNNLSPESEVYTALNITGLIEGGELVLTFSYSSEQYREE 437 (466)
T ss_dssp CCCCCS--EEEEEEEECCTTCSSSSCEECTTCTTCCSSTTCTTSBCTTSBCCCSEEEEEEEETTEEEEEEEEETTTSCHH
T ss_pred ccCCCe--EEEeecCcccccccCCceecccccCccccCcccccccccccCcceeEEEEEEEECCEEEEEEEEChhhCCHH
Confidence 001112 22322221111122223222111000 0 112457888888889999999999999996
Q ss_pred CHHHHHHHHHHHHHHHHHHHH
Q 039244 488 NPHQLCEDIAESLKLIKDAVV 508 (518)
Q Consensus 488 d~~~l~~~~~~~l~~l~~~a~ 508 (518)
.++.+.+.|...|..+++...
T Consensus 438 ~i~~l~~~~~~~L~~l~~~~~ 458 (466)
T 2xhg_A 438 SIQQLSQSYQKHLLAIIAHCL 458 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 578889999988888876543
No 7
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=99.61 E-value=3.9e-13 Score=142.04 Aligned_cols=418 Identities=10% Similarity=-0.007 Sum_probs=202.6
Q ss_pred ccccCChhhhccc------CCCCceEEEEEEEcCCCC----C----HHHHHHHHHHHHccCCccceeecCCC-CceeEEe
Q 039244 42 EEEPLSPAARLFH------EPSFNLYIIAIMGCKTRI----C----PQVVKANLVHTLLKHPRFYSLQVGDG-EMMRWVA 106 (518)
Q Consensus 42 ~~~~Ls~~d~~~~------~~~~~~~~~~~~~~~g~l----d----~~~L~~al~~~~~~~p~lr~~v~~~~-g~p~w~~ 106 (518)
-.+++...+..+. .....+++.+.+++..++ + .+.|++||...=-.||.+.+++..+. +.+.|+-
T Consensus 29 ~~R~~~g~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y 108 (519)
T 3fot_A 29 VQRRCVGAEAIVGLEEKNRRALYDLYIATSLRNIAPASTLLTLQNLKEMFELALLDARFEHPECACTVSWDDEVPAIITY 108 (519)
T ss_dssp EEEECCTHHHHHHCHHHHTTTTTCEEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEE
T ss_pred EEeecCccHHHHHHhhhcCCCcceEEEEEEEEecCCCCccccHHHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEE
Confidence 4677888887776 344567777777765543 3 34566666665568999999988532 2233332
Q ss_pred ----eecccCC----eEEecccCCCcCccchHHHH-HHHHH-HHhcCCCCCCCCceEEEEecccCCC----CC--ceEEE
Q 039244 107 ----TEVEIEK----HVIVPEVDQNMDMKSAEEFV-EDYVY-HLSKTRIDKSQPLWDLHLLNVKTSS----ES--EAVGI 170 (518)
Q Consensus 107 ----~~~d~~~----hv~~~~l~~~~~~~~~~~~l-~~~i~-~~~~~pld~~~PlW~~~l~~~~~~~----~~--~~~lv 170 (518)
.+-+++. -++++.. . .+-+++ .++.. +....-..+ .+.+.+++|...... ++ +..|+
T Consensus 109 ~~~~~~~~~~~Wl~~Tf~v~~~--~----~t~~e~~~~~~~~r~~~~~~~p-~~~~~l~~v~~~~~~~~~~p~~~~~~lv 181 (519)
T 3fot_A 109 ESPESNESARDWARGCIHVQPT--A----KSALDLWSEMEEGRAAANDNTP-SKSIELFLLSDVSTDSTPIPQDATVEIL 181 (519)
T ss_dssp ECCSSHHHHHHHHHHHEEEEEC--S----CCHHHHHHHHHHHHHHTC-CCC-CCSCEEEEEESSSSTTSCCCTTCEEEEE
T ss_pred ecCCCHHHHHHHHHhcEEEeCC--C----CCHHHHHHhhhhhhcccccCCC-ccceEEEEEeccccccccCCCCceEEEE
Confidence 1112211 1111111 1 122222 22211 111111112 278999998542210 23 78999
Q ss_pred EEeccccccccchHHHHHHHhcccCCCC------CCCCCCCCC---CCCccchhhh--h-hhH-HHHHHHHHHHHHHHHH
Q 039244 171 FRIHHSLGDGTSLMSLLLACTRQINDPE------ALPTIPVKN---KNKKQQDKER--Y-RGF-WNVLMTFWSLLQLFWN 237 (518)
Q Consensus 171 ~r~HH~l~DG~s~~~l~~~l~~~~~~p~------~~~~~p~~~---~~~~~~~~~l--~-~~~-~~~~~~~~~~~~~~~~ 237 (518)
|+.||.++||+|+..|+..+++...++. ..+...+.. +-.+.....+ . ... .+..... ..++.
T Consensus 182 ~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~----~~~~~ 257 (519)
T 3fot_A 182 FHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKC----TEYTS 257 (519)
T ss_dssp EEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHH----HHHHH
T ss_pred EEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHH----HHHHH
Confidence 9999999999999999999887533221 111111100 0000000000 0 000 0000001 11111
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCeEEEEeeechHHHHHHHHHc---CCchhHHHHHHHHHHHHHHHHHhhc
Q 039244 238 TAVDIFMFMATAFFLKDTENPLKGPAGVEFTPRRIVHRTVSLDDIKLVKNAM---NATINDVALGMTQAGLSRYLSRIYE 314 (518)
Q Consensus 238 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~l~~lk~ia~~~---g~TvNdvllAa~a~aL~r~~~~~~~ 314 (518)
.+... ... . ..|++...+. ++...+.+.....++|++.||++ |+|||.++.||++.++.++....+
T Consensus 258 ~~~~~---~~~-~-----~~P~~~~~~~-~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~- 326 (519)
T 3fot_A 258 ALVAN---YKS-R-----GMKFQPGLAL-PRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPND- 326 (519)
T ss_dssp HHHHH---HHS-C-----CSBCCCCCCC-EEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC-----
T ss_pred HhhcC---CCc-c-----cCCCCCCCCC-cceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcc-
Confidence 11110 010 1 1122211121 01222333444568899999999 999999999999999998753211
Q ss_pred cccccccccCCCCCcceEEEEEeeecCCCchhhhhhhhhcccccCCCceEEEEEeeecCCC----CCCHHHH-----HHH
Q 039244 315 KGQTTQKKNNFPKNMRLRSTLLINLRPTAGIQAFADMMEKDTEAKYGNWIGYVLLPFTIGI----RDDPLDY-----VRE 385 (518)
Q Consensus 315 ~~~~~~~~~~~p~~~~l~~~vPVs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~----~~d~~~r-----L~~ 385 (518)
.++...+.+.+|||+|+.-+.+ .. ..-.|.....+.+.++.-. ..+..+. +.+
T Consensus 327 ----------~~~~~~~~~~~pvnlR~~l~~~-~~-------~n~~~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~ 388 (519)
T 3fot_A 327 ----------LSDDEVFISPTSVDGRRWLRED-IA-------SNFYAMCQTAAVVRIENLKSITVSHKDEKELQVRALES 388 (519)
T ss_dssp ----------CCTTCCEEEEEEEECGGGBCHH-HH-------TSCCSCCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHH
T ss_pred ----------cCCCccEEEEeeeeccccCCCc-cc-------ccccceeeeeeeeEecCccccccccchhhhhhHhHHHH
Confidence 1222369999999999875422 00 0113555555555554310 0112122 233
Q ss_pred HHHHHHHhhhc-hhhHHHHHHHHHHHHHhhHHHHHHhhhccccceeEEEeccCCCC--cceeec-------CceeeEEee
Q 039244 386 AKATVDRKKHS-FEAIFSFSIAEIVLKLFGTKAASALSHRIIANTTMCFSNVVGPL--EEIGYY-------GIPMSYLAA 455 (518)
Q Consensus 386 v~~~~~~~k~~-~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~SNvpGp~--~~l~~~-------G~~v~~~~~ 455 (518)
+.+.+++.... ...++.. ++..+.+-+................+..+||++--. -+..++ ..+|+++..
T Consensus 389 ~ar~l~~~y~~~~~np~i~-~l~~~~k~~~~~l~~~~~~~~~~~~tp~lSslG~vd~~lp~~y~~~~~~~~~~~V~~~~~ 467 (519)
T 3fot_A 389 ACRNIKKSYRQWLENPFLQ-ALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINERFIPHEIKQTATGENVLSVESIDF 467 (519)
T ss_dssp HHHHHHHHHHHHHTCTTHH-HHHHHHHHHHHHHHHHCSSCCCSBCCCEEEEEEEGGGTSCSEEEETTTTEEEEEEEEEEE
T ss_pred HHHHHHHHhhcccCCchHH-HhHHHHHHHHHHHhcccCCCCCCccCcccccCCccccccchhhccccCCCCceEEEEEEE
Confidence 33333222211 1111111 111111100111111110001112467899986433 334454 257777665
Q ss_pred ccCCCCceeEEEEEEeCCEEEEEEEecCCCCC--CHHHHHHHHHHHH
Q 039244 456 TSYGQPHALMINFQSYVNKMTTVLSVDEGTIP--NPHQLCEDIAESL 500 (518)
Q Consensus 456 ~~~~~~~~l~v~v~sy~g~l~i~i~~d~~~~~--d~~~l~~~~~~~l 500 (518)
........+.+.+.||+|+|+|++.++...+. .++.+.+.+.+.|
T Consensus 468 ~~~~~~~~~~~~~~Tf~g~L~l~~~yn~a~~~~e~v~~~l~~v~~~L 514 (519)
T 3fot_A 468 VVNQSLPYLAIRLDSWRDASTLNIIYNDANYTEAEVQKYLQSIVEFM 514 (519)
T ss_dssp EECCCSSSCEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EccccCCceEEEEEEECCEEEEEEEeccccCCHHHHHHHHHHHHHHH
Confidence 44333446789999999999999999998773 2344444444443
No 8
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=98.26 E-value=3.9e-05 Score=79.17 Aligned_cols=273 Identities=11% Similarity=0.076 Sum_probs=147.0
Q ss_pred ccccCChhhhcccCCCCceEEEEEEEcCCC------CCHHHHHHHHHHHHccCCccceeecC------CCCceeEEe--e
Q 039244 42 EEEPLSPAARLFHEPSFNLYIIAIMGCKTR------ICPQVVKANLVHTLLKHPRFYSLQVG------DGEMMRWVA--T 107 (518)
Q Consensus 42 ~~~~Ls~~d~~~~~~~~~~~~~~~~~~~g~------ld~~~L~~al~~~~~~~p~lr~~v~~------~~g~p~w~~--~ 107 (518)
...+||..|+.. +..++..+.+|..... ...+.|+++|.+.+..++-|.-|++. ...+-.++. .
T Consensus 24 ~~~~LS~lD~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~i~c~~~Gv~fv~A~~ 101 (421)
T 2bgh_A 24 KCYKISHLDQLL--LTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARV 101 (421)
T ss_dssp CCCBCCHHHHTS--CSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEETTTEEECCCCCEEEEEEEE
T ss_pred cccCCChHHhcc--cccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccCCCcEEEEcCCceEEEEEEE
Confidence 467999999852 3344445666665332 13688999999999999999888863 222334444 2
Q ss_pred ecccCCeEEecccCCCcCccchHHHHHHHHHHHhcCCC-------CCCCCceEEEEecccCCCCCceEEEEEeccccccc
Q 039244 108 EVEIEKHVIVPEVDQNMDMKSAEEFVEDYVYHLSKTRI-------DKSQPLWDLHLLNVKTSSESEAVGIFRIHHSLGDG 180 (518)
Q Consensus 108 ~~d~~~hv~~~~l~~~~~~~~~~~~l~~~i~~~~~~pl-------d~~~PlW~~~l~~~~~~~~~~~~lv~r~HH~l~DG 180 (518)
+.+++++.. . .+ .. ..++ ++.-... ..+.|+..+.+-.- . -|+.+|.+.+||+++||
T Consensus 102 d~~l~~~~~---~--~p---~~-~~~~----~l~p~~~~~~~~~~~~~~pll~vQvt~f-~--cgG~~lg~~~~H~v~Dg 165 (421)
T 2bgh_A 102 QAQLSQAIQ---N--VV---EL-EKLD----QYLPSAAYPGGKIEVNEDVPLAVKISFF-E--CGGTAIGVNLSHKIADV 165 (421)
T ss_dssp SSCHHHHHS---C--CS---SG-GGGG----GGSSSCSSSSSSSCCCTTCSEEEEEEEC-T--TSCEEEEEEEETTTCCH
T ss_pred cCCHHHHhc---c--CC---Ch-HHHH----hcCCCCCCccccccccCCceEEEEEEEE-c--CCCEEEEEEeeEEechH
Confidence 223322211 0 01 11 1111 2221111 22358765555543 2 26799999999999999
Q ss_pred cchHHHHHHHhccc-CCCCCCCCCCCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 039244 181 TSLMSLLLACTRQI-NDPEALPTIPVKNKNKKQQDKERYRGFWNVLMTFWSLLQLFWNTAVDIFMFMATAFFLKDTENPL 259 (518)
Q Consensus 181 ~s~~~l~~~l~~~~-~~p~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 259 (518)
.|+..|+......+ +.+.. ..| .+. + + .. + ... +...|..+.
T Consensus 166 ~~~~~fl~~wa~~~rg~~~~----~~P----~~d-----r-~-~~--------------l------~p~--~~~~~~~~~ 208 (421)
T 2bgh_A 166 LSLATFLNAWTATCRGETEI----VLP----NFD-----L-A-AR--------------H------FPP--VDNTPSPEL 208 (421)
T ss_dssp HHHHHHHHHHHHHHTTCSCC----CCC----BCS-----H-H-HH--------------H------SCC--CTTCCCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCC----CCC----ccc-----c-c-cc--------------c------CCC--cccCCCCcc
Confidence 99999998765532 22211 111 000 0 0 00 0 000 000011000
Q ss_pred CCCCCCCCCCeEEEEeeechHHHHHHHHH----cCCchhHHHHHHHHHHHHHHHHHhhccccccccccCCCCCcceEEEE
Q 039244 260 KGPAGVEFTPRRIVHRTVSLDDIKLVKNA----MNATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNFPKNMRLRSTL 335 (518)
Q Consensus 260 ~~~~~~~~~~r~~~~~~~~l~~lk~ia~~----~g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~p~~~~l~~~v 335 (518)
. . ......+.|.+..-.+++||+.+.. ..+|-+|++.|.+-.++.+-..... .++ ...++.+
T Consensus 209 ~-~-~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~-----------~~~-~~~~l~~ 274 (421)
T 2bgh_A 209 V-P-DENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKY-----------GAK-NKFVVVQ 274 (421)
T ss_dssp C-C-CSSEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHS-----------CCC-SCEEEEE
T ss_pred C-C-ccceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccC-----------CCC-CceEEEE
Confidence 0 0 1101134454555556666665543 3489999999987777665543211 122 3688999
Q ss_pred EeeecCCCchhhhhhhhhcccccCCCceEEEEEeeecCCCCCCHHHHHHHHHHHHH
Q 039244 336 LINLRPTAGIQAFADMMEKDTEAKYGNWIGYVLLPFTIGIRDDPLDYVREAKATVD 391 (518)
Q Consensus 336 PVs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~d~~~rL~~v~~~~~ 391 (518)
+||+|...+.. =+...+||.+.......+.+...+.......|++.+.
T Consensus 275 ~vd~R~rl~pp--------lP~~y~GN~~~~~~~~~~~~~~~~l~~~a~~ir~ai~ 322 (421)
T 2bgh_A 275 AVNLRSRMNPP--------LPHYAMGNIATLLFAAVDAEWDKDFPDLIGPLRTSLE 322 (421)
T ss_dssp EEESGGGSSSC--------CCTTBCSCCEEEEEEEECTTCCCCGGGGHHHHHHHTC
T ss_pred EecCccccCCC--------CCCCccceEEEEEEEEecccccccHHHHHHHHHHHHH
Confidence 99999854311 0246799999988888777522222333445555443
No 9
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=98.25 E-value=0.00014 Score=75.46 Aligned_cols=265 Identities=10% Similarity=-0.016 Sum_probs=137.9
Q ss_pred ccccCChhhhcccCCCCceEEEEEEEcCC---CCCHHHHHHHHHHHHccCCccceeecC-CCCceeEE---------e--
Q 039244 42 EEEPLSPAARLFHEPSFNLYIIAIMGCKT---RICPQVVKANLVHTLLKHPRFYSLQVG-DGEMMRWV---------A-- 106 (518)
Q Consensus 42 ~~~~Ls~~d~~~~~~~~~~~~~~~~~~~g---~ld~~~L~~al~~~~~~~p~lr~~v~~-~~g~p~w~---------~-- 106 (518)
...+||..|+.+ +..++..+.+|...+ ....+.|+++|.+.+..++-|.-|++. ..|++... .
T Consensus 25 ~~~~LS~lD~~~--~~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~ 102 (439)
T 4g22_A 25 RNLWNSNVDLVV--PNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAE 102 (439)
T ss_dssp CEECCCHHHHSC--CTTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEEECTTSCEEEECCCCCEEEEEEE
T ss_pred CeecCChhHhCc--cccceeeEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeeeeCCCCCEEEEECCCCCEEEEEE
Confidence 358999999973 233444556666532 235789999999999999999888874 33444332 2
Q ss_pred eecccCCeEEecccCCCcCccchHHHHHHHHHHHhc-CCCC---CCCCceEEEEecccCCCCCceEEEEEeccccccccc
Q 039244 107 TEVEIEKHVIVPEVDQNMDMKSAEEFVEDYVYHLSK-TRID---KSQPLWDLHLLNVKTSSESEAVGIFRIHHSLGDGTS 182 (518)
Q Consensus 107 ~~~d~~~hv~~~~l~~~~~~~~~~~~l~~~i~~~~~-~pld---~~~PlW~~~l~~~~~~~~~~~~lv~r~HH~l~DG~s 182 (518)
.+.+++++- .. .| . ..+ .++.- .+.+ .+.|+..+.+-.- . .|+.+|.+.+||+++||.|
T Consensus 103 ~d~~l~~l~---~~--~p---~--~~~----~~l~p~~~~~~~~~~~pll~vQvT~f-~--cGG~~lg~~~~H~v~Dg~~ 165 (439)
T 4g22_A 103 SDGVVDDFG---DF--AP---T--LEL----RRLIPAVDYSQGISSYALLVLQVTYF-K--CGGVSLGVGMRHHAADGFS 165 (439)
T ss_dssp ESSCGGGGT---TC--CC---C--GGG----GGGSCCCCTTSCTTSSCSEEEEEEEC-T--TSCEEEEEEECTTTCCHHH
T ss_pred cCCcHHHhc---CC--CC---C--HHH----HhcCCCCCcccccccCceeEEEEEEe-c--CCCEEEEEEeeeccCcHHH
Confidence 111222110 00 01 1 112 12211 1111 1347766655543 3 2679999999999999999
Q ss_pred hHHHHHHHhccc-CCCCCCCCCCCCCC-----CCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 039244 183 LMSLLLACTRQI-NDPEALPTIPVKNK-----NKKQQDKERYRGFWNVLMTFWSLLQLFWNTAVDIFMFMATAFFLKDTE 256 (518)
Q Consensus 183 ~~~l~~~l~~~~-~~p~~~~~~p~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 256 (518)
+..|+......+ +.+... .|.-.+ ..+... . . ...++. .... ...+.
T Consensus 166 ~~~Fl~~wa~~~rg~~~~~--~P~~dr~~l~~~~pp~~-~-~-~~~~~~-~~~~---------------------~~~~~ 218 (439)
T 4g22_A 166 GLHFINSWSDMARGLDVTL--PPFIDRTLLRARDPPQP-Q-F-QHIEYQ-PPPA---------------------LAVSP 218 (439)
T ss_dssp HHHHHHHHHHHHTTCCCSS--CCBCCGGGGCCCSSCCC-S-S-CCGGGS-CCC---------------------------
T ss_pred HHHHHHHHHHHhCCCCCCC--CCccccccccCCCCCCC-C-c-Cccccc-CCCC---------------------Ccccc
Confidence 999998765532 222111 110000 000000 0 0 000000 0000 00000
Q ss_pred CCCCCCCCCCCCCeEEEEeeechHHHHHHHHHc----CCchhHHHHHHHHHHHHHHHHHhhccccccccccCCCCCcceE
Q 039244 257 NPLKGPAGVEFTPRRIVHRTVSLDDIKLVKNAM----NATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNFPKNMRLR 332 (518)
Q Consensus 257 ~~~~~~~~~~~~~r~~~~~~~~l~~lk~ia~~~----g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~p~~~~l~ 332 (518)
.+...........+.|.+....+++||+.+... .+|-+|++.|.+-.++.+- ++. .++ ...+
T Consensus 219 ~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rA---r~~----------~~~-~~~~ 284 (439)
T 4g22_A 219 QTAASDSVPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKA---RGL----------EVD-QGTK 284 (439)
T ss_dssp ---------CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHH---TTC----------CTT-CEEE
T ss_pred cccccCCcccceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHh---cCC----------CCC-CcEE
Confidence 000000000001345555555666677665443 4899999999776666543 221 133 4789
Q ss_pred EEEEeeecCCCchhhhhhhhhcccccCCCceEEEEEeeecCC
Q 039244 333 STLLINLRPTAGIQAFADMMEKDTEAKYGNWIGYVLLPFTIG 374 (518)
Q Consensus 333 ~~vPVs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~ 374 (518)
+.++||.|...+.+ -+..-+||.+.......+.+
T Consensus 285 l~~~vd~R~rl~Pp--------lp~~Y~GN~v~~~~~~~~~~ 318 (439)
T 4g22_A 285 LYIATDGRARLRPS--------LPPGYFGNVIFTATPIAIAG 318 (439)
T ss_dssp EEEEEECTTTSSSC--------CCTTBCSCCEEEECCEEEHH
T ss_pred EEEEEcccCCCCCC--------CCCCcccceeehhhcceEHH
Confidence 99999999864311 02467999998877766654
No 10
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=97.95 E-value=0.00062 Score=70.76 Aligned_cols=299 Identities=11% Similarity=0.017 Sum_probs=152.0
Q ss_pred cccccCChhhhcccCCCCceEEEEEEEcCCCC------CHHHHHHHHHHHHccCCccceeecC-C--CCceeEEeeeccc
Q 039244 41 REEEPLSPAARLFHEPSFNLYIIAIMGCKTRI------CPQVVKANLVHTLLKHPRFYSLQVG-D--GEMMRWVATEVEI 111 (518)
Q Consensus 41 ~~~~~Ls~~d~~~~~~~~~~~~~~~~~~~g~l------d~~~L~~al~~~~~~~p~lr~~v~~-~--~g~p~w~~~~~d~ 111 (518)
+...+||..|+.+. +..++..+.+|...... ..+.|+++|.+.+..++-|.-|++. . .|++...-.+-+
T Consensus 19 ~~~~~LS~lD~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~- 96 (453)
T 2xr7_A 19 ELTLPLTYFDHVWL-AFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTGN- 96 (453)
T ss_dssp EEEEECCHHHHGGG-GSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEESSTTCCCEEEEETTC-
T ss_pred CceECCCHHHhhhh-hcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEccCCCCCCEEEEecCCC-
Confidence 35679999999654 22345566677754321 2578999999999999999999874 2 444443322100
Q ss_pred CCeEEecccCCCcCccchHHHHHH-------HHHHHhcCCCCC---C-----CCceEEEEecccCCCCCceEEEEEeccc
Q 039244 112 EKHVIVPEVDQNMDMKSAEEFVED-------YVYHLSKTRIDK---S-----QPLWDLHLLNVKTSSESEAVGIFRIHHS 176 (518)
Q Consensus 112 ~~hv~~~~l~~~~~~~~~~~~l~~-------~i~~~~~~pld~---~-----~PlW~~~l~~~~~~~~~~~~lv~r~HH~ 176 (518)
-|.++... .. .+-+++.. .+..+.- ..+. . .|+..+.+-.- . .|+.+|.+.+||+
T Consensus 97 --gv~fv~A~-~~---~~l~~l~~~~~~~~~~~~~l~p-~~~~~~~~~~~~~~pll~vQvT~f-~--cGG~~lg~~~~H~ 166 (453)
T 2xr7_A 97 --SVSVIFSE-SD---MDFNYLIGYHPRNTKDFYHFVP-QLAEPKDAPGVQLAPVLAIQVTLF-P--NHGISIGFTNHHV 166 (453)
T ss_dssp --CCEEEEEE-CC---SCHHHHTCSSCCCGGGGGGGSC-CCCCCEEETTEEECCCEEEEEEEE-T--TTEEEEEEEECTT
T ss_pred --ceEEEEEe-cC---CCHHHhhccCCCChhhhhcCCC-CCCCcccccccccCCeEEEEEEEc-c--CCcEEEEEeeeee
Confidence 11111110 00 11111110 0011111 1111 1 56654444332 2 2679999999999
Q ss_pred cccccchHHHHHHHhccc--CC-CC-CCCC-CCCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 039244 177 LGDGTSLMSLLLACTRQI--ND-PE-ALPT-IPVKNKNKKQQDKERYRGFWNVLMTFWSLLQLFWNTAVDIFMFMATAFF 251 (518)
Q Consensus 177 l~DG~s~~~l~~~l~~~~--~~-p~-~~~~-~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (518)
++||.|+..|+......+ +. +. ..+. .|.-.+..... + ..+.. ..+. ....
T Consensus 167 v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~--p--~~~~~----------~~~~-------~~~~--- 222 (453)
T 2xr7_A 167 AGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKD--P--NGVGM----------SIWN-------EMKK--- 222 (453)
T ss_dssp TCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCC--S--SCHHH----------HTTT-------TGGG---
T ss_pred eechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccC--C--CCcch----------HHHH-------hccc---
Confidence 999999999998765421 12 10 0011 11100100000 0 00100 0000 0000
Q ss_pred cCCCCCCCCCCCCCCCCCeEEEEeeechHHHHHHHHHc-----CCchhHHHHHHHHHHHHHHHHHhhccccccccccCCC
Q 039244 252 LKDTENPLKGPAGVEFTPRRIVHRTVSLDDIKLVKNAM-----NATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNFP 326 (518)
Q Consensus 252 ~~~p~~~~~~~~~~~~~~r~~~~~~~~l~~lk~ia~~~-----g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~p 326 (518)
..................+.|.+....+++||+.+... .+|-+|++.|.+-.++.+-....... ..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~--------~~~ 294 (453)
T 2xr7_A 223 YKHMMKMSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEE--------IDE 294 (453)
T ss_dssp CTTTSCCSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCC--------CCT
T ss_pred cCCccccccccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhcccccc--------CCC
Confidence 00000000000000011567777777788888877652 48999999998877776654331000 013
Q ss_pred CCcceEEEEEeeecCCCchhhhhhhhhcccccCCCceEEEEEeeecCCC--CCCH-HHHHHHHHHHHHH
Q 039244 327 KNMRLRSTLLINLRPTAGIQAFADMMEKDTEAKYGNWIGYVLLPFTIGI--RDDP-LDYVREAKATVDR 392 (518)
Q Consensus 327 ~~~~l~~~vPVs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~--~~d~-~~rL~~v~~~~~~ 392 (518)
+ ....+.++||+|...+.. =+...+||.+.......+.++ ...+ ......|++.+..
T Consensus 295 ~-~~~~l~~~vd~R~rl~pp--------lP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~ 354 (453)
T 2xr7_A 295 N-GMEFFGCAADCRAQFNPP--------LPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRK 354 (453)
T ss_dssp T-SEEEEEEECCTTSCSSSC--------CCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTT
T ss_pred C-cceEEEEEecccccCCCC--------CCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHh
Confidence 3 378899999999864311 024679999988777766641 1133 3334445544443
No 11
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=97.57 E-value=0.0097 Score=61.57 Aligned_cols=277 Identities=13% Similarity=0.013 Sum_probs=135.6
Q ss_pred ccCChhhhcccCCCCceEEEEEEEcCCCC----CHHHHHHHHHHHHccCCccceeecC-C-----CCceeEEeeecccCC
Q 039244 44 EPLSPAARLFHEPSFNLYIIAIMGCKTRI----CPQVVKANLVHTLLKHPRFYSLQVG-D-----GEMMRWVATEVEIEK 113 (518)
Q Consensus 44 ~~Ls~~d~~~~~~~~~~~~~~~~~~~g~l----d~~~L~~al~~~~~~~p~lr~~v~~-~-----~g~p~w~~~~~d~~~ 113 (518)
.+||..|+..--+..++..+.+|....+. -.+.|+++|.+.+..++-|.-|++. . .|.++-...+ ...
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~-~~~- 82 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFE-DVP- 82 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCC-SSC-
T ss_pred ccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecC-CCC-
Confidence 48899888641112344455666643221 1578999999999999999998874 2 2333322111 111
Q ss_pred eEEecccCC---CcCccchHHHHHHH------H-H-HHhc---CCC------CCCCCceEEEEecccCCCCCceEEEEEe
Q 039244 114 HVIVPEVDQ---NMDMKSAEEFVEDY------V-Y-HLSK---TRI------DKSQPLWDLHLLNVKTSSESEAVGIFRI 173 (518)
Q Consensus 114 hv~~~~l~~---~~~~~~~~~~l~~~------i-~-~~~~---~pl------d~~~PlW~~~l~~~~~~~~~~~~lv~r~ 173 (518)
.+.+.+... .+ +-+++... + . .+.. -|. +.+.|+..+.+-- . .|+.+|.+.+
T Consensus 83 ~~~va~~~~d~~~p----~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~-~---~GG~~lg~~~ 154 (451)
T 2rkv_A 83 RVVVKDLRDDPSAP----TIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNF-I---KGGLILTVNG 154 (451)
T ss_dssp EEEEEECTTCTTSC----BHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEE-E---BTEEEEEEEE
T ss_pred eEEEEeCCCCCCCC----CHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEE-e---cCceeeeeee
Confidence 111111210 11 22233221 0 0 1211 111 1125776544432 1 2579999999
Q ss_pred ccccccccchHHHHHHHhccc-CCCCCCCC--CCCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 039244 174 HHSLGDGTSLMSLLLACTRQI-NDPEALPT--IPVKNKNKKQQDKERYRGFWNVLMTFWSLLQLFWNTAVDIFMFMATAF 250 (518)
Q Consensus 174 HH~l~DG~s~~~l~~~l~~~~-~~p~~~~~--~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (518)
||+++||.|+..|+......+ +.+.+... .|.-.+....+ . .. +. .+. . ......
T Consensus 155 ~H~v~Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p--~-~~---~~---~p~-----------~--~~~~~~ 212 (451)
T 2rkv_A 155 QHGAMDMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVP--Y-LE---NY---TIG-----------P--EVDHQI 212 (451)
T ss_dssp ETTTCCHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSC--C-CT---TC---CCC-----------G--GGTTCB
T ss_pred hhccccHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccc--c-cc---cc---CCC-----------c--cccccc
Confidence 999999999999998765532 22210000 00000000000 0 00 00 000 0 000000
Q ss_pred ccCCCCCCCCCCCCCCCCCeEEEEeeechHHHHHHHHHc------CCchhHHHHHHHHHHHHHHHHHhhccccccccccC
Q 039244 251 FLKDTENPLKGPAGVEFTPRRIVHRTVSLDDIKLVKNAM------NATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNN 324 (518)
Q Consensus 251 ~~~~p~~~~~~~~~~~~~~r~~~~~~~~l~~lk~ia~~~------g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~ 324 (518)
....+..............+.|.+..-.+++||+.+... .+|-+|++.|.+-.++.+-.....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~----------- 281 (451)
T 2rkv_A 213 VKADVAGGDAVLTPVSASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERI----------- 281 (451)
T ss_dssp CCTTSCC-------CCEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTS-----------
T ss_pred cCCCCCCCCCCCCCCCceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccC-----------
Confidence 000000000000000011345555666667777766542 389999999988777665531101
Q ss_pred CCCCcceEEEEEeeecCCCchhhhhhhhhcccccCCCceEEEEEeeecCC
Q 039244 325 FPKNMRLRSTLLINLRPTAGIQAFADMMEKDTEAKYGNWIGYVLLPFTIG 374 (518)
Q Consensus 325 ~p~~~~l~~~vPVs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~ 374 (518)
.++ ...++.++||+|+..+. +..-.||.+.......+.+
T Consensus 282 ~~~-~~~~l~~~vd~R~rl~l----------P~~y~GN~~~~~~~~~~~~ 320 (451)
T 2rkv_A 282 DGS-APTEFCRAVDARPAMGV----------SNNYPGLLQNMTYHNSTIG 320 (451)
T ss_dssp CTT-SEEEEEEEEECHHHHTC----------CTTCCSCCEEEEEEEEEHH
T ss_pred CCC-CceEEEEEecccccCCC----------CCCCcccceeeecccCcHH
Confidence 133 47889999999975432 2467999998887766654
No 12
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=97.56 E-value=0.0062 Score=63.15 Aligned_cols=273 Identities=14% Similarity=0.070 Sum_probs=139.8
Q ss_pred cccccCChhhhcccCCCCceEEEEEEEcCCC----C--CHHHHHHHHHHHHccCCccceeec-C--CCCceeEEee-ecc
Q 039244 41 REEEPLSPAARLFHEPSFNLYIIAIMGCKTR----I--CPQVVKANLVHTLLKHPRFYSLQV-G--DGEMMRWVAT-EVE 110 (518)
Q Consensus 41 ~~~~~Ls~~d~~~~~~~~~~~~~~~~~~~g~----l--d~~~L~~al~~~~~~~p~lr~~v~-~--~~g~p~w~~~-~~d 110 (518)
+...+||..|+.+.. ..++..+.+|..... . ..+.|+++|.+.+..++-|.-|++ . +.|++...-. .--
T Consensus 24 ~~~~~LS~lD~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~g 102 (454)
T 2e1v_A 24 DKSLQLTFFDFFWLR-SPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDS 102 (454)
T ss_dssp CEEEECCHHHHTTTT-CCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEEECSSSSSCCEEEECTTCC
T ss_pred CceecCchHHhhhhc-cCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceeeeeccCCCCCEEEEECCCCc
Confidence 356799999996542 234556667775432 1 257899999999999999999987 3 3344433221 000
Q ss_pred cCC---e--EEecccCC-CcCccchHHHHHHHHHHHhcCCCCC--------CCCceEEEEecccCCCCCceEEEEEeccc
Q 039244 111 IEK---H--VIVPEVDQ-NMDMKSAEEFVEDYVYHLSKTRIDK--------SQPLWDLHLLNVKTSSESEAVGIFRIHHS 176 (518)
Q Consensus 111 ~~~---h--v~~~~l~~-~~~~~~~~~~l~~~i~~~~~~pld~--------~~PlW~~~l~~~~~~~~~~~~lv~r~HH~ 176 (518)
+.. . +...++.+ .+ .....+. .+.-. .+. +.|+..+.+-.- . .|+.+|.+.+||+
T Consensus 103 v~fv~A~~~~~l~~l~~~~~---~~~~~~~----~l~p~-~~~~~~~~~~~~~pll~vQvT~f-~--cgG~~lg~~~~H~ 171 (454)
T 2e1v_A 103 VAVTFAECNLDLNELTGNHP---RNCDKFY----DLVPI-LGESTRLSDCIKIPLFSVQVTLF-P--NQGIAIGITNHHC 171 (454)
T ss_dssp EEEEEEEECSCGGGTSSSSC---EEGGGGG----GGSCC-CCCCEECSSCEEEECEEEEEEEE-T--TTEEEEEEEECGG
T ss_pred EEEEEEEeCCCHHHhcCCCC---Ccchhhh----cCCCC-CCCcccccccccCceEEEEEEEe-c--CCcEEEEEEeeee
Confidence 000 0 00011110 00 0111111 22111 111 126654444332 2 2679999999999
Q ss_pred cccccchHHHHHHHhccc--CCC-C--CCCCC-CCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 039244 177 LGDGTSLMSLLLACTRQI--NDP-E--ALPTI-PVKNKNKKQQDKERYRGFWNVLMTFWSLLQLFWNTAVDIFMFMATAF 250 (518)
Q Consensus 177 l~DG~s~~~l~~~l~~~~--~~p-~--~~~~~-p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (518)
++||.|+..|+......+ +.. . ..+.. |.-.+ . ..... +. ..++....... . ...+
T Consensus 172 v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr--~------l~~p~--~~------~~~~~~~~~~~-~-~~~~ 233 (454)
T 2e1v_A 172 LGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR--I------IKYPM--LD------EAYLKRAKVES-F-NEDY 233 (454)
T ss_dssp GCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC--C------CCCHH--HH------HHHHHHTTCTT-H-HHHC
T ss_pred ecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc--c------CCCCC--cc------hHHHHhhhccc-c-cccc
Confidence 999999999998765422 111 0 00011 11001 1 00000 00 00010000000 0 0000
Q ss_pred ccCCCCCCCCCCCCCCCCCeEEEEeeechHHHHHHHHHc-----CCchhHHHHHHHHHHHHHHHHHhhccccccccccCC
Q 039244 251 FLKDTENPLKGPAGVEFTPRRIVHRTVSLDDIKLVKNAM-----NATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNNF 325 (518)
Q Consensus 251 ~~~~p~~~~~~~~~~~~~~r~~~~~~~~l~~lk~ia~~~-----g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~~ 325 (518)
..+. +..+.. ...+.|.+....+++||+.+... .+|-+|++.|.+-.++.+-. .
T Consensus 234 --~~~~--~~~~~~--~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~------------ 292 (454)
T 2e1v_A 234 --VTQS--LAGPSD--KLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N------------ 292 (454)
T ss_dssp --CCCC--CCCCCC--EEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C------------
T ss_pred --Cccc--CCCCCC--ceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C------------
Confidence 0010 111111 11445666666677788776543 48999999998877666543 2
Q ss_pred CCCcceEEEEEeeecCCCchhhhhhhhhcccccCCCceEEEEEeeecCC
Q 039244 326 PKNMRLRSTLLINLRPTAGIQAFADMMEKDTEAKYGNWIGYVLLPFTIG 374 (518)
Q Consensus 326 p~~~~l~~~vPVs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~ 374 (518)
+ ...++.++||+|...+.. =+..-+||.+.......+.+
T Consensus 293 -~-~~~~l~~~vd~R~rl~pp--------lP~~Y~GN~~~~~~~~~~~~ 331 (454)
T 2e1v_A 293 -D-KLQLFGFPIDRRARMKPP--------IPTAYFGNCVGGCAAIAKTN 331 (454)
T ss_dssp -C-SEEEEEEEEECGGGSSSC--------CCTTBCSCCEEEEEEEEEGG
T ss_pred -C-CceEEEEEecchhccCCC--------CCcccccceeeeEEeecchh
Confidence 1 368899999999854311 02467999999888877775
No 13
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=94.47 E-value=1 Score=41.61 Aligned_cols=40 Identities=13% Similarity=0.152 Sum_probs=31.8
Q ss_pred EEEEeeechHHHHHHHHH-----cCCchhHHHHHHHHHHHHHHHH
Q 039244 271 RIVHRTVSLDDIKLVKNA-----MNATINDVALGMTQAGLSRYLS 310 (518)
Q Consensus 271 ~~~~~~~~l~~lk~ia~~-----~g~TvNdvllAa~a~aL~r~~~ 310 (518)
-..+..+++..+.+..++ .+.|+|+.++-|++.||.++-.
T Consensus 32 ~~~~~evDvt~l~~~r~~~k~~g~kls~~~~~ikA~~~Al~~~P~ 76 (224)
T 3rqc_A 32 FTVMEEVDVTSMVSILDSAKARNRKVTVTGFLARIVPSILKQYPY 76 (224)
T ss_dssp EEEEECCBTHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHHHHSGG
T ss_pred EEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHH
Confidence 345678888888887665 4679999999999999998743
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=93.74 E-value=2.3 Score=38.97 Aligned_cols=39 Identities=8% Similarity=-0.085 Sum_probs=34.4
Q ss_pred EEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH
Q 039244 272 IVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLS 310 (518)
Q Consensus 272 ~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~ 310 (518)
..+..+++..+.+.+++.+.|+|+.++=|++.||+++-.
T Consensus 31 ~~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~P~ 69 (217)
T 2i9d_A 31 SITSEVECGGARQRAKAAGQSFFLHYLYAVLRAANEIPE 69 (217)
T ss_dssp EEEEEEECHHHHHHHHHTTCCHHHHHHHHHHHHHHHSGG
T ss_pred EEEEEEEhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCHH
Confidence 346889999999999999999999999999999998743
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=93.25 E-value=1 Score=41.33 Aligned_cols=38 Identities=0% Similarity=-0.135 Sum_probs=33.6
Q ss_pred EEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHH
Q 039244 272 IVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYL 309 (518)
Q Consensus 272 ~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~ 309 (518)
..+.++++.++.+++++.+.|+|+.++=|++.||+++-
T Consensus 34 t~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~P 71 (219)
T 1q23_A 34 NQTVQLDITAFLKTVKKNKHKFYPAFIHILARLMNAHP 71 (219)
T ss_dssp EEEEEEECHHHHHHHHHTTCCHHHHHHHHHHHHHTTCG
T ss_pred EEEEEEEhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCh
Confidence 34688999999999999999999999999999998763
No 16
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=92.64 E-value=2.1 Score=39.61 Aligned_cols=37 Identities=14% Similarity=0.197 Sum_probs=27.1
Q ss_pred EEeeechHHHHHHHHH----------cCCchhHHHHHHHHHHHHHHH
Q 039244 273 VHRTVSLDDIKLVKNA----------MNATINDVALGMTQAGLSRYL 309 (518)
Q Consensus 273 ~~~~~~l~~lk~ia~~----------~g~TvNdvllAa~a~aL~r~~ 309 (518)
.+..+++..+.+..++ .+.|+|+.++-|++.||.++-
T Consensus 32 ~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P 78 (233)
T 1scz_A 32 TFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYP 78 (233)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCT
T ss_pred EEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhCh
Confidence 4566666665554221 589999999999999998773
No 17
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=91.83 E-value=1.4 Score=40.20 Aligned_cols=39 Identities=5% Similarity=0.085 Sum_probs=33.9
Q ss_pred EEEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHH
Q 039244 271 RIVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYL 309 (518)
Q Consensus 271 ~~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~ 309 (518)
-..+.++++.++.+++++.+.|+|+.++=|++.||+++-
T Consensus 28 ~~~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~P 66 (213)
T 3cla_A 28 FSLTSKIDITTLKKSLDDSAYKFYPVMIYLIAQAVNQFD 66 (213)
T ss_dssp EEEEEEEECHHHHHHHHTSSCCHHHHHHHHHHHHHTTCG
T ss_pred EEEEEEEEHHHHHHHHHHhCCCHHHHHHHHHHHHHhhCH
Confidence 334688999999999999999999999999999998763
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=91.49 E-value=2 Score=40.11 Aligned_cols=38 Identities=11% Similarity=0.147 Sum_probs=27.7
Q ss_pred EEeeechHHHHHHH---HH------cCCchhHHHHHHHHHHHHHHHH
Q 039244 273 VHRTVSLDDIKLVK---NA------MNATINDVALGMTQAGLSRYLS 310 (518)
Q Consensus 273 ~~~~~~l~~lk~ia---~~------~g~TvNdvllAa~a~aL~r~~~ 310 (518)
.+..+++..+.+.. ++ .+.|+++.++-|++.||+++-.
T Consensus 43 ~~~evDvt~l~~~r~~~k~~~~~~g~kls~~~~~ikA~~~Al~~~P~ 89 (243)
T 1dpb_A 43 QFESADITELEAFRVAQKAVAEKAGVKLTVLPLLLKACAYLLKELPD 89 (243)
T ss_dssp EEEEEECHHHHHHHHHTHHHHHHTTCCCCSHHHHHHHHHHHHHHSGG
T ss_pred EEEEEEhHHHHHHHHHHhhhhhhccCCCChHHHHHHHHHHHHHhChH
Confidence 45666666655542 22 5899999999999999998743
No 19
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=90.88 E-value=4.2 Score=38.33 Aligned_cols=37 Identities=14% Similarity=0.239 Sum_probs=27.3
Q ss_pred EEeeechHHHHHHHHH---------cCCchhHHHHHHHHHHHHHHH
Q 039244 273 VHRTVSLDDIKLVKNA---------MNATINDVALGMTQAGLSRYL 309 (518)
Q Consensus 273 ~~~~~~l~~lk~ia~~---------~g~TvNdvllAa~a~aL~r~~ 309 (518)
.+..+++..+.++.++ .+.|+|+.++-|++.||+++-
T Consensus 58 ~~~evDvt~l~~~r~~~k~~~~~~g~kls~~~~~ikAva~Al~~~P 103 (262)
T 2ii3_A 58 YCDEVDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFP 103 (262)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHCG
T ss_pred EEEEEEhHHHHHHHHHHhhhhhhccCCccHHHHHHHHHHHHHHhCh
Confidence 4566666665554222 479999999999999999774
No 20
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=90.70 E-value=3.6 Score=38.61 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=26.4
Q ss_pred EEeeechHHHHHHHH----------HcCCchhHHHHHHHHHHHHHHH
Q 039244 273 VHRTVSLDDIKLVKN----------AMNATINDVALGMTQAGLSRYL 309 (518)
Q Consensus 273 ~~~~~~l~~lk~ia~----------~~g~TvNdvllAa~a~aL~r~~ 309 (518)
.+..+++..+.++.+ ..+.|+|+.++-|++.||+++-
T Consensus 46 ~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P 92 (256)
T 3mae_A 46 MMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFP 92 (256)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCT
T ss_pred EEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCH
Confidence 445666655544422 2468999999999999998773
No 21
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=89.63 E-value=9.4 Score=35.61 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=30.1
Q ss_pred EEEEeeechHHHHHHHHH-----cCCchhHHHHHHHHHHHHHHH
Q 039244 271 RIVHRTVSLDDIKLVKNA-----MNATINDVALGMTQAGLSRYL 309 (518)
Q Consensus 271 ~~~~~~~~l~~lk~ia~~-----~g~TvNdvllAa~a~aL~r~~ 309 (518)
-..+..+++..+.+++++ .+.|+|+.++-|++.||.++-
T Consensus 40 ~~~~~evDvt~l~~~r~~~k~~~~kls~~~~iikAva~AL~~~P 83 (250)
T 3l60_A 40 AKASVEVICAELLRLRDRFVSAAPEITPFALTLRLLVIALKHNV 83 (250)
T ss_dssp EEEEEEEECHHHHHHHHHHTTTCTTCCHHHHHHHHHHHHHHHCG
T ss_pred EEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCH
Confidence 334577888777777654 367999999999999999874
No 22
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=87.90 E-value=3.1 Score=38.68 Aligned_cols=35 Identities=14% Similarity=0.285 Sum_probs=25.3
Q ss_pred EeeechHHHHHHHHH--------cCCchhHHHHHHHHHHHHHH
Q 039244 274 HRTVSLDDIKLVKNA--------MNATINDVALGMTQAGLSRY 308 (518)
Q Consensus 274 ~~~~~l~~lk~ia~~--------~g~TvNdvllAa~a~aL~r~ 308 (518)
+..+++..+.+..++ .+.|+|+.++-|++.||+++
T Consensus 41 ~~evDvt~l~~~r~~~k~~~~~~~kls~~~~~ikAv~~Al~~~ 83 (239)
T 3b8k_A 41 SIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKV 83 (239)
T ss_dssp EEEECCTTHHHHHHHTHHHHTTSSCCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHhC
Confidence 345555555444322 58999999999999999876
No 23
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=57.69 E-value=19 Score=26.23 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=28.6
Q ss_pred EEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 039244 272 IVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLS 306 (518)
Q Consensus 272 ~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~ 306 (518)
+.++.-.-++|+..|++.|.|+|..+..++..+|.
T Consensus 24 LRlP~eL~~~L~~~A~~~grSlNaeIv~~Le~sl~ 58 (69)
T 3qoq_A 24 VRLPEGMREQIAEVARSHHRSMNSEIIARLEQSLL 58 (69)
T ss_dssp EECCTTHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 34455566899999999999999999998776665
No 24
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=51.57 E-value=1.4e+02 Score=34.15 Aligned_cols=175 Identities=12% Similarity=0.063 Sum_probs=0.0
Q ss_pred CeEEEEeeechHHHHHHHHHc----------CCchhHHHHHHHHHHHHHHHHHhhccccccccccC-------CCCCcce
Q 039244 269 PRRIVHRTVSLDDIKLVKNAM----------NATINDVALGMTQAGLSRYLSRIYEKGQTTQKKNN-------FPKNMRL 331 (518)
Q Consensus 269 ~r~~~~~~~~l~~lk~ia~~~----------g~TvNdvllAa~a~aL~r~~~~~~~~~~~~~~~~~-------~p~~~~l 331 (518)
.....+..+++..+.++.+.. +.|+++.++-|++.||+++-.-.. .++.. ..+ .+
T Consensus 9 P~~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na------~~~~~~~~~~i~~~~--~v 80 (1113)
T 2xt6_A 9 PTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNR------HFAVVDGKPTAITPA--HT 80 (1113)
T ss_dssp CEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGGGC------EEEESSSSEEEECCS--SC
T ss_pred CeEEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHhhE------EEeccCCCceEEEeC--cc
Q ss_pred EEEEEeeecCCCchhhhhhhhhcccccCCCceEEEEEeeecCCCCCCHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHH
Q 039244 332 RSTLLINLRPTAGIQAFADMMEKDTEAKYGNWIGYVLLPFTIGIRDDPLDYVREAKATVDRKKHSFEAIFSFSIAEIVLK 411 (518)
Q Consensus 332 ~~~vPVs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~lp~~~~~d~~~rL~~v~~~~~~~k~~~~~~~~~~l~~~~~~ 411 (518)
.+++.|+.-... |+ -+.+.-.+.-....+..+..+.+++...+++..
T Consensus 81 nigiAV~t~~~~-----------------G~-~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~g--------------- 127 (1113)
T 2xt6_A 81 NLGLAIDLQGKD-----------------GN-RSLVVAAIKRCETMRFGQFIAAYEDIVRRARDG--------------- 127 (1113)
T ss_dssp CEEEEC-----------------------------CEEEECCGGGCCHHHHHHHHHHHHHHHTTT---------------
T ss_pred cEEEEEeccCCC-----------------Cc-eeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcC---------------
Q ss_pred HhhHHHHHHhhhccccceeEEEeccCCCCcceeecCceeeEEeeccCCCCce-eEEEEEEeC----C-------------
Q 039244 412 LFGTKAASALSHRIIANTTMCFSNVVGPLEEIGYYGIPMSYLAATSYGQPHA-LMINFQSYV----N------------- 473 (518)
Q Consensus 412 ~l~~~~~~~~~~~~~~~~~~~~SNvpGp~~~l~~~G~~v~~~~~~~~~~~~~-l~v~v~sy~----g------------- 473 (518)
++...-+...++++||+|.. -+..+.|....+..+ |+++-+... +
T Consensus 128 --------kL~~~d~~ggTftISNlG~~---------G~~~~tPIinppq~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~ 190 (1113)
T 2xt6_A 128 --------KLTAEDFSGVTISLTNPGTL---------GTVHSVPRLMQGQGAIIGAGAMEYPAEFQGASEERIADLGIGK 190 (1113)
T ss_dssp --------CCCGGGTSCCSEEEECC---------------------CTTCSEEEEECCCBCCTTSTTCCHHHHHHHTCCC
T ss_pred --------CCCccccCCCEEEEeCCCcC---------CCcceECCCCCCCceEEEcCccEEEeEEcCCCcccCCceeEee
Q ss_pred EEEEEEEecCCCCC--CHHHHHHHHHHHHH
Q 039244 474 KMTTVLSVDEGTIP--NPHQLCEDIAESLK 501 (518)
Q Consensus 474 ~l~i~i~~d~~~~~--d~~~l~~~~~~~l~ 501 (518)
.+.+++++|.+++. +..+|...|.+.|+
T Consensus 191 ~m~lsls~DHRviDGa~aa~FL~~lk~~Le 220 (1113)
T 2xt6_A 191 LITLTSTYDHRIIQGAESGDFLRTIHQLLL 220 (1113)
T ss_dssp EEEEEEEEETTTCCHHHHHHHHHHHHHHTT
T ss_pred eeEEEEEECcceechHHHHHHHHHHHHHHh
No 25
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=50.17 E-value=21 Score=24.39 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=25.9
Q ss_pred EeeechHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 039244 274 HRTVSLDDIKLVKNAMNATINDVALGMTQAGLS 306 (518)
Q Consensus 274 ~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~ 306 (518)
+++..-+.|+..|+..|.|+|..+..++..++.
T Consensus 14 lp~eL~~~l~~~A~~~grS~N~~i~~~L~~~l~ 46 (53)
T 1baz_A 14 WPREVLDLVRKVAEENGRSVNSEIYQRVMESFK 46 (53)
T ss_dssp CCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 344445789999999999999999988766554
No 26
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=47.29 E-value=28 Score=23.36 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=27.7
Q ss_pred EEEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 039244 271 RIVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLSR 311 (518)
Q Consensus 271 ~~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~~ 311 (518)
.+.+.....+.|..+|+..|.|.++++--|+ ..|+..
T Consensus 13 ~vrl~~el~~~l~~~a~~~g~s~s~~ir~ai----~~~l~~ 49 (55)
T 2k9i_A 13 GVYIPQEWHDRLMEIAKEKNLTLSDVCRLAI----KEYLDN 49 (55)
T ss_dssp EEEECHHHHHHHHHHHHHHTCCHHHHHHHHH----HHHHHH
T ss_pred EEEcCHHHHHHHHHHHHHhCCCHHHHHHHHH----HHHHHH
Confidence 3445666678999999999999999876654 555544
No 27
>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*
Probab=44.77 E-value=1e+02 Score=32.95 Aligned_cols=70 Identities=16% Similarity=0.105 Sum_probs=47.5
Q ss_pred eEEEeccCCCCcceeecCceeeEEeeccCCCCceeEEEEEEeCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 039244 430 TMCFSNVVGPLEEIGYYGIPMSYLAATSYGQPHALMINFQSYVNKMTTVLSVDEGTIPNPHQLCEDIAESLKLIKDAVVA 509 (518)
Q Consensus 430 ~~~~SNvpGp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~g~l~i~i~~d~~~~~d~~~l~~~~~~~l~~l~~~a~~ 509 (518)
-+.-||+|++.. ..+.+.+..+.+.+|+-.-.++.+.++|++-. -.+.++|.+.++++|.++.+....
T Consensus 581 ~LSTS~~~~~~~----------~~~gfgPv~~dGyGi~Y~i~~~~i~f~iSs~~--~t~~~~F~~~L~~al~dm~~ll~~ 648 (653)
T 2deb_A 581 ILSTSTLNSPAV----------SLGGFAPVVPDGFGIAYAVHDDWIGCNVSSYS--GRNAREFLHCVQKCLEDIFDALEG 648 (653)
T ss_dssp SEEEEECCCTTE----------EEEECCCSSTTCEEEEEEECSSCEEEEEEECT--TSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCCCCcc----------ccceeeccCCCceEEEEEecCCeEEEEEEeCC--CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 467788876431 12223333334555555555789999999764 348999999999999999887665
Q ss_pred cC
Q 039244 510 SG 511 (518)
Q Consensus 510 ~~ 511 (518)
..
T Consensus 649 ~~ 650 (653)
T 2deb_A 649 KA 650 (653)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 28
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon, beta-sheet, structural switching; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=42.10 E-value=33 Score=24.51 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=26.4
Q ss_pred eechHHHHHHHHHcCCchhHHHHHHHHHHHHHH
Q 039244 276 TVSLDDIKLVKNAMNATINDVALGMTQAGLSRY 308 (518)
Q Consensus 276 ~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~ 308 (518)
.-.-+.++..|++.|.|+|.-+..++..++...
T Consensus 16 ~eLh~~l~~~A~~~GrSlN~~Iv~~L~~~l~~~ 48 (64)
T 1nla_A 16 REVLDLVRKVAEENGRSVNSEIYQRVMESFKKE 48 (64)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcc
Confidence 334478889999999999999999987776543
No 29
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=39.55 E-value=20 Score=26.75 Aligned_cols=26 Identities=19% Similarity=0.151 Sum_probs=21.5
Q ss_pred eechHHHHHHHHHcCCchhHHHHHHH
Q 039244 276 TVSLDDIKLVKNAMNATINDVALGMT 301 (518)
Q Consensus 276 ~~~l~~lk~ia~~~g~TvNdvllAa~ 301 (518)
+-.=..+|++|+..|.|+|+++.-.+
T Consensus 10 d~qH~rLKalAa~qG~SInqli~E~l 35 (83)
T 2an7_A 10 DQQHQSLKALAALQGKTIKQYALERL 35 (83)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHc
Confidence 33346899999999999999988764
No 30
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=36.93 E-value=45 Score=24.72 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=24.7
Q ss_pred EEeeechHHHHHHHHHcCCchhHHHHHHHHHHH
Q 039244 273 VHRTVSLDDIKLVKNAMNATINDVALGMTQAGL 305 (518)
Q Consensus 273 ~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL 305 (518)
.+...--.++|.+|...|.|++|++--++...|
T Consensus 40 ~i~~~lh~rlK~~Aa~~g~Smsdvvreli~~~L 72 (76)
T 1p94_A 40 NFDEEKHTRFKAACARKGTSITDVVNQLVDNWL 72 (76)
T ss_dssp EEEHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred EcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 344444578999999999999999887754333
No 31
>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A*
Probab=36.16 E-value=1.3e+02 Score=31.77 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=46.6
Q ss_pred eEEEeccCCCCcceeecCceeeEEeeccCCCCceeEEEEEEeCCEEEEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHHH
Q 039244 430 TMCFSNVVGPLEEIGYYGIPMSYLAATSYGQPHALMINFQSYVNKMTTVLSVDEGT-IPNPHQLCEDIAESLKLIKDAVV 508 (518)
Q Consensus 430 ~~~~SNvpGp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~g~l~i~i~~d~~~-~~d~~~l~~~~~~~l~~l~~~a~ 508 (518)
-+.-||+|++... .+.+.+..+.+.+++-.-.++.+.++|++-... -.+.++|.+.++++|.++.+...
T Consensus 529 ~LSTSq~~~~~~~----------~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~ 598 (616)
T 1nm8_A 529 HLSTSQVPAKTDC----------VMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQ 598 (616)
T ss_dssp SEEEEECCCSSSC----------EEECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCCCccC----------ceEEecCCCCeeEEEEEecCCeEEEEEEeCCCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 4677888864311 222333333455555555688999999975432 24899999999999999988655
No 32
>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A*
Probab=31.16 E-value=1.6e+02 Score=31.18 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=46.4
Q ss_pred eEEEeccCCCCcceeecCceeeEEeeccCCCCceeEEEEEEeCCEEEEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHHH
Q 039244 430 TMCFSNVVGPLEEIGYYGIPMSYLAATSYGQPHALMINFQSYVNKMTTVLSVDEGT-IPNPHQLCEDIAESLKLIKDAVV 508 (518)
Q Consensus 430 ~~~~SNvpGp~~~l~~~G~~v~~~~~~~~~~~~~l~v~v~sy~g~l~i~i~~d~~~-~~d~~~l~~~~~~~l~~l~~~a~ 508 (518)
-+.-||+|++... ...+.+..+.+.+|+-.-.++.+.++|++-... -.+.++|.+.++++|.++.+...
T Consensus 545 ~LSTSq~~~~~~~----------~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~ 614 (639)
T 1t1u_A 545 VLSTSQVPTTMEM----------FCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCS 614 (639)
T ss_dssp SEEEEECCCSSSE----------EEECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCccc----------cceEcccCCCceEEEEEEcCCeEEEEEEeCCCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 4677888865311 122333333455555555688999999975432 24899999999999999987654
No 33
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=31.15 E-value=87 Score=20.72 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=27.2
Q ss_pred EEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 039244 272 IVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLSR 311 (518)
Q Consensus 272 ~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~~ 311 (518)
+.......+.|..+|+..|.|.+.++--| +..|+..
T Consensus 8 irl~~~l~~~l~~lA~~~~rs~s~lir~A----i~~yl~~ 43 (52)
T 2gpe_A 8 VKLDDATRERIKSAATRIDRTPHWLIKQA----IFSYLEQ 43 (52)
T ss_dssp EEEEHHHHHHHHHHHHHTTCCHHHHHHHH----HHHHHHH
T ss_pred EECCHHHHHHHHHHHHHHCcCHHHHHHHH----HHHHHHH
Confidence 34455567899999999999999997655 5556554
No 34
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=30.78 E-value=23 Score=32.33 Aligned_cols=30 Identities=23% Similarity=0.371 Sum_probs=25.1
Q ss_pred EEEEeccccccccchHHHHHHHhcccCCCC
Q 039244 169 GIFRIHHSLGDGTSLMSLLLACTRQINDPE 198 (518)
Q Consensus 169 lv~r~HH~l~DG~s~~~l~~~l~~~~~~p~ 198 (518)
+.+.+||-+.||.-+..|+..+-+...+|.
T Consensus 189 lsls~DHRviDGa~aa~Fl~~l~~~le~p~ 218 (224)
T 3rqc_A 189 LSLSCDHRLIDGAVATRFIVDLKKVIEDPN 218 (224)
T ss_dssp EEEEEETTTSCHHHHHHHHHHHHHHHTCTT
T ss_pred EEEEeccceecHHHHHHHHHHHHHHHhCHH
Confidence 789999999999999999988776544554
No 35
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=29.99 E-value=22 Score=32.15 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=22.2
Q ss_pred EEEEEeccccccccchHHHHHHHhc
Q 039244 168 VGIFRIHHSLGDGTSLMSLLLACTR 192 (518)
Q Consensus 168 ~lv~r~HH~l~DG~s~~~l~~~l~~ 192 (518)
-|.+.+||.+.||.-+..++..+-+
T Consensus 182 ~lsls~DHRvvDG~~aa~Fl~~lk~ 206 (213)
T 3cla_A 182 PLSVQVHHAVCDGFHVARFINRLQE 206 (213)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEcccccChHHHHHHHHHHHH
Confidence 5889999999999999999887754
No 36
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=29.13 E-value=85 Score=19.85 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=26.9
Q ss_pred EEEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH
Q 039244 271 RIVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLS 310 (518)
Q Consensus 271 ~~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~ 310 (518)
.+.++.-.++.|.++|+..|.|-+.++-.| +..|+.
T Consensus 6 tv~l~~~l~~~Ld~~a~~~g~srS~~ir~a----i~~~l~ 41 (45)
T 2cpg_A 6 TITLSESVLENLEKMAREMGLSKSAMISVA----LENYKK 41 (45)
T ss_dssp EEEEEHHHHHHHHHHHHHHTCCHHHHHHHH----HHHHHH
T ss_pred EEecCHHHHHHHHHHHHHHCcCHHHHHHHH----HHHHHH
Confidence 344566678899999999999998887655 455554
No 37
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=28.72 E-value=24 Score=32.04 Aligned_cols=24 Identities=25% Similarity=0.264 Sum_probs=21.5
Q ss_pred EEEEEeccccccccchHHHHHHHh
Q 039244 168 VGIFRIHHSLGDGTSLMSLLLACT 191 (518)
Q Consensus 168 ~lv~r~HH~l~DG~s~~~l~~~l~ 191 (518)
-|.+.+||.+.||.-+..++..+-
T Consensus 190 ~lsls~DHRvvDG~~aa~Fl~~lk 213 (217)
T 2i9d_A 190 PIAMTIHHGFIDGHHLSLFYKKVE 213 (217)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHH
T ss_pred EEEEEecchhhChHHHHHHHHHHH
Confidence 588999999999999999988764
No 38
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=27.79 E-value=25 Score=31.90 Aligned_cols=25 Identities=20% Similarity=0.299 Sum_probs=22.2
Q ss_pred EEEEEeccccccccchHHHHHHHhc
Q 039244 168 VGIFRIHHSLGDGTSLMSLLLACTR 192 (518)
Q Consensus 168 ~lv~r~HH~l~DG~s~~~l~~~l~~ 192 (518)
-|.+.+||.+.||.-+..++..+-+
T Consensus 186 ~lsls~DHRvvDG~~aa~Fl~~lk~ 210 (219)
T 1q23_A 186 PLAIQVHHAVCDGFHVGRMLNELQQ 210 (219)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEEchhhChHHHHHHHHHHHH
Confidence 6889999999999999999887754
No 39
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=25.45 E-value=24 Score=32.35 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=24.0
Q ss_pred EEEEEeccccccccchHHHHHHHhcccCCC
Q 039244 168 VGIFRIHHSLGDGTSLMSLLLACTRQINDP 197 (518)
Q Consensus 168 ~lv~r~HH~l~DG~s~~~l~~~l~~~~~~p 197 (518)
-+.+.+||-+.||.-+..|+..+-+...+|
T Consensus 197 ~lsls~DHRviDGa~aa~Fl~~lk~~le~p 226 (233)
T 1scz_A 197 YLALSYDHRLIDGRESVGFLVTIKELLEDP 226 (233)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHHCT
T ss_pred EEEEEEcceeechHHHHHHHHHHHHHHhCH
Confidence 488899999999999999988876543333
No 40
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=23.64 E-value=22 Score=32.78 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=23.2
Q ss_pred eEEEEEeccccccccchHHHHHHHhcc
Q 039244 167 AVGIFRIHHSLGDGTSLMSLLLACTRQ 193 (518)
Q Consensus 167 ~~lv~r~HH~l~DG~s~~~l~~~l~~~ 193 (518)
--+.+.+||-+.||.-+..|+..+-+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~ 230 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKY 230 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHH
Confidence 358999999999999999998877653
No 41
>2ay0_A Bifunctional PUTA protein; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.43.1.11
Probab=23.47 E-value=1.2e+02 Score=20.88 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=27.0
Q ss_pred EEEeeechHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 039244 272 IVHRTVSLDDIKLVKNAMNATINDVALGMTQAGLSRYLSR 311 (518)
Q Consensus 272 ~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~r~~~~ 311 (518)
+.......++|.++|++.|.|.+.++--| +..|+.+
T Consensus 8 vrL~~el~~rL~~lA~~~~rs~s~lireA----i~~yl~~ 43 (58)
T 2ay0_A 8 VMLDDATRERIKSAATRIDRTPHWLIKQA----IFSYLEQ 43 (58)
T ss_dssp EEECHHHHHHHHHHHHHTTCCHHHHHHHH----HHHHHHH
T ss_pred eECCHHHHHHHHHHHHHHCcCHHHHHHHH----HHHHHHH
Confidence 33455566899999999999999996554 5666654
No 42
>2kel_A SVTR protein, uncharacterized protein 56B; homodimer, ribbon-helix-helix, transcription repres; NMR {Sulfolobus islandicus rod-shaped virus}
Probab=23.35 E-value=1.4e+02 Score=20.51 Aligned_cols=34 Identities=12% Similarity=-0.020 Sum_probs=24.7
Q ss_pred EEEeeechHHHHHHHHHcCCchhHHHHHHHHHHH
Q 039244 272 IVHRTVSLDDIKLVKNAMNATINDVALGMTQAGL 305 (518)
Q Consensus 272 ~~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL 305 (518)
+...+-.-.+++.+|...|.|+|+++--|+...|
T Consensus 18 vrId~eLH~rlk~~Aa~~g~Sln~~i~eAL~~yl 51 (56)
T 2kel_A 18 IYMDKDLKTRLKVYCAKNNLQLTQAIEEAIKEYL 51 (56)
T ss_dssp EEEEHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3344444578889999999999999877654433
No 43
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=22.66 E-value=25 Score=32.44 Aligned_cols=26 Identities=4% Similarity=-0.110 Sum_probs=22.7
Q ss_pred EEEEEeccccccccchHHHHHHHhcc
Q 039244 168 VGIFRIHHSLGDGTSLMSLLLACTRQ 193 (518)
Q Consensus 168 ~lv~r~HH~l~DG~s~~~l~~~l~~~ 193 (518)
-+.+.+||-+.||.-+..|+..+-+.
T Consensus 209 ~lsls~DHRviDGa~aa~Fl~~lk~~ 234 (243)
T 1dpb_A 209 PLSLSYDCRVINGAAAARFTKRLGDL 234 (243)
T ss_dssp EEEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEECcccccHHHHHHHHHHHHHH
Confidence 58899999999999999998887653
No 44
>2bsq_E FITA, trafficking protein A; transcription, transcription regulation complex, PIN domain, ribbon-helix-helix, DNA binding; HET: 5IU; 3.0A {Neisseria gonorrhoeae} SCOP: a.43.1.8 PDB: 2h1o_E*
Probab=21.83 E-value=99 Score=22.89 Aligned_cols=28 Identities=11% Similarity=-0.033 Sum_probs=24.5
Q ss_pred hHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 039244 279 LDDIKLVKNAMNATINDVALGMTQAGLS 306 (518)
Q Consensus 279 l~~lk~ia~~~g~TvNdvllAa~a~aL~ 306 (518)
...+|..|+++|-|+|+.+..++..++.
T Consensus 13 ~~~Lk~rAa~~GrSle~e~r~iL~~a~~ 40 (77)
T 2bsq_E 13 HNAIKFRARAAGRSTEAEIRLILDNIAK 40 (77)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHc
Confidence 4688889999999999999999888775
No 45
>1u9p_A PARC; unknown function; 1.90A {Escherichia coli} SCOP: a.43.1.1
Probab=21.68 E-value=92 Score=25.20 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=26.9
Q ss_pred EEeeechHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 039244 273 VHRTVSLDDIKLVKNAMNATINDVALGMTQAGLS 306 (518)
Q Consensus 273 ~~~~~~l~~lk~ia~~~g~TvNdvllAa~a~aL~ 306 (518)
.++.-.-+.++..|++.|.|+|.-+..++..++.
T Consensus 24 RLP~eLh~~La~~Ak~eGrSLN~eIv~~Le~sl~ 57 (120)
T 1u9p_A 24 RWPREVLDLVRKVAEENGRSVNSEIYQRVMESFK 57 (120)
T ss_dssp ECCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 3455556889999999999999999998776543
No 46
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=21.08 E-value=31 Score=32.25 Aligned_cols=26 Identities=12% Similarity=0.083 Sum_probs=22.6
Q ss_pred EEEEEeccccccccchHHHHHHHhcc
Q 039244 168 VGIFRIHHSLGDGTSLMSLLLACTRQ 193 (518)
Q Consensus 168 ~lv~r~HH~l~DG~s~~~l~~~l~~~ 193 (518)
-+.+.+||-+.||.-+..|+..+-+.
T Consensus 225 ~lsls~DHRviDGa~aa~Fl~~lk~~ 250 (262)
T 2ii3_A 225 NVSWSADHRIIDGATVSRFSNLWKSY 250 (262)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEECcceecHHHHHHHHHHHHHH
Confidence 58899999999999999998887653
No 47
>3f42_A Protein HP0035; helicobacter pylori unknown-function, structural genomics, P protein structure initiative; HET: MSE; 1.78A {Helicobacter pylori}
Probab=20.45 E-value=1.5e+02 Score=23.05 Aligned_cols=38 Identities=13% Similarity=0.013 Sum_probs=27.7
Q ss_pred CCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 039244 472 VNKMTTVLSVDEGTIPNPHQLCEDIAESLKLIKDAVVA 509 (518)
Q Consensus 472 ~g~l~i~i~~d~~~~~d~~~l~~~~~~~l~~l~~~a~~ 509 (518)
+..-..+|..|++++.|.+.|.+.+..++.+-...+.+
T Consensus 46 G~~ev~~i~Idp~~~eD~E~LeDLI~aA~ndA~~k~~~ 83 (99)
T 3f42_A 46 GLGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKAVEE 83 (99)
T ss_dssp TTSCEEEEEECGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEEECHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 33344567778877788999999888888877665543
Done!