BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039247
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/379 (66%), Positives = 286/379 (75%), Gaps = 34/379 (8%)
Query: 1 MSWIHHQMKQKDDLYTYPPPLSPSSFHRESTSPSSSSSGTRISPAVLFIIVILAVLFFIS 60
MSW+ ++QKD + YPPP + SSG RISPAVLF+IVILAVLFFIS
Sbjct: 1 MSWVRFTIEQKDGNFAYPPPFYKDPILSPPSP-PPPSSGNRISPAVLFVIVILAVLFFIS 59
Query: 61 GLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQLQQLFHLHDSGLDQAFIDAL 120
GLLHLLVRFL+KHPS++AS S+SN R+P EIS SDALQRQLQQLFHL+DSGLDQAFIDAL
Sbjct: 60 GLLHLLVRFLIKHPSATAS-SRSN-RFP-EISTSDALQRQLQQLFHLNDSGLDQAFIDAL 116
Query: 121 PVFQYKEIVGL----------KEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLL 170
PVF YKEIVG +EPFDCAVCLCEFSEKDKLRLLPMCSHAFH+NCIDTWL
Sbjct: 117 PVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQ 176
Query: 171 SNSTCPLCRDTLFTPGFSIENPMFDFDDFREEDGGHVCGENGLTASQKTAEIEEIVVDKG 230
SNSTCPLCR TLF+PGFS+ENPMFDFDD RE++ G ENG SQKT EI+EIVV+KG
Sbjct: 177 SNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEG--VTENG---SQKTMEIQEIVVEKG 231
Query: 231 VLPVRLGKFRRLND-----GLAVEAGGETSSSNLDARRCYSMGSYQYVLGNSDLRVSLCT 285
VLPVRLGKF+RL++ G V AGGETSSSNLDARRC+SMGSYQY+LGNS+L+V
Sbjct: 232 VLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSELKVPFAN 291
Query: 286 DRCGRDTKLSKGTENNRNSPVDGDVEAKKISNMAKGESFSVSKIWLWSKKGKFSSSSDAQ 345
DR R K +E NS + + KKI+ +AKGESFSVSKIWLW KK KF SSDAQ
Sbjct: 292 DRLPRLKPQDKESEQTGNSSSEDN---KKINTVAKGESFSVSKIWLWPKKDKF--SSDAQ 346
Query: 346 MGMP-PSLKMD----LPWL 359
+P SL +D LPW+
Sbjct: 347 RRLPSSSLNVDDLPKLPWM 365
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 308 bits (788), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 239/355 (67%), Gaps = 30/355 (8%)
Query: 4 IHHQMKQKDDLYTYPPPLSPSSF---HRESTSPSSSSSG--TRISPAVLFIIVILAVLFF 58
IH+ + D+L P +PS H+ + S SSSSSG RISP +LFIIV+L+V+FF
Sbjct: 6 IHYSQLKNDNLNQISPSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFF 65
Query: 59 ISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQLQQLFHLHDSGLDQAFID 118
I +LHLLVR+ +K S+ S+S + + E S SD QRQLQQLFHLHDSGLDQA ID
Sbjct: 66 ICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALID 125
Query: 119 ALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLC 178
ALPVF YKEI G KEPFDCAVCLCEFSE DKLRLLP CSHAFHI+CIDTWLLSNSTCPLC
Sbjct: 126 ALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLC 185
Query: 179 RDTLFTPGFSIENPMFDFDDFREEDGGHVCGENGLTASQKTAEIEEIVVDKGVLPVRLGK 238
R TLF+ G E P F+F F +DGG ++ QK AE E + K V VRLGK
Sbjct: 186 RGTLFSLGHQFEYPDFNFGFFAGDDGGGGV---RVSPVQKPAENE---IGKRVFSVRLGK 239
Query: 239 FRRLN----DGLAVEAGGETSSSNLDARRCYSMGSYQYVLGNSDLRVSLCTDRCGRDTKL 294
FR N + V GGETSSS+LD RRC+SMGSYQY++ SDL V+LC +
Sbjct: 240 FRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPN-------- 291
Query: 295 SKGTENNRNSPVDGDVEAKKISNMAKGESFSVSKIWLWS-KKGKFSSSSDAQMGM 348
++G +NN+ DVE KKI+ +KGESFSVSKIW WS K+ KF ++ ++ +
Sbjct: 292 NEGLKNNK------DVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNNHPSETNL 340
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 194 bits (493), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 203/347 (58%), Gaps = 51/347 (14%)
Query: 31 TSPSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTE 90
++ S S+ ++I+P +L II+IL+++FFISGLLH+LV+FL+ + +S Y
Sbjct: 28 SNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLL------TPSRESREDYFDN 81
Query: 91 ISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLK-EPFDCAVCLCEFSEKDK 149
++ ALQ QLQQLF+LHDSG+DQ+ ID LPVF YK IVGLK PFDC VCLCEF +DK
Sbjct: 82 VT---ALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDK 138
Query: 150 LRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTLFTPGFSIEN------------------ 191
LRLLP CSHAFH+ CIDTWLLS+STCPLCR L + GFS +
Sbjct: 139 LRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS-GFSSHHNLSSSYLLVLESEQSSRD 197
Query: 192 --PMFDFDDFREEDGGHVCGENGLTASQKTAEIEEIV--VDKGVLP--VRLGKFRRLNDG 245
P+ + + D + + + +K+ + + + +D+ V+P V+LGKFR ++
Sbjct: 198 MVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEVKLGKFRNID-- 255
Query: 246 LAVEAGGET-------SSSNLDARRCYSMGSYQYVLGN-SDLRVSLCTDR-CGRDTKLSK 296
V G + +S N+D RRC SMGSY+Y++ + L+V + T + G+D S
Sbjct: 256 -HVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLSGKDRVPSH 314
Query: 297 GTENNRNSPVDGDVEAKKIS-NMAKGESFSVSKIWLWSKKGKFSSSS 342
T S D K I ++ + ESFS+SKIWL KK K +S
Sbjct: 315 RT---VMSECGFDPTVKGIEKSVVERESFSLSKIWLRGKKEKQKGTS 358
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 165/299 (55%), Gaps = 55/299 (18%)
Query: 96 ALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKE-PFDCAVCLCEFSEKDKLRLLP 154
ALQ QLQQLFHLHDSG+DQ+FID LPVF YK I+GLK PFDCAVCLCEF +DKLRLLP
Sbjct: 92 ALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLP 151
Query: 155 MCSHAFHINCIDTWLLSNSTCPLCRDTLFTPGFSIENPMFDF--------DDFREEDGGH 206
CSHAFH++CIDTWLLS+STCPLCR +L + S ++P F D E GG
Sbjct: 152 KCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGD 211
Query: 207 ---------------------VCGENGLTASQKTAEIEEIVVD-------KGVLP--VRL 236
+ G N L +++ + + +D V+P V+L
Sbjct: 212 RDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKL 271
Query: 237 GKFRRLNDGLAV-EAGGETSSSNLDARRCYSMGSYQYVLG-NSDLRVSLCTDRC------ 288
GKFR ++ G +SS+LD RRC+SMGSY+Y++ + L+V + T +
Sbjct: 272 GKFRNIDIGEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRG 331
Query: 289 --GRDTKLSK-GTENNRNSPVDGD-----VEAKKISNMAKGESFSVSKIWLWSKKGKFS 339
G T +S+ G + G VE N+ + ESFSVSKIWL KK K S
Sbjct: 332 LPGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVERESFSVSKIWLRGKKEKHS 390
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 168 bits (425), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 145/268 (54%), Gaps = 33/268 (12%)
Query: 29 ESTSPSSSSSGT------------RISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSS 76
E+ SP SSS+ T I + +I LA++ G+L+L+ +FL K SS
Sbjct: 91 EALSPKSSSAATLTLMNQKDPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFLRK--SS 148
Query: 77 SASNSQSNARYPTEISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEI-VGLKEPF 135
+ P S S QLQ LF LHDSGLDQ IDALPVF Y + + L++PF
Sbjct: 149 TLFPIPHFNYNPDLFSFSSP---QLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPF 205
Query: 136 DCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTLFTPGFSIENPMFD 195
DCAVCL EFS+ DKLRLLP+CSHAFH++CIDTWLLSNSTCPLCR +L T +
Sbjct: 206 DCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHS--- 262
Query: 196 FDDFREEDGGHVCGENGLTASQKTAEIEEIVVDKGVLPVRLGKFRRLNDGLAVEAGGETS 255
+ GH ++G + + K V VRLG+F+ N+ + +
Sbjct: 263 -ETLVAPLSGHQQVDDGKAS-----------LAKRVFSVRLGRFKSTNESQSQRHDVKDE 310
Query: 256 SSNLDARRCYSMGSYQYVLGNSDLRVSL 283
RRCYSMG+ QY++ + D V+L
Sbjct: 311 IGVRMPRRCYSMGTQQYLVCDQDFVVAL 338
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 101/140 (72%), Gaps = 7/140 (5%)
Query: 42 ISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQL 101
ISP VL I +L+++FF++ L+HLLV+FL + P + ++ Y S ALQ +
Sbjct: 32 ISPIVLLYITLLSIIFFVAALIHLLVKFLHR-PQTRLDDA-----YDGITESSTALQGRY 85
Query: 102 QQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPF-DCAVCLCEFSEKDKLRLLPMCSHAF 160
Q F+LHD+ +DQ+FIDALP+ YK ++GL+ DCAVCL EF+ +D+LRLLP CSHAF
Sbjct: 86 QTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAF 145
Query: 161 HINCIDTWLLSNSTCPLCRD 180
H+ CIDTWLL+NSTCPLCRD
Sbjct: 146 HVECIDTWLLTNSTCPLCRD 165
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 21/158 (13%)
Query: 29 ESTSPSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYP 88
+S SPS T +P+ + +L LFF++GLL + +R + SN S+ RY
Sbjct: 29 QSFSPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCAR------SNPDSSTRYF 82
Query: 89 TEISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEI----VGLKEPFDCAVCLCEF 144
+ + +R GLD A +++ PVF Y + +G K+ +CA+CL E
Sbjct: 83 RNRANDGSSRR----------GGLDNAVVESFPVFAYSSVKESKIGSKD-LECAICLNEL 131
Query: 145 SEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTL 182
+ + +RLLP+C+H FHI+CIDTWL S++TCP+CR L
Sbjct: 132 EDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 49 IIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQLQQLFHLH 108
+I I+ + FIS L ++ FL K Y E+ + Q++FH
Sbjct: 51 VIAIIVLAIFIS--LSMVACFLHK------------TFYRAEVEAAS------QEVFHSR 90
Query: 109 -DSGLDQAFIDALPVFQYKEIVGLK---EPFDCAVCLCEFSEKDKLRLLPMCSHAFHINC 164
GL++ +++ P+F Y E+ GLK +CA+CL EF +K+ LR +P CSH FH NC
Sbjct: 91 ARRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANC 150
Query: 165 IDTWLLSNSTCPLCRDTL-FTPGFSIENPMFDFDDFREEDGGHVCGENGLTASQKTAEIE 223
ID WL S STCP CR L PG S P+ D + E+ H + G + T ++
Sbjct: 151 IDVWLSSQSTCPACRANLSLKPGESYPYPITDLETGNEQRDEHSLLQLGTNLDRFTLQLP 210
Query: 224 E 224
E
Sbjct: 211 E 211
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 32/207 (15%)
Query: 45 AVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQ---- 100
A+ I + AVL + L+ +F S + N + Y ++ +D + +
Sbjct: 82 AISIITITGAVLAILLTGFFLVAKFF-----SDSVNRVNQGTYQSDNEDNDTVMEEEFQD 136
Query: 101 LQQLFH----LHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMC 156
+Q+ H + +GL Q+ I+++ + YK GL E DC VCL EF E + LRLLP C
Sbjct: 137 REQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKC 196
Query: 157 SHAFHINCIDTWLLSNSTCPLCRDTL---------------FTPGFSIENPMFDFDDFRE 201
+HAFHI+CIDTWL S++ CPLCR + TPG S + D E
Sbjct: 197 NHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGS--GSHLENDGVDE 254
Query: 202 EDGGHVCGENGLTASQKTAEIEEIVVD 228
ED G + EN + + K ++ +I ++
Sbjct: 255 EDHGEI--ENRVDSDFKESDDSDIRIE 279
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 10/150 (6%)
Query: 44 PAVLFIIVILAVLFFISGLLHLLVRFL--VKHPSSSASNSQSNARYPTEIS-------GS 94
P ++ +I ILA F + L+ ++ +H SSS S + N R ++ + +
Sbjct: 58 PLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAIN-RISSDYTWQGTNNNNN 116
Query: 95 DALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 154
+ Q + GLD++ I ++ V++Y+++ G E DC+VCL EF E + LRLLP
Sbjct: 117 NGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLP 176
Query: 155 MCSHAFHINCIDTWLLSNSTCPLCRDTLFT 184
C+HAFH+ CIDTWL S+S CPLCR + T
Sbjct: 177 KCNHAFHVPCIDTWLKSHSNCPLCRAFIVT 206
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 17/158 (10%)
Query: 36 SSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSD 95
S +R P + ++++L +FF G + +R ++ + P +
Sbjct: 53 SGDSSRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGN------PNDAGNWL 106
Query: 96 ALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGL---KEPFDCAVCLCEFSEKDKLRL 152
A RQ + GLD + I+ P FQY + L KE +C+VCL EF + + LRL
Sbjct: 107 ATNRQQAR-------GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRL 159
Query: 153 LPMCSHAFHINCIDTWLLSNSTCPLCR-DTLFTPGFSI 189
+P C H FH CID WL S++TCPLCR D + PG SI
Sbjct: 160 IPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESI 197
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 74/158 (46%), Gaps = 27/158 (17%)
Query: 40 TRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHP----SSSASNSQSNARYPTEISGSD 95
T SP I+++L +FF G + + +R ++H S + N R TE
Sbjct: 33 TSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTE----- 87
Query: 96 ALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGL---KEPFDCAVCLCEFSEKDKLRL 152
GLD + I+ P F Y + L KE +C VCL EF + + LRL
Sbjct: 88 --------------PGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRL 133
Query: 153 LPMCSHAFHINCIDTWLLSNSTCPLCRDTLF-TPGFSI 189
+P C H FH CID WL S +TCPLCR L PG S+
Sbjct: 134 IPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESV 171
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 47 LFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQLQQLFH 106
+ +I IL + L+ ++ +H +S+S + N + E S Q
Sbjct: 59 IALIGILTSALILVSYYTLISKYCHRHHQTSSSETL-NLNHNGEGFFSST------QRIS 111
Query: 107 LHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCID 166
+ GL+++ I ++ V++YK G + DC+VCL EF E + LRLLP C+HAFH+ CID
Sbjct: 112 TNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCID 171
Query: 167 TWLLSNSTCPLCRDTLFTPGFSIENPMFDFDDFREEDGGHVCGENGLTASQKTAEIEEIV 226
TWL S+S CPLCR F G + NP V N ++ +T + EI
Sbjct: 172 TWLKSHSNCPLCR--AFVTG--VNNPTASVG-----QNVSVVVANQSNSAHQTGSVSEIN 222
Query: 227 VDKGVLPVRLGKFRRLNDGLAVEAGGETSSSNLDAR 262
++ + G F D + V E S N DAR
Sbjct: 223 LNLAGYESQTGDF----DSVVVIEDLEIGSRNSDAR 254
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 109 DSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTW 168
+SG+D++ I++LPVF++ + G K+ +CAVCL F + LRLLP C HAFH+ C+DTW
Sbjct: 118 NSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTW 177
Query: 169 LLSNSTCPLCR 179
L ++STCPLCR
Sbjct: 178 LDAHSTCPLCR 188
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 110 SGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWL 169
SGLD+ I++LP+F++ + G K+ DC+VCL +F + LRLLP C HAFHI CID WL
Sbjct: 96 SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWL 155
Query: 170 LSNSTCPLCRDTL 182
++TCPLCRD +
Sbjct: 156 EQHATCPLCRDRV 168
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 26/168 (15%)
Query: 18 PPPLSPSSFHRESTSPSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSS 77
PPP P+ ++ P++ I + +++F ++ +L + +
Sbjct: 25 PPP------------PNLYATSDLFKPSLAIITGVFSIVFTLTFVLLVYAKCF------- 65
Query: 78 ASNSQSNARYPTEISGSDALQRQL-QQLFHLHD--SGLDQAFIDALPVFQYKEIVGLKEP 134
++ R T+ G +L Q LF+ SGLD+ I++LP F++ + GLK+
Sbjct: 66 ----HNDLRSETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQG 121
Query: 135 FDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTL 182
+C+VCL +F + + LRLLP C HAFHI CID WL ++TCPLCR+ +
Sbjct: 122 LECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRV 169
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 92/187 (49%), Gaps = 40/187 (21%)
Query: 28 RESTSPSSSSSGTRISPAVLFIIVILAV---LFFISGLLHLLVRFLVKHPSSSASNSQSN 84
++ + P++S T +S + IV+LA+ L +S LH +
Sbjct: 32 QQESVPTNSIRQTNLSADSIIAIVVLAIFISLGMVSCCLHCIF----------------- 74
Query: 85 ARYPTEI--SGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLK---EPFDCAV 139
Y EI +G D L + ++ GL++ I++ P F Y E+ GLK +CA+
Sbjct: 75 --YREEIGAAGQDVLHSRARR-------GLEKEVIESFPTFLYSEVKGLKIGKGGVECAI 125
Query: 140 CLCEFSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTL-FTPGFSIENPMFDFDD 198
CL EF +++ LR +P CSH FH NCID WL S STCP+CR L PG S P + D
Sbjct: 126 CLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESY--PYLNMDV 183
Query: 199 FREEDGG 205
E GG
Sbjct: 184 ---ETGG 187
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 44 PAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQLQQ 103
P V+ I V+ V+FF +V + S+A S+S+ T+ +DA + Q+ +
Sbjct: 50 PVVVVITVLFLVIFF-------MVFGSIFCRRSNAQFSRSSIFRSTD---ADA-ESQVVR 98
Query: 104 LFHLHDSGLDQAFIDALPVFQYKEIVGL---KEPFDCAVCLCEFSEKDKLRLLPMCSHAF 160
+ L GLD I+ P F Y E+ + K +CAVCLCEF + + LRL+P C H F
Sbjct: 99 IRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVF 158
Query: 161 HINCIDTWLLSNSTCPLCRDTLFTPGFSIENPMFDFDDFREEDGG 205
H +C+D WL +STCPLCR L + N D DD E G
Sbjct: 159 HADCVDVWLSEHSTCPLCRADL------VLNQQGDDDDSTESYSG 197
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 18 PPPLSPSSFHRESTSPSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSS 77
PPP+S F + + S +SP V+ I I A F ++ L+ ++ ++
Sbjct: 39 PPPISYEQFLNDGVA-----SNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNE 93
Query: 78 ASNSQSNARYPTEISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIV-GLK-EPF 135
A++ + +++ + + +GLD I + F+ K+ G K
Sbjct: 94 AASESGRSDIILDVNSPERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGT 153
Query: 136 DCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTLFTP 185
DC++CL EF+E + LRLLP C+H FH+ CID WL S+S CPLCR + P
Sbjct: 154 DCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVP 203
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 37 SSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPS------SSASNSQSNARYPTE 90
SSG SP V+ II +LA F + + ++ S S+S +
Sbjct: 50 SSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGS 109
Query: 91 ISGSDALQRQLQQLFHLHD-SGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDK 149
Q + + +++ SGLD+ I+ + V +Y+ G DC+VCL EFS+ +
Sbjct: 110 GGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGES 169
Query: 150 LRLLPMCSHAFHINCIDTWLLSNSTCPLCRD--TLFTPGFSIENP 192
LRLLP CSHAFH CIDTWL S+S CPLCR T T G + P
Sbjct: 170 LRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASPEP 214
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 29 ESTSPSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYP 88
+T+P + PAV+ +++ +LF + + ++ P ++S+++
Sbjct: 31 RTTAPPYIAQRPNQVPAVIIAMLMFTLLFSMLACC-VCYKYTNTSPHGTSSDTEEGGH-- 87
Query: 89 TEISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLK---EPFDCAVCLCEFS 145
G A R+ + GL + I++ P F Y ++ GLK +CA+CL EF
Sbjct: 88 ----GEVAFTRRTSR-------GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFE 136
Query: 146 EKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTLFTPGFSIENPMFDFDDFREEDGG 205
+++ LRL+P CSHAFH +CID WL S STCP+CR +L S +N ++ F R D
Sbjct: 137 DEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPF--IRPHDNQ 194
Query: 206 HVCGENGLTASQKTAEIEEI 225
+ EN +TA + E ++
Sbjct: 195 DMDLEN-VTARRSVLESPDV 213
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 80/158 (50%), Gaps = 26/158 (16%)
Query: 39 GTRISPAVLFIIVILAVLF--FISGLLHLLVRFLVKHPSSSASN---SQSNARYPTEISG 93
GT I + L ++VI +LF FI GL + R+ + S S + S+ T I+
Sbjct: 5 GTEIKASDLTLLVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITA 64
Query: 94 SDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEI----VGLKEPFDCAVCLCEFSEKDK 149
GLD+A I++ P F Y E+ +G+ +CAVC+CEF + +
Sbjct: 65 V---------------RGLDEAIINSFPTFLYSEVKERRIGIG-GVECAVCICEFEDHET 108
Query: 150 LRLLPMCSHAFHINCIDTWLLSNSTCPLCR-DTLFTPG 186
LRL+P C H FH +C+ WL +STCPLCR D PG
Sbjct: 109 LRLMPECCHVFHADCVSVWLSDHSTCPLCRVDLCLQPG 146
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 108 HDSGLDQAFIDALPVFQY--KEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCI 165
D LDQA +D +P+F Y K +E +C+VCL EF E+D+ RLLP C H+FH++CI
Sbjct: 77 RDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCI 136
Query: 166 DTWLLSNSTCPLCRDTLFTPGFSIENPMFDFDDFREEDGGHVCGENGLTASQKTAEIEEI 225
DTW S STCPLCR + P F+ + G + LT + E E I
Sbjct: 137 DTWFRSRSTCPLCRAPVQPP-------------FQVIETGSSSSSSPLTFPTEGCEREPI 183
Query: 226 VVDKGVLPV-RLGKFRRLNDGLAVEAGGETSSSN-LDARRCYSM 267
+ ++ + R +F N GL +E G + S L +R +S+
Sbjct: 184 DLAGIIVDISREVEFEGSNPGLPIENGSKFPGSRVLSLKRLWSI 227
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 90 EISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLK---EPFDCAVCLCEFSE 146
E G + L ++++ G+D+ I++ P F Y E+ K +CA+CLCEF +
Sbjct: 77 ETGGHEVLHSRVRR-------GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFED 129
Query: 147 KDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTL-FTPGFSIENPMFDFDDFREEDG 204
++ LR +P CSH FH NCID WL S STCP+CR L G S +P D + + G
Sbjct: 130 EEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSLKSGDSFPHPSMDVETGNAQRG 188
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 36/171 (21%)
Query: 115 AFIDALPVFQYKEIVGLKEPF---DCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLLS 171
+ +D+LP+F++ + DCAVCL +F +D+LRLLP+C HAFH +CID WL+S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 172 NSTCPLCRDTLFTPGFSIENPMFDFDDFREEDGGHVCGENGLTASQKTAEIEEIVVDKGV 231
N TCPLCR LF S + M +GG GEN
Sbjct: 152 NQTCPLCRSPLFA---SESDLMKSLAVVGSNNGG---GENSFR----------------- 188
Query: 232 LPVRLGKFRRLNDGLAVEAGGETSSSNLDARRCYSMGSYQYVLGNSDLRVS 282
+ +G R E+ ++ R YS+GS+ Y++ + D +S
Sbjct: 189 --LEIGSISRRRQTPIPES--------VEQHRTYSIGSFDYIVDDVDSEIS 229
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 33 PSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVK--HPSSSASNSQSNARYPTE 90
P +SSSGT + +I ILA F + +++ + +S+ + P
Sbjct: 32 PRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLM 91
Query: 91 ISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKE---IVGL----KEPFDCAVCLCE 143
I + R GLD++ I A+PVF++K+ + G K +C+VCL E
Sbjct: 92 IYSPHEVNR-----------GLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNE 140
Query: 144 FSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTL 182
F E +KLR++P C H FHI+CID WL N+ CPLCR ++
Sbjct: 141 FQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 20/146 (13%)
Query: 41 RISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQ 100
R+SPA+ I+VIL F G + R P + S + AR ++ +
Sbjct: 44 RLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPA-GGARSRATVNAAA----- 97
Query: 101 LQQLFHLHDSGLDQAFIDALPVFQYKEI----VGLKEPFDCAVCLCEFSEKDKLRLLPMC 156
GLD + ++ P F Y ++ +G E +CA+CL EF + + LRLLP C
Sbjct: 98 ---------RGLDVSVVETFPTFLYSDVKTQKLGKGE-LECAICLNEFEDDETLRLLPKC 147
Query: 157 SHAFHINCIDTWLLSNSTCPLCRDTL 182
H FH +CID WL ++ TCP+CR L
Sbjct: 148 DHVFHPHCIDAWLEAHVTCPVCRANL 173
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 52/69 (75%)
Query: 111 GLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLL 170
GL ++ I+++ V +K+ G+ + +C+VCL EF E + LRLLP CSHAFH+NCIDTWLL
Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLL 168
Query: 171 SNSTCPLCR 179
S+ CPLCR
Sbjct: 169 SHKNCPLCR 177
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 42/185 (22%)
Query: 26 FHRESTSPSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVK-HPSS-----SAS 79
FHR +SS+GT + +I ILA F + +++ + H S S
Sbjct: 24 FHR------ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLS 77
Query: 80 NSQSNARYPTEISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKE------------ 127
+ N + P + + L GLD++ I A+P+F++K+
Sbjct: 78 RRRRNDQDPLMVYSPE-----------LRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGE 126
Query: 128 --IVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCR-----D 180
K +C+VCL EF +++KLR++P CSH FHI+CID WL +N+ CPLCR D
Sbjct: 127 GEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCD 186
Query: 181 TLFTP 185
T F P
Sbjct: 187 TSFPP 191
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 46 VLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQLQQLF 105
+LF +VIL V LHL R+ + +S R T + + +
Sbjct: 37 ILFFVVILMVF------LHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSV- 89
Query: 106 HLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCI 165
+ GLD I +LPVF + + K+P +CAVCL EF E + R+LP C H FH++CI
Sbjct: 90 -VASRGLDPNVIKSLPVFTFSDETH-KDPIECAVCLSEFEESETGRVLPNCQHTFHVDCI 147
Query: 166 DTWLLSNSTCPLCR 179
D W S+STCPLCR
Sbjct: 148 DMWFHSHSTCPLCR 161
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 107 LHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCID 166
LH++GLD + ++ V +K K+ +CAVCL + + DK R+LP C+H FH++CID
Sbjct: 91 LHNAGLDSKILQSIHVVVFK-CTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCID 149
Query: 167 TWLLSNSTCPLCRDTL 182
W S+STCPLCR+T+
Sbjct: 150 MWFQSHSTCPLCRNTV 165
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 36 SSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSD 95
S++ +P + ++V L F + + +L+ N + AR P +
Sbjct: 37 SATAGGFTPTTVVVLVALITAFVLLTVFSVLI------------NRCAQARAPPRRAFRS 84
Query: 96 ALQRQ---LQQLFHLHDSGLDQAFIDALPVFQYKEI----VGLKEPFDCAVCLCEFSEKD 148
Q GLD+ ++A P Y ++ P +CAVCL EF++ D
Sbjct: 85 TASHQPVGGAAAASRASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSD 144
Query: 149 KLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTLFTPGFSI 189
+LR+LP C H FH +CID WL + TCPLCR L P S+
Sbjct: 145 ELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTAPPVSL 185
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 44 PAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQLQQ 103
P V+ + VIL V+FFI G + H + A N + P + +Q Q +
Sbjct: 24 PLVIILTVILLVVFFI-GFFAIYFCKCFYHTLTEAWNHHYHNGLP-----ENQIQAQQEP 77
Query: 104 LFHLHDSGLDQAFIDALPVFQYKEIVGLKEP---FDCAVCLCEFSEKDKL-RLLPMCSHA 159
+ + GL+ I + P+F + + L+E +CA+CL EF E+ L RLL C H
Sbjct: 78 VQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHV 137
Query: 160 FHINCIDTWLLSNSTCPLCRDTL 182
FH CID WL SN TCP+CR L
Sbjct: 138 FHQECIDQWLESNKTCPVCRRNL 160
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 101 LQQLFHLHDS------GLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 154
L Q F L++ GL + ID L Y E LK C+VC+ E++E +KLR LP
Sbjct: 664 LAQFFLLNEDDDDQPRGLTKEQIDNLSTRNYGENDALK---TCSVCITEYTEGNKLRKLP 720
Query: 155 MCSHAFHINCIDTWLLSNSTCPLCRDTLFTPG 186
CSH +HI+CID WL NSTCP+CR + G
Sbjct: 721 -CSHEYHIHCIDRWLSENSTCPICRRAVLVAG 751
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 111 GLDQAFIDALPVFQYKEIVGLKEPF----------DCAVCLCEFSEKDKLRLLPMCSHAF 160
GLD + I LP+F Y +P DCAVCL EF E D +R LP+C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 161 HINCIDTWLLSNSTCPLCRDTLF 183
H+ CID WL S+ CPLCR +
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAIL 202
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 48 FIIVILAVLFFISGLLHLLVRFL------VKHPSSSASNSQSNARYPTEISGSDALQRQL 101
I++ +AVLF + +LHL + ++ Q + I+ +RQ
Sbjct: 29 IIVLFMAVLFVL--ILHLYAKLYWWRIDQLQQQQQQQQQEQEQEEDQSSIAPPVVTRRQR 86
Query: 102 QQLFH------LHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPM 155
++ L ++GL + +LP+ +++ K+ +C++CL E + DK RLLP
Sbjct: 87 RRFIFVPGQDALSNTGLTSFELSSLPIVFFRQD-SCKDGLECSICLSELVKGDKARLLPK 145
Query: 156 CSHAFHINCIDTWLLSNSTCPLCRDTLFTP 185
C+H+FH+ CID W S+STCP+CR+T+ P
Sbjct: 146 CNHSFHVECIDMWFQSHSTCPICRNTVLGP 175
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 111 GLDQAFIDALPVFQYKEIVGLKEPF---DCAVCLCEFSEKDKLRLLPMCSHAFHINCIDT 167
GLD I +LP F +VG+K +CAVCL EKD R+LP C H FH++C+DT
Sbjct: 75 GLDSLVIASLPTF----VVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDT 130
Query: 168 WLLSNSTCPLCR 179
WL + STCP+CR
Sbjct: 131 WLTTQSTCPVCR 142
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 10/92 (10%)
Query: 101 LQQLFHLHDS------GLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 154
L Q F L++ GL + ID L + + E LK C+VC+ E++E +KLR LP
Sbjct: 507 LAQFFLLNEDDEDQPRGLTKEQIDNLAMRSFGENDALK---TCSVCITEYTEGNKLRKLP 563
Query: 155 MCSHAFHINCIDTWLLSNSTCPLCRDTLFTPG 186
CSH +H++CID WL NSTCP+CR + + G
Sbjct: 564 -CSHEYHVHCIDRWLSENSTCPICRRAVLSSG 594
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 43 SPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSAS-----NSQSNARYPTEISGSDAL 97
S L I ++L LFF+ G + R SS+ ++S+ P +S S +
Sbjct: 48 STMALTIFILLVALFFM-GFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVV 106
Query: 98 QRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCS 157
R + GLD + +LPV++Y + + DC +CL +F E + ++++P C
Sbjct: 107 SRP-----YSFRRGLDSQAVRSLPVYRYTKAAKQRNE-DCVICLSDFEEGETVKVIPHCG 160
Query: 158 HAFHINCIDTWLLSNSTCPLCR 179
H FH++C+DTWL S TCPLCR
Sbjct: 161 HVFHVDCVDTWLSSYVTCPLCR 182
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 101 LQQLFHLHDS------GLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 154
L Q F L++ GL + ID L + + E LK C+VC+ E++E +KLR LP
Sbjct: 531 LAQFFLLNEDDDDQPRGLTKEQIDNLAMRSFGENDALK---TCSVCITEYTEGNKLRKLP 587
Query: 155 MCSHAFHINCIDTWLLSNSTCPLCRDTLFTPG 186
CSH +H++CID WL NSTCP+CR + G
Sbjct: 588 -CSHEYHVHCIDRWLSENSTCPICRRAVLASG 618
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 30 STSPSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPT 89
STSP+ +S S VL + V+L L I GL+ + ++ AS ++S+ +P
Sbjct: 14 STSPAEASPPFN-SDLVLILAVLLCALTCIIGLIAVSRCAWLRR---IASRNRSDQTHPP 69
Query: 90 EISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPF-DCAVCLCEFSEKD 148
++ ++ GL + + +LP Y E +CA+CL EF+ D
Sbjct: 70 PVAAAN--------------KGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGD 115
Query: 149 KLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTLFT 184
+LR+LP C H FH++CIDTWL S+S+CP CR L
Sbjct: 116 ELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVV 151
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 101 LQQLFHLHDS------GLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 154
L Q F L++ GL + ID L + E LK C+VC+ E++E +KLR LP
Sbjct: 546 LAQFFLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALK---TCSVCITEYTEGNKLRKLP 602
Query: 155 MCSHAFHINCIDTWLLSNSTCPLCRDTLFTPG 186
CSH +H++CID WL NSTCP+CR + G
Sbjct: 603 -CSHEYHVHCIDRWLSENSTCPICRRAVLVAG 633
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 16/190 (8%)
Query: 29 ESTSPSSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYP 88
E+ +PS+S+ ++ FI + FI L L V +L ++ +++ S R
Sbjct: 13 ETYAPSNSTESEKLKLYQAFIFSVPICFTFIV-LFVLYVIYLRRNSTTNVDWSSLGMRGG 71
Query: 89 TEISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKD 148
T + ++ L + GL + + LPV YKE +K+ C+VCL ++ ++
Sbjct: 72 TFVPTNNNLSTA--------ELGLSKDIREMLPVVIYKESFIVKDS-QCSVCLGDYQAEE 122
Query: 149 KLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTLFTPGFSIENPMFDFDDFREEDGGHVC 208
KL+ +P C H FH+ CID WL S++TCPLCR +L I P D E +
Sbjct: 123 KLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL------IPKPSLDLSHQSTEIVSSIE 176
Query: 209 GENGLTASQK 218
NG AS +
Sbjct: 177 NSNGGEASTQ 186
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 101 LQQLFHLHDS------GLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 154
L Q F L++ GL + ID L + E LK C+VC+ E++E +KLR LP
Sbjct: 529 LAQFFLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALK---TCSVCITEYTEGNKLRKLP 585
Query: 155 MCSHAFHINCIDTWLLSNSTCPLCRDTLF 183
CSH +HI+CID WL NSTCP+CR +
Sbjct: 586 -CSHEYHIHCIDRWLSENSTCPICRRAVL 613
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 109 DSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTW 168
++GLD I + PVF Y +CA+CL EFS++D +RL+ +C H FH NCID W
Sbjct: 75 NTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLW 134
Query: 169 LLSNSTCPLCR 179
+ TCP+CR
Sbjct: 135 FELHKTCPVCR 145
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 43 SPAVLFIIVILAVLFFISGLLHLLVRFLVKHPSSSASNSQSNARYPTEISGSDALQRQLQ 102
S +L + L+ + I LHL RF+++ + R+P
Sbjct: 29 SKIMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGLPVIFRHP-------------- 74
Query: 103 QLFHLHDSGLDQAFIDALPVFQYKEIVGLK-EPFDCAVCLCEFSEKDKLRLLPMCSHAFH 161
F + GL+ I +LP F G+ +CAVCL E+DK R LP C H FH
Sbjct: 75 --FEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFH 132
Query: 162 INCIDTWLLSNSTCPLCR 179
++C+DTWL + STCP+CR
Sbjct: 133 VDCVDTWLTTCSTCPVCR 150
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 111 GLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWLL 170
GL+ + I +LP+F + + L +C+VCL EF + + R++P C H FH++CID W
Sbjct: 51 GLNPSIIKSLPIFTFSAVTALFA-MECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFH 109
Query: 171 SNSTCPLCRDTL--FTPG---------FSIENPMFDFDDFREEDGGHVCGENGLTASQKT 219
S+S+CPLCR + F G SI +P+ + D +G G++ SQ+
Sbjct: 110 SHSSCPLCRSQIEPFAGGVKSSMDEVAISISDPV--YGDTNHHEGTETTGDSVPEDSQRK 167
Query: 220 AEIEEI 225
EI
Sbjct: 168 PAAIEI 173
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 111 GLDQAFIDALPVFQYKEI----VGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCID 166
GLD I+ P F Y E+ +G K +CA+CL EF + + LRLLP C H FH +CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIG-KGALECAICLNEFEDDETLRLLPKCDHVFHPHCIG 153
Query: 167 TWLLSNSTCPLCRDTL 182
WL + TCP+CR L
Sbjct: 154 AWLQGHVTCPVCRTNL 169
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 29 ESTSPSSS---SSGTRISPAVLFIIVILAVLFFISGLLHL-----LVRFLVKHPSSSASN 80
ES +PS + S+ S V+ + +L L + GL+ + L R + + S S
Sbjct: 11 ESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQ 70
Query: 81 SQSNARYPTEISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPF-DCAV 139
+QS Q + GL + + +LP + E F +CA+
Sbjct: 71 TQSP-----------------QPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAI 113
Query: 140 CLCEFSEKDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRDTLFT 184
CL EFS D+LR+LP C H FH+ CIDTWL S+S+CP CR L
Sbjct: 114 CLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVV 158
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%)
Query: 110 SGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHINCIDTWL 169
+GL + + PV +Y +CA+CL EF++ +++R+LP C+H+FH++CIDTWL
Sbjct: 78 AGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWL 137
Query: 170 LSNSTCPLCRDTLF 183
+S+S+CP CR +L
Sbjct: 138 VSHSSCPNCRHSLI 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,819,772
Number of Sequences: 539616
Number of extensions: 5916822
Number of successful extensions: 16941
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 16420
Number of HSP's gapped (non-prelim): 540
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)