BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039250
(571 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 255/547 (46%), Gaps = 60/547 (10%)
Query: 34 RFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHG 92
R Y+++++ CN ++ +N FPGP + A D ++V++TN+ IHWHG
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 93 VRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT-VYGAIVVY 151
+ QR + W DG A I+QC I G+TF Y FT+ GTFF+H H+ R +YG+++V
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 152 PKTGVPYPFQFPYQEHIIILGEYWLQDV----VQLERQVLASGGAPPP------------ 195
P G PF + E ++L ++W Q + V L + + G P
Sbjct: 123 PPQGKKEPFHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181
Query: 196 -SNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEA 254
+ Y N P + Y V P KTY +R+ + FAI NH+L +VEA
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241
Query: 255 DAEYTKPFSTDRVMLGPGQTVNVLVTADQ-PIGKYSMAMGPYMSAQGVSFQNISAIAYFQ 313
D Y +PF T + + G++ +VL+T DQ P Y +++G + +
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVG----TRARHPNTPPGLTLLN 297
Query: 314 YLGAQPNSLAL-----PATLPRFNDNLAVKTVMDGLRSLNPVPVPK-EIDANLFVTIGLN 367
YL PNS++ P P ++D K + + P P + + +F+
Sbjct: 298 YL---PNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLL---- 350
Query: 368 VQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTED-FPEAPLK 426
N + + NG + ++N++S P L A + F ++ PE +
Sbjct: 351 -----------NTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPE 399
Query: 427 FYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVT---TENHPIHLHGYNF 483
YD + P + + G + G V +ILQ+ + +E HP HLHG++F
Sbjct: 400 DYDI-----DTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDF 454
Query: 484 YVVGYGTGNYD-PQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQS 542
+V+GYG G + + ++ NL +PP NT+ + GW AIRF ADNPGVW HCH + H
Sbjct: 455 WVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLH 514
Query: 543 WGLGTVL 549
G+G V
Sbjct: 515 MGMGVVF 521
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 523 FTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGELE 559
FT DNPG +F H H + +S GL LIV +G+ E
Sbjct: 93 FTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKE 129
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 227/513 (44%), Gaps = 83/513 (16%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++ + VN++FP P++ + DR +I +TN + +T IHWHG Q + W DGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
++ QCPI +G F Y+F + Q GTF++H+H+S + G + G IVVY P+ +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDG-LRGPIVVYDPQDPHKSLYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAP-PPSNAYTINGHPGPNYNCSANDVYKIEV 221
+I L +++ + A G+P P ++A ING G + + D+ I V
Sbjct: 140 DDDSTVITLADWY---------HLAAKVGSPVPTADATLINGL-GRSIDTLNADLAVITV 189
Query: 222 VPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTA 281
GK Y RL++ + + F+I H LT++EAD+ KP + D + + Q + ++ A
Sbjct: 190 TKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNA 249
Query: 282 DQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGA---QPNSLALPATLPRFNDNLAVK 338
DQ +G Y + P + +F A +Y GA +P + P+T P L
Sbjct: 250 DQDVGNYWIRALPNSGTR--NFDGGVNSAILRYDGAAPVEPTTSQTPSTNPLVESAL--- 304
Query: 339 TVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFI 398
T ++G + P P +D L + G K ++N SF
Sbjct: 305 TTLEGTAAPG-SPAPGGVDLALNMAFGFAGGKF-------------------TINGASFT 344
Query: 399 KPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTR 458
P V VL L+ A + +P+ + L
Sbjct: 345 PPTVPVL-------------------LQILSGAQSAQDLLPSGS-------VYSLPANAD 378
Query: 459 VQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTI--GVPVG 516
++I L TA HP HLHG+ F VV ++ +N +P Y + + G P G
Sbjct: 379 IEISLPATAAAPGFPHPFHLHGHTFAVV------RSAGSSTYNYENPVYRDVVSTGSP-G 431
Query: 517 GWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
IRF DNPG WF+HCH D H G V+
Sbjct: 432 DNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVM 464
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 149/513 (29%), Positives = 223/513 (43%), Gaps = 83/513 (16%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++ + VN++FP P++ + DR +I +TN + +T IHWHG Q + W DGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
++ QCPI +G F Y+F + Q GTF++H+H+S + G + G IVVY P +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDG-LRGPIVVYDPNDPHASLYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAP-PPSNAYTINGHPGPNYNCSANDVYKIEV 221
+I L +++ + A GAP P ++A ING G + A D+ I V
Sbjct: 140 DDDSTVITLADWY---------HLAAKVGAPVPTADATLINGL-GRSAATLAADLAVITV 189
Query: 222 VPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTA 281
GK Y RL++ + F+I H LT++EAD+ KP + D + + Q + ++ A
Sbjct: 190 TKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNA 249
Query: 282 DQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGA---QPNSLALPATLPRFNDNLAVK 338
DQ + Y + P Q + SAI +Y GA +P + P+T P L
Sbjct: 250 DQDVDNYWIRALPNSGTQNFAGGTNSAI--LRYDGAAPVEPTTSQTPSTNPLVESAL--- 304
Query: 339 TVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFI 398
T + G + P P +D L + G GN ++N SF
Sbjct: 305 TTLKGTAAPG-SPTPGGVDLALNMAFGF-----AGGN--------------FTINGASFT 344
Query: 399 KPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTR 458
P V VL L+ A + +P L
Sbjct: 345 PPTVPVL-------------------LQILSGAQSAADLLP-------AGSVYSLPANAD 378
Query: 459 VQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTI--GVPVG 516
++I L TA HP HLHG+ F VV ++ +N +P Y + + G P G
Sbjct: 379 IEISLPATAAAPGFPHPFHLHGHVFAVV------RSAGSSTYNYANPVYRDVVSTGAP-G 431
Query: 517 GWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
IRF DNPG WF+HCH D H G V+
Sbjct: 432 DNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVM 464
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 149/513 (29%), Positives = 223/513 (43%), Gaps = 83/513 (16%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++ + VN++FP P++ + DR +I +TN + +T IHWHG Q + W DGPA
Sbjct: 21 SRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
++ QCPI +G F Y+F + Q GTF++H+H+S + G + G IVVY P +
Sbjct: 81 FVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDG-LRGPIVVYDPNDPHASLYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAP-PPSNAYTINGHPGPNYNCSANDVYKIEV 221
+I L +++ + A GAP P ++A ING G + A D+ I V
Sbjct: 140 DDDSTVITLADWY---------HLAAKVGAPVPTADATLINGL-GRSAATLAADLAVITV 189
Query: 222 VPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTA 281
GK Y RL++ + F+I H LT++EAD+ KP + D + + Q + ++ A
Sbjct: 190 TKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNA 249
Query: 282 DQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGA---QPNSLALPATLPRFNDNLAVK 338
DQ + Y + P Q + SAI +Y GA +P + P+T P L
Sbjct: 250 DQDVDNYWIRALPNSGTQNFAGGTNSAI--LRYDGAAPVEPTTSQTPSTNPLVESAL--- 304
Query: 339 TVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFI 398
T + G + P P +D L + G GN ++N SF
Sbjct: 305 TTLKGTAAPG-SPTPGGVDLALNMAFGF-----AGGN--------------FTINGASFT 344
Query: 399 KPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTR 458
P V VL L+ A + +P L
Sbjct: 345 PPTVPVL-------------------LQILSGAQSAADLLP-------AGSVYSLPANAD 378
Query: 459 VQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTI--GVPVG 516
++I L TA HP HLHG+ F VV ++ +N +P Y + + G P G
Sbjct: 379 IEISLPATAAAPGFPHPFHLHGHVFAVV------RSAGSSTYNYANPVYRDVVSTGAP-G 431
Query: 517 GWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
IRF DNPG WF+HCH D H G V+
Sbjct: 432 DNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVM 464
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 232/515 (45%), Gaps = 86/515 (16%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYN-ATIHWHGVRQRLSCWFDGPA 105
A++ V VN + P P++ + DR +I ++TN + ++IHWHG Q+ + W DGPA
Sbjct: 21 AREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
++ QCPI SG +F Y+F + Q GTF++H+H+S + G + G VVY P +
Sbjct: 81 FVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDG-LRGPFVVYDPNDPHASLYDI 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVV 222
+ +I L + W +L + P S++ ING G + +D+ I+V
Sbjct: 140 DNDDTVITLAD-WYHVAAKLGPRF------PFGSDSTLINGL-GRTTGIAPSDLAVIKVT 191
Query: 223 PGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTAD 282
GK Y RL++ + + F+I NH +TI+EAD+ T+P D + + Q + ++ A
Sbjct: 192 QGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDAS 251
Query: 283 QPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGA---QPNSLALPATLPRFNDNLAVKT 339
QP+ Y + P G + SAI +Y GA +P S+ T P +
Sbjct: 252 QPVDNYWIRANPAFGNTGFAGGINSAI--LRYDGAPEIEPTSVQTTPTKPLNEVD----- 304
Query: 340 VMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIK 399
L L+P+PVP + G++ + N N G N +N+ +F+
Sbjct: 305 ----LHPLSPMPVPGSPEPG-----GVD----KPLNLVFNFNGTN-----FFINDHTFVP 346
Query: 400 PNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRV 459
P+V VL L+ A + +P + VL + +
Sbjct: 347 PSVPVL-------------------LQILSGAQAAQDLVPEGS-------VFVLPSNSSI 380
Query: 460 QIILQDTATVTTENHPIHLHGYNFYVV---GYGTGNYDPQTANFNLIDPPYMNTI--GVP 514
+I TA HP HLHG+ F VV G NYD +P + + + G P
Sbjct: 381 EISFPATANAPGFPHPFHLHGHAFAVVRSAGSSVYNYD---------NPIFRDVVSTGQP 431
Query: 515 VGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
G IRF +NPG WF+HCH D H G V+
Sbjct: 432 -GDNVTIRFETNNPGPWFLHCHIDFHLDAGFAVVM 465
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 217/510 (42%), Gaps = 76/510 (14%)
Query: 52 KDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPAY 106
+D + VN +FP P++ ++ DR ++ +TN + +T IHWHG Q + W DGPA+
Sbjct: 22 RDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAF 81
Query: 107 ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQFP 163
+ QCPI SG +F Y+F + Q GTF++H+H+S + G + G VVY PK +
Sbjct: 82 VNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDG-LRGPFVVYDPKDPHASRYDVD 140
Query: 164 YQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVP 223
+ +I L + W +L + P ++A ING G + + + I V
Sbjct: 141 NESTVITLTD-WYHTAARLGPRF------PLGADATLINGL-GRSASTPTAALAVINVQH 192
Query: 224 GKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQ 283
GK Y RL++ + F+I H LT++E D ++P D + + Q + ++ A+Q
Sbjct: 193 GKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQ 252
Query: 284 PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLG-AQPNSLALPATLPRFNDNLAVKTVMD 342
+G Y + P G + SAI +Q A+P + + +P NL M
Sbjct: 253 TVGNYWIRANPNFGTVGFAGGINSAILRYQGAPVAEPTTTQTTSVIPLIETNLHPLARMP 312
Query: 343 GLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNV 402
S P P +D L + N G N +NN SF P V
Sbjct: 313 VPGS----PTPGGVDKALNLAFNFN--------------GTN-----FFINNASFTPPTV 349
Query: 403 SVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQII 462
VL L+ A + +P + L + ++I
Sbjct: 350 PVL-------------------LQILSGAQTAQDLLPAGS-------VYPLPAHSTIEIT 383
Query: 463 LQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTI--GVPVGGW-A 519
L TA HP HLHG+ F VV + +N DP + + + G P G
Sbjct: 384 LPATALAPGAPHPFHLHGHAFAVV------RSAGSTTYNYNDPIFRDVVSTGTPAAGDNV 437
Query: 520 AIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
IRF DNPG WF+HCH D H G V
Sbjct: 438 TIRFQTDNPGPWFLHCHIDFHLEAGFAIVF 467
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 217/516 (42%), Gaps = 95/516 (18%)
Query: 55 VTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNA-----TIHWHGVRQRLSCWFDGPAYITQ 109
+ VNN+FP P++ D + + NQ + +IHWHG Q+ + W DGPA+I Q
Sbjct: 25 IVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAFINQ 84
Query: 110 CPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQFPYQE 166
CPI SG +F Y+F + Q GTF++H+H+S + G + G VVY P + +
Sbjct: 85 CPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDG-LRGPFVVYDPNDPHANLYDVDDES 143
Query: 167 HIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKT 226
+I L + W +L + P +++ ING G + + D+ I V GK
Sbjct: 144 TVITLAD-WYHVAAKLGPRF------PKGADSTLINGL-GRSTSTPTADLAVISVTKGKR 195
Query: 227 YLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIG 286
Y RL++ + F+I +H+LT++EAD T+P + D + + Q + ++ A+Q +
Sbjct: 196 YRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVD 255
Query: 287 KYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRS 346
Y + P G + SAI +Y A P P N + L
Sbjct: 256 NYWIRANPNFGTTGFADGVNSAI--LRYDDADP-------VEPVTNQTGTTLLLETDLHP 306
Query: 347 LNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAAS-------MNNISFIK 399
L +PVP GNP Q LN MA + +N SF
Sbjct: 307 LTSMPVP--------------------GNPTQGGADLNLN-MAFNFDGTNFFINGESFTP 345
Query: 400 PNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRV 459
P V VL L+ N A + +P+ + L + +
Sbjct: 346 PTVPVL-------------------LQIISGANTAQDLLPSGS-------VYSLPSNSSI 379
Query: 460 QIILQDTATVTTENHPIHLHGYNFYVV---GYGTGNYDPQTANFNLIDPPYMNTI--GVP 514
+I T HP HLHG+ F VV G + NYD DP + + + G P
Sbjct: 380 EITFPATTAAPGAPHPFHLHGHVFAVVRSAGSTSYNYD---------DPVWRDVVSTGTP 430
Query: 515 -VGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
G IRF DNPG WF+HCH D H G V+
Sbjct: 431 QAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFAVVM 466
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 218/513 (42%), Gaps = 80/513 (15%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++ V VN + PGP+V DR +I +TN + +T IHWHG Q + W DGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
+I QCPI G +F Y+F + Q GTF++H+H+S + G + G VVY P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDG-LRGPFVVYDPNDPHASRYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVV 222
+ +I L + W +L + GGA +A ING G + S ++ I+V
Sbjct: 140 DNDDTVITLAD-WYHTAAKLGPRF--PGGA----DATLINGK-GRAPSDSVAELSVIKVT 191
Query: 223 PGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTAD 282
GK Y RL++ N + F+I H LTI+E D+ ++P D + + Q + ++ A+
Sbjct: 192 KGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDAN 251
Query: 283 QPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMD 342
Q + Y + P G SAI +Y GA PA P N +VK +
Sbjct: 252 QAVDNYWIRANPNFGNVGFDGGINSAI--LRYDGA-------PAVEPTTNQTTSVKPL-- 300
Query: 343 GLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNV 402
E+D + V+ + G + N +N SF+ P V
Sbjct: 301 -----------NEVDLHPLVSTPVPGSPSSGGVDKAINMAFNFNGSNFFINGASFVPPTV 349
Query: 403 SVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQII 462
VL L+ A + +P+ + VL ++I
Sbjct: 350 PVL-------------------LQILSGAQTAQDLLPSGS-------VYVLPSNASIEIS 383
Query: 463 LQDTATVTTENHPIHLHGYNFYVV---GYGTGNYDPQTANFNLIDPPYMNTI--GVPVGG 517
TA HP HLHG+ F VV G NYD +P + + + G P G
Sbjct: 384 FPATAAAPGAPHPFHLHGHTFAVVRSAGSTVYNYD---------NPIFRDVVSTGTPAAG 434
Query: 518 W-AAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
IRF +NPG WF+HCH D H G V+
Sbjct: 435 DNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM 467
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 218/513 (42%), Gaps = 80/513 (15%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++ V VN + PGP+V DR +I +TN + +T IHWHG Q + W DGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
+I QCPI G +F Y+F + Q GTF++H+H+S + G + G VVY P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDG-LRGPFVVYDPNDPHASRYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVV 222
+ +I L + W +L + GGA +A ING G + S ++ I+V
Sbjct: 140 DNDDTVITLAD-WYHTAAKLGPRF--PGGA----DATLINGK-GRAPSDSVAELSVIKVT 191
Query: 223 PGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTAD 282
GK Y RL++ N + F+I H LTI+E D+ ++P D + + Q + ++ A+
Sbjct: 192 KGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDAN 251
Query: 283 QPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMD 342
Q + Y + P G SAI +Y GA PA P N +VK +
Sbjct: 252 QAVDNYWIRANPNFGNVGFDGGINSAI--LRYDGA-------PAVEPTTNQTTSVKPL-- 300
Query: 343 GLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNV 402
E+D + V+ + G + N +N SF+ P V
Sbjct: 301 -----------NEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFNGSNFFINGASFVPPTV 349
Query: 403 SVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQII 462
VL L+ A + +P+ + VL ++I
Sbjct: 350 PVL-------------------LQILSGAQTAQDLLPSGS-------VYVLPSNASIEIS 383
Query: 463 LQDTATVTTENHPIHLHGYNFYVV---GYGTGNYDPQTANFNLIDPPYMNTI--GVPVGG 517
TA HP HLHG+ F VV G NYD +P + + + G P G
Sbjct: 384 FPATAAAPGAPHPFHLHGHTFAVVRSAGSTVYNYD---------NPIFRDVVSTGTPAAG 434
Query: 518 W-AAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
IRF +NPG WF+HCH D H G V+
Sbjct: 435 DNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM 467
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 214/515 (41%), Gaps = 93/515 (18%)
Query: 55 VTVNNMFPGPVVYAQEDDRIIVKVTNQ-----SPYNATIHWHGVRQRLSCWFDGPAYITQ 109
V FPGPV+ D + NQ + +IHWHG Q+ + W DGPA+ITQ
Sbjct: 26 VNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQ 85
Query: 110 CPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQFPYQE 166
CPI G +F+Y F + GT+++H+H++ + G + G VVY P +
Sbjct: 86 CPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDG-LRGPFVVYDPNDPDANLYDVDDDT 144
Query: 167 HIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKT 226
II L +++ + + + +GGA +++ I+G + N +A + I V GK
Sbjct: 145 TIITLADWY-----HVLAKEMGAGGA-ITADSTLIDGLGRTHVNVAAVPLSVITVEVGKR 198
Query: 227 YLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIG 286
Y +RL++ + F+I H +TI+E D ++ + D + + Q + ++ A+QP+G
Sbjct: 199 YRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVG 258
Query: 287 KYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRS 346
Y + P +G SAI + DG +
Sbjct: 259 NYWIRANPNSGGEGFDGGINSAILRY-----------------------------DGATT 289
Query: 347 LNPVPVPKEIDANLFVTIGLN--VQKCRSGNPQQ---NCR-GLNNGVMAAS--MNNISFI 398
+PV V + + L+ + GNP Q +C L+ G + +N +SF
Sbjct: 290 ADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFACGNFVINGVSFT 349
Query: 399 KPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTR 458
P V VL L+ N A + +P+ + V+ +
Sbjct: 350 PPTVPVL-------------------LQICSGANTAADLLPSGS---------VISLPSN 381
Query: 459 VQIILQDTATVTTENHPIHLHGYNFYV---VGYGTGNYDPQTANFNLIDPPYMNTIGV-P 514
I + A HP HLHG++F V T NYD DP + + + +
Sbjct: 382 STIEIALPAGAAGGPHPFHLHGHDFAVSESASNSTSNYD---------DPIWRDVVSIGG 432
Query: 515 VGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
VG IRF DNPG WF+HCH D H G V
Sbjct: 433 VGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVF 467
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 217/509 (42%), Gaps = 73/509 (14%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
A+ VT P++ DDR +I ++T+ + AT IHWHG Q + DGPA
Sbjct: 42 ARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 101
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
++ QCPI ++F Y+F + Q GT+++H+H+S + G + GA VVY P +
Sbjct: 102 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDG-LRGAFVVYDPNDPHLSLYDV 160
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVV 222
+I + +++ L + A + ING + N SA + + V
Sbjct: 161 DDASTVITIADWYHSLSTVLFPNPNKAPPA---PDTTLINGLGRNSANPSAGQLAVVSVQ 217
Query: 223 PGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTAD 282
GK Y R+++ F+I H++T++E D +P + D + + GQ +V+V A+
Sbjct: 218 SGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEAN 277
Query: 283 QPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMD 342
Q +G Y + P G + SAI F+Y GA ++A P T L ++
Sbjct: 278 QAVGNYWIRANPSNGRNGFTGGINSAI--FRYQGA---AVAEPTTSQNSGTALNEANLIP 332
Query: 343 GLRSLNPV-PVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPN 401
+ P PVP D NL + IG N ++N FI P
Sbjct: 333 LINPGAPGNPVPGGADINLNLRIGRNATTAD-----------------FTINGAPFIPPT 375
Query: 402 VSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQI 461
V VL ++G N PND + G L ++I
Sbjct: 376 VPVL----------------------LQILSGVTN--PNDL--LPGGAVISLPANQVIEI 409
Query: 462 ILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGW-AA 520
+ NHP HLHG+NF VV P ++ +N ++P + + + GG
Sbjct: 410 SIPGGG-----NHPFHLHGHNFDVV------RTPGSSVYNYVNPVRRDVVSIGGGGDNVT 458
Query: 521 IRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
RF DNPG WF+HCH D H GL V
Sbjct: 459 FRFVTDNPGPWFLHCHIDWHLEAGLAVVF 487
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 221/510 (43%), Gaps = 76/510 (14%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++ V VN + PGP+V DR +I +TN + T +HWHG Q+ + W DGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
+I QCPI G +F Y+F + Q GTF++H+H+S + G + G VVY P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDG-LRGPFVVYDPNDPHASRYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVV 222
+ +I L + W +L + P ++A ING + SA ++ I+V
Sbjct: 140 DNDDTVITLAD-WYHTAAKLGPRF------PAGADATLINGKGRAPSDTSA-ELSVIKVT 191
Query: 223 PGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTAD 282
GK RL++ + F+I H LTI+E D+ ++P S D + + Q + ++ A+
Sbjct: 192 KGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNAN 251
Query: 283 QPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMD 342
Q + Y + P G + SAI +Y GA PA P N +VK + +
Sbjct: 252 QAVDNYWIRANPNFGNVGFNGGINSAI--LRYDGA-------PAVEPTTNQTTSVKPLNE 302
Query: 343 -GLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPN 401
L L PVP + G++ ++ N N G N +N SF+ P+
Sbjct: 303 VNLHPLVSTPVPGSPSSG-----GVD----KAINMAFNFNGSN-----FFINGASFVPPS 348
Query: 402 VSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQI 461
V VL L+ A + +P+ + VL ++I
Sbjct: 349 VPVL-------------------LQILSGAQTAQDLLPSGS-------VXVLPSNASIEI 382
Query: 462 ILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTI--GVPVGGW- 518
TA HP HLHG+ F VV +N +P + + + G P G
Sbjct: 383 SFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV------YNYSNPIFRDVVSTGTPAAGDN 436
Query: 519 AAIRFTADNPGVWFMHCHFDIHQSWGLGTV 548
IRF +NPG WF+HCH D H G V
Sbjct: 437 VTIRFLTNNPGPWFLHCHIDFHLEGGFAVV 466
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 219/512 (42%), Gaps = 78/512 (15%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++D V VN PGP++ + D+ +I +TN + +T +HWHG Q+ + W DGPA
Sbjct: 21 SRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
++ QCPI +G +F Y+F+ Q GTF++H+H+S + G G VVY P +
Sbjct: 81 FVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQYCDGD-RGPFVVYDPNDPSANLYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPP-PSNAYTINGHPGPNYNCSANDVYKIEV 221
+I L + W Q +G A P ++A ING G + + D+ I V
Sbjct: 140 DNLNTVITLTD-WYHTAAQ-------NGPAKPGGADATLINGQ-GRGPSSPSADLAVISV 190
Query: 222 VPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTA 281
GK Y RL++ + F+I H++TI++ D+ +P ++ + Q + ++ A
Sbjct: 191 TAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSFILNA 250
Query: 282 DQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTV- 340
+Q + Y + P V F N A +Y GA AT P + +V+ +
Sbjct: 251 NQAVNNYWIRANPNQG--NVGFTNGINSAILRYSGAA-------ATQPTTSQTSSVQPLD 301
Query: 341 MDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKP 400
L L VP V G+N+ N N G N+ V A SF+ P
Sbjct: 302 QTNLHPLTATAVPGSP-----VAGGVNLAI----NQAFNFNGTNHFVDGA-----SFVPP 347
Query: 401 NVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQ 460
V VL D + L + ++P+D N ++
Sbjct: 348 TVPVLSQIVSGAQS--AADLLASGLVY---------SLPSDAN---------------IE 381
Query: 461 IILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTI--GVPVGGW 518
I T+ HP HLHG+ F VV + +N DP + +T+ G P
Sbjct: 382 ISFPATSAAAGGPHPFHLHGHAFAVV------RSAGSTTYNYNDPIFRDTVSTGTPAAND 435
Query: 519 -AAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
IRF +NPG WF+HCH D H G V
Sbjct: 436 NVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 209/508 (41%), Gaps = 95/508 (18%)
Query: 63 GPVVYAQEDDRIIVKVTNQSP-----YNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
GP++ ++D + V N +IHWHG+ QR + W DG + QCPI G
Sbjct: 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGTVY-----GAIVVYPKTGVPYPFQFPYQEH----I 168
F Y+FT GTF++H+H GT Y G +V+Y P Y E I
Sbjct: 93 FLYKFTPAGHAGTFWYHSHF----GTQYCDGLRGPMVIYDDND---PHAALYDEDDENTI 145
Query: 169 IILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYL 228
I L +++ ++ G A P +A ING G A ++ + V GK Y
Sbjct: 146 ITLADWYHIPAPSIQ------GAAQP--DATLINGK-GRYVGGPAAELSIVNVEQGKKYR 196
Query: 229 LRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKY 288
+RLI+ + F+I H+LTI+E D E T+P + DR+ + GQ + ++ A+QP+ Y
Sbjct: 197 MRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNY 256
Query: 289 SMAMGPYMSAQGV--SFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRS 346
+ P G+ +F N A +Y GA + A P T N N A D
Sbjct: 257 WIRAQPNKGRNGLAGTFANGVNSAILRYAGA---ANADPTT--SANPNPAQLNEADLHAL 311
Query: 347 LNP----VPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNV 402
++P +P P D NL +G + + ++N ++ P+V
Sbjct: 312 IDPAAPGIPTPGAADVNLRFQLGFSGGRF-------------------TINGTAYESPSV 352
Query: 403 SVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQII 462
L L+ A + +P + V E +
Sbjct: 353 PTL-------------------LQIMSGAQSANDLLPAGS---------VYELPRNQVVE 384
Query: 463 LQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPV-GGWAAI 521
L A V HP HLHG+ F VV ++ +N ++P + + + V G I
Sbjct: 385 LVVPAGVLGGPHPFHLHGHAFSVV------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTI 438
Query: 522 RFTADNPGVWFMHCHFDIHQSWGLGTVL 549
RF DNPG WF HCH + H GL V
Sbjct: 439 RFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 209/508 (41%), Gaps = 95/508 (18%)
Query: 63 GPVVYAQEDDRIIVKVTNQSP-----YNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
GP++ ++D + V N +IHWHG+ QR + W DG + QCPI G
Sbjct: 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGTVY-----GAIVVYPKTGVPYPFQFPYQEH----I 168
F Y+FT GTF++H+H GT Y G +V+Y P Y E I
Sbjct: 93 FLYKFTPAGHAGTFWYHSHF----GTQYCDGLRGPMVIYDDND---PHAALYDEDDENTI 145
Query: 169 IILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYL 228
I L +++ ++ G A P +A ING G A ++ + V GK Y
Sbjct: 146 ITLADWYHIPAPSIQ------GAAQP--DATLINGK-GRYVGGPAAELSIVNVEQGKKYR 196
Query: 229 LRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKY 288
+RLI+ + F+I H+LTI+E D E T+P + DR+ + GQ + ++ A+QP+ Y
Sbjct: 197 MRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNY 256
Query: 289 SMAMGPYMSAQGVS--FQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRS 346
+ P G++ F N A +Y GA + A P T N N A D
Sbjct: 257 WIRAQPNKGRNGLAGTFANGVNSAILRYAGA---ANADPTT--SANPNPAQLNEADLHAL 311
Query: 347 LNP----VPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNV 402
++P +P P D NL +G + + ++N ++ P+V
Sbjct: 312 IDPAAPGIPTPGAADVNLRFQLGFSGGRF-------------------TINGTAYESPSV 352
Query: 403 SVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQII 462
L L+ A + +P + V E +
Sbjct: 353 PTL-------------------LQIMSGAQSANDLLPAGS---------VYELPRNQVVE 384
Query: 463 LQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPV-GGWAAI 521
L A V HP HLHG+ F VV ++ +N ++P + + + V G I
Sbjct: 385 LVVPAGVLGGPHPFHLHGHAFSVV------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTI 438
Query: 522 RFTADNPGVWFMHCHFDIHQSWGLGTVL 549
RF DNPG WF HCH + H GL V
Sbjct: 439 RFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 217/518 (41%), Gaps = 90/518 (17%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++ V VN PGP++ DR +I +TN + +T IHWHG Q+ + W DGPA
Sbjct: 21 SRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
+I QCPI SG +F Y+F + Q GTF++H+H+S + G + G VVY P +
Sbjct: 81 FINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDG-LRGPFVVYDPNDPAADLYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVV 222
+ +I L + W +L P ++A ING G + + + D+ I V
Sbjct: 140 DNDDTVITLVD-WYHVAAKLGPAF------PLGADATLINGK-GRSPSTTTADLSVISVT 191
Query: 223 PGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTAD 282
PGK Y RL++ + F+I H +TI+E D+ T P D + + Q + ++ A+
Sbjct: 192 PGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEAN 251
Query: 283 QPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGA---QPNSLALPATLPRFNDNL--AV 337
Q + Y + P G + SAI +Y GA +P + +T P NL V
Sbjct: 252 QAVDNYWIRANPNFGNVGFTGGINSAI--LRYDGAAAVEPTTTQTTSTAPLNEVNLHPLV 309
Query: 338 KTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISF 397
T + G PV +D + + N G N +N SF
Sbjct: 310 ATAVPG------SPVAGGVDLAINMAFNFN--------------GTN-----FFINGASF 344
Query: 398 IKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGT 457
P V VL L+ A + +P+ + L
Sbjct: 345 TPPTVPVL-------------------LQIISGAQNAQDLLPSGS-------VYSLPSNA 378
Query: 458 RVQIILQDTATVTTENHPIHLHGYNFYVV---GYGTGNYDPQTANFNLIDPPYMNTI--G 512
++I TA HP HLHG+ F VV G NYD +P + + + G
Sbjct: 379 DIEISFPATAAAPGAPHPFHLHGHAFAVVRSAGSTVYNYD---------NPIFRDVVSTG 429
Query: 513 VPVGGW-AAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
P G IRF DNPG WF+HCH D H G V
Sbjct: 430 TPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 138/514 (26%), Positives = 216/514 (42%), Gaps = 87/514 (16%)
Query: 55 VTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPAYITQ 109
V N +FPGP++ + D +I +TN + T IHWHG+ Q + W DGPA++ Q
Sbjct: 25 VVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWADGPAFVNQ 84
Query: 110 CPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVYPKTGVPYPFQFPYQEH 167
CPI SG +F Y+FT+ Q GTF++H+H+S + G + G +VVY + PY + +
Sbjct: 85 CPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDG-LRGPLVVYDPSD-PYASMYDVDDD 142
Query: 168 --IIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGK 225
+I L + W +L PP +++ ING G +A+D+ I V K
Sbjct: 143 TTVITLSD-WYHTAAKLGPAF------PPNADSVLINGL-GRFAGGNASDLAVITVEQNK 194
Query: 226 TYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPI 285
Y RL++ + F+I H +TI+E D +P D + + Q + ++ A Q +
Sbjct: 195 RYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSV 254
Query: 286 GKYSMAMGPYMSAQGVSFQNISAIAYFQYLGA---QPNSLALPATLPRFNDNLAVKTVMD 342
Y + P + SAI +Y GA P + A + +P +L
Sbjct: 255 DNYWIRAIPNTGTIDTTGGLNSAI--LRYSGADIVDPTANATTSVIPLVETDL------- 305
Query: 343 GLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNV 402
VP+ V G+++ N + G N +NN + I P V
Sbjct: 306 -------VPLDSPAAPGDPVVGGVDLAM----NLDFSFNGTN-----FFINNETLIPPTV 349
Query: 403 SVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQII 462
VL L+ A + +P + L + +++
Sbjct: 350 PVL-------------------LQILSGAQSASDLLPTGS-------VYTLPLNSTIELS 383
Query: 463 LQDTATVTTENHP-----IHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTI--GVPV 515
T N P HLHG+ F VV ++++N ++P +T+ G P
Sbjct: 384 FPITTVNGVTNAPGAPHPFHLHGHAFSVVRSA------GSSDYNYVNPVRRDTVSTGNP- 436
Query: 516 GGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVL 549
G IRFT DN G WF+HCH D H G V
Sbjct: 437 GDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVF 470
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 209/512 (40%), Gaps = 86/512 (16%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDRIIVKVTN-QSPYNATIHWHGVRQRLSCWFDGPAYITQ 109
++ ++T N FP P + + DR+ + +TN + N ++H+HG+ Q + DG ++TQ
Sbjct: 21 SRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80
Query: 110 CPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGTVYGAIVVYPKTGVPYPFQFPYQEHII 169
CPI G T Y FT+ GT+++H+H + + PY + +E +
Sbjct: 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPYDYD---EELSL 137
Query: 170 ILGEYWLQDVVQLERQVLA----SGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGK 225
L E++ V L + ++ +G P P N N + N + EV P
Sbjct: 138 SLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIV---------NNTMNLTW--EVQPDT 186
Query: 226 TYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPI 285
TYLLR++N G + +F I +H++T+VE D T+ TD + + Q VLV
Sbjct: 187 TYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDT 246
Query: 286 GKYSMAMGPY---MSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMD 342
K M + M S ++A +Y Y A LP N ++ +D
Sbjct: 247 DKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKT--------AALPTQNYVDSIDNFLD 298
Query: 343 G--LRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKP 400
L+ + E D + V + ++ L NGV A NNI++ P
Sbjct: 299 DFYLQPYEKEAIYGEPDHVITVDVVMD--------------NLKNGVNYAFFNNITYTAP 344
Query: 401 NVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQ 460
V L V + + N + T T +LE V+
Sbjct: 345 KVPTLMT-----------------------VLSSGDQANNSEIYGSNTHTFILEKDEIVE 381
Query: 461 IIL--QDTATVTTENHPIHLHGYNFYVV----------GYGTGNYDPQTANFNLIDPPYM 508
I+L QDT T HP HLHG+ F + G ++DP P
Sbjct: 382 IVLNNQDTGT-----HPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRR 436
Query: 509 NTIGVPVGGWAAIRFTADNPGVWFMHCHFDIH 540
+T+ V IRF ADNPGVWF HCH + H
Sbjct: 437 DTLYVRPQSNFVIRFKADNPGVWFFHCHIEWH 468
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 215/510 (42%), Gaps = 76/510 (14%)
Query: 51 AKDIVTVNNMFPGPVVYAQEDDR----IIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPA 105
++ V VN + PGP+V DR +I +TN + T +HWHG Q+ + W DGPA
Sbjct: 21 SRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPA 80
Query: 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLRGTVYGAIVVY-PKTGVPYPFQF 162
+I QCPI G +F Y+F + Q GTF++H+H+S + G + G VVY P +
Sbjct: 81 FINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDG-LRGPFVVYDPNDPHASRYDV 139
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVV 222
+ I L + W +L P +++ ING G + S+ + + V
Sbjct: 140 DNDDTTITLAD-WYHTAAKLGPAF------PNGADSTLINGK-GRAPSDSSAQLSVVSVT 191
Query: 223 PGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTAD 282
GK RL++ + F+I H TI+E D+ ++P +TD + + Q + + A+
Sbjct: 192 KGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNAN 251
Query: 283 QPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMD 342
Q + Y + P G + SAI +Y GA PA P N + + + + +
Sbjct: 252 QAVDNYWIRANPNFGNVGFNGGINSAI--LRYDGA-------PAVEPTTNQSTSTQPLNE 302
Query: 343 -GLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPN 401
L L PVP A G++ ++ N N G N +N SF P+
Sbjct: 303 TNLHPLVSTPVPGSPAAG-----GVD----KAINMAFNFNGSN-----FFINGASFTPPS 348
Query: 402 VSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQI 461
V VL L+ A + +P+ + L ++I
Sbjct: 349 VPVL-------------------LQILSGAQTAQDLLPSGS-------VXTLPSNASIEI 382
Query: 462 ILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTI--GVPVGGW- 518
TA HP HLHG+ F VV +N +P + + + G P G
Sbjct: 383 SFPATAAAPGAPHPFHLHGHVFAVVRSAGSTV------YNYSNPIFRDVVSTGTPAAGDN 436
Query: 519 AAIRFTADNPGVWFMHCHFDIHQSWGLGTV 548
IRF +NPG WF+HCH D H G V
Sbjct: 437 VTIRFLTNNPGPWFLHCHIDFHLEGGFAVV 466
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 212/525 (40%), Gaps = 87/525 (16%)
Query: 54 IVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPAYITQCPI 112
++ VN+ GP + A D I V V N N T +HWHG+RQ + + DG +T+CPI
Sbjct: 98 VMLVNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPI 157
Query: 113 Q-SGQTFTYEFTMFQQKGTFFWHAHVSWLRGT-VYGAIVVYPKTGVPYPFQFPYQEHIII 170
G TY+F Q GT ++H+H S G V G I + +PY +
Sbjct: 158 PPKGGRKTYKFRA-TQYGTSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDL----GVFP 212
Query: 171 LGEYWLQDVVQLERQVLASGGAPPPSNAYTING---HPGPNYNCSANDVYKIEVVPGKTY 227
L +Y+ + +L ++G PPS+ NG HP A Y + + PGK +
Sbjct: 213 LMDYYYRSADELVHFTQSNGA--PPSDNVLFNGTARHP----ETGAGQWYNVTLTPGKRH 266
Query: 228 LLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGK 287
LR+IN + ++ H +T++ D F+ + L GQ +V + A+ P+G
Sbjct: 267 RLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGN 326
Query: 288 Y--SMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLR 345
Y ++ G + S N A F+Y GA PATLP + L V M L
Sbjct: 327 YWFNVTFGDGLCG---SSNNKFPAAIFRYQGA-------PATLPT-DQGLPVPNHM-CLD 374
Query: 346 SLNPVP-VPKEIDANLFV-----TIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIK 399
+LN P V + N FV T+G+ + G P + K
Sbjct: 375 NLNLTPVVTRSAPVNNFVKRPSNTLGVTLDI--GGTP------------------LFVWK 414
Query: 400 PNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRV 459
N S + + K D+V + P S N + ++ T
Sbjct: 415 VNGSAINVDWGK--------------PILDYVMSGNTSYP---VSDNIVQVDAVDQWTYW 457
Query: 460 QIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPP------------Y 507
I T + + HP+HLHG++F V+G P ++ DP
Sbjct: 458 LIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDEL-PSAGVRHIFDPAKDLPRLKGNNPVR 516
Query: 508 MNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552
+ +P GGW + F DNPG W HCH H S GL + +
Sbjct: 517 RDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLER 561
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 22/268 (8%)
Query: 33 TRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNAT-IHWH 91
TR Y ++ + + + +T N PGP + A D +I+ VTN +N T IHWH
Sbjct: 67 TREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWH 126
Query: 92 GVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT-VYGAIVV 150
G+RQ S +DG +TQCPI G T TY+F + Q GT ++H+H S G ++G +++
Sbjct: 127 GIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLII 185
Query: 151 YPKTGVPYPFQFPYQEHI-IILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNY 209
P Y E + +I + W + V E A GAPP +NG +
Sbjct: 186 NG------PATADYDEDVGVIFLQDWAHESV-FEIWDTARLGAPPALENTLMNG--TNTF 236
Query: 210 NCSAN---------DVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK 260
+CSA+ +++ V G Y LRLIN G++ FAI NH LT++ D
Sbjct: 237 DCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIV 296
Query: 261 PFSTDRVMLGPGQTVNVLVTADQPIGKY 288
P++TD +++G GQ +V+V A+ Y
Sbjct: 297 PYTTDTLLIGIGQRYDVIVEANAAADNY 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 474 HPIHLHGYNFYVVGYGTG--NYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVW 531
HPIHLHG++F++V T N D A FNL++PP + +P G+ AI F DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 532 FMHCHFDIHQSWGLG 546
+HCH H S GL
Sbjct: 523 LLHCHIAWHASEGLA 537
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 22/268 (8%)
Query: 33 TRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNAT-IHWH 91
TR Y ++ + + + +T N PGP + A D +I+ VTN +N T IHWH
Sbjct: 67 TREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWH 126
Query: 92 GVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT-VYGAIVV 150
G+RQ S +DG +TQCPI G T TY+F + Q GT ++H+H S G ++G +++
Sbjct: 127 GIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLII 185
Query: 151 YPKTGVPYPFQFPYQEHI-IILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNY 209
P Y E + +I + W + V E A GAPP +NG +
Sbjct: 186 NG------PATADYDEDVGVIFLQDWAHESV-FEIWDTARLGAPPALENTLMNG--TNTF 236
Query: 210 NCSAN---------DVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK 260
+CSA+ +++ V G Y LRLIN G++ FAI NH LT++ D
Sbjct: 237 DCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIV 296
Query: 261 PFSTDRVMLGPGQTVNVLVTADQPIGKY 288
P++TD +++G GQ +V+V A+ Y
Sbjct: 297 PYTTDTLLIGIGQRYDVIVEANAAADNY 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 474 HPIHLHGYNFYVVGYGTG--NYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVW 531
HPIHLHG++F++V T N D A FNL++PP + +P G+ AI F DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 532 FMHCHFDIHQSWGLG 546
+HCH H S G+
Sbjct: 523 LLHCHIAWHASEGMA 537
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 119/261 (45%), Gaps = 24/261 (9%)
Query: 32 STRFYEFKIQATRVNKLCNAKDIVTV--NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIH 89
R ++ I+ TR+ L +D T N P P+++ E D + V VTN + TIH
Sbjct: 1 EKREFDLSIEDTRI-VLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIH 59
Query: 90 WHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS-----WLRGTV 144
WHG+ QR + DG + TQ I+ G TFTY+F + GT ++H HV+ +RG +
Sbjct: 60 WHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRG-M 117
Query: 145 YGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQVLASGGAPPPS-NAYTING 203
+G ++V PK P P + + I++ L D V GG P + YTIN
Sbjct: 118 WGPLIVEPKN--PLPIEKTVTKDYILM----LSDWVSSWANKPGEGGIPGDVFDYYTINA 171
Query: 204 HPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFS 263
P + I V G LRLI AG ++ + + KP
Sbjct: 172 KSFP-------ETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFPLDKPIK 224
Query: 264 TDRVMLGPGQTVNVLVTADQP 284
D V++GPG+ +V++ D P
Sbjct: 225 GDTVLIGPGERYDVILNMDNP 245
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 474 HPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFM 533
H IH HG+ + + G F L P +T+ + G + DNPG+W +
Sbjct: 200 HAIHTHGH-ISQIAFKDG--------FPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMI 250
Query: 534 HCHFDIHQSWG 544
H H D H + G
Sbjct: 251 HDHVDTHTTNG 261
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 133/319 (41%), Gaps = 29/319 (9%)
Query: 52 KDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPAYITQC 110
+ ++ +N GP + A D + V V N N T IHWHG+ Q+ + DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTEC 114
Query: 111 PIQ-SGQTFTYEFTMFQQKGTFFWHAHVSWLRGT-VYGAIVVYPKTGVPYPFQFPYQEHI 168
PI G TY + +Q GT ++H+H S G V G I + +PY +
Sbjct: 115 PIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDIDL----GV 169
Query: 169 IILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYL 228
+ +Y+ + L APP S+ ING N N + + PGK +
Sbjct: 170 FPITDYYYRAADDLVH--FTQNNAPPFSDNVLING-TAVNPNTGEGQYANVTLTPGKRHR 226
Query: 229 LRLINAGLNMENFFAIA--NHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIG 286
LR++N + EN F ++ NH +T++ AD + D + L GQ +V++ A +
Sbjct: 227 LRILNT--STENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPD 284
Query: 287 KYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQ---PNSLALPATLPRFNDNLAVKTVMDG 343
Y + A N A F Y GA P P + D L V+ V
Sbjct: 285 NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPV--- 341
Query: 344 LRSLNPVPVPKEIDANLFV 362
VP+ + N FV
Sbjct: 342 --------VPRSVPVNSFV 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 474 HPIHLHGYNFYVVGYGTGN---------YDP--QTANFNLIDPPYMNTIGVPVGGWAAIR 522
HP+HLHG++F V+G +DP A N +PP +T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 523 FTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552
F DNPG W HCH H S GL + +
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFLER 520
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 133/319 (41%), Gaps = 29/319 (9%)
Query: 52 KDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPAYITQC 110
+ ++ +N GP + A D + V V N N T IHWHG+ Q+ + DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTEC 114
Query: 111 PIQ-SGQTFTYEFTMFQQKGTFFWHAHVSWLRGT-VYGAIVVYPKTGVPYPFQFPYQEHI 168
PI G TY + +Q GT ++H+H S G V G I + +PY +
Sbjct: 115 PIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDIDL----GV 169
Query: 169 IILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYL 228
+ +Y+ + L APP S+ ING N N + + PGK +
Sbjct: 170 FPITDYYYRAADDLVH--FTQNNAPPFSDNVLING-TAVNPNTGEGQYANVTLTPGKRHR 226
Query: 229 LRLINAGLNMENFFAIA--NHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIG 286
LR++N + EN F ++ NH +T++ AD + D + L GQ +V++ A +
Sbjct: 227 LRILNT--STENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPD 284
Query: 287 KYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQ---PNSLALPATLPRFNDNLAVKTVMDG 343
Y + A N A F Y GA P P + D L V+ V
Sbjct: 285 NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPV--- 341
Query: 344 LRSLNPVPVPKEIDANLFV 362
VP+ + N FV
Sbjct: 342 --------VPRSVPVNSFV 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 474 HPIHLHGYNFYVVGYGTGN---------YDP--QTANFNLIDPPYMNTIGVPVGGWAAIR 522
HP+HLHG++F V+G +DP A N +PP +T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 523 FTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552
F DNPG W HCH H S GL + +
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFLER 520
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 133/319 (41%), Gaps = 29/319 (9%)
Query: 52 KDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNAT-IHWHGVRQRLSCWFDGPAYITQC 110
+ ++ +N GP + A D + V V N N T IHWHG+ Q+ + DG +T+C
Sbjct: 55 EKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTEC 114
Query: 111 PIQ-SGQTFTYEFTMFQQKGTFFWHAHVSWLRGT-VYGAIVVYPKTGVPYPFQFPYQEHI 168
PI G TY + +Q GT ++H+H S G V G I + +PY +
Sbjct: 115 PIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDIDL----GV 169
Query: 169 IILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYL 228
+ +Y+ + L APP S+ ING N N + + PGK +
Sbjct: 170 FPITDYYYRAADDLVH--FTQNNAPPFSDNVLINGT-AVNPNTGEGQYANVTLTPGKRHR 226
Query: 229 LRLINAGLNMENFFAIA--NHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIG 286
LR++N + EN F ++ NH +T++ AD + D + L GQ +V++ A +
Sbjct: 227 LRILNT--STENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPD 284
Query: 287 KYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQ---PNSLALPATLPRFNDNLAVKTVMDG 343
Y + A N A F Y GA P P + D L V+ V
Sbjct: 285 NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPV--- 341
Query: 344 LRSLNPVPVPKEIDANLFV 362
VP+ + N FV
Sbjct: 342 --------VPRSVPVNSFV 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 474 HPIHLHGYNFYVVGYGTGN---------YDP--QTANFNLIDPPYMNTIGVPVGGWAAIR 522
HP+HLHG++F V+G +DP A N +PP +T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 523 FTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552
F DNPG W HCH H S GL + +
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFLER 520
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 113/251 (45%), Gaps = 31/251 (12%)
Query: 54 IVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQ 113
++T FPGP + + D + + + N+ P +HWHG+ +S D P I
Sbjct: 37 LLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL--PISPKVDDPF----LEIP 90
Query: 114 SGQTFTYEFTMFQQ-KGTFFWHAHVS-----WLRGTVYGAIVVYPKTGVPYPFQFPYQEH 167
G+++TYEFT+ ++ GTF++H H+ L + GA+VV P +EH
Sbjct: 91 PGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEH 149
Query: 168 IIILGEYWLQDVVQLERQVLASGGAPPPSNAYT-INGHPGPNYNCSANDVYKIEVVPGKT 226
+++L + LQ GG P P +NG G N + +V K
Sbjct: 150 LLVLKDLALQ------------GGRPAPHTPMDWMNGKEG--DLVLVNGALRPTLVAQKA 195
Query: 227 YL-LRLINAGLNMENFFAIANHKLTIVEADAEY-TKPFSTDRVMLGPGQTVNVLVTADQP 284
L LRL+NA A+ +H L ++ AD + +P ++L PG+ VLV +
Sbjct: 196 TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRKE 255
Query: 285 IGKYSMAMGPY 295
G++ + PY
Sbjct: 256 -GRFLLQALPY 265
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Query: 473 NHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWF 532
+HP HLH + F V+ G G P A + + + + G A + G
Sbjct: 369 DHPFHLHVHPFQVLSVG-GRPFPYRA--------WKDVVNLKAGEVARLLVPLREKGRTV 419
Query: 533 MHCHFDIHQSWGLGTVLIV 551
HCH H+ G+ VL V
Sbjct: 420 FHCHIVEHEDRGMMGVLEV 438
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 25 ATWPRGRSTRFYEFKIQATRVNKLCNAKDIV---TVNNMFPGPVVYAQEDDRIIVKVTNQ 81
+T P GR+ R E+ I A + I + N PGP ++A+E D + + TN
Sbjct: 26 STLPDGRTLR--EWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNA 83
Query: 82 SPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWL- 140
+ TIH+HGV + DG I I GQ+FTYEF GT +H H S L
Sbjct: 84 GAHPHTIHFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLA 139
Query: 141 ---RGTVYGAIVVYPKTGVP 157
+YG +V PK G P
Sbjct: 140 PHIAKGLYGGFIVEPKEGRP 159
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 88/234 (37%), Gaps = 30/234 (12%)
Query: 56 TVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSG 115
T N + P P + E D++ + V N+ TIHWHGV + DG + PI +G
Sbjct: 74 TYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGV--PVPPDQDGSPH---DPILAG 128
Query: 116 QTFTYEFTMFQQK-GTFFWHAHVSWLRGT-----VYGAIVVYPKTGVPYPFQFPYQEHII 169
+ Y F + Q GT+++H H + + GA V+ K +E +
Sbjct: 129 EERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL----KEKDL 184
Query: 170 ILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYL- 228
++ + L + Q+ L ING P + N+ +I YL
Sbjct: 185 MISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN 244
Query: 229 LRLINAGLNMENFFAIANHKLTIVEADAEY-TKPFSTDRVMLGPGQTVNVLVTA 281
LR+ A K +V D K + + L P V VL+ A
Sbjct: 245 LRIQGA-------------KFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDA 285
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 473 NHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWF 532
+HP H+HG F ++ N Q A F + +TI V +R D G+
Sbjct: 406 DHPFHIHGTQFELISSKL-NGKVQKAEFRAL----RDTINVRPNEELRLRMKQDFKGLRM 460
Query: 533 MHCHFDIHQSWGLGTVLIVK 552
HCH H+ G+ L VK
Sbjct: 461 YHCHILEHEDLGMMGNLEVK 480
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 474 HPIHLHGYNFY--VVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVW 531
H HLHG+ + G T YDP LID +N GV G + I PG+W
Sbjct: 212 HTFHLHGHRWLDNRTGMRTSEYDPSP----LIDIKDLNP-GVSFG-FQVIAGEGVGPGMW 265
Query: 532 FMHCHFDIHQSWGLGTVLIVKNGKGEL 558
HCH H G+ + +V+N G +
Sbjct: 266 MYHCHVQNHSDMGMAGMFLVRNADGTM 292
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 57/183 (31%)
Query: 62 PGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYE 121
PGP++ E D + ++ TN A++H HG+ +S DG A + + ++ G T TY
Sbjct: 37 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDAEISS--DGTA-MNKSDVEPGGTRTYT 93
Query: 122 FTMFQ----QKGTF------FWHAH---------VSWLRGTVYGAIVVYPKTGVPYPFQF 162
+ + GT+ +WH H +R +YG ++V K V
Sbjct: 94 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----L 148
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTING---HPGPNYNCSANDVYKI 219
P H I+ N TIN H GP++ + D ++
Sbjct: 149 PDATHTIVF-------------------------NDMTINNRKPHTGPDFEATVGD--RV 181
Query: 220 EVV 222
E+V
Sbjct: 182 EIV 184
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 11/105 (10%)
Query: 456 GTRVQIILQDTATVTTENHPIHLHGYNFY--VVGYGTGNYDPQTANFNLIDPPYMNTIGV 513
G RV+I++ T H H+HG+ + G TG DP N I P ++ G
Sbjct: 178 GDRVEIVM---ITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGP-ADSFGF 233
Query: 514 PVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGEL 558
+ I G W HCH H G+ + +VK G +
Sbjct: 234 QI-----IAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 273
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 57/183 (31%)
Query: 62 PGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYE 121
PGP++ E D + ++ TN A++H HG+ +S DG A + + ++ G T TY
Sbjct: 75 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISS--DGTA-MNKSDVEPGGTRTYT 131
Query: 122 FTMFQ----QKGTF------FWHAH---------VSWLRGTVYGAIVVYPKTGVPYPFQF 162
+ + GT+ +WH H +R +YG ++V K V
Sbjct: 132 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----L 186
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTING---HPGPNYNCSANDVYKI 219
P H I+ N TIN H GP++ + D ++
Sbjct: 187 PDATHTIVF-------------------------NDMTINNRKPHTGPDFEATVGD--RV 219
Query: 220 EVV 222
E+V
Sbjct: 220 EIV 222
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 11/105 (10%)
Query: 456 GTRVQIILQDTATVTTENHPIHLHGYNFY--VVGYGTGNYDPQTANFNLIDPPYMNTIGV 513
G RV+I++ T H H+HG+ + G TG DP N I P ++ G
Sbjct: 216 GDRVEIVM---ITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGP-ADSFGF 271
Query: 514 PVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGEL 558
+ I G W HCH H G+ + +VK G +
Sbjct: 272 QI-----IAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 311
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 57/183 (31%)
Query: 62 PGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYE 121
PGP++ E D + ++ TN A++H HG+ +S DG A + + ++ G T TY
Sbjct: 34 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISS--DGTA-MNKSDVEPGGTRTYT 90
Query: 122 FTMFQ----QKGTF------FWHAH---------VSWLRGTVYGAIVVYPKTGVPYPFQF 162
+ + GT+ +WH H +R +YG ++V K V
Sbjct: 91 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----L 145
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTING---HPGPNYNCSANDVYKI 219
P H I+ N TIN H GP++ + D ++
Sbjct: 146 PDATHTIVF-------------------------NDMTINNRKPHTGPDFEATVGD--RV 178
Query: 220 EVV 222
E+V
Sbjct: 179 EIV 181
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 11/105 (10%)
Query: 456 GTRVQIILQDTATVTTENHPIHLHGYNFY--VVGYGTGNYDPQTANFNLIDPPYMNTIGV 513
G RV+I++ T H H+HG+ + G TG DP N I P ++ G
Sbjct: 175 GDRVEIVM---ITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGP-ADSFGF 230
Query: 514 PVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGEL 558
+ I G W HCH H G+ + +VK G +
Sbjct: 231 QI-----IAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 270
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 57/183 (31%)
Query: 62 PGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYE 121
PGP++ E D + ++ TN A++H HG+ +S DG A + + ++ G T TY
Sbjct: 38 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDFEISS--DGTA-MNKSDVEPGGTRTYT 94
Query: 122 FTMFQ----QKGTF------FWHAH---------VSWLRGTVYGAIVVYPKTGVPYPFQF 162
+ + GT+ +WH H +R +YG ++V K V
Sbjct: 95 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----L 149
Query: 163 PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTING---HPGPNYNCSANDVYKI 219
P H I+ N TIN H GP++ + D ++
Sbjct: 150 PDATHTIVF-------------------------NDMTINNRKPHTGPDFEATVGD--RV 182
Query: 220 EVV 222
E+V
Sbjct: 183 EIV 185
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 11/105 (10%)
Query: 456 GTRVQIILQDTATVTTENHPIHLHGYNFY--VVGYGTGNYDPQTANFNLIDPPYMNTIGV 513
G RV+I++ T H H+HG+ + G TG DP N I P +
Sbjct: 179 GDRVEIVM---ITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSF--- 232
Query: 514 PVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGEL 558
G+ I G W HCH H G+ + +VK G +
Sbjct: 233 ---GFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 274
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 96/249 (38%), Gaps = 42/249 (16%)
Query: 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCP---IQSGQTFTY 120
P + + R+ + + N+ +HWHG FD + P I G+++ Y
Sbjct: 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHG--------FDVNWHNDAHPSFAITPGESYNY 89
Query: 121 EFTMFQQKGTFFWHAHVSWLRGTVY----GAIVVYPKTGVPYPFQFPYQEHIIILGEYWL 176
F + + GT+ +H H L + +V+ +G F++ + +++
Sbjct: 90 SFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKYGVNDLPLVIS---- 145
Query: 177 QDVVQLERQVLASGGAPP--PSNAYTINGHPGPN--YNCSANDVYKIEVVPGKTYLLRLI 232
+R+ + GGAP P+ I G G N + V+K+ G +Y LRL+
Sbjct: 146 ------DRRFI--GGAPVYNPTPMEMIAGFLGNAVLVNGVKDAVFKLS---GGSYRLRLV 194
Query: 233 NAGLNMENFFAIANHK-----LTIVEADAEY-TKPFSTDRVMLGPGQTVNVLVTADQPIG 286
N +I + ++ D + +P + L P + V+V + G
Sbjct: 195 NGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE--G 252
Query: 287 KYSMAMGPY 295
Y + P+
Sbjct: 253 VYLLKNTPF 261
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 30 GRSTRFYEFKIQ--ATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNAT 87
G+ +YE +I+ +V + D+V + M PGP +V+ N + +
Sbjct: 33 GQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNS 92
Query: 88 IHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHV 137
+H HG R + FDG A P G Y + Q T ++H H
Sbjct: 93 VHLHGSFSRAA--FDGWAEDITEP---GSFKDYYYPNRQSARTLWYHDHA 137
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 16/76 (21%)
Query: 474 HPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFT-------AD 526
HPIH+H +F V+ +GN + +T PY + + V W R T A
Sbjct: 398 HPIHIHLVDFKVISRTSGN-NARTVM------PYESGLKDVV--WLGRRETVVVEAHYAP 448
Query: 527 NPGVWFMHCHFDIHQS 542
PGV+ HCH IH+
Sbjct: 449 FPGVYMFHCHNLIHED 464
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 113/309 (36%), Gaps = 44/309 (14%)
Query: 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
N GP V Q + V + NQ T+HWHG+ + DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--EVPGEVDGGP---QGIIPPGGK 96
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGT-----VYGAIVVYPKT--GVPYPFQFPYQEHIII 170
+ + Q T ++H H G + G +V+ + P Q+ + +I
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVI 156
Query: 171 LGEYWLQDVVQLERQV-LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLL 229
+ + Q++ Q+ + + + NG +Y P L
Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG-----------AIYPQHAAPRGWLRL 205
Query: 230 RLINAGLNME--NFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQ--- 283
RL+N G N NF N L ++ +D +P + + G+ VLV +
Sbjct: 206 RLLN-GCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 ------PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAV 337
P+ + MA+ P+ V I IA GA P++L+ LP + L V
Sbjct: 265 FDLVTLPVSQMGMAIAPFDKPHPV--MRIQPIA-ISASGALPDTLSSLPALPSL-EGLTV 320
Query: 338 KTV---MDG 343
+ + MDG
Sbjct: 321 RKLQLSMDG 329
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 27/153 (17%)
Query: 38 FKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRL 97
K+ A R+ + PGP++ E D + ++ N ++H HG+ +
Sbjct: 16 IKLYAERLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEI 75
Query: 98 SCWFDGPAYITQCPIQSGQTFTYEFTMF----QQKGTF------FWHAH---------VS 138
S DG ++ ++ G T TY + + GT+ +WH H
Sbjct: 76 SS--DGTKQ-SRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTG 132
Query: 139 WLRGTVYGAIVVYPKTGVPYPFQFPYQEHIIIL 171
+R +YG ++V K V P + H I+
Sbjct: 133 GIRNGLYGPVIVRRKGDV-----LPDRTHTIVF 160
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 11/105 (10%)
Query: 456 GTRVQIILQDTATVTTENHPIHLHGYNFY--VVGYGTGNYDPQTANFNLIDPPYMNTIGV 513
G RV+ ++ T H HLHG+ + G TG DP N I P ++ G
Sbjct: 181 GDRVEFVM---ITHGEYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGP-ADSFGF 236
Query: 514 PVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGEL 558
V I G W HCH H G+ + +VK G +
Sbjct: 237 QV-----IAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 276
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 109/530 (20%), Positives = 184/530 (34%), Gaps = 93/530 (17%)
Query: 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
N GP V Q + V + NQ T+HWHG+ + DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--EVPGEVDGGP---QGIIPPGGK 96
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGT-----VYGAIVVYPKT--GVPYPFQFPYQEHIII 170
+ + Q T ++H H G + G +V+ + P Q+ + +I
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVI 156
Query: 171 LGEYWLQDVVQLERQV-LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLL 229
+ + Q++ Q+ + + + NG +Y P L
Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG-----------AIYPQHAAPRGWLRL 205
Query: 230 RLINAGLNME--NFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQ--- 283
RL+N G N NF N L ++ +D +P + + G+ VLV +
Sbjct: 206 RLLN-GCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 ------PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAV 337
P+ + MA+ P+ V I IA GA P++L+ LP + L V
Sbjct: 265 FDLVTLPVSQMGMAIAPFDKPHPV--MRIQPIA-ISASGALPDTLSSLPALPSL-EGLTV 320
Query: 338 KTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISF 397
+ + S++P + +G+ + + G+ Q G+++ M M + +
Sbjct: 321 RKLQ---LSMDP----------MLDMMGMQMLMEKYGD--QAMAGMDHSQMMGHMGHGNM 365
Query: 398 IKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGT 457
N G F DF A N I MN + G
Sbjct: 366 NHMNHG----------GKF--DFHHA------------NKINGQAFDMNKPMFAAAK-GQ 400
Query: 458 RVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVG- 516
+ ++ + HP H+HG F ++ + N P A+ + +T+ V
Sbjct: 401 YERWVISGVGDMML--HPFHIHGTQFRIL---SENGKPPAAH----RAGWKDTVKVEGNV 451
Query: 517 GWAAIRFTADNPG--VWFMHCHFDIHQSWGLGTVLIVKNGKGELETLPHP 564
++F D P + HCH H+ G+ V G L HP
Sbjct: 452 SEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQGDHGLSAWSHP 501
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 15/78 (19%)
Query: 474 HPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFM 533
H +H HG++F G + D + G + + PG+W +
Sbjct: 994 HTVHFHGHSFQYKHRGVYSSD---------------VFDIFPGTYQTLEMFPRTPGIWLL 1038
Query: 534 HCHFDIHQSWGLGTVLIV 551
HCH H G+ T V
Sbjct: 1039 HCHVTDHIHAGMETTYTV 1056
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 15/78 (19%)
Query: 474 HPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFM 533
H +H HG++F G + D + G + + PG+W +
Sbjct: 975 HTVHFHGHSFQYKHRGVYSSD---------------VFDIFPGTYQTLEMFPRTPGIWLL 1019
Query: 534 HCHFDIHQSWGLGTVLIV 551
HCH H G+ T V
Sbjct: 1020 HCHVTDHIHAGMETTYTV 1037
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 109/530 (20%), Positives = 183/530 (34%), Gaps = 93/530 (17%)
Query: 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
N GP V Q + V + NQ T+HWHG+ + DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--EVPGEVDGGP---QGIIPPGGK 96
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGT-----VYGAIVVYPKT--GVPYPFQFPYQEHIII 170
+ + Q T ++H H G + G +V+ + P Q+ + +I
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVI 156
Query: 171 LGEYWLQDVVQLERQV-LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLL 229
+ + Q++ Q+ + + + NG +Y P L
Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG-----------AIYPQHAAPRGWLRL 205
Query: 230 RLINAGLNME--NFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQ--- 283
RL+N G N NF N L ++ +D +P + + G+ VLV +
Sbjct: 206 RLLN-GCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 ------PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAV 337
P+ + MA+ P+ V I IA GA P++L+ LP + L V
Sbjct: 265 FDLVTLPVSQMGMAIAPFDKPHPV--MRIQPIA-ISASGALPDTLSSLPALPSL-EGLTV 320
Query: 338 KTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISF 397
+ + S++P + +G+ + + G+ Q G+++ M M + +
Sbjct: 321 RKLQ---LSMDP----------MLDMMGMQMLMEKYGD--QAMAGMDHSQMMGHMGHGNM 365
Query: 398 IKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGT 457
N G F DF A N I MN + G
Sbjct: 366 NHMNHG----------GKF--DFHHA------------NKINGQAFDMNKPMFAAAK-GQ 400
Query: 458 RVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVG- 516
+ ++ + HP H+HG F ++ + N P A+ + +T+ V
Sbjct: 401 YERWVISGVGDMML--HPFHIHGTQFRIL---SENGKPPAAH----RAGWKDTVKVEGNV 451
Query: 517 GWAAIRFTADNPG--VWFMHCHFDIHQSWGLGTVLIVKNGKGELETLPHP 564
++F D P + HCH H G+ V G L HP
Sbjct: 452 SEVLVKFNHDAPKEHAYMAHCHLLEHDDTGMMLGFTVLQGDHGLSAWSHP 501
>pdb|3UHF|A Chain A, Crystal Structure Of Glutamate Racemase From Campylobacter
Jejuni Subsp. Jejuni
pdb|3UHF|B Chain B, Crystal Structure Of Glutamate Racemase From Campylobacter
Jejuni Subsp. Jejuni
pdb|3UHO|A Chain A, Crystal Structure Of Glutamate Racemase From Campylobacter
Jejuni Subsp. Jejuni
pdb|3UHO|B Chain B, Crystal Structure Of Glutamate Racemase From Campylobacter
Jejuni Subsp. Jejuni
pdb|3UHP|A Chain A, Crystal Structure Of Glutamate Racemase From Campylobacter
Jejuni Subsp. Jejuni
pdb|3UHP|B Chain B, Crystal Structure Of Glutamate Racemase From Campylobacter
Jejuni Subsp. Jejuni
Length = 274
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 29/168 (17%)
Query: 334 NLAVKTVMDGLRSLNPVPVPKEIDANLFVTIG----------LNVQKCRSGNPQQNCRGL 383
N A +D LR+ PV IDA + TI + K + + R L
Sbjct: 95 NTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQKRLL 154
Query: 384 NNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFY-------DFVNGAPN 436
+ G + P V +GIF DF ++ +++Y D + A
Sbjct: 155 SQGYTNINALATGLFVPMVE---------EGIFEGDFLQSAMEYYFKNITTPDALILACT 205
Query: 437 NIPNDTNSMN---GTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGY 481
+ P S++ G +TK++ G + L++ + +NH LH Y
Sbjct: 206 HFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENIDLKNHKAKLHFY 253
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 110/303 (36%), Gaps = 41/303 (13%)
Query: 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
N GP V Q + V + NQ T+HWHG+ + DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--EVPGEVDGGP---QGIIPPGGK 96
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGT-----VYGAIVVYPKT--GVPYPFQFPYQEHIII 170
+ + Q T ++H H G + G +V+ + P Q+ + +I
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVI 156
Query: 171 LGEYWLQDVVQLERQV-LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLL 229
+ + Q++ Q+ + + + NG +Y P L
Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG-----------AIYPQHAAPRGWLRL 205
Query: 230 RLINAGLNME--NFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQ--- 283
RL+N G N NF N L ++ +D +P + + G+ VLV +
Sbjct: 206 RLLN-GCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 ------PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAV 337
P+ + MA+ P+ V I IA GA P++L+ LP + L V
Sbjct: 265 FDLVTLPVSQMGMAIAPFDKPHPV--MRIQPIA-ISASGALPDTLSSLPALPSL-EGLTV 320
Query: 338 KTV 340
+ +
Sbjct: 321 RKL 323
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 110/303 (36%), Gaps = 41/303 (13%)
Query: 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
N GP V Q + V + NQ T+HWHG+ + DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--EVPGEVDGGP---QGIIPPGGK 96
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGT-----VYGAIVVYPKT--GVPYPFQFPYQEHIII 170
+ + Q T ++H H G + G +V+ + P Q+ + +I
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVI 156
Query: 171 LGEYWLQDVVQLERQV-LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLL 229
+ + Q++ Q+ + + + NG +Y P L
Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG-----------AIYPQHAAPRGWLRL 205
Query: 230 RLINAGLNME--NFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQ--- 283
RL+N G N NF N L ++ +D +P + + G+ VLV +
Sbjct: 206 RLLN-GCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 ------PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAV 337
P+ + MA+ P+ V I IA GA P++L+ LP + L V
Sbjct: 265 FDLVTLPVSQMGMAIAPFDKPHPV--MRIQPIA-ISASGALPDTLSSLPALPSL-EGLTV 320
Query: 338 KTV 340
+ +
Sbjct: 321 RKL 323
>pdb|1FA4|A Chain A, Elucidation Of The Paramagnetic Relaxation Of Heteronuclei
And Protons In Cu(Ii) Plastocyanin From Anabaena
Variabilis
pdb|1NIN|A Chain A, Plastocyanin From Anabaena Variabilis, Nmr, 20 Structures
pdb|1TU2|A Chain A, The Complex Of Nostoc Cytochrome F And Plastocyanin
Determin With Paramagnetic Nmr. Based On The Structures
Of Cytochrome F And Plastocyanin, 10 Structures
pdb|2CJ3|A Chain A, Crystal Structure Of Plastocyanin From A Cyanobacterium,
Anabaena Variabilis
pdb|2CJ3|B Chain B, Crystal Structure Of Plastocyanin From A Cyanobacterium,
Anabaena Variabilis
Length = 105
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 256 AEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSA 298
A+ K S ++++ PGQ+ + AD P G+Y+ P+ A
Sbjct: 53 ADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEPHRGA 95
>pdb|2GIM|A Chain A, 1.6 Angstrom Structure Of Plastocyanin From Anabaena
Variabilis
pdb|2GIM|C Chain C, 1.6 Angstrom Structure Of Plastocyanin From Anabaena
Variabilis
Length = 106
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 256 AEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSA 298
A+ K S ++++ PGQ+ + AD P G+Y+ P+ A
Sbjct: 54 ADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEPHRGA 96
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 37 EFKIQATRVNKLCNAKDIV-----TVNNMFPGPVVYAQEDDRIIVKVTNQS----PYNAT 87
+ +++ V K D V T + PG ++ +E D + V+ +N P+N
Sbjct: 38 KVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVD 97
Query: 88 IHWHGVRQRLSCW-FDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS----WLRG 142
H + + F P G+T T+ F Q G + +H V+ +
Sbjct: 98 FHAATGQGGGAAATFTAP----------GRTSTFSFKALQ-PGLYIYHCAVAPVGMHIAN 146
Query: 143 TVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQ 177
+YG I+V PK G+P +E I+ G+++ +
Sbjct: 147 GMYGLILVEPKEGLPK----VDKEFYIVQGDFYTK 177
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 110/303 (36%), Gaps = 41/303 (13%)
Query: 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
N GP V Q + V + NQ T+HWHG+ + DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--EVPGEVDGGP---QGIIPPGGK 96
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGT-----VYGAIVVYPKT--GVPYPFQFPYQEHIII 170
+ + Q T ++H H G + G +V+ + P Q+ + +I
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVI 156
Query: 171 LGEYWLQDVVQLERQV-LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLL 229
+ + Q++ Q+ + + + NG +Y P L
Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG-----------AIYPQHAAPRGWLRL 205
Query: 230 RLINAGLNME--NFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQ--- 283
RL+N G N NF N L ++ +D +P + + G+ VLV +
Sbjct: 206 RLLN-GCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 ------PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAV 337
P+ + MA+ P+ V I IA GA P++L+ LP + L V
Sbjct: 265 FDLVTLPVSQMGMAIAPFDKPHPV--MRIQPIA-ISASGALPDTLSSLPALPSL-EGLTV 320
Query: 338 KTV 340
+ +
Sbjct: 321 RKL 323
>pdb|1SDD|B Chain B, Crystal Structure Of Bovine Factor Vai
Length = 647
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 63 GPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCP--------IQS 114
GPV+ A+ DD I V+ N + ++H HG+ S +G Y P IQ
Sbjct: 68 GPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKSS--EGKTYEDDSPEWFKEDNAIQP 125
Query: 115 GQTFTY 120
+T+TY
Sbjct: 126 NKTYTY 131
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 110/303 (36%), Gaps = 41/303 (13%)
Query: 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
N GP V Q + V + NQ T+HWHG+ + DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--EVPGEVDGGP---QGIIPPGGK 96
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGT-----VYGAIVVYPKT--GVPYPFQFPYQEHIII 170
+ + Q T ++H H G + G +V+ + P Q+ + +I
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVI 156
Query: 171 LGEYWLQDVVQLERQV-LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLL 229
+ + Q++ Q+ + + + NG +Y P L
Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG-----------AIYPQHAAPRGWLRL 205
Query: 230 RLINAGLNME--NFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQ--- 283
RL+N G N NF N L ++ +D +P + + G+ VLV +
Sbjct: 206 RLLN-GCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 ------PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAV 337
P+ + MA+ P+ V I IA GA P++L+ LP + L V
Sbjct: 265 FDLVTLPVSQMGMAIAPFDKPHPV--MRIQPIA-ISASGALPDTLSSLPALPSL-EGLTV 320
Query: 338 KTV 340
+ +
Sbjct: 321 RKL 323
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 110/303 (36%), Gaps = 41/303 (13%)
Query: 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQT 117
N GP V Q + V + NQ T+HWHG+ + DG Q I G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--EVPGEVDGGP---QGIIPPGGK 96
Query: 118 FTYEFTMFQQKGTFFWHAHVSWLRGT-----VYGAIVVYPKT--GVPYPFQFPYQEHIII 170
+ + Q T ++H H G + G +V+ + P Q+ + +I
Sbjct: 97 RSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVI 156
Query: 171 LGEYWLQDVVQLERQV-LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLL 229
+ + Q++ Q+ + + + NG +Y P L
Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG-----------AIYPQHAAPRGWLRL 205
Query: 230 RLINAGLNME--NFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQ--- 283
RL+N G N NF N L ++ +D +P + + G+ VLV +
Sbjct: 206 RLLN-GCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 284 ------PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAV 337
P+ + MA+ P+ V I IA GA P++L+ LP + L V
Sbjct: 265 FDLVTLPVSQMGMAIAPFDKPHPV--MRIQPIA-ISASGALPDTLSSLPALPSL-EGLTV 320
Query: 338 KTV 340
+ +
Sbjct: 321 RKL 323
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 63 GPVVYAQEDDRIIVKVTNQS--PYNATIHWHGV-------RQRLSCWFDGPAYITQCPIQ 113
GP++Y + D +++ NQ+ PYN I+ HG+ +RL G ++ PI
Sbjct: 451 GPLLYGEVGDTLLIIFKNQASRPYN--IYPHGITDVRPLYSRRLP---KGVKHLKDFPIL 505
Query: 114 SGQTFTYEFTMFQQKG 129
G+ F Y++T+ + G
Sbjct: 506 PGEIFKYKWTVTVEDG 521
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 63 GPVVYAQEDDRIIVKVTNQS--PYNATIHWHGV-------RQRLSCWFDGPAYITQCPIQ 113
GP++Y + D +++ NQ+ PYN I+ HG+ +RL G ++ PI
Sbjct: 450 GPLLYGEVGDTLLIIFKNQASRPYN--IYPHGITDVRPLYSRRLP---KGVKHLKDFPIL 504
Query: 114 SGQTFTYEFTMFQQKG 129
G+ F Y++T+ + G
Sbjct: 505 PGEIFKYKWTVTVEDG 520
>pdb|1CR9|H Chain H, Crystal Structure Of The Anti-Prion Fab 3f4
pdb|1CU4|H Chain H, Crystal Structure Of The Anti-Prion Fab 3f4 In Complex
With Its Peptide Epitope
Length = 217
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 523 FTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGK 555
T+++ V++ C+ D+H WG GT L V + K
Sbjct: 86 LTSEDTAVYY--CNADLHDYWGQGTTLTVSSAK 116
>pdb|3BQV|A Chain A, Crystal Structure Of The Double Mutant D44a D45a
Plastocyanin From Phormidium Laminosum
Length = 105
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 219 IEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVL 278
+ V PG T ++ +N L N A + A E S ++M PG++ +
Sbjct: 21 VTVHPGDT--VKWVNNKLPPHNILFAAKQ---VPGASKELADKLSHSQLMFSPGESYEIT 75
Query: 279 VTADQPIGKYSMAMGPYMSA 298
++D P G Y+ P+ A
Sbjct: 76 FSSDFPAGTYTYYCAPHRGA 95
>pdb|1SDD|A Chain A, Crystal Structure Of Bovine Factor Vai
Length = 306
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 63 GPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQC-PIQS------- 114
GP +YA+ D + V N++ +IH G+ + S + +G +Y P++
Sbjct: 59 GPTLYAEVGDIMKVHFKNKAHKPLSIHAQGI--KYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 115 GQTFTYEFTMFQQKG 129
GQ +TYE+ + + G
Sbjct: 117 GQEYTYEWIISEHSG 131
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,948,886
Number of Sequences: 62578
Number of extensions: 850771
Number of successful extensions: 1949
Number of sequences better than 100.0: 66
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1733
Number of HSP's gapped (non-prelim): 141
length of query: 571
length of database: 14,973,337
effective HSP length: 104
effective length of query: 467
effective length of database: 8,465,225
effective search space: 3953260075
effective search space used: 3953260075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)