Query 039250
Match_columns 571
No_of_seqs 234 out of 1634
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 12:59:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039250.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039250hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.6E-98 6E-103 820.4 56.9 504 32-571 2-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 5.6E-96 2E-100 793.4 56.0 463 27-553 62-544 (580)
3 1zpu_A Iron transport multicop 100.0 1.5E-93 5.2E-98 775.4 49.3 463 32-554 1-482 (534)
4 3pxl_A Laccase; 4-copper prote 100.0 3.4E-93 1.2E-97 763.3 49.7 454 33-553 3-471 (499)
5 1v10_A Laccase; multicopper bl 100.0 1.6E-93 5.6E-98 774.4 45.0 471 31-571 21-508 (521)
6 3t6v_A Laccase; beta barrel, o 100.0 6.6E-93 2.2E-97 761.3 47.7 454 33-553 4-471 (495)
7 2q9o_A Laccase-1; multicopper 100.0 4.3E-91 1.5E-95 760.9 49.4 466 26-554 26-522 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 3.2E-90 1.1E-94 746.1 43.7 467 33-571 4-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 1.2E-83 4.1E-88 684.5 39.8 403 30-552 13-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.2E-82 4.1E-87 677.5 35.0 407 32-555 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 3.8E-81 1.3E-85 676.9 38.3 423 31-555 34-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 7.9E-80 2.7E-84 666.6 38.3 425 33-553 25-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 3.5E-79 1.2E-83 650.6 40.8 413 29-552 46-480 (481)
14 3gyr_A PHS, phenoxazinone synt 100.0 1.8E-78 6E-83 674.5 38.5 461 32-556 31-594 (612)
15 3aw5_A Multicopper oxidase; be 100.0 1.2E-78 4.2E-83 645.6 33.5 393 33-552 20-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 1.3E-77 4.5E-82 638.0 34.0 429 32-551 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 9.4E-76 3.2E-80 639.0 44.3 443 31-555 30-593 (612)
18 3g5w_A Multicopper oxidase typ 100.0 3.1E-53 1.1E-57 430.6 30.1 271 33-318 2-278 (318)
19 2r7e_A Coagulation factor VIII 100.0 1.2E-54 4.1E-59 485.1 11.8 239 37-297 50-316 (742)
20 2zwn_A Two-domain type laccase 100.0 1E-51 3.4E-56 424.1 32.4 272 32-318 2-279 (339)
21 2j5w_A Ceruloplasmin, ferroxid 100.0 3.7E-51 1.3E-55 475.1 35.7 449 31-556 19-564 (1065)
22 2dv6_A Nitrite reductase; elec 100.0 1.5E-48 5.1E-53 417.1 29.8 390 32-556 27-436 (447)
23 3gdc_A Multicopper oxidase; be 100.0 3.9E-47 1.3E-51 381.2 31.4 243 27-298 28-276 (288)
24 1kbv_A ANIA, major outer membr 100.0 1.7E-47 6E-52 390.7 29.3 261 30-318 35-309 (327)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 4.6E-46 1.6E-50 432.4 24.3 397 50-555 616-1060(1065)
26 3cg8_A Laccase; oxidoreductase 100.0 1.3E-44 4.3E-49 370.9 25.9 136 27-173 42-197 (343)
27 2zoo_A Probable nitrite reduct 100.0 6.3E-44 2.2E-48 380.4 28.8 262 30-319 25-300 (442)
28 3kw8_A Laccase, putative coppe 100.0 2.9E-44 1E-48 358.1 24.3 239 29-317 3-266 (276)
29 3tas_A Small laccase, multi-co 100.0 2.8E-44 9.6E-49 364.5 23.7 241 28-318 8-273 (313)
30 3t9w_A Small laccase, multi-co 100.0 9.8E-44 3.4E-48 357.6 24.7 240 29-317 25-288 (299)
31 1mzy_A Copper-containing nitri 100.0 5.7E-43 1.9E-47 359.0 29.8 265 29-318 28-320 (333)
32 1oe1_A Dissimilatory copper-co 100.0 6.6E-42 2.3E-46 351.6 28.9 268 30-319 29-321 (336)
33 2bw4_A Copper-containing nitri 100.0 1.3E-41 4.4E-46 350.1 29.2 268 30-319 35-327 (340)
34 1sdd_B Coagulation factor V; c 100.0 7.4E-40 2.5E-44 364.3 25.5 250 31-297 4-314 (647)
35 1sdd_A Coagulation factor V; c 100.0 1.4E-41 4.8E-46 343.8 8.8 216 52-297 49-287 (306)
36 2dv6_A Nitrite reductase; elec 100.0 3.5E-38 1.2E-42 336.8 31.7 259 31-318 161-435 (447)
37 2r7e_B Coagulation factor VIII 100.0 1E-39 3.4E-44 365.2 10.9 249 30-296 130-442 (770)
38 2r7e_A Coagulation factor VIII 100.0 1.9E-36 6.6E-41 338.3 6.2 219 59-298 447-699 (742)
39 3gdc_A Multicopper oxidase; be 100.0 6.7E-29 2.3E-33 248.7 19.3 234 196-552 54-287 (288)
40 2zwn_A Two-domain type laccase 100.0 2.1E-27 7.3E-32 243.3 20.5 247 196-554 23-278 (339)
41 3g5w_A Multicopper oxidase typ 100.0 1.6E-27 5.6E-32 241.6 18.2 249 197-555 23-278 (318)
42 3kw8_A Laccase, putative coppe 99.9 3.9E-27 1.3E-31 234.4 19.8 218 215-556 34-268 (276)
43 3t9w_A Small laccase, multi-co 99.9 4.7E-27 1.6E-31 236.1 18.9 217 215-555 56-289 (299)
44 3tas_A Small laccase, multi-co 99.9 3.4E-26 1.2E-30 231.6 21.1 217 215-555 40-273 (313)
45 1sdd_A Coagulation factor V; c 99.9 6.1E-25 2.1E-29 221.9 1.9 237 199-554 52-301 (306)
46 1sdd_B Coagulation factor V; c 99.9 5.4E-22 1.8E-26 220.6 20.1 241 215-553 67-327 (647)
47 2bw4_A Copper-containing nitri 99.9 4.1E-21 1.4E-25 197.1 23.0 93 449-555 231-326 (340)
48 1kbv_A ANIA, major outer membr 99.9 2.6E-21 8.9E-26 197.1 20.6 244 196-555 58-309 (327)
49 1mzy_A Copper-containing nitri 99.8 2.6E-19 9.1E-24 183.0 23.2 94 449-555 225-320 (333)
50 2r7e_B Coagulation factor VIII 99.8 5.3E-22 1.8E-26 222.1 2.6 88 449-552 368-455 (770)
51 1oe1_A Dissimilatory copper-co 99.8 3.3E-18 1.1E-22 175.2 23.5 278 196-569 53-335 (336)
52 2zoo_A Probable nitrite reduct 99.8 2.2E-18 7.5E-23 183.3 20.1 245 196-556 48-300 (442)
53 2uxt_A Protein SUFI, SUFI; oxi 99.8 5.3E-17 1.8E-21 172.3 25.5 238 33-316 152-441 (451)
54 2xu9_A Laccase; oxidoreductase 99.7 1.6E-16 5.3E-21 168.4 25.4 234 32-297 145-427 (439)
55 1hfu_A Laccase 1; oxidoreducta 99.7 6E-15 2E-19 158.8 25.6 242 35-297 143-457 (503)
56 1v10_A Laccase; multicopper bl 99.7 4.5E-15 1.6E-19 160.3 23.9 225 52-298 191-479 (521)
57 3zx1_A Oxidoreductase, putativ 99.7 8.2E-15 2.8E-19 155.8 23.9 244 34-297 181-468 (481)
58 1zpu_A Iron transport multicop 99.6 1.2E-13 4.1E-18 149.4 24.4 226 52-297 167-468 (534)
59 3t6v_A Laccase; beta barrel, o 99.6 2.5E-13 8.6E-18 145.2 25.8 244 51-297 167-458 (495)
60 3od3_A Blue copper oxidase CUE 99.6 7.1E-14 2.4E-18 148.5 20.7 252 34-297 151-477 (488)
61 1aoz_A Ascorbate oxidase; oxid 99.6 2E-13 6.7E-18 148.8 23.6 215 65-298 205-513 (552)
62 2g23_A PHS, phenoxazinone synt 99.6 6E-13 2E-17 145.0 26.4 234 51-298 253-579 (612)
63 3pxl_A Laccase; 4-copper prote 99.6 3.9E-13 1.3E-17 143.7 24.4 243 51-297 165-458 (499)
64 2q9o_A Laccase-1; multicopper 99.5 6.6E-13 2.3E-17 144.5 25.2 229 51-298 194-509 (559)
65 3cvb_A Plastocyanin; cupredoxi 99.5 2.6E-15 9E-20 126.4 4.4 90 59-152 14-105 (105)
66 3aw5_A Multicopper oxidase; be 99.5 2.8E-13 9.6E-18 143.5 20.7 230 34-297 138-436 (448)
67 2wsd_A Spore coat protein A; o 99.5 7E-13 2.4E-17 143.0 19.7 220 51-298 229-498 (513)
68 3abg_A Bilirubin oxidase; clea 99.5 1.3E-12 4.5E-17 141.0 18.7 246 35-316 173-475 (534)
69 1iby_A Nitrosocyanin; RED copp 99.4 6.7E-13 2.3E-17 112.9 11.4 104 35-152 3-112 (112)
70 2cal_A Rusticyanin; iron respi 99.3 7.7E-12 2.6E-16 112.2 10.8 99 48-151 46-154 (154)
71 3sqr_A Laccase; multicopper ox 99.3 1.3E-10 4.6E-15 125.8 22.3 241 51-297 224-531 (580)
72 3gyr_A PHS, phenoxazinone synt 99.3 1.9E-10 6.5E-15 127.2 20.7 234 50-297 252-578 (612)
73 3cg8_A Laccase; oxidoreductase 99.2 2.4E-11 8.3E-16 123.9 10.1 100 55-156 198-310 (343)
74 1fwx_A Nitrous oxide reductase 99.2 3.5E-11 1.2E-15 129.3 11.2 96 48-154 497-594 (595)
75 2ov0_A Amicyanin; beta-sandwic 99.1 1.7E-10 5.7E-15 96.7 10.2 79 58-151 27-105 (105)
76 2aan_A Auracyanin A; cupredoxi 99.1 1.7E-10 5.7E-15 102.0 9.0 95 449-552 35-139 (139)
77 3cvb_A Plastocyanin; cupredoxi 99.1 1.6E-10 5.6E-15 96.7 8.1 85 449-552 19-104 (105)
78 2gim_A Plastocyanin; beta shee 99.0 1.1E-09 3.9E-14 91.8 8.5 83 64-152 20-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 1.3E-08 4.6E-13 89.6 11.4 91 60-151 31-139 (139)
80 2gim_A Plastocyanin; beta shee 98.8 8.3E-09 2.8E-13 86.4 7.6 84 449-552 20-105 (106)
81 4hci_A Cupredoxin 1; structura 98.7 3.7E-08 1.3E-12 81.5 9.2 80 57-151 21-100 (100)
82 2plt_A Plastocyanin; electron 98.7 5.3E-08 1.8E-12 80.2 9.0 77 64-151 18-98 (98)
83 1qhq_A Protein (auracyanin); e 98.7 8E-08 2.7E-12 84.8 9.7 99 449-552 33-139 (140)
84 1pcs_A Plastocyanin; electron 98.6 9.8E-08 3.4E-12 78.5 8.3 80 64-151 19-98 (98)
85 1qhq_A Protein (auracyanin); e 98.6 1.8E-07 6.2E-12 82.5 9.7 92 60-152 29-140 (140)
86 2plt_A Plastocyanin; electron 98.6 1.9E-07 6.5E-12 76.8 8.5 81 449-552 18-98 (98)
87 1pcs_A Plastocyanin; electron 98.6 2.5E-07 8.5E-12 76.1 9.1 79 449-552 19-98 (98)
88 1b3i_A PETE protein, protein ( 98.5 1.6E-07 5.6E-12 77.0 7.0 77 64-151 19-97 (97)
89 1bxv_A Plastocyanin; copper pr 98.5 2.6E-07 9E-12 74.8 8.0 74 63-151 18-91 (91)
90 1kdj_A Plastocyanin; electron 98.5 2.5E-07 8.6E-12 76.7 7.9 74 64-151 17-102 (102)
91 1byp_A Protein (plastocyanin); 98.5 4.2E-07 1.5E-11 74.8 8.8 77 64-151 17-99 (99)
92 1plc_A Plastocyanin; electron 98.5 4.3E-07 1.5E-11 74.8 8.7 77 64-151 17-99 (99)
93 3erx_A Pseudoazurin; copper pr 98.5 4.9E-07 1.7E-11 77.3 8.7 75 64-153 21-95 (123)
94 1bxv_A Plastocyanin; copper pr 98.4 5.8E-07 2E-11 72.7 8.5 73 449-552 19-91 (91)
95 3tu6_A Pseudoazurin (blue copp 98.4 4.1E-07 1.4E-11 78.2 7.4 76 64-154 23-98 (127)
96 1b3i_A PETE protein, protein ( 98.4 5E-07 1.7E-11 74.1 6.6 79 449-552 19-97 (97)
97 1byp_A Protein (plastocyanin); 98.4 4E-07 1.4E-11 75.0 5.7 83 449-552 17-99 (99)
98 3ef4_A Pseudoazurin, blue copp 98.4 8.2E-07 2.8E-11 75.8 7.5 75 64-153 22-96 (124)
99 3c75_A Amicyanin; copper prote 98.3 2.4E-06 8.1E-11 74.3 10.2 79 58-151 54-132 (132)
100 1iby_A Nitrosocyanin; RED copp 98.3 2.8E-06 9.7E-11 71.6 10.0 74 449-552 38-111 (112)
101 4hci_A Cupredoxin 1; structura 98.3 3.6E-06 1.2E-10 69.3 9.0 73 449-552 28-100 (100)
102 1cuo_A Protein (azurin ISO-2); 98.2 2.8E-06 9.7E-11 73.2 8.3 93 60-152 14-129 (129)
103 1iuz_A Plastocyanin; electron 98.2 4.8E-06 1.6E-10 68.3 9.0 77 64-151 18-98 (98)
104 1kdj_A Plastocyanin; electron 98.2 1.7E-06 6E-11 71.5 6.0 85 449-552 17-102 (102)
105 3ay2_A Lipid modified azurin p 98.2 9E-06 3.1E-10 73.0 10.5 92 60-152 54-167 (167)
106 1paz_A Pseudoazurin precursor; 98.2 6E-06 2E-10 70.6 8.8 75 64-153 21-95 (123)
107 1pmy_A Pseudoazurin; electron 98.1 6E-06 2.1E-10 70.6 7.8 75 64-153 21-95 (123)
108 1id2_A Amicyanin; beta barrel, 98.1 1.7E-05 5.7E-10 66.1 10.2 79 58-151 28-106 (106)
109 1plc_A Plastocyanin; electron 98.1 4.6E-06 1.6E-10 68.6 6.1 83 449-552 17-99 (99)
110 2ccw_A Azurin II, AZN-2; elect 98.1 2.8E-05 9.7E-10 66.9 11.0 91 60-151 14-128 (129)
111 2iaa_C Azurin; quinoprotein, t 98.1 2.7E-05 9.1E-10 66.9 10.7 91 60-151 13-127 (128)
112 1nwp_A Azurin; electron transp 98.0 3E-05 1E-09 66.6 10.6 91 60-151 14-128 (128)
113 2ux6_A Pseudoazurin; type-1 co 98.0 2.2E-05 7.6E-10 67.0 8.6 73 64-153 21-93 (122)
114 2cal_A Rusticyanin; iron respi 97.9 6E-05 2.1E-09 67.1 10.3 84 449-551 61-153 (154)
115 1fwx_A Nitrous oxide reductase 97.8 6.9E-05 2.4E-09 80.6 11.2 78 449-554 513-593 (595)
116 3sbq_A Nitrous-oxide reductase 97.8 9E-05 3.1E-09 78.1 11.5 85 55-153 549-638 (638)
117 2ov0_A Amicyanin; beta-sandwic 97.8 6.7E-05 2.3E-09 62.2 8.1 72 449-551 33-104 (105)
118 3fsa_A Azurin; copper, cupredo 97.3 0.0021 7E-08 54.4 10.3 89 60-151 14-125 (125)
119 3ef4_A Pseudoazurin, blue copp 97.2 0.00066 2.3E-08 57.7 6.8 76 449-555 22-97 (124)
120 3tu6_A Pseudoazurin (blue copp 97.2 0.00054 1.9E-08 58.6 6.2 76 449-555 23-98 (127)
121 3erx_A Pseudoazurin; copper pr 97.1 0.00085 2.9E-08 57.1 6.9 75 449-554 21-95 (123)
122 1iuz_A Plastocyanin; electron 97.1 0.002 6.7E-08 52.4 8.3 81 449-552 18-98 (98)
123 1id2_A Amicyanin; beta barrel, 96.9 0.0027 9.3E-08 52.5 8.1 72 449-551 34-105 (106)
124 3c75_A Amicyanin; copper prote 96.8 0.0039 1.3E-07 53.8 8.1 73 449-552 60-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.3 0.02 6.8E-07 49.4 9.7 74 64-152 60-135 (135)
126 1paz_A Pseudoazurin precursor; 96.3 0.0071 2.4E-07 51.3 6.8 75 449-554 21-95 (123)
127 1pmy_A Pseudoazurin; electron 96.2 0.0072 2.5E-07 51.3 6.1 75 449-554 21-95 (123)
128 3sbq_A Nitrous-oxide reductase 96.1 0.026 9E-07 59.7 11.0 79 449-553 558-637 (638)
129 3s8f_B Cytochrome C oxidase su 95.9 0.045 1.5E-06 48.8 9.9 74 64-152 93-168 (168)
130 2cua_A Protein (CUA); CUA cent 95.3 0.08 2.7E-06 45.5 9.2 71 450-552 61-134 (135)
131 2ux6_A Pseudoazurin; type-1 co 95.2 0.028 9.5E-07 47.6 5.9 73 449-554 21-93 (122)
132 3ay2_A Lipid modified azurin p 94.8 0.053 1.8E-06 48.4 6.7 94 449-552 58-166 (167)
133 1cuo_A Protein (azurin ISO-2); 94.6 0.14 4.9E-06 43.6 8.7 94 449-552 18-128 (129)
134 3s8f_B Cytochrome C oxidase su 93.1 0.45 1.6E-05 42.3 9.4 73 450-552 94-167 (168)
135 2iaa_C Azurin; quinoprotein, t 92.4 0.35 1.2E-05 41.0 7.3 94 449-552 17-127 (128)
136 1nwp_A Azurin; electron transp 92.0 0.4 1.4E-05 40.7 7.2 95 449-551 18-127 (128)
137 2ccw_A Azurin II, AZN-2; elect 91.5 0.56 1.9E-05 39.8 7.6 94 449-552 18-128 (129)
138 3isy_A Bsupi, intracellular pr 81.5 9.1 0.00031 31.7 9.1 75 223-298 16-105 (120)
139 3fsa_A Azurin; copper, cupredo 79.8 1.9 6.5E-05 36.2 4.4 95 449-552 18-125 (125)
140 3isy_A Bsupi, intracellular pr 71.5 34 0.0012 28.2 9.9 72 56-138 26-102 (120)
141 3hb3_B Cytochrome C oxidase su 51.3 36 0.0012 32.9 7.5 77 449-555 189-266 (298)
142 1cyx_A CYOA; electron transpor 50.8 61 0.0021 29.4 8.4 63 217-298 41-103 (205)
143 2r39_A FIXG-related protein; s 50.0 38 0.0013 27.6 6.6 46 226-281 34-81 (118)
144 2f1e_A Protein APAG; APAG prot 49.2 16 0.00054 30.6 4.0 49 75-124 34-88 (127)
145 1xwv_A DER F II; beta sheets, 48.3 38 0.0013 28.2 6.3 60 64-124 25-92 (129)
146 1x9u_A Umecyanin; cupredoxin, 46.8 8.6 0.0003 31.7 2.0 85 66-161 28-114 (116)
147 1xvs_A Protein APAG; MCSG APC2 46.5 15 0.00053 30.6 3.5 22 102-124 66-87 (126)
148 2gsm_B Cytochrome C oxidase su 43.3 52 0.0018 31.2 7.2 76 449-554 171-247 (262)
149 1cyx_A CYOA; electron transpor 42.4 80 0.0027 28.6 7.8 74 449-552 41-115 (205)
150 1nep_A EPV20, BNPC2, epididyma 41.5 45 0.0015 27.8 5.8 62 64-125 26-95 (130)
151 1xq4_A Protein APAG; all beta 41.4 22 0.00076 30.2 3.8 44 75-121 38-89 (139)
152 2xzz_A Protein-glutamine gamma 41.2 33 0.0011 27.4 4.6 52 73-130 23-78 (102)
153 1tza_A APAG protein, SOR45; st 38.3 20 0.00069 30.2 3.0 22 102-124 66-87 (134)
154 1ws8_A Mavicyanin; oxidized fo 36.8 22 0.00074 28.9 2.9 80 67-157 29-109 (109)
155 1yew_A Particulate methane mon 31.9 77 0.0026 31.3 6.3 16 109-124 319-334 (382)
156 3hb3_B Cytochrome C oxidase su 30.7 1.6E+02 0.0054 28.4 8.4 63 217-298 189-251 (298)
157 2gsm_B Cytochrome C oxidase su 29.7 1.5E+02 0.0052 27.9 8.0 63 217-298 171-233 (262)
158 1v54_B Cytochrome C oxidase po 29.7 1.2E+02 0.0041 27.9 7.1 77 448-554 139-216 (227)
159 2c34_A ICP, inhibitor of cyste 28.7 1.6E+02 0.0054 23.9 6.9 67 63-130 14-88 (116)
160 3rfr_A PMOB; membrane, oxidore 25.5 1.2E+02 0.0042 30.2 6.5 53 73-128 301-369 (419)
161 2h7w_A Chagasin; beta-strands, 24.4 3E+02 0.01 22.8 8.0 29 62-90 31-59 (131)
162 3es6_B Prolactin-inducible pro 23.8 1.7E+02 0.0059 23.8 6.2 59 67-129 17-78 (118)
163 2cio_B Inhibitor of cysteine p 23.4 2.8E+02 0.0095 22.6 7.5 30 63-92 12-41 (121)
164 2x3c_A Toxic extracellular end 23.4 2.1E+02 0.0072 28.1 8.0 69 225-294 38-127 (343)
165 4ac7_B Urease subunit beta; hy 23.2 1.6E+02 0.0053 24.3 5.6 59 65-123 18-88 (126)
166 4ubp_B Protein (urease (chain 23.2 1.6E+02 0.0053 24.3 5.6 59 65-123 18-88 (126)
167 1xvs_A Protein APAG; MCSG APC2 23.1 62 0.0021 26.9 3.4 49 226-277 31-83 (126)
168 2f1e_A Protein APAG; APAG prot 22.9 72 0.0025 26.5 3.7 49 226-277 32-84 (127)
169 2p9r_A Alpha-2-M, alpha-2-macr 22.5 2.5E+02 0.0087 21.6 7.0 69 220-294 12-84 (102)
170 2wtp_A ORF131 protein, CZCE; m 22.4 42 0.0014 28.0 2.2 24 217-240 71-94 (131)
171 1tza_A APAG protein, SOR45; st 20.9 66 0.0023 27.1 3.1 48 226-276 31-82 (134)
172 2x3c_A Toxic extracellular end 20.2 2.4E+02 0.0081 27.7 7.6 15 110-124 95-109 (343)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.6e-98 Score=820.36 Aligned_cols=504 Identities=31% Similarity=0.572 Sum_probs=404.2
Q ss_pred ceEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-CCeeEEecccccCCCCCCCCCCccccC
Q 039250 32 STRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSP-YNATIHWHGVRQRLSCWFDGPAYITQC 110 (571)
Q Consensus 32 ~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~~q~ 110 (571)
++++|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+++ ++++|||||+++.+++||||+|+++||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 5899999999999999999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEeeccccccc-ceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHHHHHHHhhC
Q 039250 111 PIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRG-TVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQVLAS 189 (571)
Q Consensus 111 ~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~ 189 (571)
+|+||++|+|+|++ +++||||||||...++. ||+|+|||++++....++ .+|+|++|+++||++....++.......
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999999 99999999999987764 999999999987655555 3578999999999998877765443321
Q ss_pred C-CCCCCCCcEEEcCccCCCCCCC-------------CC-----CeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeE
Q 039250 190 G-GAPPPSNAYTINGHPGPNYNCS-------------AN-----DVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLT 250 (571)
Q Consensus 190 g-~~~~~~~~~~iNG~~~~~~~~~-------------~~-----~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~ 250 (571)
. .....++.++|||+.. ++|+ .. ..+.++|++|++|||||||+|..+.+.|+|+||+|+
T Consensus 160 ~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~ 237 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLL 237 (552)
T ss_dssp SCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEE
T ss_pred cccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEE
Confidence 1 1113578999999952 3332 11 234899999999999999999999999999999999
Q ss_pred EEEeCCCCCCeeEeceEEeCCCceEEEEEEe-CCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCC-CC--CCCC
Q 039250 251 IVEADAEYTKPFSTDRVMLGPGQTVNVLVTA-DQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPN-SL--ALPA 326 (571)
Q Consensus 251 via~DG~~~~P~~~d~l~l~pgeR~dv~v~~-~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-~~--~~p~ 326 (571)
|||+||.+++|+.++++.|+|||||||+|++ ++++|+|+|++.... +. .......|+|+|.+.... .+ ..|
T Consensus 238 vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~---~~~~~~~ail~y~~~~~~~~p~~~~p- 312 (552)
T 1aoz_A 238 VVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH---PNTPPGLTLLNYLPNSVSKLPTSPPP- 312 (552)
T ss_dssp EEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC---CCSCCEEEEEEETTSCTTSCCSSCCC-
T ss_pred EEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC---CCCccEEEEEEECCCCCCCCCCCCCC-
Confidence 9999999999999999999999999999999 456799999998764 21 123457899999886531 11 223
Q ss_pred CCCCCCCccchhhhcccCccCC---CCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChh
Q 039250 327 TLPRFNDNLAVKTVMDGLRSLN---PVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVS 403 (571)
Q Consensus 327 ~~p~~~~~~~~~~~~~~l~~l~---p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ 403 (571)
..|.+++......+ .++.+. +...+..+++++.+.+..+.. .+...|++||++|..|+.|
T Consensus 313 ~~p~~~~~~~~~~~--~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~~~w~iNg~s~~~p~~P 375 (552)
T 1aoz_A 313 QTPAWDDFDRSKNF--TYRITAAMGSPKPPVKFNRRIFLLNTQNVI---------------NGYVKWAINDVSLALPPTP 375 (552)
T ss_dssp CCCCTTCHHHHHHH--HTTCCBCTTCCCCCSSCSEEEEEEEEEEEE---------------TTEEEEEETTEEECCCSSC
T ss_pred CCCccccccccccc--cccccccCCCCCCCCCCcEEEEEEEeeccC---------------CCeEEEEECCCccCCCCCC
Confidence 34444443322211 133322 233456678888777654321 2245799999999999889
Q ss_pred HHhhhhhccCcccccCCCCCCc-cccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCC---CCCCCeeec
Q 039250 404 VLEAYYKKIDGIFTEDFPEAPL-KFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVT---TENHPIHLH 479 (571)
Q Consensus 404 ll~~~~~~~~g~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~---~~~HP~HlH 479 (571)
+|.+.+.++.|.+..+++..++ ..|+...... +...+.++.++.++.|++|+|+|+|.+... .+.||||||
T Consensus 376 ~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLH 450 (552)
T 1aoz_A 376 YLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPT-----NEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLH 450 (552)
T ss_dssp HHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCC-----CTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEET
T ss_pred HHHHHhhcCccccccCCCccccccccccccccc-----cccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEc
Confidence 9999888777877766654332 1233322100 112345667889999999999999976322 467999999
Q ss_pred CceEEEEEeccCCCCCC-CCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeCCCCCC
Q 039250 480 GYNFYVVGYGTGNYDPQ-TANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGEL 558 (571)
Q Consensus 480 G~~F~Vl~~~~g~~~~~-~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~ 558 (571)
||+||||++|.|.|++. ...+|+.+|+|||||.||++||++|||+|||||.|+|||||+||++.|||++|.|..
T Consensus 451 Gh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~----- 525 (552)
T 1aoz_A 451 GHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV----- 525 (552)
T ss_dssp TCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-----
T ss_pred CCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc-----
Confidence 99999999998988752 456788999999999999999999999999999999999999999999999998853
Q ss_pred CcCCCCCCCCCCC
Q 039250 559 ETLPHPPADFPRC 571 (571)
Q Consensus 559 ~~~~~~p~~~~~c 571 (571)
++++++|.++++|
T Consensus 526 ~~~~~~P~~~~~C 538 (552)
T 1aoz_A 526 EKVGRIPTKALAC 538 (552)
T ss_dssp GGCCCCCHHHHSS
T ss_pred hhhccCCcchhhh
Confidence 2577788889999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=5.6e-96 Score=793.41 Aligned_cols=463 Identities=28% Similarity=0.456 Sum_probs=374.8
Q ss_pred cCCCcceEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-CCeeEEecccccCCCCCCCCCC
Q 039250 27 WPRGRSTRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSP-YNATIHWHGVRQRLSCWFDGPA 105 (571)
Q Consensus 27 ~~~~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~ 105 (571)
++ .+++++|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+++ ++++|||||+++.+++||||+|
T Consensus 62 ~p-~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp 140 (580)
T 3sqr_A 62 TP-TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVP 140 (580)
T ss_dssp CC-CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCB
T ss_pred CC-CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCC
Confidence 44 578899999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred ccccCcCCCCCeEEEEEEeCCCCcceeEeeccccccc-ceeeEEEEecCCCCCCCCCCCCccE-EEEEeeEeeccHHHHH
Q 039250 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRG-TVYGAIVVYPKTGVPYPFQFPYQEH-IIILGEYWLQDVVQLE 183 (571)
Q Consensus 106 ~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~ 183 (571)
+++||+|+||++|+|+|++ .++||||||||...++. ||+|+|||+++.+. .+|.|. +|+++||+++...++.
T Consensus 141 ~vTq~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~ 214 (580)
T 3sqr_A 141 GVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIW 214 (580)
T ss_dssp TTTBCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHH
T ss_pred ccccCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHH
Confidence 9999999999999999999 79999999999988875 99999999987643 467887 9999999999988877
Q ss_pred HHHhhCCCCCCCCCcEEEcCccCCCCCCCC---------CCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEe
Q 039250 184 RQVLASGGAPPPSNAYTINGHPGPNYNCSA---------NDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEA 254 (571)
Q Consensus 184 ~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~---------~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~ 254 (571)
...... .+..++.++|||+. .+.|+. ...+.+++++|++|||||||+|....+.|+|+||+|+|||+
T Consensus 215 ~~~~~~--~~~~~d~~liNG~~--~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~ 290 (580)
T 3sqr_A 215 DTARLG--APPALENTLMNGTN--TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIAN 290 (580)
T ss_dssp HHHTTS--CCCCBSEEEETTBC--CCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEE
T ss_pred HHHhcc--CCCCCceEEECCcc--cCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEe
Confidence 665543 25678999999993 344432 24689999999999999999999999999999999999999
Q ss_pred CCCCCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCc
Q 039250 255 DAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDN 334 (571)
Q Consensus 255 DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~ 334 (571)
||.+++|+.+++|.|+|||||||+|++++++|+|||++.....|.. ........|||+|.++... .| ..+.+...
T Consensus 291 DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~-~~~~~~~~aiL~Y~~~~~~---~P-~~~~~~~~ 365 (580)
T 3sqr_A 291 DLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCST-NNEAANATGILRYDSSSIA---NP-TSVGTTPR 365 (580)
T ss_dssp TTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSC-BTTGGGCEEEEESSTTCCC---CC-CCCCCCCC
T ss_pred CCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCc-cCCCCceEEEEEECCCCCC---CC-CCCCCCcc
Confidence 9999999999999999999999999999888999999988765532 1223467999999876432 23 22222222
Q ss_pred c-chhhhcccCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecC-CChhHHhhhhhcc
Q 039250 335 L-AVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIK-PNVSVLEAYYKKI 412 (571)
Q Consensus 335 ~-~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p~~~ll~~~~~~~ 412 (571)
. +......+|.++.+...+...+.++.+.+. .+..+.|++||.+|.. ++.|+|.+.+.
T Consensus 366 ~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~------------------~~~~~~w~iN~~s~~~~~~~P~L~~~~~-- 425 (580)
T 3sqr_A 366 GTCEDEPVASLVPHLALDVGGYSLVDEQVSSA------------------FTNYFTWTINSSSLLLDWSSPTTLKIFN-- 425 (580)
T ss_dssp CCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEE------------------ESSSEEEEETTBCCCCCTTSCHHHHHHT--
T ss_pred chhhcccccccccCCCCCCCCccceEEEEEec------------------cCCceeEEECCEecccCCCCCchhhhhc--
Confidence 1 111111245554444444444444444331 1245689999999974 46676665542
Q ss_pred CcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEe----eCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEe
Q 039250 413 DGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVL----EFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGY 488 (571)
Q Consensus 413 ~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~ 488 (571)
|. .+++ ....++.+ +.|++|||+|+|.+. ..+.||||||||+||||++
T Consensus 426 -g~--~~~~------------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~-~~~~HP~HLHGh~F~vv~~ 477 (580)
T 3sqr_A 426 -NE--TIFP------------------------TEYNVVALEQTNANEEWVVYVIEDLTG-FGIWHPIHLHGHDFFIVAQ 477 (580)
T ss_dssp -TC--CCCC------------------------GGGCEEEECC----CCEEEEEEEECSS-SCCCEEEEESSCCEEEEEE
T ss_pred -CC--ccCC------------------------CCcceeecccccCCCcEEEEEEeCCCc-cccceeeEecCceEEEEec
Confidence 21 1121 11233344 469999999999752 1479999999999999999
Q ss_pred ccCCCCCC--CCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeC
Q 039250 489 GTGNYDPQ--TANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKN 553 (571)
Q Consensus 489 ~~g~~~~~--~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 553 (571)
|.|.|++. +..+|+.+|++|||+.|+++||++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 478 g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~ 544 (580)
T 3sqr_A 478 ETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ 544 (580)
T ss_dssp ESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESG
T ss_pred CCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECH
Confidence 99999864 467899999999999999999999999999999999999999999999999998854
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-93 Score=775.40 Aligned_cols=463 Identities=27% Similarity=0.400 Sum_probs=366.5
Q ss_pred ceEEEEEEEEEEEeecCC-ceeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-CCeeEEecccccCCCCCCCCCCcccc
Q 039250 32 STRFYEFKIQATRVNKLC-NAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSP-YNATIHWHGVRQRLSCWFDGPAYITQ 109 (571)
Q Consensus 32 ~~~~~~l~i~~~~~~~~g-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~~q 109 (571)
++++|+|+|++..+++|| .++.+|+|||++|||+||+++||+|+|+|+|+++ ++++|||||+++.+.+||||+|+++|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CcCCCCCeEEEEEEeCCCCcceeEeeccccccc-ceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHHHHHHHhh
Q 039250 110 CPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRG-TVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQVLA 188 (571)
Q Consensus 110 ~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 188 (571)
|+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++++ ++ .+|+|++|+++||+++...++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 999999999999999669999999999998864 9999999999864 22 568999999999999998877655432
Q ss_pred C---CCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEec
Q 039250 189 S---GGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTD 265 (571)
Q Consensus 189 ~---g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d 265 (571)
. .+....++.++|||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 22345689999999943 8999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCceEEEEEEeCCC-CceeEEEeecccccCC--CccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcc
Q 039250 266 RVMLGPGQTVNVLVTADQP-IGKYSMAMGPYMSAQG--VSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMD 342 (571)
Q Consensus 266 ~l~l~pgeR~dv~v~~~~~-~g~~~i~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~ 342 (571)
+|.|+|||||||+|++++. .|+|+|++.....+.. +........++|+|.+..... .+.....+.. +.. ..
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p--~~~~~~~~~~--~~~--~~ 300 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP--TQNYVDSIDN--FLD--DF 300 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC--CCCCCSCSSC--SCC--GG
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC--CCCccccccc--ccc--cc
Confidence 9999999999999999864 4789999876543211 112234578999998754221 1101111110 000 11
Q ss_pred cCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCC
Q 039250 343 GLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPE 422 (571)
Q Consensus 343 ~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~ 422 (571)
.++++.+...+..+++++.+.+.+... ..+...|.+||++|..|+.|+|.+.+.. |.+ ..
T Consensus 301 ~l~p~~~~~~~~~~~~~~~l~~~~~~~--------------~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~----~~ 360 (534)
T 1zpu_A 301 YLQPYEKEAIYGEPDHVITVDVVMDNL--------------KNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQ----AN 360 (534)
T ss_dssp GCCBSSCCCCCCSCSEEEEEEEEEEEC--------------TTSCEEEEETTBCCCCCSSCHHHHHTTS--GGG----TT
T ss_pred cceeCCCCCCCCCCCeEEEEEEEeecc--------------CCceeEEEECCCcccCCCCCceeeeccc--Ccc----cC
Confidence 244444333445677887777654321 1123468999999998887766554321 111 00
Q ss_pred CCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccC----------C
Q 039250 423 APLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTG----------N 492 (571)
Q Consensus 423 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g----------~ 492 (571)
. +.. ...++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+ .
T Consensus 361 ~-~~~----------------~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~ 420 (534)
T 1zpu_A 361 N-SEI----------------YGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHS 420 (534)
T ss_dssp C-GGG----------------GCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCC
T ss_pred C-Ccc----------------cCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccccCcccc
Confidence 0 110 122356788999999999999965 489999999999999999864 4
Q ss_pred CCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeCC
Q 039250 493 YDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNG 554 (571)
Q Consensus 493 ~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 554 (571)
|++........+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 421 ~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 482 (534)
T 1zpu_A 421 FDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF 482 (534)
T ss_dssp CBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred cCccccccccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc
Confidence 44321111246899999999999999999999999999999999999999999999988643
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=3.4e-93 Score=763.35 Aligned_cols=454 Identities=28% Similarity=0.488 Sum_probs=360.4
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-----CeeEEecccccCCCCCCCCCCcc
Q 039250 33 TRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPY-----NATIHWHGVRQRLSCWFDGPAYI 107 (571)
Q Consensus 33 ~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~ 107 (571)
...|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|++++ +++|||||+++..++||||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4679999999999999999999999999999999999999999999999985 79999999999999999999999
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEeecccccc-cceeeEEEEecCCCCC-CCCCCCCccEEEEEeeEeeccHHHHHHH
Q 039250 108 TQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLR-GTVYGAIVVYPKTGVP-YPFQFPYQEHIIILGEYWLQDVVQLERQ 185 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 185 (571)
+||+|+||++|+|+|++++++||||||||...++ +||+|+|||+++.+.. ..++..++|++|+++||+++....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999988899999999998876 4999999999875421 123223467899999999876432
Q ss_pred HhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEec
Q 039250 186 VLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTD 265 (571)
Q Consensus 186 ~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d 265 (571)
.+..+..+|+++|||+ ++.+.+.....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~-~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGK-GRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTB-CCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCC-CcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 2334457899999999 545544455778999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCc
Q 039250 266 RVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLR 345 (571)
Q Consensus 266 ~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~ 345 (571)
+|.|+|||||||+|++++++|+|+|++.....+.. +.+....|+|+|.++.... | ..+....... ....+|+
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~--~~~~~~~ail~Y~~~~~~~---p-~~~~~~~~~~--~~~~~L~ 306 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVG--FDGGINSAILRYDGAPAVE---P-TTNQTTSVKP--LNEVDLH 306 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS--CGGGTTEEEEEETTSCSSC---C-CCCCCCCSSB--CCGGGCC
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCccc--cCCCceEEEEEeCCCCCCC---C-CCCCCCCCcc--ccccccc
Confidence 99999999999999999888999999986544321 2223357999998865322 2 1111111111 1123455
Q ss_pred cCCCCC-----CCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCC
Q 039250 346 SLNPVP-----VPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDF 420 (571)
Q Consensus 346 ~l~p~~-----~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~ 420 (571)
++.+.. .+..+|+++.+.+.+. + ..|+|||++|..|+.|+|.+.+.+ ....
T Consensus 307 p~~~~~~p~~~~~~~~d~~~~l~~~~~-----------------~--~~w~iNg~s~~~~~~P~L~~~~~g---~~~~-- 362 (499)
T 3pxl_A 307 PLVSTPVPGAPSSGGVDKAINMAFNFN-----------------G--SNFFINGASFVPPTVPVLLQILSG---AQTA-- 362 (499)
T ss_dssp BSSCCCCSSCSSTTCSSEEEECCEEEC-----------------S--SCEEETTBCCCCCSSCHHHHHHTT---CCST--
T ss_pred ccccccCCCcccCCCCcEEEEEEEEec-----------------C--cEEEEcCEecCCCCCchhhhhhcC---Cccc--
Confidence 554321 2234666665554321 1 169999999998888776665422 1100
Q ss_pred CCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCC
Q 039250 421 PEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANF 500 (571)
Q Consensus 421 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~ 500 (571)
........++.++.|++|||+|+|.+....+.||||||||+||||+.+. ...+
T Consensus 363 ---------------------~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g------~~~~ 415 (499)
T 3pxl_A 363 ---------------------QDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG------STVY 415 (499)
T ss_dssp ---------------------TTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT------CCCC
T ss_pred ---------------------cccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC------Cccc
Confidence 0011234688999999999999953323458999999999999998742 2357
Q ss_pred CCCCCCcceeEEeCC---CcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeC
Q 039250 501 NLIDPPYMNTIGVPV---GGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKN 553 (571)
Q Consensus 501 ~~~~p~~rDTv~vpp---~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 553 (571)
|+.+|++|||+.||+ ++|++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 416 n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (499)
T 3pxl_A 416 NYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDT 471 (499)
T ss_dssp CSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESG
T ss_pred ccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEECh
Confidence 889999999999997 99999999999999999999999999999999996543
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.6e-93 Score=774.39 Aligned_cols=471 Identities=28% Similarity=0.452 Sum_probs=362.8
Q ss_pred cceEEEEEEEEEEEeecCCc-eeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-----CCeeEEecccccCCCCCCCCC
Q 039250 31 RSTRFYEFKIQATRVNKLCN-AKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSP-----YNATIHWHGVRQRLSCWFDGP 104 (571)
Q Consensus 31 ~~~~~~~l~i~~~~~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DG~ 104 (571)
+...+|+|+|++..+++||. ++.+|+|||++|||+||+++||+|+|+|+|+++ ++++|||||+++.+.+|+||+
T Consensus 21 ~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv 100 (521)
T 1v10_A 21 AATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGP 100 (521)
T ss_dssp -CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCC
T ss_pred ccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCC
Confidence 45778999999999999999 999999999999999999999999999999999 999999999999989999999
Q ss_pred CccccCcCCCCCeEEEEEEeCCCCcceeEeeccccccc-ceeeEEEEecCCCC-CCCCCCCCccEEEEEeeEeeccHHHH
Q 039250 105 AYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRG-TVYGAIVVYPKTGV-PYPFQFPYQEHIIILGEYWLQDVVQL 182 (571)
Q Consensus 105 ~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~ 182 (571)
++++||+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++.+. ..+++..++|++|+++||+++...++
T Consensus 101 ~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~ 180 (521)
T 1v10_A 101 AFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVL 180 (521)
T ss_dssp BTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC--
T ss_pred cceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHH
Confidence 99999999999999999997689999999999998865 99999999987542 22232234699999999999876554
Q ss_pred HHHHhhCCCCCCCCCcEEEcCccCCCCCCC--CCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCC
Q 039250 183 ERQVLASGGAPPPSNAYTINGHPGPNYNCS--ANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK 260 (571)
Q Consensus 183 ~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~--~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~ 260 (571)
.. ..+...+.+|.++|||+.. +.|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++
T Consensus 181 ~~---~~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 255 (521)
T 1v10_A 181 FP---NPNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQ 255 (521)
T ss_dssp --------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEE
T ss_pred hh---ccCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcccc
Confidence 32 1122345689999999942 4443 234589999999999999999999999999999999999999999999
Q ss_pred eeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhh
Q 039250 261 PFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTV 340 (571)
Q Consensus 261 P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~ 340 (571)
|+.++++.|+|||||||+|++++++|+|+|++.....+.. +......++|+|.+..... | ..+.. +..+. .
T Consensus 256 p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~--~~~~~~~ail~y~~~~~~~---p-~~~~~-~~~~~--~ 326 (521)
T 1v10_A 256 PLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNG--FTGGINSAIFRYQGAAVAE---P-TTSQN-SGTAL--N 326 (521)
T ss_dssp EEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS--CGGGTTEEEEEETTCCSCC---C-CCCCC-CSCBC--C
T ss_pred ceeeeeEEEcccceEEEEEEcCCCCCceeeeecccccccc--CCCCceeEEEEECCCCCCC---C-CCCCC-ccccc--c
Confidence 9999999999999999999999878999999987543221 2222246999998865432 2 11111 11110 0
Q ss_pred cccCccCCCCCCCc-----cCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcc
Q 039250 341 MDGLRSLNPVPVPK-----EIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGI 415 (571)
Q Consensus 341 ~~~l~~l~p~~~p~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~ 415 (571)
..++.++.+...|. ..+.++.+++.. .+....|+|||++|..+..|+|.+.+.+ .
T Consensus 327 ~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-----------------~~~~~~~~iNg~~~~~~~~P~l~~~~~g---~ 386 (521)
T 1v10_A 327 EANLIPLINPGAPGNPVPGGADINLNLRIGR-----------------NATTADFTINGAPFIPPTVPVLLQILSG---V 386 (521)
T ss_dssp GGGCCBSSCCCCSSCSSTTCSSEEEECCEEC-----------------CSSSSCCEESSCCCCCCSSCHHHHHHHT---C
T ss_pred hhhcccCCcccCCCcccCCcceEEEEEEEec-----------------CCceeEEEECCCcccCCCCchhhhhhcC---C
Confidence 12344443222221 334443332211 1222369999999998877776665422 1
Q ss_pred cccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCC
Q 039250 416 FTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDP 495 (571)
Q Consensus 416 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~ 495 (571)
.. +. ....++.++.++.|++|||+++| . +.||||||||+||||+++.+.
T Consensus 387 ~~-------~~----------------~~~~~~~~~~v~~g~~vei~l~N-~----~~HP~HLHGh~F~Vl~~~~~~--- 435 (521)
T 1v10_A 387 TN-------PN----------------DLLPGGAVISLPANQVIEISIPG-G----GNHPFHLHGHNFDVVRTPGSS--- 435 (521)
T ss_dssp CC-------GG----------------GSSSTTTEEEECTTCEEEEEEEC-C----BSCEEEESSCCEEEEECTTCS---
T ss_pred cc-------cc----------------cCCCCceEEEecCCCEEEEEEcC-C----CCCCEEEccceEEEEecCCCC---
Confidence 10 00 01224577899999999999999 3 799999999999999997542
Q ss_pred CCCCCCCCCCCcceeEEe-CCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeCCCCCCCcCCCCC-CCCCCC
Q 039250 496 QTANFNLIDPPYMNTIGV-PVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGELETLPHPP-ADFPRC 571 (571)
Q Consensus 496 ~~~~~~~~~p~~rDTv~v-pp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 571 (571)
.+++.+|.|||||.| |+++|++|||++||||.|+|||||++|++.|||++|.|.+.+ ..++.++| ...+.|
T Consensus 436 ---~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C 508 (521)
T 1v10_A 436 ---VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAISPAWDDLC 508 (521)
T ss_dssp ---CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCCCHHHHTHH
T ss_pred ---ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCCChHHhhhc
Confidence 357789999999999 899999999999999999999999999999999999986543 23344333 455666
No 6
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=6.6e-93 Score=761.31 Aligned_cols=454 Identities=27% Similarity=0.451 Sum_probs=357.8
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC-----CeeEEecccccCCCCCCCCCCcc
Q 039250 33 TRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPY-----NATIHWHGVRQRLSCWFDGPAYI 107 (571)
Q Consensus 33 ~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~ 107 (571)
...|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|++++ +++|||||+++.+++||||++++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4679999999999999999999999999999999999999999999999985 79999999999999999999999
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEeecccccc-cceeeEEEEecCCCCC-CCCCCCCccEEEEEeeEeeccHHHHHHH
Q 039250 108 TQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLR-GTVYGAIVVYPKTGVP-YPFQFPYQEHIIILGEYWLQDVVQLERQ 185 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 185 (571)
|||+|+||++|+|+|++++++||||||||...++ +||+|+|||+++.+.. .+++..++|++|+++||+++....+
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 9999999999999999988999999999998876 5999999999876432 1232235678999999998875321
Q ss_pred HhhCCCCCCCCCcEEEcCccCCCCCCC-CCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEe
Q 039250 186 VLASGGAPPPSNAYTINGHPGPNYNCS-ANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFST 264 (571)
Q Consensus 186 ~~~~g~~~~~~~~~~iNG~~~~~~~~~-~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 264 (571)
.+..+..+|+++|||+ ++.+.+. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+
T Consensus 161 ---~~~~p~~~d~~liNG~-g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 236 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGL-GRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236 (495)
T ss_dssp ---CSSSCCCCSEEEETTB-CCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCc-CcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEe
Confidence 2334457899999999 5333332 2457899999999999999999999999999999999999999999999999
Q ss_pred ceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccC
Q 039250 265 DRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGL 344 (571)
Q Consensus 265 d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l 344 (571)
++|.|+|||||||+|++++++|+|+|++.....+.. +.+....|+|+|.++....+..+ .+.. .... ....+|
T Consensus 237 ~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~--~~~~~~~ail~Y~~~~~~~p~~~--~~~~-~~~~--~~~~~L 309 (495)
T 3t6v_A 237 DEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEG--FDGGINSAILRYDGATTADPVTV--ASTV-HTKC--LIETDL 309 (495)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS--CGGGTTEEEEEETTSCSSCCCCC--CCSS-CSSB--CCGGGC
T ss_pred eeEEEcCceEEEEEEECCCCCceEEEEEecccCccc--cCCCceEEEEEECCCCCCCCCCC--CCCC-Cccc--cccccc
Confidence 999999999999999999888999999987544321 22223579999987643321111 1110 0001 112345
Q ss_pred ccCCCCC-----CCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccC
Q 039250 345 RSLNPVP-----VPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTED 419 (571)
Q Consensus 345 ~~l~p~~-----~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~ 419 (571)
.++.+.. .+..+|+++.+.+... + ..|+|||++|..|+.|+|.+.+. |.+..
T Consensus 310 ~p~~~~~~p~~~~~~~~d~~~~l~~~~~-----------------~--~~w~iNg~s~~~~~~P~L~~~~~---g~~~~- 366 (495)
T 3t6v_A 310 HPLSRNGVPGNPHQGGADCNLNLSLGFA-----------------C--GNFVINGVSFTPPTVPVLLQICS---GANTA- 366 (495)
T ss_dssp CBSSCCCCSSCSSTTCSSEEEECCEEEE-----------------T--TEEEETTBCCCCCSSCHHHHHHT---TCCSS-
T ss_pred cccccccCCCccCCCCCcEEEEEEEEec-----------------C--cEEEEcCEecCCCCCcchhhhhc---CCcCc-
Confidence 5554321 2234666665554321 1 16999999999888777665442 21100
Q ss_pred CCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCC
Q 039250 420 FPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTAN 499 (571)
Q Consensus 420 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~ 499 (571)
........++.++.|++|||+|+|. ...+.||||||||+|+||+++. ...
T Consensus 367 ----------------------~~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g------~~~ 416 (495)
T 3t6v_A 367 ----------------------ADLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS------NST 416 (495)
T ss_dssp ----------------------TTSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT------CCC
T ss_pred ----------------------ccccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC------CCC
Confidence 0011234688999999999999842 2358999999999999998753 235
Q ss_pred CCCCCCCcceeEEeCC-CcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeC
Q 039250 500 FNLIDPPYMNTIGVPV-GGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKN 553 (571)
Q Consensus 500 ~~~~~p~~rDTv~vpp-~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 553 (571)
+|+.+|.+||||.|++ |+|++|||++||||.|+|||||++|++.||+++|.+.+
T Consensus 417 ~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 417 SNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp CCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred cccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 7888999999999997 89999999999999999999999999999999997643
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=4.3e-91 Score=760.92 Aligned_cols=466 Identities=25% Similarity=0.421 Sum_probs=362.4
Q ss_pred ccCCCcceEEEEEEEEEEE--eecCCce-eeEEEECCcCCCceEEEecCCEEEEEEEeCC-CCCeeEEecccccCCCCCC
Q 039250 26 TWPRGRSTRFYEFKIQATR--VNKLCNA-KDIVTVNNMFPGPVVYAQEDDRIIVKVTNQS-PYNATIHWHGVRQRLSCWF 101 (571)
Q Consensus 26 ~~~~~~~~~~~~l~i~~~~--~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~ 101 (571)
.++..+++++|+|++++.. ++++|.+ +.+|+|||++|||+||+++||+|+|+|+|++ +++++|||||+++.+.+||
T Consensus 26 ~~p~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~ 105 (559)
T 2q9o_A 26 STPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLH 105 (559)
T ss_dssp CCCCCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGG
T ss_pred cCCCCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCc
Confidence 3455677899999999999 8899999 9999999999999999999999999999999 6899999999999988999
Q ss_pred CCCCccccCcCCC-CCeEEEEEEeCCCCcceeEeeccccccc-ceeeEEEEecCCCCCCCCCCCCccE-EEEEeeEeecc
Q 039250 102 DGPAYITQCPIQS-GQTFTYEFTMFQQKGTFFWHAHVSWLRG-TVYGAIVVYPKTGVPYPFQFPYQEH-IIILGEYWLQD 178 (571)
Q Consensus 102 DG~~~~~q~~i~P-G~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~ 178 (571)
||+|+++||+|+| |++|+|+|++ .++||||||||...+.. ||+|+|||++++.. .+|.|. +|+++||+++.
T Consensus 106 DG~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~ 179 (559)
T 2q9o_A 106 DGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRA 179 (559)
T ss_dssp SCCBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSC
T ss_pred CCCCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCC
Confidence 9999999999999 9999999999 78999999999987764 99999999987643 467787 99999999998
Q ss_pred HHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCC-CCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCC
Q 039250 179 VVQLERQVLASGGAPPPSNAYTINGHPGPNYNCS-ANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAE 257 (571)
Q Consensus 179 ~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~-~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~ 257 (571)
..++..... ++....++.++|||+... .|. .+..+.+++++|++|||||||+|..+.+.|+|+||+|+|||+||.
T Consensus 180 ~~~~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~ 255 (559)
T 2q9o_A 180 ADDLVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMV 255 (559)
T ss_dssp HHHHHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTE
T ss_pred HHHHhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCc
Confidence 877654332 233456899999999542 232 234689999999999999999999999999999999999999999
Q ss_pred CCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeec--ccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCC--C
Q 039250 258 YTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGP--YMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFN--D 333 (571)
Q Consensus 258 ~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~--~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~--~ 333 (571)
+++|+.++++.|+|||||||+|++++.+|+|+|++.. ...+.. .......++|+|.+.... .| ..+.+. +
T Consensus 256 ~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~--~~~~~~~ail~y~~~~~~---~P-~~~~~~~~~ 329 (559)
T 2q9o_A 256 PVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGG--SLNPHPAAIFHYAGAPGG---LP-TDEGTPPVD 329 (559)
T ss_dssp EEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCC--BSSSCCEEEEEETTSCCS---CC-CCCCCCCCC
T ss_pred ccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCC--CCCCceeEEEEECCCCCC---CC-CCCCCcCCC
Confidence 9999999999999999999999999878999999987 333321 222345899999876532 22 111111 1
Q ss_pred ccchhhhcccCccCCCCCCCcc-----CceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCC-ChhHHhh
Q 039250 334 NLAVKTVMDGLRSLNPVPVPKE-----IDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKP-NVSVLEA 407 (571)
Q Consensus 334 ~~~~~~~~~~l~~l~p~~~p~~-----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p-~~~ll~~ 407 (571)
..+... ..+.++.+...|.. .+.++.+.+... ......|+|||++|..+ ..|+|.+
T Consensus 330 ~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~iNg~s~~~~~~~P~L~~ 391 (559)
T 2q9o_A 330 HQCLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT----------------GTPLFVWKVNGSDINVDWGKPIIDY 391 (559)
T ss_dssp CTTCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS----------------SSSSCEEEETTBCCCCCTTSCHHHH
T ss_pred cccccc--cccccCCCCCCCCcccccceeEEEEEEeecC----------------CCceEEEEECCEecccCCCCCcHhH
Confidence 111100 22333322222211 123333332110 12345799999999754 4566665
Q ss_pred hhhccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEee-CCCEEEEEEeeCCC-CCCCCCCeeecCceEEE
Q 039250 408 YYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLE-FGTRVQIILQDTAT-VTTENHPIHLHGYNFYV 485 (571)
Q Consensus 408 ~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~v~~~l~N~~~-~~~~~HP~HlHG~~F~V 485 (571)
.+.+. .++ ..+..++.++ .+++++|+++|.+. ...+.||||||||+|||
T Consensus 392 ~~~g~-----~~~------------------------~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~V 442 (559)
T 2q9o_A 392 ILTGN-----TSY------------------------PVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLV 442 (559)
T ss_dssp HHHTC-----CCC------------------------CGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEE
T ss_pred hhcCC-----ccC------------------------CCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEE
Confidence 54321 011 1123455554 46788888888531 01479999999999999
Q ss_pred EEecc---------CCCCCC--CCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeCC
Q 039250 486 VGYGT---------GNYDPQ--TANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNG 554 (571)
Q Consensus 486 l~~~~---------g~~~~~--~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 554 (571)
|+++. |.|++. ...+++.+|+|||||.||+++|++|||++||||.|+|||||++|++.|||++|.|.+.
T Consensus 443 l~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 443 LGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp EEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred EecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 99987 777643 3467889999999999999999999999999999999999999999999999988643
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=3.2e-90 Score=746.11 Aligned_cols=467 Identities=27% Similarity=0.468 Sum_probs=358.7
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCC-----CCeeEEecccccCCCCCCCCCCcc
Q 039250 33 TRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSP-----YNATIHWHGVRQRLSCWFDGPAYI 107 (571)
Q Consensus 33 ~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~ 107 (571)
...|+|++++..+++||.++++|+|||++ ||+||+++||+|+|+|+|+++ ++++|||||+++.+.+||||+|++
T Consensus 4 ~~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~v 82 (503)
T 1hfu_A 4 NSVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGV 82 (503)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccc
Confidence 34799999999999999999999999999 999999999999999999999 999999999999988999999999
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEeeccccccc-ceeeEEEEecCCCC-CCCCCCCCccEEEEEeeEeeccHHHHHHH
Q 039250 108 TQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRG-TVYGAIVVYPKTGV-PYPFQFPYQEHIIILGEYWLQDVVQLERQ 185 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 185 (571)
+||+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++.+. ..+++..++|++|+++||+++...++.
T Consensus 83 tq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~-- 160 (503)
T 1hfu_A 83 NQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ-- 160 (503)
T ss_dssp TBCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC--
T ss_pred ccCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc--
Confidence 99999999999999997689999999999998865 99999999987542 222322346999999999998765421
Q ss_pred HhhCCCCCCCCCcEEEcCccCCCCCCC-CCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEe
Q 039250 186 VLASGGAPPPSNAYTINGHPGPNYNCS-ANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFST 264 (571)
Q Consensus 186 ~~~~g~~~~~~~~~~iNG~~~~~~~~~-~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 264 (571)
+ .+.++.++|||+. .|.|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+
T Consensus 161 ----~--~~~~d~~liNG~~--~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 161 ----G--AAQPDATLINGKG--RYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp ---------CCSEEEETTBC--CBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ----C--CCCCCEEEECccc--ccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 1 1457899999994 24553 2345899999999999999999999999999999999999999999999999
Q ss_pred ceEEeCCCceEEEEEEeCCCCceeEEEeecccccCC--CccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcc
Q 039250 265 DRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQG--VSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMD 342 (571)
Q Consensus 265 d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~ 342 (571)
+++.|+|||||||+|++++++|+|+|++.....+.. ..+......++|+|.+.....+..+ ..|..... . ..
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~-~~~~~~~l---~--~~ 306 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTS-ANPNPAQL---N--EA 306 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCC-CCSSCCBC---C--GG
T ss_pred CeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCC-CCCccCCC---c--cc
Confidence 999999999999999999878999999986532210 0011223469999987654321111 11111110 0 12
Q ss_pred cCccCCCCCCCc-----cCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccc
Q 039250 343 GLRSLNPVPVPK-----EIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFT 417 (571)
Q Consensus 343 ~l~~l~p~~~p~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~ 417 (571)
+|.++.+...|. ..+.++.+.+.. .+. .|+|||++|..+..|+|.+.+.+ ...
T Consensus 307 ~l~p~~~~~~p~~~~~~~~~~~~~l~~~~-----------------~~~--~~~iNg~~~~~~~~P~l~~~~~g---~~~ 364 (503)
T 1hfu_A 307 DLHALIDPAAPGIPTPGAADVNLRFQLGF-----------------SGG--RFTINGTAYESPSVPTLLQIMSG---AQS 364 (503)
T ss_dssp GCBBSSSCSCSSCSSTTCSSEEEECCEEE-----------------ETT--EEEETTBCCCCCSSCHHHHHHTT---CCS
T ss_pred cccccCccCCCCcccCCcceEEEEEEeec-----------------cCc--eEEECCCccCCCCCcchhhhhcC---Ccc
Confidence 344443222221 333333322211 111 69999999998877776665422 110
Q ss_pred cCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCC
Q 039250 418 EDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQT 497 (571)
Q Consensus 418 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~ 497 (571)
+. ....++.++.++.|++|||+++|.. +.+.||||||||+||||+++.+.
T Consensus 365 -------~~----------------~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~----- 414 (503)
T 1hfu_A 365 -------AN----------------DLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS----- 414 (503)
T ss_dssp -------GG----------------GSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC-----
T ss_pred -------cc----------------cCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC-----
Confidence 00 0123457889999999999999542 24799999999999999997542
Q ss_pred CCCCCCCCCcceeEEe-CCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeCCCCCCCcCCCCC-CCCCCC
Q 039250 498 ANFNLIDPPYMNTIGV-PVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGELETLPHPP-ADFPRC 571 (571)
Q Consensus 498 ~~~~~~~p~~rDTv~v-pp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 571 (571)
.+++.+|.|||||.| |+++|++|||++||||.|+|||||++|++.|||++|.|.+.+ ..++.++| ...+.|
T Consensus 415 -~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 415 -TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLC 487 (503)
T ss_dssp -CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHHH
T ss_pred -ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhhc
Confidence 356789999999999 999999999999999999999999999999999999986443 23344334 345555
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.2e-83 Score=684.46 Aligned_cols=403 Identities=22% Similarity=0.337 Sum_probs=320.7
Q ss_pred CcceEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCcccc
Q 039250 30 GRSTRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQ 109 (571)
Q Consensus 30 ~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q 109 (571)
.+..++|+|++++..++++|.++.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++.+ ++||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 35678999999999999999999999999999999999999999999999999999999999999876 689987
Q ss_pred CcCCCCCeEEEEEEeC-CCCcceeEeecccc----c-ccceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHH--
Q 039250 110 CPIQSGQTFTYEFTMF-QQKGTFFWHAHVSW----L-RGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQ-- 181 (571)
Q Consensus 110 ~~i~PG~~~~y~~~~~-~~~Gt~wYH~H~~~----~-~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 181 (571)
+.|+||++|+|+|+++ +++||||||||.++ + .+||+|+|||+++.+..... .+++|++|+++||+++....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~-~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPEL-REAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHH-HTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccC-CCCCcEEEEEEeeeeCCCCcCC
Confidence 5699999999999985 48999999999975 2 24999999999875421111 35789999999999875200
Q ss_pred --HHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCC
Q 039250 182 --LERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYT 259 (571)
Q Consensus 182 --~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~ 259 (571)
.... . .| ..++.++|||+.. |.++|++| +|||||+|+|+++.+.|+|+||+|+||++||.++
T Consensus 166 ~~~~~~-~-~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 229 (439)
T 2xu9_A 166 HTPMDW-M-NG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFL 229 (439)
T ss_dssp CCHHHH-H-HC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred CCcccc-c-cC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCC
Confidence 0000 0 11 2468999999954 89999999 9999999999999999999999999999999998
Q ss_pred -CeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCC-------------ccCCcceEEEEEEcCCCCCCCCCC
Q 039250 260 -KPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGV-------------SFQNISAIAYFQYLGAQPNSLALP 325 (571)
Q Consensus 260 -~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~-------------~~~~~~~~ail~y~~~~~~~~~~p 325 (571)
+|+.++++.|+|||||||+|++++ +|+|++++.....+... ........++++|.+..... .+|
T Consensus 230 ~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~p 307 (439)
T 2xu9_A 230 EEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPL-PLP 307 (439)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCC-CCC
T ss_pred CCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccc-cCc
Confidence 899999999999999999999997 79999999865433210 00122467889998754211 122
Q ss_pred CCCCCCCCccchhhhcccCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHH
Q 039250 326 ATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVL 405 (571)
Q Consensus 326 ~~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll 405 (571)
.. +.++.+...+ ..++++.+.+... + ..|.+||++|..+.
T Consensus 308 ----~~------------l~~~~~l~~~-~~~r~~~l~~~~~-----------------g--~~~~iNg~~~~~~~---- 347 (439)
T 2xu9_A 308 ----KA------------LSPFPTLPAP-VVTRRLVLTEDMM-----------------A--ARFFINGQVFDHRR---- 347 (439)
T ss_dssp ----SC------------CCCCCCCCCC-SEEEEEEEEEEGG-----------------G--TEEEETTBCCCTTC----
T ss_pred ----cc------------CCCcccCCCC-CcceEEEEEeecc-----------------C--ceEeECCEECCCCC----
Confidence 10 1111111111 1235555544320 0 26899998874221
Q ss_pred hhhhhccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEE
Q 039250 406 EAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYV 485 (571)
Q Consensus 406 ~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~V 485 (571)
....++.|++++|+++|.+ .+.||||||||+|||
T Consensus 348 -------------------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~V 381 (439)
T 2xu9_A 348 -------------------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQV 381 (439)
T ss_dssp -------------------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCCBEE
T ss_pred -------------------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEE
Confidence 1246789999999999975 489999999999999
Q ss_pred EEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEe
Q 039250 486 VGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 486 l~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|+++.+.+ .+|.|||||.|+|+++++|||++||||.|+|||||++|||.|||+.|+|.
T Consensus 382 l~~~g~~~---------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 382 LSVGGRPF---------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EEETTEEC---------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EeeCCCCC---------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99975543 36899999999999999999999999999999999999999999999883
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.2e-82 Score=677.48 Aligned_cols=407 Identities=15% Similarity=0.169 Sum_probs=317.4
Q ss_pred ceEEEEEEEEEEEeec-CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccC
Q 039250 32 STRFYEFKIQATRVNK-LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQC 110 (571)
Q Consensus 32 ~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~ 110 (571)
.+++|+|++++..+++ +|.++.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++.+. |||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999998 799999999999999999999999999999999999999999999999987 69998 89
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEeecccccc-----cceeeEEEEecCCCCCCCCCC--CCccEEEEEeeEeeccHHHHH
Q 039250 111 PIQSGQTFTYEFTMFQQKGTFFWHAHVSWLR-----GTVYGAIVVYPKTGVPYPFQF--PYQEHIIILGEYWLQDVVQLE 183 (571)
Q Consensus 111 ~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 183 (571)
+|+||++|+|+|++++++||||||||.++.+ +||+|+|||+++++...+++. .++|++|+++||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 9999999999999955699999999996542 599999999987654443433 478999999999987643321
Q ss_pred HHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEE-cCceeEEEEeCCCCC-Ce
Q 039250 184 RQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAI-ANHKLTIVEADAEYT-KP 261 (571)
Q Consensus 184 ~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~P 261 (571)
+...+.....++.++|||+.. |.+++++| +|||||+|+|+.+.+.|+| +||+|+||++||.++ +|
T Consensus 172 --~~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 --YNEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp --CCCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred --cccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 111222345689999999954 88999999 9999999999999999999 899999999999998 89
Q ss_pred eEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCC------ccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCcc
Q 039250 262 FSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGV------SFQNISAIAYFQYLGAQPNSLALPATLPRFNDNL 335 (571)
Q Consensus 262 ~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~------~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~ 335 (571)
+.++++.|+|||||||+|++++ +|.|++++.....+... ........++++|.......+... .+|.
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~-~~p~----- 311 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD-SLPM----- 311 (451)
T ss_dssp EEESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS-----
T ss_pred eEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccc-cCcc-----
Confidence 9999999999999999999986 58999998765432110 011123457888876532211000 1111
Q ss_pred chhhhcccCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcc
Q 039250 336 AVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGI 415 (571)
Q Consensus 336 ~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~ 415 (571)
.|.++.+. +...+.+..+.++ + .|+|||++|..++
T Consensus 312 -------~L~~~~~~--~~~~~~~~~~~l~-------------------~---~~~iNg~~f~~~~-------------- 346 (451)
T 2uxt_A 312 -------RLLPTEIM--AGSPIRSRDISLG-------------------D---DPGINGQLWDVNR-------------- 346 (451)
T ss_dssp -------CSSSSCCC--CCCCSEEEEEEEC-------------------S---SSSBTTBCCCTTC--------------
T ss_pred -------ccCCCCCC--CCCCcceEEEEEe-------------------e---EEEECCEeCCCCC--------------
Confidence 12222211 1122222222221 1 4889998774221
Q ss_pred cccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCC
Q 039250 416 FTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDP 495 (571)
Q Consensus 416 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~ 495 (571)
..+.++.|++++|+|+|. +.||||||||+||||+++..
T Consensus 347 ---------------------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~---- 384 (451)
T 2uxt_A 347 ---------------------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA---- 384 (451)
T ss_dssp ---------------------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB----
T ss_pred ---------------------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc----
Confidence 235678999999999995 58999999999999999632
Q ss_pred CCCCCCCCCCCcceeEEeCCCcEEEEEEEecCcee----eEEeeechhhhhcccEEEEEEeCCC
Q 039250 496 QTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGV----WFMHCHFDIHQSWGLGTVLIVKNGK 555 (571)
Q Consensus 496 ~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~----w~~HCHil~H~d~GM~~~~~V~~~~ 555 (571)
.+++.+|.|||||.| +++++|+|++||||. |+|||||++|||.|||+.|+|.+.+
T Consensus 385 ---~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 385 ---MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp ---CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred ---CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 245568999999999 999999999999988 9999999999999999999998654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=3.8e-81 Score=676.92 Aligned_cols=423 Identities=17% Similarity=0.214 Sum_probs=320.3
Q ss_pred cceEEEEEEEEEEE--eecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccc
Q 039250 31 RSTRFYEFKIQATR--VNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYIT 108 (571)
Q Consensus 31 ~~~~~~~l~i~~~~--~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 108 (571)
..+++|+|++++.. +.++|.++.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++.+ ++||++
T Consensus 34 ~~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--- 108 (534)
T 3abg_A 34 QEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--- 108 (534)
T ss_dssp SCCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS---
T ss_pred CceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC---
Confidence 34688999999654 66789999999999999999999999999999999999999999999999886 479986
Q ss_pred cCcCCCCCeEEEEEEeCCCCcceeEeecccccc-----cceeeEEEEecCCCCCCCCCC--CCccEEEEEeeEeeccHHH
Q 039250 109 QCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLR-----GTVYGAIVVYPKTGVPYPFQF--PYQEHIIILGEYWLQDVVQ 181 (571)
Q Consensus 109 q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~ 181 (571)
||+|+||++|+|+|++++++||||||||.++++ +||+|+|||+++++...+++. .++|++|+++||+++...+
T Consensus 109 ~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~ 188 (534)
T 3abg_A 109 EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGN 188 (534)
T ss_dssp SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSC
T ss_pred CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCc
Confidence 799999999999999966689999999998753 499999999998876665554 3678999999998875433
Q ss_pred HHHHHhhCC-CCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcC-------ceeEEEE
Q 039250 182 LERQVLASG-GAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIAN-------HKLTIVE 253 (571)
Q Consensus 182 ~~~~~~~~g-~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~g-------h~~~via 253 (571)
+.. ..+ .....+|.++|||+.+ |.+++++ ++|||||||+|+++.+.|+|++ |+|+|||
T Consensus 189 ~~~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 189 LVT---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp BCC---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred eec---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 211 111 1234578999999965 7788998 5999999999999999999987 9999999
Q ss_pred eCCCCC-CeeEeceEEeCCCceEEEEEEeCCCCc-eeEEEeecccc-cCCCccCCcceEEEEEEcCCCCCCCCCCCCCCC
Q 039250 254 ADAEYT-KPFSTDRVMLGPGQTVNVLVTADQPIG-KYSMAMGPYMS-AQGVSFQNISAIAYFQYLGAQPNSLALPATLPR 330 (571)
Q Consensus 254 ~DG~~~-~P~~~d~l~l~pgeR~dv~v~~~~~~g-~~~i~~~~~~~-~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~ 330 (571)
+||+++ +|+.+++|.|+|||||||+|++++.+| +|+|++..... +...........++++|..........+...|
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P- 333 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP- 333 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC-
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc-
Confidence 999865 899999999999999999999998667 69999754221 11101111234578888754321000000111
Q ss_pred CCCccchhhhcccCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhh
Q 039250 331 FNDNLAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYK 410 (571)
Q Consensus 331 ~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~ 410 (571)
..|.++.....+...++++.+ .. . ...|+|||++|..+..+
T Consensus 334 -----------~~L~~~~~p~~~~~~~~~~~~--~~-----------------~--~~~w~iNG~~f~~~~~p------- 374 (534)
T 3abg_A 334 -----------ANLRDVPFPSPTTNTPRQFRF--GR-----------------T--GPTWTINGVAFADVQNR------- 374 (534)
T ss_dssp -----------CCCCCCSCCCCCCCCCEEEEC--SC-----------------C--CSTTCCCCBTTBCTTSC-------
T ss_pred -----------cccccCCCCCCccccceEEEE--ec-----------------c--CceeEECCcccCCCCCc-------
Confidence 112222111111223333322 11 0 12589999887433110
Q ss_pred ccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEecc
Q 039250 411 KIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGT 490 (571)
Q Consensus 411 ~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~ 490 (571)
....++.|++++|+|+|.+. .+.||||||||+||||+++.
T Consensus 375 --------------------------------------~l~~v~~G~~~~w~i~N~~~--~~~HP~HLHG~~F~Vl~~~~ 414 (534)
T 3abg_A 375 --------------------------------------LLANVPVGTVERWELINAGN--GWTHPIHIHLVDFKVISRTS 414 (534)
T ss_dssp --------------------------------------CCCEECTTCEEEEEEEECSS--SCCCCEEESSCCEEEEEESS
T ss_pred --------------------------------------ceeeccCCCEEEEEEEcCCC--CCCcCEEECCeeEEEEEEcC
Confidence 11246789999999999642 36999999999999999965
Q ss_pred CCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEE-ecCceeeEEeeechhhhhcccEEEEEEeCCC
Q 039250 491 GNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFT-ADNPGVWFMHCHFDIHQSWGLGTVLIVKNGK 555 (571)
Q Consensus 491 g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 555 (571)
|.+.. ..+++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|+|.|||+.|.|...+
T Consensus 415 g~~~~--~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 415 GNNAR--TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CCSSS--CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CCCcC--cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 54321 1234455 8999999999999999998 8999999999999999999999999998765
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=7.9e-80 Score=666.61 Aligned_cols=425 Identities=18% Similarity=0.243 Sum_probs=315.1
Q ss_pred eEEEEEEEEEEEeec--CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCC----------------------CeeE
Q 039250 33 TRFYEFKIQATRVNK--LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPY----------------------NATI 88 (571)
Q Consensus 33 ~~~~~l~i~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~----------------------~~~i 88 (571)
..+|+|++++....+ ++..+.+|+|||++|||+|||++||+|+|+|+|+|++ +|+|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 456999999988665 4579999999999999999999999999999999975 9999
Q ss_pred EecccccCCCCCCCCCCc--cccCcCCCCCeE---EEEEEeCCCCcceeEeeccccc-----ccceeeEEEEecCCCCCC
Q 039250 89 HWHGVRQRLSCWFDGPAY--ITQCPIQSGQTF---TYEFTMFQQKGTFFWHAHVSWL-----RGTVYGAIVVYPKTGVPY 158 (571)
Q Consensus 89 H~HG~~~~~~~~~DG~~~--~~q~~i~PG~~~---~y~~~~~~~~Gt~wYH~H~~~~-----~~Gl~G~liV~~~~~~~~ 158 (571)
||||+++.+ ++||+|+ ++||+|+||++| +|+|++++++||||||||.++. .+||+|+|||+++.+...
T Consensus 105 HwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 999999985 4699995 789999999555 9999986689999999999863 249999999999877666
Q ss_pred CCCCCCccEEEEEeeEeeccHHHHHHHHhh----------CCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEE
Q 039250 159 PFQFPYQEHIIILGEYWLQDVVQLERQVLA----------SGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYL 228 (571)
Q Consensus 159 ~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~----------~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~r 228 (571)
+++.+++|++|+++||+++...++...... .......+++++|||+.+ |.+++++| +||
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~R 251 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KYR 251 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EEE
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EEE
Confidence 666788999999999998764332110000 001234678999999954 78999985 899
Q ss_pred EEEeecCccceEEEEEcCc-eeEEEEeCCCCC-CeeEeceEEeCCCceEEEEEEeCCCCcee-EEEeecccccCCCccCC
Q 039250 229 LRLINAGLNMENFFAIANH-KLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQPIGKY-SMAMGPYMSAQGVSFQN 305 (571)
Q Consensus 229 lRliNa~~~~~~~~~i~gh-~~~via~DG~~~-~P~~~d~l~l~pgeR~dv~v~~~~~~g~~-~i~~~~~~~~~~~~~~~ 305 (571)
|||||+|+.+.+.|+|+|| +|+|||+||.++ +|+.++++.|+|||||||+|++++.+|++ .+.... .+.. ....
T Consensus 252 lRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~--~~~~-~~~~ 328 (513)
T 2wsd_A 252 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSA--GCGG-DVNP 328 (513)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECC--CSSS-SCCT
T ss_pred EEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecc--cccc-cCCC
Confidence 9999999999999999999 999999999998 89999999999999999999999866763 333322 1211 1111
Q ss_pred cceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCC-CCccCceEEEEEEeccccccCCCCCCCcccCCC
Q 039250 306 ISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVP-VPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLN 384 (571)
Q Consensus 306 ~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~-~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (571)
....++++|..........+..+|.. +..+.... .+...++++.+..... .
T Consensus 329 ~~~~~il~~~~~~~~~~~~~~~~p~~------------l~~~~~~~~~~~~~~~~~~l~~~~~----------------~ 380 (513)
T 2wsd_A 329 ETDANIMQFRVTKPLAQKDESRKPKY------------LASYPSVQHERIQNIRTLKLAGTQD----------------E 380 (513)
T ss_dssp TTTTEEEEEECCSCCSSCCCCCCCSB------------CSCCGGGCCCCEEEEEEEEEEEEEC----------------T
T ss_pred CCCcceEEEEeccCcccCccCCCCcc------------ccCCCCcccCCCcceEEEEEEeecC----------------C
Confidence 23357888876532110001011210 11100000 1112334444333221 1
Q ss_pred CceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEe
Q 039250 385 NGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQ 464 (571)
Q Consensus 385 ~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~ 464 (571)
.+...|.+||++|..+ ..+.++.|++++|+|+
T Consensus 381 ~g~~~~~iNg~~~~~~------------------------------------------------~~~~~~~g~~~~w~l~ 412 (513)
T 2wsd_A 381 YGRPVLLLNNKRWHDP------------------------------------------------VTETPKVGTTEIWSII 412 (513)
T ss_dssp TSCEEEEETTBCTTSC------------------------------------------------CCBCCBTTCEEEEEEE
T ss_pred CCCceEeECCccCCCc------------------------------------------------ccEecCCCCEEEEEEE
Confidence 1234688999876422 0123567999999999
Q ss_pred eCCCCCCCCCCeeecCceEEEEEeccC---CCCCCCCCCC---------CCCCCcceeEEeCCCcEEEEEEEe-cCceee
Q 039250 465 DTATVTTENHPIHLHGYNFYVVGYGTG---NYDPQTANFN---------LIDPPYMNTIGVPVGGWAAIRFTA-DNPGVW 531 (571)
Q Consensus 465 N~~~~~~~~HP~HlHG~~F~Vl~~~~g---~~~~~~~~~~---------~~~p~~rDTv~vpp~g~~~irf~a-dnpG~w 531 (571)
|.+ .+.||||||||+||||+++.+ .|++. ..++ ..++.|||||.|+|+++++|+|++ ||||.|
T Consensus 413 N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w 488 (513)
T 2wsd_A 413 NPT---RGTHPIHLHLVSFRVLDRRPFDIARYQES-GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRY 488 (513)
T ss_dssp ECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHH-CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEE
T ss_pred cCC---CCCcCEeEeCceEEEEEecCccccccccc-ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCE
Confidence 965 379999999999999998742 22211 0112 224569999999999999999998 799999
Q ss_pred EEeeechhhhhcccEEEEEEeC
Q 039250 532 FMHCHFDIHQSWGLGTVLIVKN 553 (571)
Q Consensus 532 ~~HCHil~H~d~GM~~~~~V~~ 553 (571)
+|||||++|+|.|||+.|+|.+
T Consensus 489 ~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 489 VWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp EEEESCHHHHTTTCEEEEEEBC
T ss_pred EEEcCChhhhhcCCceeEEEeC
Confidence 9999999999999999999974
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.5e-79 Score=650.56 Aligned_cols=413 Identities=21% Similarity=0.303 Sum_probs=310.4
Q ss_pred CCcceEEEEEEEEEEEeec-CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCcc
Q 039250 29 RGRSTRFYEFKIQATRVNK-LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYI 107 (571)
Q Consensus 29 ~~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 107 (571)
+.+.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+++++|+|||||+++++ ++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 3467899999999999996 69999999999999999999999999999999999999999999999864 579997
Q ss_pred ccCcCCCCCeEEEEEEeCCC-CcceeEeeccccc-----ccceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHH
Q 039250 108 TQCPIQSGQTFTYEFTMFQQ-KGTFFWHAHVSWL-----RGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQ 181 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~~-~Gt~wYH~H~~~~-----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 181 (571)
||+|+||++|+|+|+++++ +||||||||.++. .+||+|+|||+++++...++ +.++ ++++||+++...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999999543 8999999998653 24999999999987654433 3444 9999999875432
Q ss_pred HH----HHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCC
Q 039250 182 LE----RQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAE 257 (571)
Q Consensus 182 ~~----~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~ 257 (571)
+. ... .. ...++.++|||+.. |.+++++|+ ||||||+|+.+.+.|+|+||+|+|||+||.
T Consensus 197 ~~~~~~~~~-~~---g~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg 260 (481)
T 3zx1_A 197 IPNNNLNDW-LN---GREGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGG 260 (481)
T ss_dssp CCCCCHHHH-HH---CCCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTE
T ss_pred cccccchhh-cc---CCcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCC
Confidence 21 000 01 13578999999954 899999998 999999999999999999999999999987
Q ss_pred CC-CeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCC--CccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCc
Q 039250 258 YT-KPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQG--VSFQNISAIAYFQYLGAQPNSLALPATLPRFNDN 334 (571)
Q Consensus 258 ~~-~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~ 334 (571)
++ +|+.++++.|+|||||||+|++++ ++.|.+.+........ ...........+++.+.+ ..+| .
T Consensus 261 ~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~lP----~---- 328 (481)
T 3zx1_A 261 LIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN---VELP----K---- 328 (481)
T ss_dssp EEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC---CCCC----S----
T ss_pred ccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCCCC---ccCC----c----
Confidence 76 899999999999999999999986 5889998865443211 011111223444444311 1223 1
Q ss_pred cchhhhcccCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCce------eEEeecceeecCCChhHHhhh
Q 039250 335 LAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGV------MAASMNNISFIKPNVSVLEAY 408 (571)
Q Consensus 335 ~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~in~~~~~~p~~~ll~~~ 408 (571)
.+.++.+. ...+++..+.++....... ......... ..|+|||+.|...
T Consensus 329 --------~l~~~~~~---~~~~~~r~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~iNG~~~~~~-------- 383 (481)
T 3zx1_A 329 --------NLKIFKPS---EEPKEFKEIIMSEDHMQMH------GMMGKSEGELKIALASMFLINRKSYDLK-------- 383 (481)
T ss_dssp --------CSCCCCCC---CCCCEEEEEEEEECCSTTT------TGGGCCHHHHHHHHHTTEEETTBCCCTT--------
T ss_pred --------cccCCCCC---CCCCcEEEEEEeccchhcc------cccccccccccccccceeEECCEeCCCC--------
Confidence 01111111 1112333344433210000 000000000 1388888765211
Q ss_pred hhccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEe
Q 039250 409 YKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGY 488 (571)
Q Consensus 409 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~ 488 (571)
...+.++.|++|+|+|.|.+ .+.|||||||+.|||+++
T Consensus 384 ---------------------------------------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~ 421 (481)
T 3zx1_A 384 ---------------------------------------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISS 421 (481)
T ss_dssp ---------------------------------------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEE
T ss_pred ---------------------------------------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEe
Confidence 13357889999999999965 489999999999999998
Q ss_pred --ccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEe
Q 039250 489 --GTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 489 --~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
+... ....++.|||||.|+|+++++|+|+|||||.|+|||||++|+|.|||+.|+|.
T Consensus 422 ~~~g~~-------~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 422 KLNGKV-------QKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EETTEE-------EECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred cccCCC-------CCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 3211 11245789999999999999999999999999999999999999999999996
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.8e-78 Score=674.54 Aligned_cols=461 Identities=17% Similarity=0.173 Sum_probs=307.4
Q ss_pred ceEEEEEEEEEEEee--cCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCC------------------------
Q 039250 32 STRFYEFKIQATRVN--KLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYN------------------------ 85 (571)
Q Consensus 32 ~~~~~~l~i~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~------------------------ 85 (571)
..+.|+|++++...+ +++..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 31 ~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~ 110 (612)
T 3gyr_A 31 VTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEP 110 (612)
T ss_dssp TTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSC
T ss_pred CcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccc
Confidence 456788888888755 456788999999999999999999999999999998754
Q ss_pred -----------------eeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccccc-----cc
Q 039250 86 -----------------ATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLR-----GT 143 (571)
Q Consensus 86 -----------------~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~-----~G 143 (571)
|+|||||+++.+ ++||++ ||+|+||++|+|+|++++++||||||||.++.+ +|
T Consensus 111 ~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~G 185 (612)
T 3gyr_A 111 GRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp SCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhcc
Confidence 678999998865 469876 899999999999999977789999999997632 49
Q ss_pred eeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHHHHHHHh-------------h---CCCCCCCCCcEEEcCccCC
Q 039250 144 VYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQVL-------------A---SGGAPPPSNAYTINGHPGP 207 (571)
Q Consensus 144 l~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~---~g~~~~~~~~~~iNG~~~~ 207 (571)
|+|+|||+++++..++++.+++|++|+|+||+++...+...... . .......++.+++||+..
T Consensus 186 l~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~- 264 (612)
T 3gyr_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc-
Confidence 99999999988777777788999999999998765322110000 0 001123567889999854
Q ss_pred CCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCc-------eeEEEEeCCCCC-CeeEe------ceEEeCCCc
Q 039250 208 NYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANH-------KLTIVEADAEYT-KPFST------DRVMLGPGQ 273 (571)
Q Consensus 208 ~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh-------~~~via~DG~~~-~P~~~------d~l~l~pge 273 (571)
|.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.+ ++|.|+|||
T Consensus 265 ---------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGe 334 (612)
T 3gyr_A 265 ---------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAE 334 (612)
T ss_dssp ---------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTC
T ss_pred ---------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccce
Confidence 8888886 58999999999999999999988 599999999998 67665 489999999
Q ss_pred eEEEEEEeCCCCceeEEEeec-ccccCC--CccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCC
Q 039250 274 TVNVLVTADQPIGKYSMAMGP-YMSAQG--VSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPV 350 (571)
Q Consensus 274 R~dv~v~~~~~~g~~~i~~~~-~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~ 350 (571)
||||+|++++.+|.++..... ...... ..........+++|........... ..|...... .... ..
T Consensus 335 RydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~--------~~~~-~~ 404 (612)
T 3gyr_A 335 RFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSF-ALPEVLSGS--------FRRM-SH 404 (612)
T ss_dssp EEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCC-CCCSSCCSS--------CCCC-CT
T ss_pred EEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcc-ccccccccc--------cccc-cc
Confidence 999999999876665544332 211111 0111223345566654322211111 111110000 0000 00
Q ss_pred CCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceee----cCCChhHHhhhhhccCcccccCCCCCCcc
Q 039250 351 PVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISF----IKPNVSVLEAYYKKIDGIFTEDFPEAPLK 426 (571)
Q Consensus 351 ~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~----~~p~~~ll~~~~~~~~g~~~~~~~~~~p~ 426 (571)
..+ ...... ........ ........+.+..... ..+.. +..........+.
T Consensus 405 ~~~--~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 459 (612)
T 3gyr_A 405 DIP--HGHRLI-VLTPPGTK-----------GSGGHPEIWEMAEVEDPADVQVPAE-----------GVIQVTGADGRTK 459 (612)
T ss_dssp TSC--CEEEEE-EEECTTCT-----------TTTTCCEEEEEEECC-----CCSCT-----------TEEEEECTTSCEE
T ss_pred ccc--cccccc-cccccccc-----------ccccccccccccccccccccccccc-----------ceeeeccCCCccc
Confidence 000 001110 00000000 0000111121111110 00000 0000000001111
Q ss_pred ccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCC----------
Q 039250 427 FYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQ---------- 496 (571)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~---------- 496 (571)
.+..++ ....+...+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.++..
T Consensus 460 ~~~~n~----------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~ 526 (612)
T 3gyr_A 460 TYRRTA----------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTP 526 (612)
T ss_dssp EEEEEE----------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSC
T ss_pred cccccC----------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCccccccccccccc
Confidence 111111 1122335578899999999999975 48999999999999999865433211
Q ss_pred -------CCCCCCCCCCcceeEEeCCCcEEEEEEE-ecCceeeEEeeechhhhhcccEEEEEEeCCCC
Q 039250 497 -------TANFNLIDPPYMNTIGVPVGGWAAIRFT-ADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKG 556 (571)
Q Consensus 497 -------~~~~~~~~p~~rDTv~vpp~g~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 556 (571)
....+..++.|||||.|+++++++|||+ +||||.|+||||||+|||.|||+.|+|.+++.
T Consensus 527 ~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 527 VRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp EEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 1234556788999999999999999998 79999999999999999999999999987653
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.2e-78 Score=645.57 Aligned_cols=393 Identities=18% Similarity=0.252 Sum_probs=299.5
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEECCc-CCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCc
Q 039250 33 TRFYEFKIQATRVNKLCNAKDIVTVNNM-FPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCP 111 (571)
Q Consensus 33 ~~~~~l~i~~~~~~~~g~~~~~~~~Ng~-~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~ 111 (571)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+++++++|||||+++++ ++||+|+ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 45677777 899999 9999999999999999999999999999999999975 4799997 99
Q ss_pred CCCCCeEEEEEEeCCCCcceeEeecccc----cc-cceeeEEEEecCCCCCCCCCCCC-ccEEEEEeeEeeccHHHHHH-
Q 039250 112 IQSGQTFTYEFTMFQQKGTFFWHAHVSW----LR-GTVYGAIVVYPKTGVPYPFQFPY-QEHIIILGEYWLQDVVQLER- 184 (571)
Q Consensus 112 i~PG~~~~y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~~~~- 184 (571)
|+||++|+|+|++++++||||||||.++ +. +||+|+|||+++++. .+++ +| +|++|+++||+++. .++..
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~ 157 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYN 157 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Cccccc
Confidence 9999999999999558999999999654 32 499999999998765 3333 45 89999999999876 33211
Q ss_pred -HHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEE--cC---ceeEEEEeCCCC
Q 039250 185 -QVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAI--AN---HKLTIVEADAEY 258 (571)
Q Consensus 185 -~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i--~g---h~~~via~DG~~ 258 (571)
... .+.....++.++|||+.. |.+++++| +|||||+|+|+.+.+.|+| +| |+|+|||+||.+
T Consensus 158 ~~~~-~~~~~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~ 225 (448)
T 3aw5_A 158 PTPM-EMIAGFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGF 225 (448)
T ss_dssp CCHH-HHHHCCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEE
T ss_pred cccc-ccccCccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCc
Confidence 000 001124578999999954 89999999 9999999999999999999 99 999999999999
Q ss_pred CC-eeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCC---------CccCCcceEEEEEEcCCCCCCCCCCCCC
Q 039250 259 TK-PFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQG---------VSFQNISAIAYFQYLGAQPNSLALPATL 328 (571)
Q Consensus 259 ~~-P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~---------~~~~~~~~~ail~y~~~~~~~~~~p~~~ 328 (571)
++ |+.++++.|+|||||||+|+++ .+.|+|++.....+.. .........++++|.+..... . |..
T Consensus 226 ~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~- 300 (448)
T 3aw5_A 226 LARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAV-P-VEA- 300 (448)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCC-C-CCC-
T ss_pred cCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCC-C-ccc-
Confidence 97 9999999999999999999998 3789999987653211 011123456788887653221 0 101
Q ss_pred CCCCCccchhhhcccCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhh
Q 039250 329 PRFNDNLAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAY 408 (571)
Q Consensus 329 p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~ 408 (571)
|..+.+...+...++++.+.. + ...|+|||++|..+.
T Consensus 301 ---------------L~~lp~~~~~~~~~~~~~l~~--~-------------------~~~~~iNg~~~~~~~------- 337 (448)
T 3aw5_A 301 ---------------LSDPPPEPPKPTRTRRFALSL--S-------------------GMQWTINGMFWNASN------- 337 (448)
T ss_dssp ---------------CSCCCCCCCCCSEEEEEEEEE--E-------------------TTEEEETTBCCCTTC-------
T ss_pred ---------------cCCCCCCCCCCCceEEEEEeC--C-------------------CceeeECCCcCCCCC-------
Confidence 111111112223344444332 1 125999999874321
Q ss_pred hhccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEE-eeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEE
Q 039250 409 YKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKV-LEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVG 487 (571)
Q Consensus 409 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~ 487 (571)
..+. ++.|++|+|+|+|.+. .+.||||||||+||||+
T Consensus 338 ----------------------------------------p~~~~~~~g~~v~~~i~N~~~--~~~HP~HLHG~~F~Vl~ 375 (448)
T 3aw5_A 338 ----------------------------------------PLFEHVSVEGVELWEIVNDKA--SMPHPMHLHGFPMWIIE 375 (448)
T ss_dssp ----------------------------------------TTCCCEEECEEEEEEEEECSS--SCCEEEEESSSCBEEEE
T ss_pred ----------------------------------------CceeccCCCCeEEEEEEcCCC--CCCcCEEECCceEEEEE
Confidence 0113 5789999999999651 47999999999999999
Q ss_pred eccCCCCC--CCCCC----CCCCCCcceeEEeCCCcEEEEE--EE---ecCceeeEEeeechhhhhcccEEEEEEe
Q 039250 488 YGTGNYDP--QTANF----NLIDPPYMNTIGVPVGGWAAIR--FT---ADNPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 488 ~~~g~~~~--~~~~~----~~~~p~~rDTv~vpp~g~~~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
++ |.+.. ....+ +..++.|||||.|+|+++++|+ |+ +||| |+|||||++|||.|||++|+|.
T Consensus 376 ~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 376 RK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred ec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 95 33320 01122 2335579999999999999766 88 8999 9999999999999999999883
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.3e-77 Score=638.03 Aligned_cols=429 Identities=18% Similarity=0.213 Sum_probs=308.1
Q ss_pred ceEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCc
Q 039250 32 STRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCP 111 (571)
Q Consensus 32 ~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~ 111 (571)
..++|+|++++..++++|..+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++.+. +||+| ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCc
Confidence 4578999999999999999999999999999999999999999999999999999999999999864 69997 899
Q ss_pred CCCCCeEEEEEEeCCCCcceeEeecccccc-----cceeeEEEEecCCCCCCCCCC--CCccEEEEEeeEeeccHHHHHH
Q 039250 112 IQSGQTFTYEFTMFQQKGTFFWHAHVSWLR-----GTVYGAIVVYPKTGVPYPFQF--PYQEHIIILGEYWLQDVVQLER 184 (571)
Q Consensus 112 i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 184 (571)
|+||++++|+|++++++||||||||.++.+ +||+|+|||+++++...+++. ..+|++++++||+++...++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 999999999999966689999999997532 499999999987665444443 3469999999999865432110
Q ss_pred HHh-hCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEE-cCceeEEEEeCCCCC-Ce
Q 039250 185 QVL-ASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAI-ANHKLTIVEADAEYT-KP 261 (571)
Q Consensus 185 ~~~-~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~P 261 (571)
... ........+|.++|||+.. |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||.++ +|
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P 239 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEE
T ss_pred cccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCc
Confidence 000 0000123578999999954 66766 5689999999999999999999 699999999999987 89
Q ss_pred eEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCC--CccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhh
Q 039250 262 FSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQG--VSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKT 339 (571)
Q Consensus 262 ~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~ 339 (571)
+.+++|.|+|||||||+|++++ .+.|.+.+........ ..+........++....... ..+|..+
T Consensus 240 ~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~L----------- 306 (488)
T 3od3_A 240 VKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISAS-GALPDTL----------- 306 (488)
T ss_dssp EEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECC-CCCCSCC-----------
T ss_pred cEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccCccceeEecccccCCC-CCCCccc-----------
Confidence 9999999999999999999986 5789998765443211 11221111222222111111 0122111
Q ss_pred hcccCccCCCC-CCCccCceEEEEEEeccc------------cc-cCCCCC---------CCcccC-CCCcee----EEe
Q 039250 340 VMDGLRSLNPV-PVPKEIDANLFVTIGLNV------------QK-CRSGNP---------QQNCRG-LNNGVM----AAS 391 (571)
Q Consensus 340 ~~~~l~~l~p~-~~p~~~d~~~~~~~~~~~------------~~-~~~~~~---------~~~~~~-~~~~~~----~~~ 391 (571)
..+.+. .......+++.+.+.... .. ...++. ...+.. ..+..+ .|+
T Consensus 307 -----~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 381 (488)
T 3od3_A 307 -----SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANK 381 (488)
T ss_dssp -----CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEE
T ss_pred -----ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceee
Confidence 111100 011223455555542100 00 000000 000000 000011 378
Q ss_pred ecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCC
Q 039250 392 MNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTT 471 (571)
Q Consensus 392 in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~ 471 (571)
|||+.|... .....++.|++|+|+|.|.+. .
T Consensus 382 ING~~~~~~-----------------------------------------------~~~~~~~~G~~e~w~l~N~~~--~ 412 (488)
T 3od3_A 382 INGQAFDMN-----------------------------------------------KPMFAAAKGQYERWVISGVGD--M 412 (488)
T ss_dssp ETTBCCCTT-----------------------------------------------CCSEECCBSSCEEEEEECTTC--C
T ss_pred ECCeeCCCC-----------------------------------------------CCceEcCCCCEEEEEEEeCCC--C
Confidence 888876311 123567899999999999752 3
Q ss_pred CCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEec----CceeeEEeeechhhhhcccEE
Q 039250 472 ENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTAD----NPGVWFMHCHFDIHQSWGLGT 547 (571)
Q Consensus 472 ~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~ad----npG~w~~HCHil~H~d~GM~~ 547 (571)
+.|||||||++|+|++++.... ...++.|||||.|+ |++++|+|+++ +||.|+|||||++|||.|||+
T Consensus 413 ~~Hp~HlHg~~F~Vl~~~g~~~-------~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~ 484 (488)
T 3od3_A 413 MLHPFHIHGTQFRILSENGKPP-------AAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMML 484 (488)
T ss_dssp CCEEEEETTCCBEEEEBTTBCC-------CGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEE
T ss_pred CCccEEEcCceEEEeccCCCcc-------ccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcE
Confidence 7899999999999999864322 12356799999999 99999999975 578999999999999999999
Q ss_pred EEEE
Q 039250 548 VLIV 551 (571)
Q Consensus 548 ~~~V 551 (571)
.|+|
T Consensus 485 ~f~V 488 (488)
T 3od3_A 485 GFTV 488 (488)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=9.4e-76 Score=638.98 Aligned_cols=443 Identities=18% Similarity=0.213 Sum_probs=314.2
Q ss_pred cceEEEEEEEEEEEeec--CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCC-----------------------
Q 039250 31 RSTRFYEFKIQATRVNK--LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYN----------------------- 85 (571)
Q Consensus 31 ~~~~~~~l~i~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~----------------------- 85 (571)
...++|+|++++....+ ++..+.+|+|||++|||||+|++||+|+|+++|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 34688999999998764 45689999999999999999999999999999998853
Q ss_pred ------------------eeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccc----c-cc
Q 039250 86 ------------------ATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW----L-RG 142 (571)
Q Consensus 86 ------------------~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~----~-~~ 142 (571)
+++||||+++.+. +||++ ||+|+||++++|+|++.+++||||||||.++ + .+
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999876 59987 8999999999999999668999999999986 2 35
Q ss_pred ceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHH-HHH-HH------hh----CCCC----CCCCCcEEEcCccC
Q 039250 143 TVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQ-LER-QV------LA----SGGA----PPPSNAYTINGHPG 206 (571)
Q Consensus 143 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~~------~~----~g~~----~~~~~~~~iNG~~~ 206 (571)
||+|+|||+++++..++++.+|+|++|+++||+++...+ .+. .. .. .++. +..+|.++|||+..
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987666667778999999999999875321 000 00 00 1111 24678999999954
Q ss_pred CCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCc-------eeEEEEeCCCCC-CeeEec------eEEeCCC
Q 039250 207 PNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANH-------KLTIVEADAEYT-KPFSTD------RVMLGPG 272 (571)
Q Consensus 207 ~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh-------~~~via~DG~~~-~P~~~d------~l~l~pg 272 (571)
|.++|++| +|||||||+|+++.+.|+|++| +|+|||+||.++ +|+.++ +|.|+||
T Consensus 265 ----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 265 ----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 89999999 9999999999999999999999 899999999999 699999 9999999
Q ss_pred ceEEEEEEeCCCCc-eeEEEeecccccCC-Ccc---CCcceEEEEEEcCCCCCC-CCCCCCCCCCCCccchhhhcccCcc
Q 039250 273 QTVNVLVTADQPIG-KYSMAMGPYMSAQG-VSF---QNISAIAYFQYLGAQPNS-LALPATLPRFNDNLAVKTVMDGLRS 346 (571)
Q Consensus 273 eR~dv~v~~~~~~g-~~~i~~~~~~~~~~-~~~---~~~~~~ail~y~~~~~~~-~~~p~~~p~~~~~~~~~~~~~~l~~ 346 (571)
|||||+|++++.+| +|.|+......... ... ........+++....... ..+|..+... ...
T Consensus 334 eR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~------------~~~ 401 (612)
T 2g23_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGS------------FRR 401 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSS------------CCC
T ss_pred CeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccc------------ccc
Confidence 99999999998666 58888764211110 000 001122334444332111 1223111100 000
Q ss_pred CCCCCCCccCceEEEEEE---eccccc-----------cCCC--CCCC---cccCCCCceeEEeecceeecCCChhHHhh
Q 039250 347 LNPVPVPKEIDANLFVTI---GLNVQK-----------CRSG--NPQQ---NCRGLNNGVMAASMNNISFIKPNVSVLEA 407 (571)
Q Consensus 347 l~p~~~p~~~d~~~~~~~---~~~~~~-----------~~~~--~~~~---~~~~~~~~~~~~~in~~~~~~p~~~ll~~ 407 (571)
+.+ ..+. .+++.+.. ...... ...+ .+.. ......+....|++||+.|.
T Consensus 402 l~~-~~~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~--------- 469 (612)
T 2g23_A 402 MSH-DIPH--GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN--------- 469 (612)
T ss_dssp CCT-TSCC--EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT---------
T ss_pred CCc-cccc--ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC---------
Confidence 100 0000 01111100 000000 0000 0000 00000122234555555432
Q ss_pred hhhccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEE
Q 039250 408 YYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVG 487 (571)
Q Consensus 408 ~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~ 487 (571)
....+.++.|++|+|+|.|.+ .+.|||||||+.|||++
T Consensus 470 ---------------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~ 507 (612)
T 2g23_A 470 ---------------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLG 507 (612)
T ss_dssp ---------------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEE
T ss_pred ---------------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEec
Confidence 124567899999999999975 48999999999999999
Q ss_pred eccCCCC---CC--------------CCCCCCCCCCcceeEEeCCCcEEEEEEEec-CceeeEEeeechhhhhcccEEEE
Q 039250 488 YGTGNYD---PQ--------------TANFNLIDPPYMNTIGVPVGGWAAIRFTAD-NPGVWFMHCHFDIHQSWGLGTVL 549 (571)
Q Consensus 488 ~~~g~~~---~~--------------~~~~~~~~p~~rDTv~vpp~g~~~irf~ad-npG~w~~HCHil~H~d~GM~~~~ 549 (571)
++.+.++ .. ....+..++.|||||.|+|+++++|+|+|+ |||.|+|||||++|||.|||+.|
T Consensus 508 r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f 587 (612)
T 2g23_A 508 RDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPF 587 (612)
T ss_dssp EEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEE
T ss_pred ccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEE
Confidence 8632211 10 022344566799999999999999999999 99999999999999999999999
Q ss_pred EEeCCC
Q 039250 550 IVKNGK 555 (571)
Q Consensus 550 ~V~~~~ 555 (571)
+|.+.+
T Consensus 588 ~V~p~~ 593 (612)
T 2g23_A 588 VVMPPE 593 (612)
T ss_dssp EEECHH
T ss_pred EECchh
Confidence 998643
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=3.1e-53 Score=430.55 Aligned_cols=271 Identities=27% Similarity=0.383 Sum_probs=226.8
Q ss_pred eEEEEEEEEEEEeec-CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCc
Q 039250 33 TRFYEFKIQATRVNK-LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCP 111 (571)
Q Consensus 33 ~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~ 111 (571)
+++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++.+..++||+|+++||+
T Consensus 2 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~ 81 (318)
T 3g5w_A 2 KREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHA 81 (318)
T ss_dssp EEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCC
T ss_pred eEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCccccccc
Confidence 689999999999887 5888999999999999999999999999999999999999999999999887899999999999
Q ss_pred CCCCCeEEEEEEeCCCCcceeEeecccccc----cceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHHHHHHHh
Q 039250 112 IQSGQTFTYEFTMFQQKGTFFWHAHVSWLR----GTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQVL 187 (571)
Q Consensus 112 i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 187 (571)
|+||++++|+|++ +++||||||||.+.+. +||+|+|||++++....+. .+|+|++|+++||+++.... ..
T Consensus 82 i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~~ 155 (318)
T 3g5w_A 82 IEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----PG 155 (318)
T ss_dssp BCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----TT
T ss_pred CCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----cc
Confidence 9999999999999 8999999999997542 5999999999876432211 46889999999998754211 11
Q ss_pred hCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCC-CeeEece
Q 039250 188 ASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYT-KPFSTDR 266 (571)
Q Consensus 188 ~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~P~~~d~ 266 (571)
..+.....++.++|||+..+ ....+++++|++|||||+|++.. .+.|||+||+|+||+.||.++ +|..+|+
T Consensus 156 ~~~~~~~~~d~~~ING~~~~-------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dt 227 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDT 227 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESE
T ss_pred cCCCCCCcCcEEEEcCcCCC-------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccE
Confidence 11222235789999999542 23459999999999999999975 578999999999999999988 7999999
Q ss_pred EEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCC
Q 039250 267 VMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQ 318 (571)
Q Consensus 267 l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (571)
+.|.||||+||++++++ ||.|.++||................++|+|++..
T Consensus 228 v~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 228 VLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999999985 7999999998644321001112467999998864
No 19
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.2e-54 Score=485.13 Aligned_cols=239 Identities=13% Similarity=0.176 Sum_probs=182.3
Q ss_pred EEEEEEEEeecC-CceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCc--------c
Q 039250 37 EFKIQATRVNKL-CNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAY--------I 107 (571)
Q Consensus 37 ~l~i~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~--------~ 107 (571)
.+++++...... |..++.|+ ++|||+|||++||+|+|+|+|.+++++||||||+++... +||+|+ +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 455555555543 66666654 999999999999999999999999999999999998753 466664 8
Q ss_pred ccCcCCCCCeEEEEEEeCC---------CCcceeEeeccccc---ccceeeEEEEecCCCCCCCCCCCCccEEEEEee--
Q 039250 108 TQCPIQSGQTFTYEFTMFQ---------QKGTFFWHAHVSWL---RGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGE-- 173 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~---------~~Gt~wYH~H~~~~---~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d-- 173 (571)
+||+|+||++|+|+|++++ ++||||||||.+.. .+||+|+|||+++.....+.....+|+++++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 8999999999999999843 46999999999873 249999999998765432221223788887754
Q ss_pred ----EeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccc-eEEEEEcCce
Q 039250 174 ----YWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNM-ENFFAIANHK 248 (571)
Q Consensus 174 ----~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~-~~~~~i~gh~ 248 (571)
|+........... .........+.++|||+.. ...+.+++++|++|||||+|++... .+.|||+||+
T Consensus 205 e~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~ING~~~-------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~ 276 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQDR-DAASARAWPKMHTVNGYVN-------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHT 276 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCT-------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCC
T ss_pred CCccccccccccccccC-CCccccccCceEEECCccC-------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCE
Confidence 4443321111111 1111222356789999953 1357899999999999999999775 6789999999
Q ss_pred eEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccc
Q 039250 249 LTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 249 ~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~ 297 (571)
|+|++ ..+|++.|.|||+++|++++++ +|.|+++||....
T Consensus 277 f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~~H 316 (742)
T 2r7e_A 277 FLVRN--------HRQASLEISPITFLTAQTLLMD-LGQFLLFCHISSH 316 (742)
T ss_dssp CEETT--------EECCSCCCCTTCCCEEEECCCS-CSEECCCCCSSSS
T ss_pred EEEEe--------EecceEEeCCCcEEEEEEEeCC-CeeEEEEeCChhH
Confidence 99973 3589999999999999999986 6999999998544
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1e-51 Score=424.14 Aligned_cols=272 Identities=24% Similarity=0.414 Sum_probs=225.6
Q ss_pred ceEEEEEEEEEEEeecC-CceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccC
Q 039250 32 STRFYEFKIQATRVNKL-CNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQC 110 (571)
Q Consensus 32 ~~~~~~l~i~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~ 110 (571)
++++|+|++++..++++ |.++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++.+.+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 36899999999999885 99999999999999999999999999999999999999999999999999889999999999
Q ss_pred cCCCCCeEEEEEEeCCCCcceeEeecccc--c-c-cceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHHHHHHH
Q 039250 111 PIQSGQTFTYEFTMFQQKGTFFWHAHVSW--L-R-GTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQV 186 (571)
Q Consensus 111 ~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 186 (571)
+|+||++++|+|++ +++||||||||... + . +||+|++||+++++...+. ..|+|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheecccccc----c
Confidence 99999999999999 79999999999875 2 3 6999999999876533221 35789999999998632110 0
Q ss_pred hhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCC-eeEec
Q 039250 187 LASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK-PFSTD 265 (571)
Q Consensus 187 ~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~-P~~~d 265 (571)
...+.....++.++|||+... ....+++++|++|||||+|++.. .+.|||+||+|+||+.||.+++ |..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 001111225788999999542 23568999999999999999954 7889999999999999999884 89999
Q ss_pred eEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCC
Q 039250 266 RVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQ 318 (571)
Q Consensus 266 ~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (571)
++.|.||||+||+|++++ ||.|+++|+....+...........++++|++..
T Consensus 228 tv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999999999999986 6999999998654211000122457999998764
No 21
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.7e-51 Score=475.10 Aligned_cols=449 Identities=15% Similarity=0.169 Sum_probs=294.0
Q ss_pred cceEEEEEEEEEEEeecC--Cc--------------------------eeeEE-------EECCc--------CCCceEE
Q 039250 31 RSTRFYEFKIQATRVNKL--CN--------------------------AKDIV-------TVNNM--------FPGPVVY 67 (571)
Q Consensus 31 ~~~~~~~l~i~~~~~~~~--g~--------------------------~~~~~-------~~Ng~--------~pgP~i~ 67 (571)
+++|+|.+.|++..++.. +. .+.++ +||+. +|||+||
T Consensus 19 ~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PGP~Ir 98 (1065)
T 2j5w_A 19 AKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPIIK 98 (1065)
T ss_dssp -CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSCCCEE
T ss_pred cceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcCCeEE
Confidence 679999999999987754 22 22333 47777 9999999
Q ss_pred EecCCEEEEEEEeCCCCCeeEEecccccCC----CCCCCCCCc--cccCcCCCCCeEEEEEEeCCC---------Cccee
Q 039250 68 AQEDDRIIVKVTNQSPYNATIHWHGVRQRL----SCWFDGPAY--ITQCPIQSGQTFTYEFTMFQQ---------KGTFF 132 (571)
Q Consensus 68 v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~----~~~~DG~~~--~~q~~i~PG~~~~y~~~~~~~---------~Gt~w 132 (571)
+++||+|+|+|+|.++++++|||||++++. .+|+||+++ ++||+|+||++|+|+|+++++ +||||
T Consensus 99 ~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~w 178 (1065)
T 2j5w_A 99 AETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRI 178 (1065)
T ss_dssp EETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEEE
T ss_pred EeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCceEEE
Confidence 999999999999999999999999999874 467788888 899999999999999999544 59999
Q ss_pred Eeecccccc---cceeeEEEEecCCCCCCCCC-CCCccEEEEEee------EeeccHHHHHHHHh-hCCCC-------CC
Q 039250 133 WHAHVSWLR---GTVYGAIVVYPKTGVPYPFQ-FPYQEHIIILGE------YWLQDVVQLERQVL-ASGGA-------PP 194 (571)
Q Consensus 133 YH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~d------~~~~~~~~~~~~~~-~~g~~-------~~ 194 (571)
||||.+.++ +||+|+|||++++....+.+ .+|+|++|+++| |++..... ... ..+.. ..
T Consensus 179 YHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~---~~~~~p~~~~~~~~~~~~ 255 (1065)
T 2j5w_A 179 YHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIK---TYCSEPEKVDKDNEDFQQ 255 (1065)
T ss_dssp EECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHH---HHCSCGGGCCTTCHHHHH
T ss_pred EEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhh---hhhcCccccccccccccc
Confidence 999999874 59999999999876544432 468899999995 44432211 111 00000 00
Q ss_pred CCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCcc-ceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCc
Q 039250 195 PSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLN-MENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQ 273 (571)
Q Consensus 195 ~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pge 273 (571)
.++.++|||+.. ...+.+++++|++|||||+|+|.. ..+.|+|+||+|++ +|+.+|++.|+|||
T Consensus 256 ~~~~~~iNG~~~-------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pGe 320 (1065)
T 2j5w_A 256 SNRMYSVNGYTF-------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPAT 320 (1065)
T ss_dssp HTEEEEETTEET-------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBTC
T ss_pred cCcEEEECCccC-------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCCc
Confidence 234789999953 135789999999999999999976 58899999999994 68899999999999
Q ss_pred eEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCC-CCCCCCCC-CCCccchhhhcccCccCCC--
Q 039250 274 TVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSL-ALPATLPR-FNDNLAVKTVMDGLRSLNP-- 349 (571)
Q Consensus 274 R~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~-~~p~~~p~-~~~~~~~~~~~~~l~~l~p-- 349 (571)
|+||+|++++ +|.|+|+|+....... ...+.++|.+.....+ ..| ..+. +....++....-++.+...
T Consensus 321 r~dVlv~~~~-pG~y~i~~h~~~h~~~------Gm~~~~~V~~~~~~~~~~~~-~g~~~~~~~i~A~e~~wdy~~~~~~~ 392 (1065)
T 2j5w_A 321 LFDAYMVAQN-PGEWMLSCQNLNHLKA------GLQAFFQVQECNKSSSKDNI-RGKHVRHYYIAAEEIIWNYAPSGIDI 392 (1065)
T ss_dssp EEEEEEECCS-CEEEEEEECSHHHHHT------TCEEEEEEECSCCCCCCCCC-TTSEEEEEEEEEEEEEEESCTTSBCT
T ss_pred EEEEEEEeCC-CeeEEEEecCcchhhC------CCEEEEEEecCCCccccccc-cccceeEEEEeceecccccCCCCccc
Confidence 9999999997 7999999998644321 3678888876543211 011 0000 0000000000001100000
Q ss_pred ----CCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCc
Q 039250 350 ----VPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPL 425 (571)
Q Consensus 350 ----~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p 425 (571)
...++......++. . .....++.+.-.++ +.|. ++.|+...+. +|
T Consensus 393 ~~~~~~~~~~s~~~~~l~----~-----------~~~~ig~~y~k~v~-~~y~--------------d~~f~~~~~~-~~ 441 (1065)
T 2j5w_A 393 FTKENLTAPGSDSAVFFE----Q-----------GTTRIGGSYKKLVY-REYT--------------DASFTNRKER-GP 441 (1065)
T ss_dssp TTCCBTTCTTCTTHHHHC----C-----------BTTBCCSEEEEEEE-EEES--------------STTCCSBCCC-CG
T ss_pred ccccccCCCcccchhhhc----c-----------CCcccCceEeeeee-eccc--------------CCceEEcCcC-Cc
Confidence 00000000000000 0 00001222222222 2221 1223222111 11
Q ss_pred cccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCC
Q 039250 426 KFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDP 505 (571)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p 505 (571)
. ........+++.++.|++++++++|.. ...|+||+||+.|++++.|. .|... .....+.
T Consensus 442 ~--------------~~~~g~lgpvi~a~~gd~i~i~f~N~~---~~~~s~h~hG~~f~~~~~g~-~~~~~--~~~~~~~ 501 (1065)
T 2j5w_A 442 E--------------EEHLGILGPVIWAEVGDTIRVTFHNKG---AYPLSIEPIGVRFNKNNEGT-YYSPN--YNPQSRS 501 (1065)
T ss_dssp G--------------GGGGTTSCCCEEEETTEEEEEEEEECS---SSCBCCEEESSBCCGGGCSB-CCBCC---------
T ss_pred c--------------cccccccCceEEEeCCCEEEEEEEECC---CCCccCcccceeeeccCCCc-ccccc--cccccCC
Confidence 0 000111246889999999999999975 37899999999999988853 22110 0000122
Q ss_pred CcceeEEeCCCcEEEEEEEec---Cce-------eeEEeeechhhhh--cccEEEEEEeCCCC
Q 039250 506 PYMNTIGVPVGGWAAIRFTAD---NPG-------VWFMHCHFDIHQS--WGLGTVLIVKNGKG 556 (571)
Q Consensus 506 ~~rDTv~vpp~g~~~irf~ad---npG-------~w~~HCHil~H~d--~GM~~~~~V~~~~~ 556 (571)
..++...|.||+..+-++... .|| .|+||+|+..=.| .|+.+.+.|.....
T Consensus 502 ~~~~~~~v~Pg~~~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGpllic~~~~ 564 (1065)
T 2j5w_A 502 VPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 564 (1065)
T ss_dssp CCCCSSCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred ccCCCcccCCCCcEEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceEEecccc
Confidence 245556778888777776642 555 7999999998766 79999999987543
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.5e-48 Score=417.09 Aligned_cols=390 Identities=15% Similarity=0.092 Sum_probs=256.8
Q ss_pred ceEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCc
Q 039250 32 STRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCP 111 (571)
Q Consensus 32 ~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~ 111 (571)
.++++++.+++..+..+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .++|+
T Consensus 27 ~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~~~ 91 (447)
T 2dv6_A 27 VVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSAIV 91 (447)
T ss_dssp EEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECCCB
T ss_pred ceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------cccee
Confidence 456666666654455444 456899999 899999999999999999988779999998532 25799
Q ss_pred CCCCCeEEEEEEeCCCCcceeEeeccccccc-ceeeEEEEecCCCCCCC------------CCC-----CCccEEEEEee
Q 039250 112 IQSGQTFTYEFTMFQQKGTFFWHAHVSWLRG-TVYGAIVVYPKTGVPYP------------FQF-----PYQEHIIILGE 173 (571)
Q Consensus 112 i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~------------~~~-----~~~e~~l~~~d 173 (571)
|+||++++|.|++ .++||||||||..+++. ||.|.|+|+++...... ++. ......+.+..
T Consensus 92 i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~l~~ 170 (447)
T 2dv6_A 92 NGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPIGPRQAKTVRIDLET 170 (447)
T ss_dssp CSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCCCSCCCCEEEEEEEE
T ss_pred cCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCccccCCCcEEEEEEEE
Confidence 9999999999999 67999999999877654 99999999986543210 000 00111111110
Q ss_pred EeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCc-cceEEEEEcCceeEEE
Q 039250 174 YWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGL-NMENFFAIANHKLTIV 252 (571)
Q Consensus 174 ~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~-~~~~~~~i~gh~~~vi 252 (571)
..... ....| ...+.+++||+. ..|.|++++|++|||||+|++. ...+.+++||. +
T Consensus 171 ~~~~~-------~~~~g---~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~ 227 (447)
T 2dv6_A 171 VEVKG-------QLDDN---TTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----T 227 (447)
T ss_dssp EEEEE-------EEETT---EEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----C
T ss_pred EEEEE-------eccCC---ceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----c
Confidence 00000 00011 234578999983 2389999999999999999985 34566788774 3
Q ss_pred EeCCCCCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCC
Q 039250 253 EADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFN 332 (571)
Q Consensus 253 a~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~ 332 (571)
+.||. | +++.|.||||+++++++++ +|.||++|+...... ... ....+.+.|.... .+| ...
T Consensus 228 ~~DG~---~---~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~--~~~-~Gl~g~l~v~~~~----~~P----~~d 289 (447)
T 2dv6_A 228 GPGGA---A---AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPT--HIT-NGMYGLLLVEPEG----GLP----QVD 289 (447)
T ss_dssp SGGGG---G---GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHH--HHH-TTCEEEEEEECTT----CSC----CCS
T ss_pred CCCCC---C---ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHH--HHh-CCCEEEEEEeCCC----CCC----CCC
Confidence 67986 3 3456999999999999986 599999998631111 000 1245666665431 112 111
Q ss_pred CccchhhhcccCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhcc
Q 039250 333 DNLAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKI 412 (571)
Q Consensus 333 ~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~ 412 (571)
. .....+ .+... .. .. ..... ..+..... . ......|.+||+.+..
T Consensus 290 ~-~~~~~~-~~~~~--~~-~~-~~~g~--~~~~~~~~-----------~--~~~~~~~~iNG~~~~~------------- 335 (447)
T 2dv6_A 290 R-EFYVMQ-GEIYT--VK-SF-GTSGE--QEMDYEKL-----------I--NEKPEYFLFNGSVGSL------------- 335 (447)
T ss_dssp E-EEEEEE-EEECB--SS-CT-TCCEE--CCBBHHHH-----------H--TTCCSEEEETTSTTCC-------------
T ss_pred e-eEEEEe-ccccc--CC-cc-ccccc--ccCChHHh-----------h--ccCCCEEEECCcccCC-------------
Confidence 0 000000 00000 00 00 00000 00000000 0 0011235555543210
Q ss_pred CcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCC
Q 039250 413 DGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGN 492 (571)
Q Consensus 413 ~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~ 492 (571)
.....+.++.|++++|+|.|.+. ...||||||||+|+||+.+.+.
T Consensus 336 ---------------------------------~~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~~ 380 (447)
T 2dv6_A 336 ---------------------------------TRSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGSV 380 (447)
T ss_dssp ---------------------------------CCCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGCS
T ss_pred ---------------------------------CCCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCcc
Confidence 01145788999999999999752 3689999999999999986432
Q ss_pred CCCCCCCCCCCCCC-cceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeCCCC
Q 039250 493 YDPQTANFNLIDPP-YMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKG 556 (571)
Q Consensus 493 ~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 556 (571)
...|. +|||+.|+||+++.|+|+++|||.|+||||+++|++.||+++|.|.....
T Consensus 381 ---------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 381 ---------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp ---------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred ---------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 12343 79999999999999999999999999999999999999999999986653
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=3.9e-47 Score=381.15 Aligned_cols=243 Identities=27% Similarity=0.346 Sum_probs=208.5
Q ss_pred cCCCcceEEEEEEEEEEEeecC-CceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCC
Q 039250 27 WPRGRSTRFYEFKIQATRVNKL-CNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPA 105 (571)
Q Consensus 27 ~~~~~~~~~~~l~i~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~ 105 (571)
.+.+..+++|+|++++..+++. |..+.+|+|||++|||+||+++||+|+|+|+|.++++++|||||++. .++||+|
T Consensus 28 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p 104 (288)
T 3gdc_A 28 LPDGRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTP 104 (288)
T ss_dssp CTTSCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCT
T ss_pred CCCCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCC
Confidence 3455678999999999988764 99999999999999999999999999999999999999999999973 4579999
Q ss_pred ccccCcCCCCCeEEEEEEeCCCCcceeEeeccccc----ccceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHH
Q 039250 106 YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWL----RGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQ 181 (571)
Q Consensus 106 ~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 181 (571)
+++|++|+||++++|+|++ +++||||||||.+.. .+||+|+|||++++..+ ..|+|++|+++||+.++
T Consensus 105 ~~~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~--- 176 (288)
T 3gdc_A 105 GIGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG--- 176 (288)
T ss_dssp TSTTCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS---
T ss_pred CccceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC---
Confidence 9999999999999999999 899999999999842 35999999999886532 46799999999998752
Q ss_pred HHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccc-eEEEEEcCceeEEEEeCCCCCC
Q 039250 182 LERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNM-ENFFAIANHKLTIVEADAEYTK 260 (571)
Q Consensus 182 ~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~ 260 (571)
+ ..++.++|||+.+.. ..+.++++.|++|||||+|++... .+.|||+||.|+|++.++....
T Consensus 177 --------g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~ 239 (288)
T 3gdc_A 177 --------G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTP 239 (288)
T ss_dssp --------T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSC
T ss_pred --------C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCC
Confidence 1 246789999995410 124689999999999999999654 6789999999999984443336
Q ss_pred eeEeceEEeCCCceEEEEEEeCCCCceeEEEeeccccc
Q 039250 261 PFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSA 298 (571)
Q Consensus 261 P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~ 298 (571)
|..+|++.|.||||++|++++++ ||.|.++||.....
T Consensus 240 ~~~~Dtv~v~pg~~~~v~~~~~~-pG~~~~hCH~~~H~ 276 (288)
T 3gdc_A 240 SEYTDTISQVQGQRGILELRFPY-PGKFMFHAHKTEFA 276 (288)
T ss_dssp SEEESEEEEETTCEEEEEECCCS-CEEEEEECSSHHHH
T ss_pred CceeeEEEeCCCceEEEEEECCC-CEEEEEEecChHHH
Confidence 79999999999999999999984 79999999976543
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1.7e-47 Score=390.67 Aligned_cols=261 Identities=19% Similarity=0.255 Sum_probs=218.0
Q ss_pred CcceEEEEEEEEEEEeec-CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCC--CCeeEEecccccCCCCCCCCCCc
Q 039250 30 GRSTRFYEFKIQATRVNK-LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSP--YNATIHWHGVRQRLSCWFDGPAY 106 (571)
Q Consensus 30 ~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DG~~~ 106 (571)
.+++++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+.. +||++.
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~ 109 (327)
T 1kbv_A 35 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAA 109 (327)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTT
T ss_pred CCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCc
Confidence 357889999999999988 799999999999999999999999999999999976 589999999852 489875
Q ss_pred cccCcCCCCCeEEEEEEeCCCCcceeEeecccc---c-ccceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHHH
Q 039250 107 ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW---L-RGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQL 182 (571)
Q Consensus 107 ~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~---~-~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 182 (571)
.+ .|.||++++|+|++ +++||||||||.++ + .+||+|+|||++++. ++.+|+|++++++||++......
T Consensus 110 ~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 110 AT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp TT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTC
T ss_pred ce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcccc
Confidence 43 59999999999999 78999999999864 2 359999999998652 23578999999999997642100
Q ss_pred -------HHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeC
Q 039250 183 -------ERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEAD 255 (571)
Q Consensus 183 -------~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~D 255 (571)
..... ...++.++|||+.+... ..+.+++++|++|||||+|+|....+.|||+||+|+||+.|
T Consensus 183 ~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~-----~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~D 252 (327)
T 1kbv_A 183 QGLQPFDMDKAV-----AEQPEYVVFNGHVGALT-----GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVE 252 (327)
T ss_dssp CEEECBCHHHHH-----HTCCSEEEETTSTTTTS-----GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccChhHhc-----cCCCceEEEcCcccCCC-----CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcC
Confidence 00110 12467999999965321 12679999999999999999988889999999999999999
Q ss_pred CCCCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCC
Q 039250 256 AEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQ 318 (571)
Q Consensus 256 G~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (571)
|.+++|..++++.|+||||+||+|++++ +|.|+++|+...... .....|+++|++..
T Consensus 253 G~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~~-----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 253 GGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAF-----NKGALGQLKVEGAE 309 (327)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHH-----HSSCEEEEEEESCC
T ss_pred CCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEeccccccc-----cCCcEEEEEECCCC
Confidence 9999999999999999999999999996 699999999865531 12368999998764
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=4.6e-46 Score=432.41 Aligned_cols=397 Identities=13% Similarity=0.113 Sum_probs=263.6
Q ss_pred ceeeEEEECCcCCC--ceEEEecCCEEEEEEEeCCCCCeeEEecccccCC-CCCCCCCCccccCcCCCCCeEEEEEEeCC
Q 039250 50 NAKDIVTVNNMFPG--PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRL-SCWFDGPAYITQCPIQSGQTFTYEFTMFQ 126 (571)
Q Consensus 50 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~-~~~~DG~~~~~q~~i~PG~~~~y~~~~~~ 126 (571)
.++.+.++||++|| |+|++++||+|+|+|.|.. +.+||||+++.+ +.|+||++.++ |+|.||.+++|+|++ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~g---~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAG---NEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECCC---STTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcCC---CcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 57899999999999 8899999999999999763 459999999999 89999999999 999999999999999 7
Q ss_pred CCcceeEeecccccc-cceeeEEEEecCCCCCCCCCCCCccEEEEE----eeEeeccHHHHHHHHh-hCCCCCCCCCcEE
Q 039250 127 QKGTFFWHAHVSWLR-GTVYGAIVVYPKTGVPYPFQFPYQEHIIIL----GEYWLQDVVQLERQVL-ASGGAPPPSNAYT 200 (571)
Q Consensus 127 ~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 200 (571)
++||||||||...++ +||.|.++|++......++..++.|.++.+ .||++.....+..+.. ..+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999998765 599999999987554445456788999999 8999877655433221 11211 23333
Q ss_pred EcCccCC----------------CCCC----------CCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEe
Q 039250 201 INGHPGP----------------NYNC----------SANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEA 254 (571)
Q Consensus 201 iNG~~~~----------------~~~~----------~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~ 254 (571)
+|+...+ .|+. -+...|.|++++|+++++|+.|... ..+.++.||.. +...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl~--~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQ--TESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCB--CSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecccc--ccCC
Confidence 4433110 1222 0124589999999999999999964 55557777743 3222
Q ss_pred CCCCCCeeEeceEEeCCCceEEEEEEeCCC---------CceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCC
Q 039250 255 DAEYTKPFSTDRVMLGPGQTVNVLVTADQP---------IGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALP 325 (571)
Q Consensus 255 DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~---------~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p 325 (571)
| ...+.||+++...+...+. +|.||.+++.....+ ...+ ..+.|.+..... +.
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q--~~~G--L~G~liV~~~~~----l~ 906 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD--LYSG--LIGPLIVCRRPY----LK 906 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH--HHTT--CEEEEEEECCC-------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh--hhcc--ccceeEecCccc----cc
Confidence 2 1256799998777776542 269999988642111 0112 233333322110 00
Q ss_pred CCCCCCCCccchhhhcccCccCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEe--ecceeecC-C-C
Q 039250 326 ATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAAS--MNNISFIK-P-N 401 (571)
Q Consensus 326 ~~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--in~~~~~~-p-~ 401 (571)
+. ..+ .+..+.+.+..... + ..|+ .|+.+|.. | .
T Consensus 907 ---~~--------------------~~~--~d~D~~l~~~~~d~--------------~---~~~y~~~n~~~~~~~P~~ 944 (1065)
T 2j5w_A 907 ---VF--------------------NPR--RKLEFALLFLVFDE--------------N---ESWYLDDNIKTYSDHPEK 944 (1065)
T ss_dssp -------------------------CCC--CEEEEEEEEEEEEG--------------G---GSTTHHHHHHHHCSCGGG
T ss_pred ---cc--------------------CCC--cceEEEEEEEeecC--------------C---cceeeccCcccccCCccc
Confidence 00 001 12222222111000 0 0111 12222210 1 0
Q ss_pred hhHHhhhhhccCcccccCCCCCCccccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCc
Q 039250 402 VSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGY 481 (571)
Q Consensus 402 ~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~ 481 (571)
.+++...+.. .+..+.++|. .......+.++.|++|+|+|.|.+. ..+.||||||||
T Consensus 945 v~~~~~~~~~------------~~~~~~iNG~----------~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~ 1001 (1065)
T 2j5w_A 945 VNKDDEEFIE------------SNKMHAINGR----------MFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGH 1001 (1065)
T ss_dssp CCTTCHHHHH------------HTEEEEETTB----------CTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSC
T ss_pred cCcchhhhhc------------cCceEEECCc----------cCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEccc
Confidence 1111100000 0000111110 1112355789999999999999752 247899999999
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeCCC
Q 039250 482 NFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGK 555 (571)
Q Consensus 482 ~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 555 (571)
+|+|++++ |.|||||.|+|+++++|+|++||||.|+||||+++|++.|||+.|+|.+..
T Consensus 1002 ~F~vv~~~---------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1002 SFQYKHRG---------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp CEEETTTT---------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred EEEEEecC---------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 99998763 579999999999999999999999999999999999999999999998654
No 26
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.3e-44 Score=370.89 Aligned_cols=136 Identities=25% Similarity=0.434 Sum_probs=108.1
Q ss_pred cCCCcceEEEEEEEEEEEeecCCceee-EEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCC
Q 039250 27 WPRGRSTRFYEFKIQATRVNKLCNAKD-IVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPA 105 (571)
Q Consensus 27 ~~~~~~~~~~~l~i~~~~~~~~g~~~~-~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~ 105 (571)
.+..+++++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+++.. ++||++
T Consensus 42 ~~~~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~ 116 (343)
T 3cg8_A 42 APAGGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA 116 (343)
T ss_dssp ---CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT
T ss_pred cCCCCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc
Confidence 33456789999999975 3443221 12248999999999999999999999999999999999999873 579999
Q ss_pred ccccCcCCCCCeEEEEEEeCC------------CCcceeEeecccc------c-ccceeeEEEEecCCCCCCCCCCCCcc
Q 039250 106 YITQCPIQSGQTFTYEFTMFQ------------QKGTFFWHAHVSW------L-RGTVYGAIVVYPKTGVPYPFQFPYQE 166 (571)
Q Consensus 106 ~~~q~~i~PG~~~~y~~~~~~------------~~Gt~wYH~H~~~------~-~~Gl~G~liV~~~~~~~~~~~~~~~e 166 (571)
++||+|+||++++|+|++.+ ++||||||||.++ + ..||+|++||+++.+. .+|+|
T Consensus 117 -~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e 190 (343)
T 3cg8_A 117 -MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDAT 190 (343)
T ss_dssp -TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred -cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCce
Confidence 88999999999999999832 3599999999743 2 3499999999987653 24678
Q ss_pred EEEEEee
Q 039250 167 HIIILGE 173 (571)
Q Consensus 167 ~~l~~~d 173 (571)
+.++++|
T Consensus 191 ~~l~~~d 197 (343)
T 3cg8_A 191 HTIVFND 197 (343)
T ss_dssp EEEEEET
T ss_pred EEEEccc
Confidence 8777754
No 27
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=6.3e-44 Score=380.44 Aligned_cols=262 Identities=18% Similarity=0.246 Sum_probs=218.4
Q ss_pred CcceEEEEEEEEEEEeec-CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCC--CCeeEEecccccCCCCCCCCCCc
Q 039250 30 GRSTRFYEFKIQATRVNK-LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSP--YNATIHWHGVRQRLSCWFDGPAY 106 (571)
Q Consensus 30 ~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DG~~~ 106 (571)
.+.+++|+|++++..++. +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||++.
T Consensus 25 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~~ 99 (442)
T 2zoo_A 25 HSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGAE 99 (442)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCCc
Confidence 467889999999999985 899999999999999999999999999999999975 599999999874 488876
Q ss_pred cccCcCCCCCeEEEEEEeCCCCcceeEeecccc---c-ccceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHHH
Q 039250 107 ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW---L-RGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQL 182 (571)
Q Consensus 107 ~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~---~-~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 182 (571)
.+ +|+||++++|+|++ +++||||||||.++ + .+||+|+|||++++.. +.+|+|++++++||++......
T Consensus 100 ~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~~ 172 (442)
T 2zoo_A 100 SS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFGE 172 (442)
T ss_dssp GC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTC
T ss_pred cE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCcccc
Confidence 43 69999999999999 88999999998753 2 3599999999977532 2578999999999997653100
Q ss_pred -------HHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeC
Q 039250 183 -------ERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEAD 255 (571)
Q Consensus 183 -------~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~D 255 (571)
.... . ...+++++|||+.... ...+.|++++|++|||||+|+|....+.|+|+||+|+||+.|
T Consensus 173 ~~~~~~~~~~~--~---~~~~~~~liNG~~~~~-----~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 173 AGLQPFDMAKA--I---DEDADYVVFNGSVGST-----TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp CEEECBCHHHH--H---TTCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred cccccCChhHh--c---cCCCCEEEECCCcCCC-----CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 0000 1 1357899999995421 012689999999999999999988889999999999999999
Q ss_pred CCCCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCC
Q 039250 256 AEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQP 319 (571)
Q Consensus 256 G~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 319 (571)
|.+++|..++++.|.||||+||+|++++ +|.|+++|+...... .....++++|.+...
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~~-----~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRAF-----NKGALAMLKVEGPDD 300 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHHH-----TTSCEEEEEEESCCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcCC-CCeEEEEeccccccc-----ccCceEEEEecCCCC
Confidence 9999999999999999999999999986 699999999865521 124689999987654
No 28
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=2.9e-44 Score=358.07 Aligned_cols=239 Identities=21% Similarity=0.328 Sum_probs=197.8
Q ss_pred CCcceEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccc
Q 039250 29 RGRSTRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYIT 108 (571)
Q Consensus 29 ~~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 108 (571)
..+++|+|+|+|++.. .+.....++++||++|||+||+++||+|+|+|+|.++++++|||||+++.. ++||++ ++
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~t 77 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 77 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-CC
Confidence 3578899999999854 233444667899999999999999999999999999999999999999986 479999 89
Q ss_pred cCcCCCCCeEEEEEEeCC------------CCcceeEeeccccc-------ccceeeEEEEecCCCCCCCCCCCCccEEE
Q 039250 109 QCPIQSGQTFTYEFTMFQ------------QKGTFFWHAHVSWL-------RGTVYGAIVVYPKTGVPYPFQFPYQEHII 169 (571)
Q Consensus 109 q~~i~PG~~~~y~~~~~~------------~~Gt~wYH~H~~~~-------~~Gl~G~liV~~~~~~~~~~~~~~~e~~l 169 (571)
||+|+||++++|+|++++ ++||||||||.++. .+||+|+|||+++... ..|+|+++
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l 152 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 152 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEE
Confidence 999999999999999953 37999999999752 3499999999998753 24899999
Q ss_pred EEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCcee
Q 039250 170 ILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKL 249 (571)
Q Consensus 170 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~ 249 (571)
++++ ++|||+.. ...+.|+++.|+++||||+|++. ..+.||||||.|
T Consensus 153 ~l~~-------------------------~~iNG~~~-------~~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f 199 (276)
T 3kw8_A 153 VFND-------------------------MTINNRKP-------HTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRW 199 (276)
T ss_dssp EEET-------------------------TEETTCCT-------TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCE
T ss_pred Eecc-------------------------cccceecc-------cCCCCEEEecCCEEEEEEecCCC-cceeEEEcccee
Confidence 8854 37999954 14589999999999999999997 467799999999
Q ss_pred EEEEeCCCCC----CeeEeceEEeCCCceEEEEEEeCC--CCceeEEEeecccccCCCccCCcceEEEEEEcCC
Q 039250 250 TIVEADAEYT----KPFSTDRVMLGPGQTVNVLVTADQ--PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGA 317 (571)
Q Consensus 250 ~via~DG~~~----~P~~~d~l~l~pgeR~dv~v~~~~--~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (571)
.+++ ||... .+..+|++.|.|||++++++++++ +||.|+++||...... ....+.+.+...
T Consensus 200 ~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~------~GM~g~~~V~~~ 266 (276)
T 3kw8_A 200 ADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSD------MGMVGLFLVKKP 266 (276)
T ss_dssp ESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECT
T ss_pred EEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhh------CCCeEEEEEeCC
Confidence 9875 77543 346899999999999999999985 5899999999754332 134566666543
No 29
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=2.8e-44 Score=364.49 Aligned_cols=241 Identities=20% Similarity=0.322 Sum_probs=199.8
Q ss_pred CCCcceEEEEEEEEEEEeecCCc-eeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCc
Q 039250 28 PRGRSTRFYEFKIQATRVNKLCN-AKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAY 106 (571)
Q Consensus 28 ~~~~~~~~~~l~i~~~~~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 106 (571)
+.++.+++++|.+++. ++|. ...++..||++|||+|||++||+|+|+|+|++++++||||||+++... +||++
T Consensus 8 p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~- 81 (313)
T 3tas_A 8 PAGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK- 81 (313)
T ss_dssp CCCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST-
T ss_pred CCCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc-
Confidence 4456789999988642 4553 345567799999999999999999999999999999999999998764 69998
Q ss_pred cccCcCCCCCeEEEEEEeC------------CCCcceeEeeccccc-------ccceeeEEEEecCCCCCCCCCCCCccE
Q 039250 107 ITQCPIQSGQTFTYEFTMF------------QQKGTFFWHAHVSWL-------RGTVYGAIVVYPKTGVPYPFQFPYQEH 167 (571)
Q Consensus 107 ~~q~~i~PG~~~~y~~~~~------------~~~Gt~wYH~H~~~~-------~~Gl~G~liV~~~~~~~~~~~~~~~e~ 167 (571)
.+||+|+||++++|+|++. .++||||||||..++ .+||+|+|||+++.+. .+|+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccc
Confidence 5899999999999999862 368999999998764 2499999999988753 468999
Q ss_pred EEEEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCc
Q 039250 168 IIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANH 247 (571)
Q Consensus 168 ~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh 247 (571)
+|+++|| ++||+.+ ...+.+.++.|++|||||+|++. ..+.|||+||
T Consensus 157 ~l~~~d~-------------------------t~Ng~~~-------~~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh 203 (313)
T 3tas_A 157 TIVFNDM-------------------------TINNRPA-------HTGPDFEATVGDRVEFVMITHGE-YYHTFHLHGH 203 (313)
T ss_dssp EEEEETT-------------------------EETTCCT-------TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTC
T ss_pred eeeccch-------------------------hcccCCc-------ccccccccccCCEEEEEEecccc-cceeeeecCC
Confidence 9999876 4577644 24478999999999999999995 4667999999
Q ss_pred eeEEEEeCCCCC---CeeEeceEEeCCCceEEEEEEeCC--CCceeEEEeecccccCCCccCCcceEEEEEEcCCC
Q 039250 248 KLTIVEADAEYT---KPFSTDRVMLGPGQTVNVLVTADQ--PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQ 318 (571)
Q Consensus 248 ~~~via~DG~~~---~P~~~d~l~l~pgeR~dv~v~~~~--~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (571)
.|++++.||... .|..+|++.|.||||++++|.+.+ +||.|.++||....... ...+++.++...
T Consensus 204 ~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~~------GM~~~f~V~~~d 273 (313)
T 3tas_A 204 RWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDM------GMVGLFLVKKPD 273 (313)
T ss_dssp CEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHT------TCEEEEEEECTT
T ss_pred eeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHHC------CCeEEEEEECCC
Confidence 999999999776 478999999999999999998764 58999999998654322 356777776543
No 30
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=9.8e-44 Score=357.65 Aligned_cols=240 Identities=20% Similarity=0.262 Sum_probs=195.8
Q ss_pred CCcceEEEEEEEEEEEeecCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccc
Q 039250 29 RGRSTRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYIT 108 (571)
Q Consensus 29 ~~~~~~~~~l~i~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 108 (571)
..+.+++++|.+++..... ..+.++.+||++|||+|||++||+|+|+|+|.+++++||||||+++... +||++ ++
T Consensus 25 ~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~~ 99 (299)
T 3t9w_A 25 AQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-MN 99 (299)
T ss_dssp --CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-TT
T ss_pred cCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-cc
Confidence 3467899999999764221 3344556799999999999999999999999999999999999998754 69997 78
Q ss_pred cCcCCCCCeEEEEEEeC------------CCCcceeEeecccccc-------cceeeEEEEecCCCCCCCCCCCCccEEE
Q 039250 109 QCPIQSGQTFTYEFTMF------------QQKGTFFWHAHVSWLR-------GTVYGAIVVYPKTGVPYPFQFPYQEHII 169 (571)
Q Consensus 109 q~~i~PG~~~~y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~l 169 (571)
||+|+||++|+|+|+++ .++||||||||.+++. +||+|+|||+++.+. .+|+|+++
T Consensus 100 ~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~l 174 (299)
T 3t9w_A 100 GSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFTV 174 (299)
T ss_dssp TCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccccee
Confidence 99999999999999984 2689999999987642 399999999988753 46899999
Q ss_pred EEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCcee
Q 039250 170 ILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKL 249 (571)
Q Consensus 170 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~ 249 (571)
++++| .+||+.. ...+.+.++.|+++||||+|++... +.|||+||.|
T Consensus 175 ~~~~~-------------------------~~Ng~~~-------~~~p~l~v~~Ge~Vr~~liN~~~~~-HpfHlHGh~F 221 (299)
T 3t9w_A 175 VFNDM-------------------------MINNRAH-------HDAPTFEANLGERVEWIAIGHGSNF-HTFHLHGHRW 221 (299)
T ss_dssp EEETT-------------------------EETTCCT-------TCCCEEEEETTCEEEEEEEEESSCC-CEEEETTCCE
T ss_pred eeeee-------------------------eecCccc-------cccccceecCCCEEEEEEEeccccc-eeeeEecceE
Confidence 98654 3687743 2458899999999999999999654 5699999999
Q ss_pred EEEEeCCCCC---CeeEeceEEeCCCceEEEEEEeCC--CCceeEEEeecccccCCCccCCcceEEEEEEcCC
Q 039250 250 TIVEADAEYT---KPFSTDRVMLGPGQTVNVLVTADQ--PIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGA 317 (571)
Q Consensus 250 ~via~DG~~~---~P~~~d~l~l~pgeR~dv~v~~~~--~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (571)
+++..|+... .+..+|++.|.||||++++|.+.+ +||.|+++||....... ...+++.+...
T Consensus 222 ~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~~------GM~~~f~V~~~ 288 (299)
T 3t9w_A 222 LDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSDM------GMAGMFLVRNA 288 (299)
T ss_dssp ESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHHT------TCEEEEEEECT
T ss_pred EEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHhc------CCeEEEEEECC
Confidence 9999998776 345789999999999999987654 48999999998654322 35677776654
No 31
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=5.7e-43 Score=358.99 Aligned_cols=265 Identities=17% Similarity=0.188 Sum_probs=209.6
Q ss_pred CCcceEEEEEEEEEEEeec-CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCcc
Q 039250 29 RGRSTRFYEFKIQATRVNK-LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYI 107 (571)
Q Consensus 29 ~~~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 107 (571)
+.+++++|+|++++..+++ +|.++.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.....+||.+++
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~ 104 (333)
T 1mzy_A 28 SGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGL 104 (333)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCce
Confidence 3467899999999999887 5999999999999999999999999999999999 47899999998875445666666
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEeecccc-----cc-cceeeEEEEecCCCCC----CCCCCCCccEEEEEeeEeec
Q 039250 108 TQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW-----LR-GTVYGAIVVYPKTGVP----YPFQFPYQEHIIILGEYWLQ 177 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~~ 177 (571)
++ |+||++++|+|++ +++||||||||.++ +. +||+|++||++++... .+. .+|+|++++++||++.
T Consensus 105 ~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 105 TL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYIP 180 (333)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCC
T ss_pred eE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeeccC
Confidence 64 9999999999999 78999999999974 33 4999999999765422 122 5689999999999883
Q ss_pred c--HH---------HHHH---HHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEE
Q 039250 178 D--VV---------QLER---QVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFA 243 (571)
Q Consensus 178 ~--~~---------~~~~---~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~ 243 (571)
. .. ..+. ..+ .+ ..++.++|||+.++.. ..+.+++++|++||||++|++....+ ..
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~ 250 (333)
T 1mzy_A 181 KDEDGTYMRFSDPSEGYEDMVAVM-DT---LIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HL 250 (333)
T ss_dssp BCTTSCBCCCSSHHHHHHHHHHHH-TT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EE
T ss_pred ccccccccccccccccccchhHHh-hc---cCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EE
Confidence 1 11 0000 111 11 4578999999965211 14679999999988877776654444 34
Q ss_pred EcCceeEEEEeCCCCCC-ee-EeceEEeCCCceEEEEEEeCCCCceeEEEeeccccc-CCCccCCcceEEEEEEcCCC
Q 039250 244 IANHKLTIVEADAEYTK-PF-STDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSA-QGVSFQNISAIAYFQYLGAQ 318 (571)
Q Consensus 244 i~gh~~~via~DG~~~~-P~-~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~-~~~~~~~~~~~ail~y~~~~ 318 (571)
+++|.++|++ ||.+++ |. .+|++.|.||||+||+|++++ +|+|+++||..... . ....++++|.+..
T Consensus 251 i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~~~------~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 251 IGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAVH------KGATAHVLVEGEW 320 (333)
T ss_dssp ETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHT------TCCEEEEEEESCC
T ss_pred ECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhHhh------CCCEEEEEEcCCC
Confidence 8899999999 999995 44 589999999999999999996 69999999986542 2 2467899998753
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=6.6e-42 Score=351.65 Aligned_cols=268 Identities=19% Similarity=0.242 Sum_probs=202.9
Q ss_pred CcceEEEEEEEEEEEee--cCCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCcc
Q 039250 30 GRSTRFYEFKIQATRVN--KLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYI 107 (571)
Q Consensus 30 ~~~~~~~~l~i~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 107 (571)
.+.+++|+|++++..++ +||..+.+|+|||++|||+|+|++||+|+|+|+|.++ ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 45789999999999876 4599999999999999999999999999999999963 356666665555556777766
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEeeccccc-----ccceeeEEEEecCCCCCCCC---CCCCccEEEEEeeEeeccH
Q 039250 108 TQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWL-----RGTVYGAIVVYPKTGVPYPF---QFPYQEHIIILGEYWLQDV 179 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~-----~~Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~~ 179 (571)
++ |+||++++|+|++ +++||||||||.++. .+||+|+|||++++....+. ..+|+|++|+++||++...
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~ 182 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKG 182 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccc
Confidence 65 9999999999999 789999999999752 35999999999865422111 1468999999999987411
Q ss_pred --HHH---------HHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEE-EEEcCc
Q 039250 180 --VQL---------ERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENF-FAIANH 247 (571)
Q Consensus 180 --~~~---------~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~-~~i~gh 247 (571)
..+ ....... .....++.++|||+.+.. . ..+.+++++|++||| +|++..+.+. +.|+||
T Consensus 183 ~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~-~----~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh 254 (336)
T 1oe1_A 183 PDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGAL-T----GANALTAKVGETVLL--IHSQANRDTRPHLIGGH 254 (336)
T ss_dssp TTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTT-S----GGGCEEEETTCEEEE--EEEESSSCBCEEETTCC
T ss_pred cCCceeecccccccccchhhH-hhcCCCCEEEECCeeccC-C----CCcceEcCCCCEEEE--EecCCCCccceEEECCc
Confidence 000 0000000 001357899999996421 1 138899999997765 5665555444 456999
Q ss_pred eeEEEEeCCCCCCee--EeceEEeCCCceEEEEEEeCCCCceeEEEeeccccc-CCCccCCcceEEEEEEcCCCC
Q 039250 248 KLTIVEADAEYTKPF--STDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSA-QGVSFQNISAIAYFQYLGAQP 319 (571)
Q Consensus 248 ~~~via~DG~~~~P~--~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~-~~~~~~~~~~~ail~y~~~~~ 319 (571)
.|+|++ ||.+++|. .++++.|.||||+||+|++++ +|.|+++|+..... . ....++++|.+...
T Consensus 255 ~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~~~------~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 255 GDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFE------LGAAGHIKVEGKWN 321 (336)
T ss_dssp EEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHT------TSCEEEEEEESCCC
T ss_pred CceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcccc------CCCeEEEEECCCCC
Confidence 999997 99999653 479999999999999999997 69999999986432 1 24679999987643
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.3e-41 Score=350.11 Aligned_cols=268 Identities=16% Similarity=0.245 Sum_probs=205.3
Q ss_pred CcceEEEEEEEEEEEeec--CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCcc
Q 039250 30 GRSTRFYEFKIQATRVNK--LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYI 107 (571)
Q Consensus 30 ~~~~~~~~l~i~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 107 (571)
.+.+++|+|++++..+++ ||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++......||...+
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~~ 111 (340)
T 2bw4_A 35 GPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGAL 111 (340)
T ss_dssp SCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCccc
Confidence 457899999999999885 49999999999999999999999999999999998 6789999987765434454555
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEeecccc----c-ccceeeEEEEecCCCCC----CCCCCCCccEEEEEeeEeec-
Q 039250 108 TQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW----L-RGTVYGAIVVYPKTGVP----YPFQFPYQEHIIILGEYWLQ- 177 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~----~-~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~~- 177 (571)
++ |.||++++|+|++ .++||||||||.++ + .+||+|+|||++++... .+. .+|+|++++++||++.
T Consensus 112 ~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~ 187 (340)
T 2bw4_A 112 TQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVPK 187 (340)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCCB
T ss_pred eE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeecc
Confidence 54 9999999999999 78999999999974 2 35999999999865321 122 4688999999999973
Q ss_pred -cHH---------HHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCc
Q 039250 178 -DVV---------QLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANH 247 (571)
Q Consensus 178 -~~~---------~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh 247 (571)
... ......... .....++.++|||+.+.. ...+.+++++|+++||++.|++...++ .++++|
T Consensus 188 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~-----~~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i~gh 260 (340)
T 2bw4_A 188 DEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL-----TGDHALTAAVGERVLVVHSQANRDTRP-HLIGGH 260 (340)
T ss_dssp CTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESSSCBCE-EEETCC
T ss_pred ccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc-----cCCCceEcCCCCEEEEEECCCCCccce-EEecCc
Confidence 110 011000000 001356899999996421 014889999999888777766544444 458999
Q ss_pred eeEEEEeCCCCCC-ee-EeceEEeCCCceEEEEEEeCCCCceeEEEeeccc-ccCCCccCCcceEEEEEEcCCCC
Q 039250 248 KLTIVEADAEYTK-PF-STDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYM-SAQGVSFQNISAIAYFQYLGAQP 319 (571)
Q Consensus 248 ~~~via~DG~~~~-P~-~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~-~~~~~~~~~~~~~ail~y~~~~~ 319 (571)
.|+|++ ||.++. |. .++++.|.||||+||+|++++ +|.|+++|+... ... ....++++|.+...
T Consensus 261 ~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~~------~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 261 GDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFE------LGAAGHFKVTGEWN 327 (340)
T ss_dssp EEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHT------TSCEEEEEEESCCC
T ss_pred ceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHHh------CCCEEEEEECCCCc
Confidence 999997 999884 43 589999999999999999997 699999999863 211 13568899987543
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=7.4e-40 Score=364.33 Aligned_cols=250 Identities=16% Similarity=0.187 Sum_probs=185.1
Q ss_pred cceEEEEEEEEEEEeecC--C------------ceeeE--EEE----------------CCcCCCceEEEecCCEEEEEE
Q 039250 31 RSTRFYEFKIQATRVNKL--C------------NAKDI--VTV----------------NNMFPGPVVYAQEDDRIIVKV 78 (571)
Q Consensus 31 ~~~~~~~l~i~~~~~~~~--g------------~~~~~--~~~----------------Ng~~pgP~i~v~~Gd~v~v~v 78 (571)
+++|+|.+.|++..+... | +-.++ ..| ++++|||+|||++||+|+|+|
T Consensus 4 ~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~~ 83 (647)
T 1sdd_B 4 GNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVRF 83 (647)
T ss_dssp CCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEEE
T ss_pred CCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEEE
Confidence 578999999999987754 1 11111 223 447899999999999999999
Q ss_pred EeCCCCCeeEEecccccCCCCCCCCCCccc--------cCcCCCCCeEEEEEEeCCC-----Cc----ceeEeeccccc-
Q 039250 79 TNQSPYNATIHWHGVRQRLSCWFDGPAYIT--------QCPIQSGQTFTYEFTMFQQ-----KG----TFFWHAHVSWL- 140 (571)
Q Consensus 79 ~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~--------q~~i~PG~~~~y~~~~~~~-----~G----t~wYH~H~~~~- 140 (571)
+|.++++++|||||+++.. .|||+|+++ ||+|+||++++|+|+++++ +| |||||||.+..
T Consensus 84 ~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~~ 161 (647)
T 1sdd_B 84 KNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEK 161 (647)
T ss_dssp CCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHH
T ss_pred EECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCcc
Confidence 9999999999999999975 479999876 9999999999999999654 57 99999999742
Q ss_pred --ccceeeEEEEecCCCCCC--CCCCCCccEEEEEe------eEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCC
Q 039250 141 --RGTVYGAIVVYPKTGVPY--PFQFPYQEHIIILG------EYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYN 210 (571)
Q Consensus 141 --~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~ 210 (571)
.+||+|+|||+++..... ..+..++|++|+++ ||+++.......... .......++.++|||+..
T Consensus 162 q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~iNG~~~---- 236 (647)
T 1sdd_B 162 DIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA-SSEVKNSHEFHAINGMIY---- 236 (647)
T ss_dssp HHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS----
T ss_pred cccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC-CcchhhcCceeccCCEec----
Confidence 359999999998765321 12334689999999 677654322100000 111223578999999953
Q ss_pred CCCCCeeEEEEeCCCEEEEEEeecCccc-eEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCCCCceeE
Q 039250 211 CSANDVYKIEVVPGKTYLLRLINAGLNM-ENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYS 289 (571)
Q Consensus 211 ~~~~~~p~l~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~ 289 (571)
..|.+++++|++|||||+|++... .+.||||||.|++++.|| ..+|++.|.||||+||+|++++ +|.|+
T Consensus 237 ----~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~-pG~w~ 306 (647)
T 1sdd_B 237 ----NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASK-PGWWL 306 (647)
T ss_dssp ----CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCS-SEEEE
T ss_pred ----CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEecc-ceEee
Confidence 248899999999999999999764 788999999999999886 5889999999999999999986 69999
Q ss_pred EEeecccc
Q 039250 290 MAMGPYMS 297 (571)
Q Consensus 290 i~~~~~~~ 297 (571)
++||....
T Consensus 307 ~hch~~~h 314 (647)
T 1sdd_B 307 LDTEVGEI 314 (647)
T ss_dssp EECCCHHH
T ss_pred cccCcccc
Confidence 99998544
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.4e-41 Score=343.79 Aligned_cols=216 Identities=17% Similarity=0.233 Sum_probs=159.8
Q ss_pred eeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCcc------c--cCcCCCCCeEEEEEE
Q 039250 52 KDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYI------T--QCPIQSGQTFTYEFT 123 (571)
Q Consensus 52 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~------~--q~~i~PG~~~~y~~~ 123 (571)
++.+++| ++|||+|+|++||+|+|+|+|.++++++|||||++.... +||++.. + ||+|+||++++|+|+
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~ 125 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWI 125 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEE
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEE
Confidence 4445688 689999999999999999999999999999999996543 3666543 3 799999999999999
Q ss_pred eCCC---------CcceeEeeccccc---ccceeeEEEEecCCCCCC-CC-CCCCccEEEEEeeEeeccHHHHHHHHhhC
Q 039250 124 MFQQ---------KGTFFWHAHVSWL---RGTVYGAIVVYPKTGVPY-PF-QFPYQEHIIILGEYWLQDVVQLERQVLAS 189 (571)
Q Consensus 124 ~~~~---------~Gt~wYH~H~~~~---~~Gl~G~liV~~~~~~~~-~~-~~~~~e~~l~~~d~~~~~~~~~~~~~~~~ 189 (571)
++++ +||||||||.... .+||+|+|||+++..... +. ...|+|++++++||.... ..
T Consensus 126 ~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~ 196 (306)
T 1sdd_A 126 ISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SW 196 (306)
T ss_dssp CCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SS
T ss_pred eCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------cc
Confidence 9544 3799999998763 249999999998753211 11 146789999999984211 01
Q ss_pred CCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCcc-ceEEEEEcCceeEEEEeCCCCCCeeEeceEE
Q 039250 190 GGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLN-MENFFAIANHKLTIVEADAEYTKPFSTDRVM 268 (571)
Q Consensus 190 g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~d~l~ 268 (571)
....++.++|||+.. ...|.+++++|+++||||+|++.. ..+.|||+||.|.+ || ..+|++.
T Consensus 197 --~~~~~~~~~ING~~~-------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~ 259 (306)
T 1sdd_A 197 --NQTSSLMYTVNGYVN-------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAIT 259 (306)
T ss_dssp --SCCCCEEECSSSCCS-------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCC
T ss_pred --ccCCCcceeeCCEec-------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEE
Confidence 112467899999953 134789999999999999999987 56679999999986 77 4689999
Q ss_pred eCCCceEEEEEEeCCCCceeEEEeecccc
Q 039250 269 LGPGQTVNVLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 269 l~pgeR~dv~v~~~~~~g~~~i~~~~~~~ 297 (571)
|.||||+||+|++++ +|.|+++|+....
T Consensus 260 l~pger~~v~~~~~~-pG~~~~hch~~~H 287 (306)
T 1sdd_A 260 LVSATSTTANMTVSP-EGRWTIASLIPRH 287 (306)
T ss_dssp EETTCCBC---------CCCCCBCCSTTT
T ss_pred ECCCcEEEEEEEcCC-CeEEEEEeCChHH
Confidence 999999999999985 6999999997544
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.5e-38 Score=336.81 Aligned_cols=259 Identities=17% Similarity=0.264 Sum_probs=209.2
Q ss_pred cceEEEEEEEEEEEeec-CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCC--CCeeEEecccccCCCCCCCCCCcc
Q 039250 31 RSTRFYEFKIQATRVNK-LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSP--YNATIHWHGVRQRLSCWFDGPAYI 107 (571)
Q Consensus 31 ~~~~~~~l~i~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~ 107 (571)
+..+.|+|++++..... +|....+|+|||++|||+|++++||+++|+|+|.++ ..++|||||+.. +||++..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 45678888887777666 588999999999999999999999999999999975 679999999852 4999865
Q ss_pred ccCcCCCCCeEEEEEEeCCCCcceeEeecccc----cccceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHH--
Q 039250 108 TQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW----LRGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQ-- 181 (571)
Q Consensus 108 ~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 181 (571)
++ |.||++++|.|++ +++||||||||.+. ...||+|+|+|+++.. ++.+|+|++++++||++.....
T Consensus 236 ~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 TQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp CC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 44 9999999999999 78899999999752 2359999999997653 2357889999999998653100
Q ss_pred -----HHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCC
Q 039250 182 -----LERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADA 256 (571)
Q Consensus 182 -----~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG 256 (571)
...... + ..++.++|||+..... ..+.+++++|++|||||+|++....+.|||+||.|+||+.||
T Consensus 309 g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~-----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG 378 (447)
T 2dv6_A 309 GEQEMDYEKLI--N---EKPEYFLFNGSVGSLT-----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLG 378 (447)
T ss_dssp EECCBBHHHHH--T---TCCSEEEETTSTTCCC-----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGG
T ss_pred ccccCChHHhh--c---cCCCEEEECCcccCCC-----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCC
Confidence 001111 1 2467899999965211 125799999999999999999888889999999999999999
Q ss_pred CCCC-ee-EeceEEeCCCceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCC
Q 039250 257 EYTK-PF-STDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQ 318 (571)
Q Consensus 257 ~~~~-P~-~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (571)
.++. |. .+|++.|.||||++|+|++++ ||.|+++|+...... ....++++|.+..
T Consensus 379 ~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG~~~~hch~~~h~~------~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 379 SVVSPPLIGVQTVSVPPGGATIVDFKIDR-AGRYILVDHALSRLE------HGLVGFLNVDGPK 435 (447)
T ss_dssp CSSSCCEEEESEEEECTTEEEEEEEECCS-CEEEEEEESSGGGGG------GTCCEEEEECSCS
T ss_pred cccCCCcccccEEEECCCcEEEEEEECCC-CEEEEEEecCcCccc------cCCEEEEEEeCCC
Confidence 9985 44 689999999999999999985 799999999865432 2357999998753
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1e-39 Score=365.17 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=195.1
Q ss_pred CcceEEEEEEEEEEEe--ecCCc---------------eeeE--EEE-C----C-----------cCCCceEEEecCCEE
Q 039250 30 GRSTRFYEFKIQATRV--NKLCN---------------AKDI--VTV-N----N-----------MFPGPVVYAQEDDRI 74 (571)
Q Consensus 30 ~~~~~~~~l~i~~~~~--~~~g~---------------~~~~--~~~-N----g-----------~~pgP~i~v~~Gd~v 74 (571)
.+.+|+|.|.|++..+ ++++. .+++ +.| | + ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 4689999999999985 45543 1222 222 2 2 689999999999999
Q ss_pred EEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCC---------CCcceeEeeccccc---cc
Q 039250 75 IVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQ---------QKGTFFWHAHVSWL---RG 142 (571)
Q Consensus 75 ~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~---------~~Gt~wYH~H~~~~---~~ 142 (571)
+|+|+|.++++++|||||+++..... ||+++ +||+|+||++|+|+|++++ ++||||||||.+.. .+
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 99999999999999999999998873 69998 8999999999999999953 89999999999874 25
Q ss_pred ceeeEEEEecCCCCCC--CCCCCCccEEEEEee------EeeccHHHHHHHHhh-CC-------CCCCCCCcEEEcCccC
Q 039250 143 TVYGAIVVYPKTGVPY--PFQFPYQEHIIILGE------YWLQDVVQLERQVLA-SG-------GAPPPSNAYTINGHPG 206 (571)
Q Consensus 143 Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g-------~~~~~~~~~~iNG~~~ 206 (571)
||+|+|||+++..... ..+..++|++|++++ |+++.... .... .. ......+.++|||+..
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccCCccC
Confidence 9999999998865321 112467899888754 44432110 0000 00 0011235689999953
Q ss_pred CCCCCCCCCeeEEEEeCCCEEEEEEeecCcc-ceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCCCC
Q 039250 207 PNYNCSANDVYKIEVVPGKTYLLRLINAGLN-MENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPI 285 (571)
Q Consensus 207 ~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~~ 285 (571)
...+.+++++|++|||||+|++.. ..+.||||||.|+|++.||. .+|++.|.||||++|+|++++ |
T Consensus 365 -------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~-p 431 (770)
T 2r7e_B 365 -------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK-A 431 (770)
T ss_dssp -------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS-C
T ss_pred -------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC-C
Confidence 145789999999999999999865 36789999999999999974 899999999999999999985 6
Q ss_pred ceeEEEeeccc
Q 039250 286 GKYSMAMGPYM 296 (571)
Q Consensus 286 g~~~i~~~~~~ 296 (571)
|.|+++||...
T Consensus 432 G~w~~hcH~~~ 442 (770)
T 2r7e_B 432 GIWRVECLIGE 442 (770)
T ss_dssp BCCCBCCCSHH
T ss_pred CceEEEecccc
Confidence 99999999753
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.9e-36 Score=338.25 Aligned_cols=219 Identities=17% Similarity=0.265 Sum_probs=169.6
Q ss_pred CcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCC-----CCCccccCcCCCCCeEEEEEEeCCCCc----
Q 039250 59 NMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFD-----GPAYITQCPIQSGQTFTYEFTMFQQKG---- 129 (571)
Q Consensus 59 g~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~D-----G~~~~~q~~i~PG~~~~y~~~~~~~~G---- 129 (571)
..+|||+||+++||+|+|+|+|.++++++|||||+++. ..|+| |+++++||+|+||++|+|+|++++++|
T Consensus 447 ~g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 447 SGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp SCSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred cCCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 36899999999999999999999999999999999985 45566 456788999999999999999965554
Q ss_pred -----ceeEeecccccc---cceeeEEEEecCCCCC-CC-CCCCCccEEEEEee------EeeccHHHHHHHHhhC-CCC
Q 039250 130 -----TFFWHAHVSWLR---GTVYGAIVVYPKTGVP-YP-FQFPYQEHIIILGE------YWLQDVVQLERQVLAS-GGA 192 (571)
Q Consensus 130 -----t~wYH~H~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~-g~~ 192 (571)
|||||||.+.++ .||+|+|||+++.... .. ....|+|++|++++ |++..... .+... ...
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~---~~~~~p~~v 602 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQ---RFLPNPAGV 602 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHH---HHSSSSSCS
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchh---hcccCchhc
Confidence 999999998753 4999999999875321 11 12568999999964 54432211 11100 000
Q ss_pred -------CCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCcc-ceEEEEEcCceeEEEEeCCCCCCeeEe
Q 039250 193 -------PPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLN-MENFFAIANHKLTIVEADAEYTKPFST 264 (571)
Q Consensus 193 -------~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~ 264 (571)
......++|||+.. + ..+ +.+++|++|||||+|++.. ..+.|||+||+|+|+ |..+
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~----~---~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~ 666 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVF----D---SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYE 666 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCS----S---CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSB
T ss_pred ccccccccccCceeeecCcCC----C---CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccce
Confidence 00113578999953 1 223 8999999999999998764 457899999999986 5789
Q ss_pred ceEEeCCCceEEEEEEeCCCCceeEEEeeccccc
Q 039250 265 DRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSA 298 (571)
Q Consensus 265 d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~ 298 (571)
|++.|.||||++|+|++++ ||.|+++||.....
T Consensus 667 Dtv~l~Pg~~~~v~~~ad~-pG~w~~hcH~~~H~ 699 (742)
T 2r7e_A 667 DTLTLFPFSGETVFMSMEN-PGLWILGCHNSDFR 699 (742)
T ss_dssp CSSCCCCCSSEECCEECCC-CCCSCCEECCCSTT
T ss_pred eEEEECCCcEEEEEEEcCC-CeEEEEEeCCchHH
Confidence 9999999999999999985 69999999986543
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=6.7e-29 Score=248.68 Aligned_cols=234 Identities=17% Similarity=0.156 Sum_probs=166.4
Q ss_pred CCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceE
Q 039250 196 SNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTV 275 (571)
Q Consensus 196 ~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~ 275 (571)
...+++||+. ..|.|+++.|+++++|+.|.... ...+|+||.. ..+.||.+. .+...+.||+++
T Consensus 54 ~~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRI---------PGPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEE
T ss_pred EEEEEECCcc---------CCCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEE
Confidence 4589999984 34899999999999999999854 4569999976 457899754 245678999999
Q ss_pred EEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCcc
Q 039250 276 NVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKE 355 (571)
Q Consensus 276 dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~~ 355 (571)
+..++++ .+|.||.|||....... ...+ ..+.+.+.... ..+ .
T Consensus 118 ~y~f~~~-~~Gt~~yH~H~~~~~~~-~~~G--l~G~liV~~~~--------~~~-------------------------~ 160 (288)
T 3gdc_A 118 TYEFDAT-PFGTHLYHCHQSPLAPH-IAKG--LYGGFIVEPKE--------GRP-------------------------P 160 (288)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHHH-HHTT--CEEEEEEECSS--------CCC-------------------------C
T ss_pred EEEEEcC-CCccEEEEecCcchHHH-HhCc--CeEEEEEeCCc--------cCC-------------------------C
Confidence 9999996 57999999998531100 0112 23333333210 000 1
Q ss_pred CceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCCC
Q 039250 356 IDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAP 435 (571)
Q Consensus 356 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~ 435 (571)
.++++.+.++.-..+ + ......|.+||+.|..
T Consensus 161 ~d~e~~l~~~d~~~~--------~----g~~~~~~~iNG~~~~~------------------------------------ 192 (288)
T 3gdc_A 161 ADDEMVMVMNGYNTD--------G----GDDNEFYSVNGLPFHF------------------------------------ 192 (288)
T ss_dssp CSEEEEEEEEEECCS--------S----TTCCSEEEETTSTTHH------------------------------------
T ss_pred CcceEEEEEeeEecC--------C----CCCcceEEECcccccc------------------------------------
Confidence 234444443321100 0 0112357888875420
Q ss_pred CCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCC
Q 039250 436 NNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPV 515 (571)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp 515 (571)
....+.++.|++++|.+.|.+. ..+.|||||||+.|+|++.+.. +..|.++||+.|+|
T Consensus 193 -----------~~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~----------~~~~~~~Dtv~v~p 250 (288)
T 3gdc_A 193 -----------MDFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM----------LTPSEYTDTISQVQ 250 (288)
T ss_dssp -----------HHSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC----------SSCSEEESEEEEET
T ss_pred -----------cCcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc----------cCCCceeeEEEeCC
Confidence 0123578899999999999752 1246999999999999985421 23457999999999
Q ss_pred CcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEe
Q 039250 516 GGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 516 ~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|+.+.|+|++++||.|+||||+++|++.|||+.|+|.
T Consensus 251 g~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 251 GQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVS 287 (288)
T ss_dssp TCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEE
T ss_pred CceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEe
Confidence 9999999999999999999999999999999999986
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=2.1e-27 Score=243.31 Aligned_cols=247 Identities=19% Similarity=0.175 Sum_probs=161.3
Q ss_pred CCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEe---CCCCCCeeEeceEEeCCC
Q 039250 196 SNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEA---DAEYTKPFSTDRVMLGPG 272 (571)
Q Consensus 196 ~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~---DG~~~~P~~~d~l~l~pg 272 (571)
...+++||+. +.|.|++++|+++|+||+|.+... .++|.|| +.+.+. ||.+. ++...|.||
T Consensus 23 ~~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~~~-~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG 86 (339)
T 2zwn_A 23 YKVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTSLP-HTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAG 86 (339)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEEESSSC-BCCEEET--CCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEEECCcc---------CCCeEEEECCCEEEEEEEECCCCC-ccEEeCC--CCcCCCcccCCCCc----cccCccCCC
Confidence 4578999993 239999999999999999998643 3455554 556664 99753 345679999
Q ss_pred ceEEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCC
Q 039250 273 QTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPV 352 (571)
Q Consensus 273 eR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~ 352 (571)
||+++.+++++ +|+||+||+.....+. ...++.+ +++ ...... . .+
T Consensus 87 ~~~~y~f~~~~-~Gt~wyH~H~~~~~q~-~~~Gl~G-~li-V~p~~~-----~-~~------------------------ 132 (339)
T 2zwn_A 87 DSYTYKFKADR-IGTLWYHCHVNVNEHV-GVRGMWG-PLI-VDPKQP-----L-PI------------------------ 132 (339)
T ss_dssp CEEEEEEECCS-CEEEEEECCSSHHHHT-TTSCCEE-EEE-EECSSC-----C-TT------------------------
T ss_pred CeEEEEEECCC-CEEEEEEecCCchhhh-hcCCceE-eEE-ecCCCc-----c-cc------------------------
Confidence 99999999984 7999999986431110 0022222 222 221100 0 00
Q ss_pred CccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCC
Q 039250 353 PKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVN 432 (571)
Q Consensus 353 p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~ 432 (571)
+...++.+.+.++.-...... .... ..........|.+||+.+.
T Consensus 133 ~~~~d~e~~l~l~d~~~~~~~-~~~~-~g~~~~~~~~~~ING~~~~---------------------------------- 176 (339)
T 2zwn_A 133 EKRVTKDVIMMMSTWESAVAD-KYGE-GGTPMNVADYFSVNAKSFP---------------------------------- 176 (339)
T ss_dssp GGGCSEEEEEEEEEECGGGTT-CTTC-CCSTTSCCCEEEETTBCTT----------------------------------
T ss_pred cccCCceEEEEeeheeccccc-ccCC-CCCCccccceEEEccccCC----------------------------------
Confidence 001123333322210000000 0000 0000001124566665321
Q ss_pred CCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEE
Q 039250 433 GAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIG 512 (571)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~ 512 (571)
....+.++.|++++|+|.|.+. ..||||||||+|+|++.+... ..+|.++||+.
T Consensus 177 --------------~~~~~~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~DG~~---------~~~p~~~dtv~ 230 (339)
T 2zwn_A 177 --------------LTQPLRVKKGDVVKIRFFGAGG---GIHAMHSHGHDMLVTHKDGLP---------LDSPYYADTVL 230 (339)
T ss_dssp --------------SSCCEEECTTCEEEEEEEECSS---SCEEEEETTCCEEEEEETTEE---------EEEEEEESEEE
T ss_pred --------------CcccEEECCCCEEEEEEEeCCC---ceEEEEECCcEEEEEEeCCee---------cCCCcEEEEEE
Confidence 1134678899999999999763 699999999999999985321 23477899999
Q ss_pred eCCCcEEEEEEEecCceeeEEeeechhh------hhcccEEEEEEeCC
Q 039250 513 VPVGGWAAIRFTADNPGVWFMHCHFDIH------QSWGLGTVLIVKNG 554 (571)
Q Consensus 513 vpp~g~~~irf~adnpG~w~~HCHil~H------~d~GM~~~~~V~~~ 554 (571)
|+||+++.|+|++++||.|++|||+++| ++.|||+.+.+...
T Consensus 231 l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 231 VSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp ECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred ECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 9999999999999999999999999999 88999999998643
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=1.6e-27 Score=241.56 Aligned_cols=249 Identities=17% Similarity=0.205 Sum_probs=166.2
Q ss_pred CcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeE-EEEeCCCCCCeeEeceEEeCCCceE
Q 039250 197 NAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLT-IVEADAEYTKPFSTDRVMLGPGQTV 275 (571)
Q Consensus 197 ~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~-via~DG~~~~P~~~d~l~l~pgeR~ 275 (571)
..+++||+. +.|.|+++.|+++++|+.|... ...++|+||.... ..+.||.+- +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 578999983 3499999999999999999985 4456999998654 236899743 234578999999
Q ss_pred EEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCcc
Q 039250 276 NVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKE 355 (571)
Q Consensus 276 dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~~ 355 (571)
+..+++++ +|+||.|||....... ...++ .+.|....... .+ .+ ..
T Consensus 89 ~y~f~~~~-~Gt~wYH~H~~~~~~~-~~~Gl--~G~lIV~~~~~----~~--~~------------------------~~ 134 (318)
T 3g5w_A 89 TYKFKAEP-AGTMWYHCHVNVNEHV-TMRGM--WGPLIVEPKNP----LP--IE------------------------KT 134 (318)
T ss_dssp EEEEECCS-CEEEEEECCSSHHHHH-HHSCC--EEEEEEECSSC----CH--HH------------------------HT
T ss_pred EEEEEcCC-CEEEEEEccCChhhhh-ccCCC--EEEEEEcCCCc----cc--cc------------------------cc
Confidence 99999975 6999999997321100 01222 23333332110 00 00 01
Q ss_pred CceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCCC
Q 039250 356 IDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAP 435 (571)
Q Consensus 356 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~ 435 (571)
.++.+.+.++.-...... .......+....-.|.|||+.|.
T Consensus 135 ~d~e~~l~l~dw~~~~~~--~~~~~~~~~~~~d~~~ING~~~~------------------------------------- 175 (318)
T 3g5w_A 135 VTKDYILMLSDWVSSWAN--KPGEGGIPGDVFDYYTINAKSFP------------------------------------- 175 (318)
T ss_dssp CCEEEEEEEEEECGGGTT--CTTCCCCTTCCCCEEEETTBCBT-------------------------------------
T ss_pred ccceeEEEEEeecccccc--ccccCCCCCCcCcEEEEcCcCCC-------------------------------------
Confidence 233333322211000000 00000000011124677776531
Q ss_pred CCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCC
Q 039250 436 NNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPV 515 (571)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp 515 (571)
.+..+.++.|++++|+|.|.+. ..||||||||.|+|++++.+. +.+|.++||+.|+|
T Consensus 176 -----------~~~~l~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~dG~~---------~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 176 -----------ETQPIRVKKGDVIRLRLIGAGD---HVHAIHTHGHISQIAFKDGFP---------LDKPIKGDTVLIGP 232 (318)
T ss_dssp -----------SSCCEEECTTCEEEEEEEECSS---SCEEEEETTSCEEEEEETTEE---------EEEEEEESEEEECT
T ss_pred -----------CCccEEeCCCCEEEEEEEeCCC---ceEEEEECCcEEEEEecCCcc---------cCCCccccEEEECC
Confidence 1134678899999999999763 689999999999999985321 23577999999999
Q ss_pred CcEEEEEEEecCceeeEEeeechhhhh------cccEEEEEEeCCC
Q 039250 516 GGWAAIRFTADNPGVWFMHCHFDIHQS------WGLGTVLIVKNGK 555 (571)
Q Consensus 516 ~g~~~irf~adnpG~w~~HCHil~H~d------~GM~~~~~V~~~~ 555 (571)
|+++.|+|+++|||.|+||||+++|++ .|||+.++|....
T Consensus 233 ger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 233 GERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp TCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred CCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999999999998 6899999986543
No 42
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=3.9e-27 Score=234.42 Aligned_cols=218 Identities=17% Similarity=0.204 Sum_probs=158.0
Q ss_pred CeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCCC----------
Q 039250 215 DVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQP---------- 284 (571)
Q Consensus 215 ~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~---------- 284 (571)
..|.|+++.|+++++++.|.. ....++|.||..+.- +.||.+ ...-.+.||+++...++++++
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 459999999999999999997 455679999987654 689975 344568999999999999752
Q ss_pred --CceeEEEeecccccC--CCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCccCceEE
Q 039250 285 --IGKYSMAMGPYMSAQ--GVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANL 360 (571)
Q Consensus 285 --~g~~~i~~~~~~~~~--~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~ 360 (571)
+|.||.|+|...... .....++.+.-++ ..... + ..|+++
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV--~~~~~-----~-----------------------------~~drE~ 150 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV--RRKGD-----V-----------------------------LPDATH 150 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEE--ECTTC-----C-----------------------------CCSEEE
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEE--ecCCC-----c-----------------------------ccccce
Confidence 589999999743110 0011122222222 21100 0 014455
Q ss_pred EEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCCCCCCCC
Q 039250 361 FVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPN 440 (571)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~ 440 (571)
.+.++ .|.|||+.|.
T Consensus 151 ~l~l~-----------------------~~~iNG~~~~------------------------------------------ 165 (276)
T 3kw8_A 151 TIVFN-----------------------DMTINNRKPH------------------------------------------ 165 (276)
T ss_dssp EEEEE-----------------------TTEETTCCTT------------------------------------------
T ss_pred EEEec-----------------------ccccceeccc------------------------------------------
Confidence 44331 2678887541
Q ss_pred CCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEE
Q 039250 441 DTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAA 520 (571)
Q Consensus 441 ~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ 520 (571)
..+.+.++.|++|+|+|.|.+. +.|||||||+.|+|++.| .++. ....+.++||+.|+|++...
T Consensus 166 ------~~p~i~v~~G~~vri~l~N~~~---~~Hp~HlHG~~f~v~~~G--~~~~-----p~~~~~~~Dtv~v~pg~~~~ 229 (276)
T 3kw8_A 166 ------TGPDFEATVGDRVEIVMITHGE---YYHTFHMHGHRWADNRTG--ILTG-----PDDPSRVIDNKITGPADSFG 229 (276)
T ss_dssp ------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSSSS--SCCS-----TTCCCCEESEEEECTTCEEE
T ss_pred ------CCCCEEEecCCEEEEEEecCCC---cceeEEEccceeEEeccC--ccCC-----CcccccCCccEEeCCCceEE
Confidence 1145688999999999999763 799999999999997643 2221 11235699999999999999
Q ss_pred EEEEec---CceeeEEeeechhhhhcccEEEEEEeCCCC
Q 039250 521 IRFTAD---NPGVWFMHCHFDIHQSWGLGTVLIVKNGKG 556 (571)
Q Consensus 521 irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~~~~~ 556 (571)
++|+++ |||.|+||||+++|++.|||+.|+|.+.+.
T Consensus 230 ~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 230 FQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 999997 899999999999999999999999987654
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=4.7e-27 Score=236.12 Aligned_cols=217 Identities=18% Similarity=0.233 Sum_probs=152.1
Q ss_pred CeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCC-----------
Q 039250 215 DVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQ----------- 283 (571)
Q Consensus 215 ~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~----------- 283 (571)
+.|.|+++.|+++++++.|... ...++|.||..+. -+.||.++. .-.+.|||++...++++.
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCC-CCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCC
Confidence 4599999999999999999975 4556899998665 367997541 124789999988887652
Q ss_pred -CCceeEEEeecccccCC--CccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCccCceEE
Q 039250 284 -PIGKYSMAMGPYMSAQG--VSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANL 360 (571)
Q Consensus 284 -~~g~~~i~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~ 360 (571)
.+|.||.+++....... .-..++ .+.|...... + ..+|+++
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL--~G~liV~~~~------~----------------------------~~~d~e~ 172 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGL--YGALVVRRQG------D----------------------------LLPKRQF 172 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTC--EEEEEEECTT------C----------------------------CCCSEEE
T ss_pred CCceeEEEecCCcccccchhhhcccc--cceEEEeccc------c----------------------------cCccccc
Confidence 45999999986432110 001122 2222222110 0 0124455
Q ss_pred EEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCCCCCCCC
Q 039250 361 FVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPN 440 (571)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~ 440 (571)
.+.++ .|.+|++.+
T Consensus 173 ~l~~~-----------------------~~~~Ng~~~------------------------------------------- 186 (299)
T 3t9w_A 173 TVVFN-----------------------DMMINNRAH------------------------------------------- 186 (299)
T ss_dssp EEEEE-----------------------TTEETTCCT-------------------------------------------
T ss_pred eeeee-----------------------eeeecCccc-------------------------------------------
Confidence 44432 256666532
Q ss_pred CCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEE
Q 039250 441 DTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAA 520 (571)
Q Consensus 441 ~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ 520 (571)
.....+.++.|++|+|++.|.+. +.||||||||.|+|+..+.... ....+.++||+.|.|++...
T Consensus 187 -----~~~p~l~v~~Ge~Vr~~liN~~~---~~HpfHlHGh~F~v~~~g~~~~-------~~~~~~~~Dtv~v~PGe~~~ 251 (299)
T 3t9w_A 187 -----HDAPTFEANLGERVEWIAIGHGS---NFHTFHLHGHRWLDNRTGMRTS-------EYDPSPLIDIKDLNPGVSFG 251 (299)
T ss_dssp -----TCCCEEEEETTCEEEEEEEEESS---CCCEEEETTCCEESSSSSSCCS-------TTCCCCEESEEECCTTCEEE
T ss_pred -----cccccceecCCCEEEEEEEeccc---cceeeeEecceEEEEecccccC-------CcCCCCceeeEEeCCceeEE
Confidence 11245788999999999999763 7899999999999988764321 23445689999999997665
Q ss_pred EE---EEecCceeeEEeeechhhhhcccEEEEEEeCCC
Q 039250 521 IR---FTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGK 555 (571)
Q Consensus 521 ir---f~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 555 (571)
++ |+++|||.|+|||||++|++.|||++|+|.+.+
T Consensus 252 ~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 252 FQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp EEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred EEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 54 457799999999999999999999999998654
No 44
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=3.4e-26 Score=231.64 Aligned_cols=217 Identities=16% Similarity=0.144 Sum_probs=153.0
Q ss_pred CeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCC-----------
Q 039250 215 DVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQ----------- 283 (571)
Q Consensus 215 ~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~----------- 283 (571)
+.|.|+++.|++++++|.|... ...++|.||..+.- +.||.+. ..-.|.||+++...+++..
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccC
Confidence 4499999999999999999975 45568999976643 5789754 1224789999988877642
Q ss_pred -CCceeEEEeecccccCC--CccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCccCceEE
Q 039250 284 -PIGKYSMAMGPYMSAQG--VSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANL 360 (571)
Q Consensus 284 -~~g~~~i~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~ 360 (571)
..|.||.|+|....... .-..++.+.-|+ .... . ..+|+++
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV--~~~~------~----------------------------~~~d~e~ 156 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV--RRKG------D----------------------------VLPDRTH 156 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEE--ECTT------C----------------------------BCCSEEE
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEe--eccc------c----------------------------ccccccc
Confidence 35899999986432110 001122222222 2110 0 0124455
Q ss_pred EEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCCCCCCCC
Q 039250 361 FVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPN 440 (571)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~ 440 (571)
.+.++ .|++|+..+.
T Consensus 157 ~l~~~-----------------------d~t~Ng~~~~------------------------------------------ 171 (313)
T 3tas_A 157 TIVFN-----------------------DMTINNRPAH------------------------------------------ 171 (313)
T ss_dssp EEEEE-----------------------TTEETTCCTT------------------------------------------
T ss_pred eeecc-----------------------chhcccCCcc------------------------------------------
Confidence 44432 2677765321
Q ss_pred CCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEE
Q 039250 441 DTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAA 520 (571)
Q Consensus 441 ~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ 520 (571)
....+.++.|++|+|++.|.+. +.||||||||.|+|+..+... .....+.++||+.|.|++...
T Consensus 172 ------~~~~l~v~~Ge~vr~~liN~g~---~~hpfHlHGh~F~v~~~~~~~-------~~~~~~~~~Dtv~l~Pger~~ 235 (313)
T 3tas_A 172 ------TGPDFEATVGDRVEFVMITHGE---YYHTFHLHGHRWADNRTGMLT-------GPDDPSQVIDNKICGPADSFG 235 (313)
T ss_dssp ------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSTTSSCC-------STTCCCCEESEEEECTTCEEE
T ss_pred ------cccccccccCCEEEEEEecccc---cceeeeecCCeeEEEEECCcc-------CCCCCCeeeeEEEeCCCcceE
Confidence 1134678899999999999763 789999999999998875321 122457899999999999988
Q ss_pred EEEEe---cCceeeEEeeechhhhhcccEEEEEEeCCC
Q 039250 521 IRFTA---DNPGVWFMHCHFDIHQSWGLGTVLIVKNGK 555 (571)
Q Consensus 521 irf~a---dnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 555 (571)
+++.+ +|||.|+|||||++|++.|||+.|+|.+.+
T Consensus 236 v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 236 FQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp EEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred EEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 88764 599999999999999999999999998765
No 45
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.89 E-value=6.1e-25 Score=221.86 Aligned_cols=237 Identities=11% Similarity=0.043 Sum_probs=137.4
Q ss_pred EEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCC----eeEeceEEeCCCce
Q 039250 199 YTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK----PFSTDRVMLGPGQT 274 (571)
Q Consensus 199 ~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----P~~~d~l~l~pgeR 274 (571)
.++||.+| |.|+++.|+++++|+.|.. ....++|.||..+.. +.||.+.. +...+...|.||||
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 45787766 8999999999999999987 456678888887533 68997652 23334578999999
Q ss_pred EEEEEEeCCCC---------ceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCc
Q 039250 275 VNVLVTADQPI---------GKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLR 345 (571)
Q Consensus 275 ~dv~v~~~~~~---------g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~ 345 (571)
++..+++++.+ |+||.|+|.....+ ...++.+ ++|.+...... ..+ ..+..
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q--~~~GL~G-~liV~~~~~~~--~~~-~~~~~-------------- 179 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED--FNSGLIG-PLLICKKGTLT--EDG-TQKMF-------------- 179 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH--HHTTCCE-EEEEECTTCBC--TTS-SBSSS--------------
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh--hccCceE-EEEEccCCCCC--ccC-CcCcc--------------
Confidence 99999997643 69999999532111 0122333 34433321110 001 00000
Q ss_pred cCCCCCCCccCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCc
Q 039250 346 SLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPL 425 (571)
Q Consensus 346 ~l~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p 425 (571)
|+++.+.++. .+. ...... .....+.|||+.+..
T Consensus 180 -----------d~e~~l~~~d--~d~-----~~~~~~--~~~~~~~ING~~~~~-------------------------- 213 (306)
T 1sdd_A 180 -----------EKQHVLMFAV--FDE-----SKSWNQ--TSSLMYTVNGYVNGT-------------------------- 213 (306)
T ss_dssp -----------CCCCCCBCCE--EET-----TSSSSC--CCCEEECSSSCCSSC--------------------------
T ss_pred -----------cceEEEEEEe--ccc-----cccccc--CCCcceeeCCEecCC--------------------------
Confidence 0010000000 000 000000 011246677654310
Q ss_pred cccccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCC
Q 039250 426 KFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDP 505 (571)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p 505 (571)
.+.+.++.|++++|+|.|.+. ....||||+|||.|++ .|
T Consensus 214 ----------------------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----dG-------------- 252 (306)
T 1sdd_A 214 ----------------------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----NH-------------- 252 (306)
T ss_dssp ----------------------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----TT--------------
T ss_pred ----------------------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----CC--------------
Confidence 122356789999999999763 2257999999999976 11
Q ss_pred CcceeEEeCCCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeCC
Q 039250 506 PYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNG 554 (571)
Q Consensus 506 ~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 554 (571)
..+||+.|.||+.+.|+|++++||.|+||||+++|++.|||+.|+|.+.
T Consensus 253 ~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 253 HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 3699999999999999999999999999999999999999999999753
No 46
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=5.4e-22 Score=220.60 Aligned_cols=241 Identities=11% Similarity=0.137 Sum_probs=145.0
Q ss_pred CeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCC---e-eEeceEEeCCCceEEEEEEeCCC-----C
Q 039250 215 DVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK---P-FSTDRVMLGPGQTVNVLVTADQP-----I 285 (571)
Q Consensus 215 ~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~---P-~~~d~l~l~pgeR~dv~v~~~~~-----~ 285 (571)
+.|.|+++.|+++++||.|... ...++|.||.... .+.||.+.. | ..+....|.||++++..+++++. +
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 3499999999999999999985 4556888887765 478997642 1 22346679999999999999874 4
Q ss_pred c----eeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCccCceEEE
Q 039250 286 G----KYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANLF 361 (571)
Q Consensus 286 g----~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~~~d~~~~ 361 (571)
| .||.|+|.....+ ...++.+ ++|......... .+ ..|. .++++.
T Consensus 145 G~~c~T~wYHsH~~~~~q--~~~GL~G-~lIV~~~~~~~~--~~-~~~~-------------------------~~~e~~ 193 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD--IHSGLIG-PLLICRKGTLDK--ET-NMPV-------------------------DMREFV 193 (647)
T ss_dssp SCSEEEEEEECCSSHHHH--HTTTCEE-EEEEECTTSSCT--TS-CCCS-------------------------SCCEEE
T ss_pred CCCceEEEEccCCCCccc--ccccCcc-CEEEeeCCCccc--cc-CCCC-------------------------cceeEE
Confidence 7 9999999742111 1122333 333332211100 00 0010 012222
Q ss_pred EEEeccccccC--CCCCCC----ccc-CCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCC
Q 039250 362 VTIGLNVQKCR--SGNPQQ----NCR-GLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGA 434 (571)
Q Consensus 362 ~~~~~~~~~~~--~~~~~~----~~~-~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 434 (571)
+.+..-..... .+...+ ... ........+.+||+.+
T Consensus 194 l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~------------------------------------- 236 (647)
T 1sdd_B 194 LLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY------------------------------------- 236 (647)
T ss_dssp EEEEEEEGGGSSCCC---------------CCCEEEEETTBSS-------------------------------------
T ss_pred EEEEeecCccccccccCcccccccCCcchhhcCceeccCCEec-------------------------------------
Confidence 22211000000 000000 000 0000011233444321
Q ss_pred CCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeC
Q 039250 435 PNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVP 514 (571)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vp 514 (571)
..+.+.++.|++++|+|.|.+. ..+.||||+|||.|+|++. ++.++||+.|.
T Consensus 237 ------------~~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~---------------d~~~~d~v~l~ 288 (647)
T 1sdd_B 237 ------------NLPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT---------------QQHQLGVWPLL 288 (647)
T ss_dssp ------------CCCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS---------------SCEEESSEEEC
T ss_pred ------------CCCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC---------------CCcccceEEEC
Confidence 1134678899999999999752 2358999999999999865 24589999999
Q ss_pred CCcEEEEEEEecCceeeEEeeechhhhhcccEEEEEEeC
Q 039250 515 VGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKN 553 (571)
Q Consensus 515 p~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 553 (571)
||+++.|+|++++||.|+||||+++|++.|||+.|.|.+
T Consensus 289 pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 289 PGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp TTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred CCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 999999999999999999999999999999999999974
No 47
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.87 E-value=4.1e-21 Score=197.12 Aligned_cols=93 Identities=23% Similarity=0.279 Sum_probs=78.4
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCC--cceeEEeCCCcEEEEEEEec
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPP--YMNTIGVPVGGWAAIRFTAD 526 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~--~rDTv~vpp~g~~~irf~ad 526 (571)
..+.++.|++++|++.|.+ ...|++|+|||.|+|++. |.+ .+++ ++||+.|++|+.+.|.|+++
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~---------~~~p~~~~dtv~l~pGer~~v~v~~~ 296 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF---------RNPPDLDQETWLIPGGTAGAAFYTFR 296 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT---------TSCCEEEESCCCBCTTEEEEEEEECC
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc---------cCCccccceEEEeCCCceEEEEEECC
Confidence 5678999999998887754 367899999999999863 322 2233 57999999999999999999
Q ss_pred CceeeEEeeech-hhhhcccEEEEEEeCCC
Q 039250 527 NPGVWFMHCHFD-IHQSWGLGTVLIVKNGK 555 (571)
Q Consensus 527 npG~w~~HCHil-~H~d~GM~~~~~V~~~~ 555 (571)
+||.|+||||++ +|++.|||+.|+|....
T Consensus 297 ~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 297 QPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp SCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 999999999999 59999999999998654
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=2.6e-21 Score=197.09 Aligned_cols=244 Identities=17% Similarity=0.177 Sum_probs=159.2
Q ss_pred CCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCcc-ceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCce
Q 039250 196 SNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLN-MENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQT 274 (571)
Q Consensus 196 ~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR 274 (571)
...+++||+. ..|.|++++|++++||++|.... ..+++|+||.. +.||... ...|.|||+
T Consensus 58 ~~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~ 118 (327)
T 1kbv_A 58 YRYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRT 118 (327)
T ss_dssp EEEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEE
T ss_pred EEEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCE
Confidence 3478999983 34999999999999999999753 45678998863 5788642 224899999
Q ss_pred EEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCc
Q 039250 275 VNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPK 354 (571)
Q Consensus 275 ~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~ 354 (571)
+++.+++++ +|.||+|||....... ...++ .+.+.+.... .+| .
T Consensus 119 ~~y~f~~~~-~Gt~wyH~h~~~~~~~-~~~Gl--~G~~iV~~~~----~~p----~------------------------ 162 (327)
T 1kbv_A 119 STFSFKALQ-PGLYIYHCAVAPVGMH-IANGM--YGLILVEPKE----GLP----K------------------------ 162 (327)
T ss_dssp EEEEEECCS-CEEEEEECCCSSHHHH-HHTTC--EEEEEEECTT----CCC----C------------------------
T ss_pred EEEEEECCC-CeEEEEEeCCCChhhh-hhcce--EEEEEEecCC----CCC----C------------------------
Confidence 999999986 6999999986431110 01122 2333332211 111 1
Q ss_pred cCceEEEEEEeccccccCCCCC------CCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCcccc
Q 039250 355 EIDANLFVTIGLNVQKCRSGNP------QQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFY 428 (571)
Q Consensus 355 ~~d~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~ 428 (571)
.|+.+.+.++.-......+.. .....+ .....+.+||+.+.
T Consensus 163 -~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~iNG~~~~------------------------------ 209 (327)
T 1kbv_A 163 -VDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAVA--EQPEYVVFNGHVGA------------------------------ 209 (327)
T ss_dssp -CSEEEEEEEEEECBSSCTTCCEEECBCHHHHHH--TCCSEEEETTSTTT------------------------------
T ss_pred -CceEEEEEeeeeeccCccccccccccChhHhcc--CCCceEEEcCcccC------------------------------
Confidence 111211111100000000000 000000 00012334443210
Q ss_pred ccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcc
Q 039250 429 DFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYM 508 (571)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~r 508 (571)
..+...+.++.|++++|+|.|.+. ...|+||+|||.|+||+.+.+. ..|.++
T Consensus 210 ----------------~~~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~----------~~p~~~ 261 (327)
T 1kbv_A 210 ----------------LTGDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK----------LINENV 261 (327)
T ss_dssp ----------------TSGGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS----------CEECSB
T ss_pred ----------------CCCceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc----------CCCCce
Confidence 001246788999999999999753 3689999999999999986542 236789
Q ss_pred eeEEeCCCcEEEEEEEecCceeeEEeeechhhh-hcccEEEEEEeCCC
Q 039250 509 NTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQ-SWGLGTVLIVKNGK 555 (571)
Q Consensus 509 DTv~vpp~g~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~ 555 (571)
|++.|.||+.+.|.|++++||.|.+|||+.+|. ..||++.+.|....
T Consensus 262 d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 262 QSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp SEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred eEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 999999999999999999999999999999995 89999999998654
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.83 E-value=2.6e-19 Score=183.05 Aligned_cols=94 Identities=18% Similarity=0.185 Sum_probs=75.3
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCC-cceeEEeCCCcEEEEEEEecC
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPP-YMNTIGVPVGGWAAIRFTADN 527 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~adn 527 (571)
..+.++.|++++|++.|.+. ..|+.++|+|.|+|++. |.+- ..|. ++||+.|.||+.+.|.|.+++
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~~---~~~~h~i~~h~~~Vi~d--G~~~--------~~p~~~~dtv~l~pGer~~v~v~a~~ 291 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPNR---DSRPHLIGGHGDLVWET--GKFH--------NAPERDLETWFIRGGTAGAALYKFLQ 291 (333)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEETT--CCTT--------SCCEEEESBCCBCTTEEEEEEEECCS
T ss_pred cceEecCCCEEEEEECCCCC---ccccEEECCCCeEEEeC--Cccc--------CCCccCcceEEECCCceEEEEEEcCC
Confidence 45788999999988777542 34445577888998872 3321 1122 689999999999999999999
Q ss_pred ceeeEEeeechhhh-hcccEEEEEEeCCC
Q 039250 528 PGVWFMHCHFDIHQ-SWGLGTVLIVKNGK 555 (571)
Q Consensus 528 pG~w~~HCHil~H~-d~GM~~~~~V~~~~ 555 (571)
||.|+||||++.|+ +.|||+.|+|....
T Consensus 292 pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 292 PGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp CEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred CEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 99999999999997 99999999998654
No 50
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.83 E-value=5.3e-22 Score=222.11 Aligned_cols=88 Identities=20% Similarity=0.344 Sum_probs=78.1
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++++|+|.|.+. ..+.||||||||.|+|++.+ +.++||+.|+||+++.|+|++|+|
T Consensus 368 ~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d---------------g~~~Dtv~l~Pg~~~~v~~~ad~p 431 (770)
T 2r7e_B 368 PGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE---------------EYKMALYNLYPGVFETVEMLPSKA 431 (770)
T ss_dssp CCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS---------------CCEESEEECCTTCCCEEEECCSSC
T ss_pred CCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC---------------CceeeEEEECCCeEEEEEEEeCCC
Confidence 34567889999999999753 23589999999999998763 238999999999999999999999
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|+||||+++|++.|||+.|.|.
T Consensus 432 G~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 432 GIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp BCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CceEEEeccccccccccccccccc
Confidence 999999999999999999999884
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.80 E-value=3.3e-18 Score=175.22 Aligned_cols=278 Identities=18% Similarity=0.154 Sum_probs=156.8
Q ss_pred CCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCcc-ceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCce
Q 039250 196 SNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLN-MENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQT 274 (571)
Q Consensus 196 ~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR 274 (571)
...+++||+. ..|.|+++.|+++++|+.|.... ..+.++++|+.. .||.. +. . .|.||++
T Consensus 53 ~~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~ 113 (336)
T 1oe1_A 53 LQAMTFNGSM---------PGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQ 113 (336)
T ss_dssp EEEEEETTBS---------SCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEE
T ss_pred EEEEEECCcc---------CCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCE
Confidence 3578999983 34999999999999999998743 345688888753 23331 21 1 3899999
Q ss_pred EEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCc
Q 039250 275 VNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPK 354 (571)
Q Consensus 275 ~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~ 354 (571)
++..+++++ +|.||.|||...........++.+.-+++ .... .+ .. ...+.
T Consensus 114 ~~y~f~~~~-~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~--~~~~----~~----~~------------------~~~~~ 164 (336)
T 1oe1_A 114 ATLRFKADR-SGTFVYHCAPEGMVPWHVVSGMSGTLMVL--PRDG----LK----DP------------------QGKPL 164 (336)
T ss_dssp EEEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEE--CTTC----CB----CT------------------TSCBC
T ss_pred EEEEEECCC-CeEEEEecCCCCchhHHHhCCCeEEEEEe--cCcC----Cc----cc------------------ccCcc
Confidence 999999986 79999999974310000011223333333 2111 00 00 00111
Q ss_pred cCceEEEEEEeccccccCCCCCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCccccccCCCC
Q 039250 355 EIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGA 434 (571)
Q Consensus 355 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 434 (571)
..|+.+.+.++.-..... ..+ .+ ..|..+.......... ..+ ..+..+-.+|..
T Consensus 165 ~~D~e~~l~~~D~~~~~~----------~~g-~~------~~~~~~~~~~~~~~~~-~~~--------~~~~~~liNG~~ 218 (336)
T 1oe1_A 165 HYDRAYTIGEFDLYIPKG----------PDG-KY------KDYATLAESYGDTVQV-MRT--------LTPSHIVFNGKV 218 (336)
T ss_dssp CCSEEEEEEEEEECCCBC----------TTS-SB------CCCSSTGGGHHHHHHH-HHT--------TCCSEEEETTST
T ss_pred cCCceeEeeeeeeeeccc----------cCC-ce------eecccccccccchhhH-hhc--------CCCCEEEECCee
Confidence 234444443321100000 000 00 0011110000000000 000 001111111210
Q ss_pred CCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCC--cceeEE
Q 039250 435 PNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPP--YMNTIG 512 (571)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~--~rDTv~ 512 (571)
....+...+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+ .+|+ +.||+.
T Consensus 219 --------~~~~~~~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~---------~~p~~~~~dtv~ 276 (336)
T 1oe1_A 219 --------GALTGANALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF---------ANPPQRDLETWF 276 (336)
T ss_dssp --------TTTSGGGCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT---------TSCCEEEESBCC
T ss_pred --------ccCCCCcceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC---------cCCccccceEEE
Confidence 0011236688999999998666543 24566667999999985 3322 2233 579999
Q ss_pred eCCCcEEEEEEEecCceeeEEeeechhhh-hcccEEEEEEeCCCCCC-CcCCCCCCCCC
Q 039250 513 VPVGGWAAIRFTADNPGVWFMHCHFDIHQ-SWGLGTVLIVKNGKGEL-ETLPHPPADFP 569 (571)
Q Consensus 513 vpp~g~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~~~-~~~~~~p~~~~ 569 (571)
|++|+.+.|.|++++||.|+||||.+.|. +.||++.|.|.....+. -.....|..+|
T Consensus 277 i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~ 335 (336)
T 1oe1_A 277 IRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIP 335 (336)
T ss_dssp BCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCC
T ss_pred ECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCC
Confidence 99999999999999999999999999985 99999999998654321 12224455555
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.79 E-value=2.2e-18 Score=183.26 Aligned_cols=245 Identities=15% Similarity=0.130 Sum_probs=159.8
Q ss_pred CCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCcc-ceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCce
Q 039250 196 SNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLN-MENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQT 274 (571)
Q Consensus 196 ~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR 274 (571)
...+++||+. ..|.|+++.|++++||+.|.... ..+.+|+||+. ..||... +..|.||++
T Consensus 48 ~~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~ 108 (442)
T 2zoo_A 48 YVFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHT 108 (442)
T ss_dssp EEEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCE
T ss_pred EEEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCE
Confidence 3578999984 34999999999999999999642 46679999975 3687532 235899999
Q ss_pred EEEEEEeCCCCceeEEEeecccccCCCccCCcceEEEEEEcCCCCCCCCCCCCCCCCCCccchhhhcccCccCCCCCCCc
Q 039250 275 VNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPK 354 (571)
Q Consensus 275 ~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~p~~~~~~~~~~~~~~l~~l~p~~~p~ 354 (571)
+++.+++++ +|.||+|||....... ... ...+.+.+.... .+|.
T Consensus 109 ~~y~f~~~~-~Gt~~yH~H~~~~~~~-~~~--Gl~G~~iv~~~~--------~~~~------------------------ 152 (442)
T 2zoo_A 109 STFNFKALN-PGLYIYHCATAPVGMH-IAN--GMYGLILVEPKE--------GLAP------------------------ 152 (442)
T ss_dssp EEEEEECCS-CEEEEEECCCSSHHHH-HHT--TCEEEEEEECTT--------CCCC------------------------
T ss_pred EEEEEEcCC-CeEEEEecCCCChHHH-HhC--ccEEEEEEeCCC--------CCCC------------------------
Confidence 999999975 7999999975321110 011 123444443221 0111
Q ss_pred cCceEEEEEEeccccccCCC------CCCCcccCCCCceeEEeecceeecCCChhHHhhhhhccCcccccCCCCCCcccc
Q 039250 355 EIDANLFVTIGLNVQKCRSG------NPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFY 428 (571)
Q Consensus 355 ~~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~in~~~~~~p~~~ll~~~~~~~~g~~~~~~~~~~p~~~ 428 (571)
.|+.+.+.++.-......+ +...... ......+.|||+.+.
T Consensus 153 -~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~liNG~~~~------------------------------ 199 (442)
T 2zoo_A 153 -VDREYYLVQGDFYTKGEFGEAGLQPFDMAKAI--DEDADYVVFNGSVGS------------------------------ 199 (442)
T ss_dssp -CSEEEEEEEEEECBSSCTTCCEEECBCHHHHH--TTCCSEEEETTSTTT------------------------------
T ss_pred -CCceEEEEeeeeeccCcccccccccCChhHhc--cCCCCEEEECCCcCC------------------------------
Confidence 1122222221100000000 0000000 000012334433210
Q ss_pred ccCCCCCCCCCCCCCCCCCceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcc
Q 039250 429 DFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYM 508 (571)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~r 508 (571)
......+.++.|++++|+|.|.+. ...|+||+||+.|+|++.+.+. ..|.+.
T Consensus 200 ----------------~~~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~~----------~~p~~~ 251 (442)
T 2zoo_A 200 ----------------TTDENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGGS----------LKNHNV 251 (442)
T ss_dssp ----------------TSGGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS----------CEECSB
T ss_pred ----------------CCCCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCcc----------CCCccc
Confidence 001145788999999999999752 3689999999999999986432 236789
Q ss_pred eeEEeCCCcEEEEEEEecCceeeEEeeechhh-hhcccEEEEEEeCCCC
Q 039250 509 NTIGVPVGGWAAIRFTADNPGVWFMHCHFDIH-QSWGLGTVLIVKNGKG 556 (571)
Q Consensus 509 DTv~vpp~g~~~irf~adnpG~w~~HCHil~H-~d~GM~~~~~V~~~~~ 556 (571)
|++.|.||+...|.|++++||.|.+|||.+.| .+.||++.|.|.....
T Consensus 252 ~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 252 QTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp SEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred eEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 99999999999999999999999999999999 6999999999986653
No 53
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.77 E-value=5.3e-17 Score=172.33 Aligned_cols=238 Identities=15% Similarity=0.103 Sum_probs=161.0
Q ss_pred eEEEEEEEEEEEeecC-----------CceeeEEEECCcCCCceEEEecCCEEEEEEEeCC-CCCeeEEe-cccccCCCC
Q 039250 33 TRFYEFKIQATRVNKL-----------CNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQS-PYNATIHW-HGVRQRLSC 99 (571)
Q Consensus 33 ~~~~~l~i~~~~~~~~-----------g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~-HG~~~~~~~ 99 (571)
.+++.|.+++.....+ |.....+++||+. .|+|+|++| ++++||.|.. .....+|+ ||.......
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 4567777776654433 3346789999996 599999999 9999999994 56788999 887654443
Q ss_pred CCCCCCc-----cccCcCCCCCeEEEEEEeCCCCcceeEeecccccccce-e-----------eEEE-EecCCCC---CC
Q 039250 100 WFDGPAY-----ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGTV-Y-----------GAIV-VYPKTGV---PY 158 (571)
Q Consensus 100 ~~DG~~~-----~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl-~-----------G~li-V~~~~~~---~~ 158 (571)
.||.+. +++..|.||||++..+++ .+.|+||++++......|+ . .+++ ....... ..
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~ 307 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD 307 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccc
Confidence 599652 456889999999999999 5789999998875322221 0 1111 1111100 00
Q ss_pred CCCC-----------CCccEEEEEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEE
Q 039250 159 PFQF-----------PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTY 227 (571)
Q Consensus 159 ~~~~-----------~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~ 227 (571)
.++. .+.+..+.++ ..++|||+.+. ...+.+.++.|+++
T Consensus 308 ~~p~~L~~~~~~~~~~~~~~~~~l~------------------------~~~~iNg~~f~------~~~~~~~~~~G~~~ 357 (451)
T 2uxt_A 308 SLPMRLLPTEIMAGSPIRSRDISLG------------------------DDPGINGQLWD------VNRIDVTAQQGTWE 357 (451)
T ss_dssp CCCSCSSSSCCCCCCCSEEEEEEEC------------------------SSSSBTTBCCC------TTCCCEEEETTCEE
T ss_pred cCccccCCCCCCCCCCcceEEEEEe------------------------eEEEECCEeCC------CCCCcEEcCCCCEE
Confidence 0000 0001111110 04679999642 12457899999999
Q ss_pred EEEEeecCccceEEEEEcCceeEEEEeCCCCC---CeeEeceEEeCCCceEEEEEEeCCCCce----eEEEeecccccCC
Q 039250 228 LLRLINAGLNMENFFAIANHKLTIVEADAEYT---KPFSTDRVMLGPGQTVNVLVTADQPIGK----YSMAMGPYMSAQG 300 (571)
Q Consensus 228 rlRliNa~~~~~~~~~i~gh~~~via~DG~~~---~P~~~d~l~l~pgeR~dv~v~~~~~~g~----~~i~~~~~~~~~~ 300 (571)
+|+|+|. ..+.||||||.|+|++.||.+. +|.++|++.+ |+++.|.+++++ +|. |.+|||.......
T Consensus 358 ~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g~w~~HCHil~H~d~ 431 (451)
T 2uxt_A 358 RWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHFPFYFNSQTLEMADR 431 (451)
T ss_dssp EEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTBCEEEEESSHHHHHT
T ss_pred EEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCCceEEeCCchhHHhC
Confidence 9999998 3677999999999999999876 4789999999 999999999985 455 9999998644321
Q ss_pred CccCCcceEEEEEEcC
Q 039250 301 VSFQNISAIAYFQYLG 316 (571)
Q Consensus 301 ~~~~~~~~~ail~y~~ 316 (571)
...+.+.+..
T Consensus 432 ------GMm~~~~v~~ 441 (451)
T 2uxt_A 432 ------GSIGQLLVNP 441 (451)
T ss_dssp ------TCEEEEEEEC
T ss_pred ------CCcEEEEEcc
Confidence 2456666653
No 54
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.75 E-value=1.6e-16 Score=168.44 Aligned_cols=234 Identities=15% Similarity=0.140 Sum_probs=164.9
Q ss_pred ceEEEEEEEEEEEeec------------CCceeeEEEECCcCCCceEEEecCCEEEEEEEeC-CCCCeeEEecccccCCC
Q 039250 32 STRFYEFKIQATRVNK------------LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHGVRQRLS 98 (571)
Q Consensus 32 ~~~~~~l~i~~~~~~~------------~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG~~~~~~ 98 (571)
..+++.|.+++..... .|.....+++||+. .|+|+|++| ++++||.|. ......+|++|......
T Consensus 145 ~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi 222 (439)
T 2xu9_A 145 EAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLI 222 (439)
T ss_dssp TSEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEE
T ss_pred CCCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEE
Confidence 3567777776654332 14456789999997 599999999 999999999 45578899999876654
Q ss_pred CCCCCCCc-----cccCcCCCCCeEEEEEEeCCCCcceeEeeccccc--c--cce--------------e--eEEEEecC
Q 039250 99 CWFDGPAY-----ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWL--R--GTV--------------Y--GAIVVYPK 153 (571)
Q Consensus 99 ~~~DG~~~-----~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~--~--~Gl--------------~--G~liV~~~ 153 (571)
. .||.+. +....|.|||+++..+++ +++|.||++++.... . .|| . ..+.+...
T Consensus 223 ~-~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 300 (439)
T 2xu9_A 223 A-ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKN 300 (439)
T ss_dssp E-ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSS
T ss_pred e-cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCC
Confidence 4 599762 345679999999999999 569999999975321 1 021 1 12222222
Q ss_pred CCCCCCCCC----------CCccEEEEEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeC
Q 039250 154 TGVPYPFQF----------PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVP 223 (571)
Q Consensus 154 ~~~~~~~~~----------~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~ 223 (571)
. ...+++. ...+..+.+.- .. .+..++|||+.+. . ..+.+.++.
T Consensus 301 ~-~~~~~p~~l~~~~~l~~~~~~r~~~l~~---~~----------------~g~~~~iNg~~~~---~---~~~~~~~~~ 354 (439)
T 2xu9_A 301 P-KPLPLPKALSPFPTLPAPVVTRRLVLTE---DM----------------MAARFFINGQVFD---H---RRVDLKGQA 354 (439)
T ss_dssp C-CCCCCCSCCCCCCCCCCCSEEEEEEEEE---EG----------------GGTEEEETTBCCC---T---TCCCEEECT
T ss_pred C-ccccCcccCCCcccCCCCCcceEEEEEe---ec----------------cCceEeECCEECC---C---CCCceecCC
Confidence 1 1111110 00011111110 00 0136889999642 1 234589999
Q ss_pred CCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCC-CeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccc
Q 039250 224 GKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYT-KPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 224 G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~ 297 (571)
|++++|+|.|.+.. .+.||||||.|+|++.+|... .|.++|++.|.||+++.+.++++ +||.|.+|||....
T Consensus 355 g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil~H 427 (439)
T 2xu9_A 355 QTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIVEH 427 (439)
T ss_dssp TCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSHHH
T ss_pred CCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcchh
Confidence 99999999999854 456999999999999999766 68899999999999999999976 57999999998643
No 55
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.68 E-value=6e-15 Score=158.80 Aligned_cols=242 Identities=16% Similarity=0.146 Sum_probs=163.4
Q ss_pred EEEEEEEEEEeecCCc-----eeeEEEECCcCC--------CceEEEecCCEEEEEEEeCC-CCCeeEEecccccCCCCC
Q 039250 35 FYEFKIQATRVNKLCN-----AKDIVTVNNMFP--------GPVVYAQEDDRIIVKVTNQS-PYNATIHWHGVRQRLSCW 100 (571)
Q Consensus 35 ~~~l~i~~~~~~~~g~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~ 100 (571)
++.|.+++.....++. ....+++||+.. .|+|+|++|+++++||.|.. .....+|++|.......
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 5666666654444332 356789999853 28999999999999999994 45788999887765443
Q ss_pred CCCCC----ccccCcCCCCCeEEEEEEeCCCCcceeEeecccc--------cccceeeEEEEecCCCCCCCC----CC--
Q 039250 101 FDGPA----YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW--------LRGTVYGAIVVYPKTGVPYPF----QF-- 162 (571)
Q Consensus 101 ~DG~~----~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~--------~~~Gl~G~liV~~~~~~~~~~----~~-- 162 (571)
.||.+ .+....|.||||++..++++..+|.||.+++... ...++..+++.........+. +.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~ 301 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPA 301 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCC
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccC
Confidence 59965 2345678999999999999656899999998641 111343344443321111000 00
Q ss_pred C---------------------CccEEEEEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCC-------C--
Q 039250 163 P---------------------YQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNC-------S-- 212 (571)
Q Consensus 163 ~---------------------~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~-------~-- 212 (571)
. ..++.+.+.- + .....++|||+.+..-.. +
T Consensus 302 ~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~----------------~---~~~~~~~iNg~~~~~~~~P~l~~~~~g~ 362 (503)
T 1hfu_A 302 QLNEADLHALIDPAAPGIPTPGAADVNLRFQL----------------G---FSGGRFTINGTAYESPSVPTLLQIMSGA 362 (503)
T ss_dssp BCCGGGCBBSSSCSCSSCSSTTCSSEEEECCE----------------E---EETTEEEETTBCCCCCSSCHHHHHHTTC
T ss_pred CCccccccccCccCCCCcccCCcceEEEEEEe----------------e---ccCceEEECCCccCCCCCcchhhhhcCC
Confidence 0 0011111000 0 001268899996521100 0
Q ss_pred ------CCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCC----CeeEeceEEe-CCCceEEEEEEe
Q 039250 213 ------ANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYT----KPFSTDRVML-GPGQTVNVLVTA 281 (571)
Q Consensus 213 ------~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~----~P~~~d~l~l-~pgeR~dv~v~~ 281 (571)
......+.++.|++++++++|......+.||||||.|+|++.+|... .|.++|++.| .||+++.|.+++
T Consensus 363 ~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~a 442 (503)
T 1hfu_A 363 QSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT 442 (503)
T ss_dssp CSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEEC
T ss_pred cccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEc
Confidence 01235789999999999999544345667999999999999999753 6899999999 899999999999
Q ss_pred CCCCceeEEEeecccc
Q 039250 282 DQPIGKYSMAMGPYMS 297 (571)
Q Consensus 282 ~~~~g~~~i~~~~~~~ 297 (571)
+ +||.|.+|||....
T Consensus 443 d-nPG~W~~HCHil~H 457 (503)
T 1hfu_A 443 D-NPGPWFFHCHIEFH 457 (503)
T ss_dssp C-SCEEEEEEESSHHH
T ss_pred C-CCeeeeEecCchhH
Confidence 7 47999999998544
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.67 E-value=4.5e-15 Score=160.31 Aligned_cols=225 Identities=20% Similarity=0.211 Sum_probs=154.5
Q ss_pred eeEEEECCcCC---------CceEEEecCCEEEEEEEeCC-CCCeeEEecccccCCCCCCCCCCc----cccCcCCCCCe
Q 039250 52 KDIVTVNNMFP---------GPVVYAQEDDRIIVKVTNQS-PYNATIHWHGVRQRLSCWFDGPAY----ITQCPIQSGQT 117 (571)
Q Consensus 52 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~ 117 (571)
...+++||+.. -|+|+|++|+++++||.|.. .....+|++|....... .||.+- +....|.||||
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 56789999853 18999999999999999994 45778999888765544 599652 34567999999
Q ss_pred EEEEEEeCCCCcceeEeeccccc----ccceeeEEEEecCCCCCCCCCCC--------------------------CccE
Q 039250 118 FTYEFTMFQQKGTFFWHAHVSWL----RGTVYGAIVVYPKTGVPYPFQFP--------------------------YQEH 167 (571)
Q Consensus 118 ~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~--------------------------~~e~ 167 (571)
++..++++..+|.||.+++.... ..|+..+++.........+.... ..++
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~ 349 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADI 349 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSE
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceE
Confidence 99999996557999999986421 12443444444322111010000 0111
Q ss_pred EEEEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCC---------------CCCeeEEEEeCCCEEEEEEe
Q 039250 168 IIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCS---------------ANDVYKIEVVPGKTYLLRLI 232 (571)
Q Consensus 168 ~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~---------------~~~~p~l~v~~G~~~rlRli 232 (571)
.+.+.- +. ......++|||+.+..-... ....+.+.++.|++++++++
T Consensus 350 ~~~l~~----------------~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~ 412 (521)
T 1v10_A 350 NLNLRI----------------GR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIP 412 (521)
T ss_dssp EEECCE----------------EC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEE
T ss_pred EEEEEE----------------ec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEc
Confidence 111100 00 00112578999865211100 01236789999999999999
Q ss_pred ecCccceEEEEEcCceeEEEEeCCCC----CCeeEeceEEe-CCCceEEEEEEeCCCCceeEEEeeccccc
Q 039250 233 NAGLNMENFFAIANHKLTIVEADAEY----TKPFSTDRVML-GPGQTVNVLVTADQPIGKYSMAMGPYMSA 298 (571)
Q Consensus 233 Na~~~~~~~~~i~gh~~~via~DG~~----~~P~~~d~l~l-~pgeR~dv~v~~~~~~g~~~i~~~~~~~~ 298 (571)
| ...+.||||||.|+|++.+|.. ..|.++|++.+ .||+++.|.++++ +||.|.+|||.....
T Consensus 413 N---~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~~H~ 479 (521)
T 1v10_A 413 G---GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHIDWHL 479 (521)
T ss_dssp C---CBSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCHHHH
T ss_pred C---CCCCCEEEccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChHHHH
Confidence 9 3456699999999999999875 26899999999 7999999999988 479999999985443
No 57
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.66 E-value=8.2e-15 Score=155.75 Aligned_cols=244 Identities=14% Similarity=0.158 Sum_probs=162.7
Q ss_pred EEEEEEEEEEEeecCC-------------ceeeEEEECCcCCCceEEEecCCEEEEEEEeC-CCCCeeEEecccccCCCC
Q 039250 34 RFYEFKIQATRVNKLC-------------NAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHGVRQRLSC 99 (571)
Q Consensus 34 ~~~~l~i~~~~~~~~g-------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG~~~~~~~ 99 (571)
.+| |.++......+| .....+++||+.. |+|+|++|+ |+|+.|. ......+|++|.......
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~~-p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa 256 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFK-PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG 256 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEES-CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCccC-ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE
Confidence 455 777776655444 2457899999975 999999999 9999999 567889999998765544
Q ss_pred CCCCCC-----ccccCcCCCCCeEEEEEEeCCCCcceeEeecccccc-------c--ceeeEEEEecCCCCCCC------
Q 039250 100 WFDGPA-----YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLR-------G--TVYGAIVVYPKTGVPYP------ 159 (571)
Q Consensus 100 ~~DG~~-----~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~-------~--Gl~G~liV~~~~~~~~~------ 159 (571)
.||.. .++...|.||||++..+++ .+.|+|-..++..... . ...--+-+... +...|
T Consensus 257 -~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~lP~~l~~~ 333 (481)
T 3zx1_A 257 -TDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-NVELPKNLKIF 333 (481)
T ss_dssp -ETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-CCCCCSCSCCC
T ss_pred -cCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCC-CccCCccccCC
Confidence 59743 2345779999999999999 6678877766543211 0 01111222211 11111
Q ss_pred --CCCCCccEEEEEeeEeeccHHHHHHHHhhCCCCC---CCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeec
Q 039250 160 --FQFPYQEHIIILGEYWLQDVVQLERQVLASGGAP---PPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINA 234 (571)
Q Consensus 160 --~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~---~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa 234 (571)
++..+....+.++....+-. .+...+... .....++|||+.+ . ...+.+.++.|++++|+|.|.
T Consensus 334 ~~~~~~~~~r~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~iNG~~~---~---~~~~~~~~~~G~~v~w~l~N~ 402 (481)
T 3zx1_A 334 KPSEEPKEFKEIIMSEDHMQMH-----GMMGKSEGELKIALASMFLINRKSY---D---LKRIDLSSKLGVVEDWIVINK 402 (481)
T ss_dssp CCCCCCCEEEEEEEEECCSTTT-----TGGGCCHHHHHHHHHTTEEETTBCC---C---TTCCCEEEETTCCEEEEEEEC
T ss_pred CCCCCCCcEEEEEEeccchhcc-----cccccccccccccccceeEECCEeC---C---CCCceEEeCCCCEEEEEEEcC
Confidence 11222333444432110000 000000000 0012589999954 1 134789999999999999997
Q ss_pred CccceEEEEEcCceeEEEEe--CCCCC---CeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccc
Q 039250 235 GLNMENFFAIANHKLTIVEA--DAEYT---KPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 235 ~~~~~~~~~i~gh~~~via~--DG~~~---~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~ 297 (571)
+. ..+.||||||+|+|++. ||... ++.++|++.|.||+++.|.++++ .+|.|.+|||....
T Consensus 403 ~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil~H 468 (481)
T 3zx1_A 403 SH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHILEH 468 (481)
T ss_dssp SS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSHHH
T ss_pred CC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCChHH
Confidence 74 55679999999999999 99765 46799999999999999999997 57999999998543
No 58
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.2e-13 Score=149.43 Aligned_cols=226 Identities=14% Similarity=0.092 Sum_probs=151.3
Q ss_pred eeEEEECCcCCCceEEEecCCEEEEEEEeC-CCCCeeEEecccccCCCCCCCCCCc----cccCcCCCCCeEEEEEEeCC
Q 039250 52 KDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHGVRQRLSCWFDGPAY----ITQCPIQSGQTFTYEFTMFQ 126 (571)
Q Consensus 52 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~~~y~~~~~~ 126 (571)
...+++||+. .|+|+|++|+++++||.|. ......+|.+|....... .||.+- +....|.||||++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 5688999996 4999999999999999999 556778888887655544 599652 34567999999999999953
Q ss_pred C-CcceeEeecccccc--------cceeeEEEEecCCC-CCCC-----------------C------CCCCccEEEEEee
Q 039250 127 Q-KGTFFWHAHVSWLR--------GTVYGAIVVYPKTG-VPYP-----------------F------QFPYQEHIIILGE 173 (571)
Q Consensus 127 ~-~Gt~wYH~H~~~~~--------~Gl~G~liV~~~~~-~~~~-----------------~------~~~~~e~~l~~~d 173 (571)
+ .|.||......... .....+++...... .+.+ + +..++.+.+.+.-
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 57899998754320 01112233222111 0000 0 0111111111100
Q ss_pred EeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCC--------------C----CCCeeEEEEeCCCEEEEEEeecC
Q 039250 174 YWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNC--------------S----ANDVYKIEVVPGKTYLLRLINAG 235 (571)
Q Consensus 174 ~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~--------------~----~~~~p~l~v~~G~~~rlRliNa~ 235 (571)
.. .+ .....++|||+.+..-.. + +.....+.++.|++++|.|.|.+
T Consensus 325 ---~~----------~~---~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 325 ---DN----------LK---NGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp ---EE----------CT---TSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS
T ss_pred ---ec----------cC---CceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC
Confidence 00 00 112357899985421000 0 01135689999999999999998
Q ss_pred ccceEEEEEcCceeEEEEeCCC--------------------CCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecc
Q 039250 236 LNMENFFAIANHKLTIVEADAE--------------------YTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPY 295 (571)
Q Consensus 236 ~~~~~~~~i~gh~~~via~DG~--------------------~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 295 (571)
.. .+.||||||.|+|++.++. +..|..+|++.+.||+.+.|.++++ +||.|.+|||..
T Consensus 389 ~~-~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 389 TG-THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp SS-CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred CC-CCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 54 5669999999999999853 1247899999999999999999997 579999999985
Q ss_pred cc
Q 039250 296 MS 297 (571)
Q Consensus 296 ~~ 297 (571)
..
T Consensus 467 ~H 468 (534)
T 1zpu_A 467 WH 468 (534)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.58 E-value=2.5e-13 Score=145.19 Aligned_cols=244 Identities=17% Similarity=0.188 Sum_probs=152.5
Q ss_pred eeeEEEECCcC---------CCceEEEecCCEEEEEEEeC-CCCCeeEEecccccCCCCCCCCCCc----cccCcCCCCC
Q 039250 51 AKDIVTVNNMF---------PGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHGVRQRLSCWFDGPAY----ITQCPIQSGQ 116 (571)
Q Consensus 51 ~~~~~~~Ng~~---------pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~ 116 (571)
....+++||+- +-|.|+|++|+++++||.|. ......+|.+|....... .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 46789999963 34799999999999999998 456678888887755444 599752 3456799999
Q ss_pred eEEEEEEeCCCCcceeEeeccccc----ccceeeEEEEecCCCCCCCCCCCCc-cEEEEEeeEeeccHHHH-HHHHhhCC
Q 039250 117 TFTYEFTMFQQKGTFFWHAHVSWL----RGTVYGAIVVYPKTGVPYPFQFPYQ-EHIIILGEYWLQDVVQL-ERQVLASG 190 (571)
Q Consensus 117 ~~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~-~~~~~~~g 190 (571)
|++..+++++..|.||..+..... ..|...+++.........|...... ... .+.+......... .......+
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 999999996667999999865311 1233334444432211111000000 000 0000000000000 00000000
Q ss_pred CC--------CCCCCcEEEcCccCCCCCC-----------C----CCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCc
Q 039250 191 GA--------PPPSNAYTINGHPGPNYNC-----------S----ANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANH 247 (571)
Q Consensus 191 ~~--------~~~~~~~~iNG~~~~~~~~-----------~----~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh 247 (571)
.. ......++|||+.+..... + ......+.++.|++++|.|.|......+.||||||
T Consensus 325 ~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 325 GADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp CSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 00 0011257899986421100 0 01235689999999999998433344567999999
Q ss_pred eeEEEEeCCCCC----CeeEeceEEeCC-CceEEEEEEeCCCCceeEEEeecccc
Q 039250 248 KLTIVEADAEYT----KPFSTDRVMLGP-GQTVNVLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 248 ~~~via~DG~~~----~P~~~d~l~l~p-geR~dv~v~~~~~~g~~~i~~~~~~~ 297 (571)
.|+|++.+|... .|...|++.|.+ |+.+.+.++++ +||.|.+|||....
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~~H 458 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHIDWH 458 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCHHH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecchhH
Confidence 999999988654 688999999997 99999999998 57999999998543
No 60
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.58 E-value=7.1e-14 Score=148.48 Aligned_cols=252 Identities=13% Similarity=0.098 Sum_probs=159.8
Q ss_pred EEEEEEEEEEEeecCC--------------ceeeEEEECCcCCCceEEEecCCEEEEEEEeC-CCCCeeEEe-cccccCC
Q 039250 34 RFYEFKIQATRVNKLC--------------NAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHW-HGVRQRL 97 (571)
Q Consensus 34 ~~~~l~i~~~~~~~~g--------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~-HG~~~~~ 97 (571)
.++.|.+++.....+| .....+++||+.. |.+.+ +|+++|+||.|. ......+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~-p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY-PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSS-CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcC-ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 3667777766554333 3456899999964 88876 678999999999 556788888 5765333
Q ss_pred CCCCCCCC-----ccccCcCCCCCeEEEEEEeCCCCcceeEeecccccccce--------eeEEEEec-----CCCCC--
Q 039250 98 SCWFDGPA-----YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGTV--------YGAIVVYP-----KTGVP-- 157 (571)
Q Consensus 98 ~~~~DG~~-----~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl--------~G~liV~~-----~~~~~-- 157 (571)
.. .||.+ .++...|.||||++..+++ .+.++|+.-+..... .|+ .-.+-|.+ ....+
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 305 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDT 305 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcc
Confidence 33 49954 2445779999999999999 667788776543221 111 01122221 11111
Q ss_pred -CCC---CC----CCccEEEEEeeEe-eccHHHHHHHH----hh------------CCCCC--------CCCCcEEEcCc
Q 039250 158 -YPF---QF----PYQEHIIILGEYW-LQDVVQLERQV----LA------------SGGAP--------PPSNAYTINGH 204 (571)
Q Consensus 158 -~~~---~~----~~~e~~l~~~d~~-~~~~~~~~~~~----~~------------~g~~~--------~~~~~~~iNG~ 204 (571)
.++ +. ..+++.+.+..-. ......+...+ +. .|... .....++|||+
T Consensus 306 L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 306 LSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred cccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 011 11 1133333331100 00000000000 00 01000 00113799999
Q ss_pred cCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCC---eeEeceEEeCCCceEEEEEEe
Q 039250 205 PGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK---PFSTDRVMLGPGQTVNVLVTA 281 (571)
Q Consensus 205 ~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~---P~~~d~l~l~pgeR~dv~v~~ 281 (571)
.+. ...+.++++.|+++||+|+|.+....+.|||||++|+|++.||.... +.++|++.|. |+++.|+++|
T Consensus 386 ~~~------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f 458 (488)
T 3od3_A 386 AFD------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKF 458 (488)
T ss_dssp CCC------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECB
T ss_pred eCC------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEe
Confidence 652 13477999999999999999996666789999999999999998774 3589999999 9999999999
Q ss_pred CC---CCceeEEEeecccc
Q 039250 282 DQ---PIGKYSMAMGPYMS 297 (571)
Q Consensus 282 ~~---~~g~~~i~~~~~~~ 297 (571)
++ .+|.|++|||....
T Consensus 459 ~~~~~~~G~~m~HCH~l~H 477 (488)
T 3od3_A 459 NHDAPKEHAYMAHCHLLEH 477 (488)
T ss_dssp CSCCCGGGCEEEEESSHHH
T ss_pred ccCCCCCCCEEEeCCchHH
Confidence 75 35899999998543
No 61
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.57 E-value=2e-13 Score=148.75 Aligned_cols=215 Identities=11% Similarity=0.080 Sum_probs=141.1
Q ss_pred eEEEecCCEEEEEEEeC-CCCCeeEEecccccCCCCCCCCCC----ccccCcCCCCCeEEEEEEe-CCCCcceeEeeccc
Q 039250 65 VVYAQEDDRIIVKVTNQ-SPYNATIHWHGVRQRLSCWFDGPA----YITQCPIQSGQTFTYEFTM-FQQKGTFFWHAHVS 138 (571)
Q Consensus 65 ~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG~~~~~~~~~DG~~----~~~q~~i~PG~~~~y~~~~-~~~~Gt~wYH~H~~ 138 (571)
+|+|++|+++++||.|. ......+|++|....... .||.+ .+....|.||||++..+++ .+.+|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 89999999999999999 445678899887765444 59965 2345679999999999998 34589999999875
Q ss_pred cc---ccceeeEEEEecCCCCCCC------CC--------------------------CCCccEEEEEeeEeeccHHHHH
Q 039250 139 WL---RGTVYGAIVVYPKTGVPYP------FQ--------------------------FPYQEHIIILGEYWLQDVVQLE 183 (571)
Q Consensus 139 ~~---~~Gl~G~liV~~~~~~~~~------~~--------------------------~~~~e~~l~~~d~~~~~~~~~~ 183 (571)
.. .....+.|-.........+ .+ ..++.+.+.++.-.
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~-------- 355 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNV-------- 355 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEE--------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeecc--------
Confidence 31 1112233333322210000 00 01111111111000
Q ss_pred HHHhhCCCCCCCCCcEEEcCccCCC-----------------------------CCCCC--------CCeeEEEEeCCCE
Q 039250 184 RQVLASGGAPPPSNAYTINGHPGPN-----------------------------YNCSA--------NDVYKIEVVPGKT 226 (571)
Q Consensus 184 ~~~~~~g~~~~~~~~~~iNG~~~~~-----------------------------~~~~~--------~~~p~l~v~~G~~ 226 (571)
. .....++|||+.+.. |+.+. .....+.++.|++
T Consensus 356 ----~-----~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 356 ----I-----NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp ----E-----TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred ----C-----CCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 0 001135667663210 00000 0124589999999
Q ss_pred EEEEEeecCc-----cceEEEEEcCceeEEEEeC-CCC----------CCeeEeceEEeCCCceEEEEEEeCCCCceeEE
Q 039250 227 YLLRLINAGL-----NMENFFAIANHKLTIVEAD-AEY----------TKPFSTDRVMLGPGQTVNVLVTADQPIGKYSM 290 (571)
Q Consensus 227 ~rlRliNa~~-----~~~~~~~i~gh~~~via~D-G~~----------~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i 290 (571)
++|.|.|.+. ...+.||||||.|+|++.. |.+ ..|..+|++.|.||+.+.|.++++ +||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEE
Confidence 9999999875 3457799999999999984 653 368899999999999999999998 4799999
Q ss_pred Eeeccccc
Q 039250 291 AMGPYMSA 298 (571)
Q Consensus 291 ~~~~~~~~ 298 (571)
|||.....
T Consensus 506 HCHi~~H~ 513 (552)
T 1aoz_A 506 HCHIEPHL 513 (552)
T ss_dssp EESSHHHH
T ss_pred EeeehhHh
Confidence 99986443
No 62
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.56 E-value=6e-13 Score=145.05 Aligned_cols=234 Identities=13% Similarity=0.064 Sum_probs=148.1
Q ss_pred eeeEEEECCcCCCceEEEecCCEEEEEEEeC-CCCCeeEEeccc---------ccCCCCCCCCCCc-----cc------c
Q 039250 51 AKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHGV---------RQRLSCWFDGPAY-----IT------Q 109 (571)
Q Consensus 51 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG~---------~~~~~~~~DG~~~-----~~------q 109 (571)
....+++||+. .|.+.|++| ++++||.|. ......+++.|. .+.. .||.+. +. .
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa---~DG~~l~~P~~~~~~~~~~~ 327 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE---eCCeEccCCEEecccCcccE
Confidence 45778999996 499999999 999999999 567788888664 3333 499652 33 5
Q ss_pred CcCCCCCeEEEEEEeCCCCcc-eeEeecccccccc-----------eeeEEEEecCC-CCCCCCCCC----------C--
Q 039250 110 CPIQSGQTFTYEFTMFQQKGT-FFWHAHVSWLRGT-----------VYGAIVVYPKT-GVPYPFQFP----------Y-- 164 (571)
Q Consensus 110 ~~i~PG~~~~y~~~~~~~~Gt-~wYH~H~~~~~~G-----------l~G~liV~~~~-~~~~~~~~~----------~-- 164 (571)
..|.||||++.-+++.+.+|+ ++...-......| ..--|.|..+. ......+.. +
T Consensus 328 l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~ 407 (612)
T 2g23_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccc
Confidence 679999999999999655675 6655543211111 11124444322 111111100 0
Q ss_pred -ccEEEEEe------------eEeeccHHHHHHHHh-h-CC-----CCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCC
Q 039250 165 -QEHIIILG------------EYWLQDVVQLERQVL-A-SG-----GAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPG 224 (571)
Q Consensus 165 -~e~~l~~~------------d~~~~~~~~~~~~~~-~-~g-----~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G 224 (571)
....+.+. -|........ .... . .+ ........++|||+.+ ...+.++++.|
T Consensus 408 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~-------~~~~~~~v~~G 479 (612)
T 2g23_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDP-ADVQVPAEGVIQVTGADGRTKTYRRTAATF-------NDGLGFTIGEG 479 (612)
T ss_dssp CEEEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEETT
T ss_pred cceeEEeeccccccccccccceeeccccccc-cccccccccceeeeccCCceeEEEECCccC-------CCCCceEecCC
Confidence 01122221 0111100000 0000 0 00 0001123588999954 24578999999
Q ss_pred CEEEEEEeecCccceEEEEEcCceeEEEEeCCC------------------------CC---CeeEeceEEeCCCceEEE
Q 039250 225 KTYLLRLINAGLNMENFFAIANHKLTIVEADAE------------------------YT---KPFSTDRVMLGPGQTVNV 277 (571)
Q Consensus 225 ~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~------------------------~~---~P~~~d~l~l~pgeR~dv 277 (571)
++++|+|+|.+. ..+.||||||.|+|++.+|. .+ ++.++|++.|.||+++.|
T Consensus 480 ~~v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i 558 (612)
T 2g23_A 480 THEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRV 558 (612)
T ss_dssp CEEEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEE
T ss_pred CEEEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEE
Confidence 999999999984 45679999999999987531 12 334799999999999999
Q ss_pred EEEeCCCCceeEEEeeccccc
Q 039250 278 LVTADQPIGKYSMAMGPYMSA 298 (571)
Q Consensus 278 ~v~~~~~~g~~~i~~~~~~~~ 298 (571)
.++++..+|.|.+|||.....
T Consensus 559 ~~~~~~~pG~w~~HCHil~He 579 (612)
T 2g23_A 559 MGKFDGAYGRFMYHCHLLEHE 579 (612)
T ss_dssp EEECCSCCEEEEEEESSHHHH
T ss_pred EEEeCCCCccEEEEeCchhHh
Confidence 999996689999999986443
No 63
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.56 E-value=3.9e-13 Score=143.71 Aligned_cols=243 Identities=16% Similarity=0.159 Sum_probs=151.4
Q ss_pred eeeEEEECCcC--------CCceEEEecCCEEEEEEEeC-CCCCeeEEecccccCCCCCCCCCC----ccccCcCCCCCe
Q 039250 51 AKDIVTVNNMF--------PGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHGVRQRLSCWFDGPA----YITQCPIQSGQT 117 (571)
Q Consensus 51 ~~~~~~~Ng~~--------pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG~~~~~~~~~DG~~----~~~q~~i~PG~~ 117 (571)
....+++||+- +-|.|+|++|+++++||.|. ......+|.+|....... .||.+ .+....|.||||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 46789999973 34799999999999999999 456788999888765544 59975 233567999999
Q ss_pred EEEEEEeCCCCcceeEeeccccc----ccceeeEEEEecCCCCCCCCCCCCccEEEEEeeEeeccHHHH-HHHHhhCCCC
Q 039250 118 FTYEFTMFQQKGTFFWHAHVSWL----RGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQL-ERQVLASGGA 192 (571)
Q Consensus 118 ~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-~~~~~~~g~~ 192 (571)
++..+++++..|.||-.+..... ..+..-+++.........+........ ..+.+......... .......+..
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCC
Confidence 99999996667999998764311 112222344333221111100000000 00000000000000 0000000000
Q ss_pred --------CCCCCcEEEcCccCCCCCC-------C--------CCCeeEEEEeCCCEEEEEEee---cCccceEEEEEcC
Q 039250 193 --------PPPSNAYTINGHPGPNYNC-------S--------ANDVYKIEVVPGKTYLLRLIN---AGLNMENFFAIAN 246 (571)
Q Consensus 193 --------~~~~~~~~iNG~~~~~~~~-------~--------~~~~p~l~v~~G~~~rlRliN---a~~~~~~~~~i~g 246 (571)
......++|||+.+..... + ....+.+.++.|++++|.|.| .+ ...+.|||||
T Consensus 323 d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~-~~~HP~HLHG 401 (499)
T 3pxl_A 323 DKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAP-GAPHPFHLHG 401 (499)
T ss_dssp SEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSC-SCSCEEEETT
T ss_pred cEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccC-CCCccceecC
Confidence 0012267899986421000 0 012357899999999999994 33 3446699999
Q ss_pred ceeEEEEeCCCCC----CeeEeceEEeCC---CceEEEEEEeCCCCceeEEEeecccc
Q 039250 247 HKLTIVEADAEYT----KPFSTDRVMLGP---GQTVNVLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 247 h~~~via~DG~~~----~P~~~d~l~l~p---geR~dv~v~~~~~~g~~~i~~~~~~~ 297 (571)
|.|+|++.+|... .|...|++.|.+ |+.+.+.++++ +||.|.+|||....
T Consensus 402 h~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~~H 458 (499)
T 3pxl_A 402 HTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHIDFH 458 (499)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSHHH
T ss_pred CcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCChhH
Confidence 9999999988643 688999999986 99999999988 57999999997543
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.54 E-value=6.6e-13 Score=144.49 Aligned_cols=229 Identities=11% Similarity=0.071 Sum_probs=148.9
Q ss_pred eeeEEEECCcCC--------CceEEEecCCEEEEEEEeCC-CCCeeEEecccccCCCCCCCCCCc----cccCcCCCCCe
Q 039250 51 AKDIVTVNNMFP--------GPVVYAQEDDRIIVKVTNQS-PYNATIHWHGVRQRLSCWFDGPAY----ITQCPIQSGQT 117 (571)
Q Consensus 51 ~~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~ 117 (571)
....+++||+.. -|+|+|++|+++++||.|.. .....+|++|....... .||.+- +....|.||||
T Consensus 194 ~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR 272 (559)
T 2q9o_A 194 FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQR 272 (559)
T ss_dssp CBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCE
T ss_pred ccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEE
Confidence 356789999873 37999999999999999994 45678999988765444 599762 34567999999
Q ss_pred EEEEEEeCCCCcceeEeecc--ccc---c-cc-eeeEEEEecCCCCCCCC----CCCC----c-----------------
Q 039250 118 FTYEFTMFQQKGTFFWHAHV--SWL---R-GT-VYGAIVVYPKTGVPYPF----QFPY----Q----------------- 165 (571)
Q Consensus 118 ~~y~~~~~~~~Gt~wYH~H~--~~~---~-~G-l~G~liV~~~~~~~~~~----~~~~----~----------------- 165 (571)
++..++++...|.||..... ... . .. ..+.+-...... ..|. ...+ .
T Consensus 273 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~ 351 (559)
T 2q9o_A 273 YDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSF 351 (559)
T ss_dssp EEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTC
T ss_pred EEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCccc
Confidence 99999996568999998876 211 1 11 123333322211 1010 0000 0
Q ss_pred ----cEEEEEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCC-------------CCeeEEEEeCCCEEE
Q 039250 166 ----EHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSA-------------NDVYKIEVVPGKTYL 228 (571)
Q Consensus 166 ----e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~-------------~~~p~l~v~~G~~~r 228 (571)
++.+.+.- ..+ ......++|||+......... .....+.+..++.++
T Consensus 352 ~~~~~~~~~~~~--------------~~~--~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~ 415 (559)
T 2q9o_A 352 VKRPDNTLPVAL--------------DLT--GTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWT 415 (559)
T ss_dssp CCCGGGEEEEEE--------------ECS--SSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEE
T ss_pred ccceeEEEEEEe--------------ecC--CCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEE
Confidence 00111100 000 011236889999642110000 012357787776676
Q ss_pred EEEeecCc----cceEEEEEcCceeEEEEeCC---------CC------------CCeeEeceEEeCCCceEEEEEEeCC
Q 039250 229 LRLINAGL----NMENFFAIANHKLTIVEADA---------EY------------TKPFSTDRVMLGPGQTVNVLVTADQ 283 (571)
Q Consensus 229 lRliNa~~----~~~~~~~i~gh~~~via~DG---------~~------------~~P~~~d~l~l~pgeR~dv~v~~~~ 283 (571)
+.++|... ...+.||||||.|+|++.++ .. ..|..+|++.|.+|+++.|.++++
T Consensus 416 ~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad- 494 (559)
T 2q9o_A 416 YWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD- 494 (559)
T ss_dssp EEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-
T ss_pred EEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-
Confidence 66666643 45678999999999999987 32 147799999999999999999987
Q ss_pred CCceeEEEeeccccc
Q 039250 284 PIGKYSMAMGPYMSA 298 (571)
Q Consensus 284 ~~g~~~i~~~~~~~~ 298 (571)
+||.|.+|||.....
T Consensus 495 NPG~W~~HCHil~H~ 509 (559)
T 2q9o_A 495 NPGAWLFHCHIAWHV 509 (559)
T ss_dssp SCEEEEEEECCHHHH
T ss_pred CCeeEEEEecchhHh
Confidence 479999999986443
No 65
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.54 E-value=2.6e-15 Score=126.39 Aligned_cols=90 Identities=16% Similarity=0.114 Sum_probs=70.7
Q ss_pred CcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCC--CCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeec
Q 039250 59 NMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLS--CWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAH 136 (571)
Q Consensus 59 g~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~--~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H 136 (571)
-++++|+|++++||+|+ ++|..+.++++||||...+.. ..+||.+ .+++.|.||++++|+|+++.++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 36778999999999975 679988999999999876531 0112222 245789999999999988668999999999
Q ss_pred ccccccceeeEEEEec
Q 039250 137 VSWLRGTVYGAIVVYP 152 (571)
Q Consensus 137 ~~~~~~Gl~G~liV~~ 152 (571)
.|. .+||.|.|+|++
T Consensus 91 ~H~-~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHR-GAGMVGKITVEG 105 (105)
T ss_dssp TTG-GGTCEEEEEECC
T ss_pred Cch-hcCCEEEEEEcC
Confidence 543 459999999964
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.54 E-value=2.8e-13 Score=143.46 Aligned_cols=230 Identities=16% Similarity=0.126 Sum_probs=154.1
Q ss_pred EEEEEEEEEEEeec-------------CCceeeEEEECCcCCCceEEEecCCEEEEEEEeC-CCCCeeEEe--cc---cc
Q 039250 34 RFYEFKIQATRVNK-------------LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHW--HG---VR 94 (571)
Q Consensus 34 ~~~~l~i~~~~~~~-------------~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~--HG---~~ 94 (571)
+++.|.+++..... .|.....+++||+.. |+|+|++| ++++|+.|. ......+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~-p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVKD-AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEET-CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCccc-ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56677776654332 134567899999974 99999999 999999999 456788999 77 44
Q ss_pred cCCCCCCCCCCc-----cccCcCCCCCeEEEEEEeCCCCcceeEeecccccc-------------cc-ee--eEEEEecC
Q 039250 95 QRLSCWFDGPAY-----ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLR-------------GT-VY--GAIVVYPK 153 (571)
Q Consensus 95 ~~~~~~~DG~~~-----~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~-------------~G-l~--G~liV~~~ 153 (571)
..... .||.+- +....|.||||++..+++ . .+.||..++..... .+ -. ..+.+...
T Consensus 216 ~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRLIA-VDQGFLARPIEVRALFLAPAERAEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEEEE-eCCCccCCceEeceEEECCcceEEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 33332 499652 335679999999999998 4 47889888753210 00 01 11222221
Q ss_pred CCC--CCC---CC----CCCccEEEEEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEE-EeC
Q 039250 154 TGV--PYP---FQ----FPYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIE-VVP 223 (571)
Q Consensus 154 ~~~--~~~---~~----~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~-v~~ 223 (571)
... +.. ++ ....+..+.+.. + ...++|||+.+. . ..+.+. ++.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~----------------~-----~~~~~iNg~~~~---~---~~p~~~~~~~ 345 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL----------------S-----GMQWTINGMFWN---A---SNPLFEHVSV 345 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE----------------E-----TTEEEETTBCCC---T---TCTTCCCEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC----------------C-----CceeeECCCcCC---C---CCCceeccCC
Confidence 110 000 00 011122222210 0 114889999652 1 235567 899
Q ss_pred CCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCC------------Ce---eEeceEEeCCCceEEEEEEeC---C-C
Q 039250 224 GKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYT------------KP---FSTDRVMLGPGQTVNVLVTAD---Q-P 284 (571)
Q Consensus 224 G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~------------~P---~~~d~l~l~pgeR~dv~v~~~---~-~ 284 (571)
|++++|+|.|.+....+.||||||.|+|++.+|... .| .++|++.+.||+++.+.+++. . +
T Consensus 346 g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adn 425 (448)
T 3aw5_A 346 EGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQ 425 (448)
T ss_dssp CEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTC
T ss_pred CCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCC
Confidence 999999999998445567999999999999999764 23 589999999999999997775 2 3
Q ss_pred CceeEEEeecccc
Q 039250 285 IGKYSMAMGPYMS 297 (571)
Q Consensus 285 ~g~~~i~~~~~~~ 297 (571)
| |.+|||....
T Consensus 426 p--w~~HCHil~H 436 (448)
T 3aw5_A 426 L--FPFHCHNLEH 436 (448)
T ss_dssp E--EEEEESSHHH
T ss_pred c--EEEEcCChHH
Confidence 4 9999998543
No 67
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.49 E-value=7e-13 Score=143.01 Aligned_cols=220 Identities=10% Similarity=0.028 Sum_probs=142.4
Q ss_pred eeeEEEECCcCCCceEEEecCCEEEEEEEeCC-CCCeeEEeccc-ccCCCCCCCCCCc-----cccCcCCCCCeEEEEEE
Q 039250 51 AKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQS-PYNATIHWHGV-RQRLSCWFDGPAY-----ITQCPIQSGQTFTYEFT 123 (571)
Q Consensus 51 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~~iH~HG~-~~~~~~~~DG~~~-----~~q~~i~PG~~~~y~~~ 123 (571)
....+++||+. .|.|.++.| ++++|+.|.. .....+|+.|. ...... .||.+. +....|.||||++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc-cCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 35778999997 599999885 9999999994 45678999876 433333 499542 34577999999999999
Q ss_pred eCCCCcceeEeecccccc-----cce-eeEEEEecCC--C----CCCC--CCC--------CCccEEEEEeeEeeccHHH
Q 039250 124 MFQQKGTFFWHAHVSWLR-----GTV-YGAIVVYPKT--G----VPYP--FQF--------PYQEHIIILGEYWLQDVVQ 181 (571)
Q Consensus 124 ~~~~~Gt~wYH~H~~~~~-----~Gl-~G~liV~~~~--~----~~~~--~~~--------~~~e~~l~~~d~~~~~~~~ 181 (571)
++..+|.+ |........ ... ...+-..... . ...| +.. ...+..+.+....
T Consensus 306 ~~~~~g~~-~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~------ 378 (513)
T 2wsd_A 306 FTAYEGES-IILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQ------ 378 (513)
T ss_dssp CGGGTTCE-EEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEE------
T ss_pred CCCCCCcE-EEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeec------
Confidence 95546773 332211100 011 1222222111 0 1111 100 0111222221110
Q ss_pred HHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCC----
Q 039250 182 LERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAE---- 257 (571)
Q Consensus 182 ~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~---- 257 (571)
.. .....++|||+.+. ....+.++.|++++|+|.|.+.. .+.||||||.|+|++.+|.
T Consensus 379 -------~~---~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~ 440 (513)
T 2wsd_A 379 -------DE---YGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIAR 440 (513)
T ss_dssp -------CT---TSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHH
T ss_pred -------CC---CCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCccccc
Confidence 00 01125679999641 23457899999999999999854 5669999999999998751
Q ss_pred -----------C-C-----CeeEeceEEeCCCceEEEEEEeCCCCceeEEEeeccccc
Q 039250 258 -----------Y-T-----KPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSA 298 (571)
Q Consensus 258 -----------~-~-----~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~ 298 (571)
+ . ++.++|++.|.||+++.|++++++.||.|.+|||.....
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~ 498 (513)
T 2wsd_A 441 YQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHE 498 (513)
T ss_dssp HHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHH
T ss_pred ccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhh
Confidence 1 0 235899999999999999999966689999999986443
No 68
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.46 E-value=1.3e-12 Score=141.03 Aligned_cols=246 Identities=14% Similarity=0.084 Sum_probs=154.9
Q ss_pred EEEEEEEEEEeecCC-----------ceeeEEEECCcCCCceEEEecCCEEEEEEEeC-CCCCeeEEecc---------c
Q 039250 35 FYEFKIQATRVNKLC-----------NAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHG---------V 93 (571)
Q Consensus 35 ~~~l~i~~~~~~~~g-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG---------~ 93 (571)
++.|.++......+| .....+++||+. .|.|.|++| ++|+||.|. ......++++| +
T Consensus 173 d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~ 250 (534)
T 3abg_A 173 DIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPF 250 (534)
T ss_dssp SCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCE
T ss_pred eEEEEEeeeeecCCCceeccCCCCccccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccE
Confidence 345666655444332 235689999996 599999985 999999999 45667899865 3
Q ss_pred ccCCCCCCCCCC-----ccccCcCCCCCeEEEEEEeCCCCc-ceeEeecccccc--------cceeeEEEEecCCC----
Q 039250 94 RQRLSCWFDGPA-----YITQCPIQSGQTFTYEFTMFQQKG-TFFWHAHVSWLR--------GTVYGAIVVYPKTG---- 155 (571)
Q Consensus 94 ~~~~~~~~DG~~-----~~~q~~i~PG~~~~y~~~~~~~~G-t~wYH~H~~~~~--------~Gl~G~liV~~~~~---- 155 (571)
.+.. .||.. .+....|.||||++..++++..+| +||......... ....+.+-......
T Consensus 251 ~vIa---~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 327 (534)
T 3abg_A 251 KVIA---SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQP 327 (534)
T ss_dssp EEEE---ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCS
T ss_pred EEEE---eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCC
Confidence 3333 49863 244577999999999999855578 587765321100 00112222221110
Q ss_pred --CCCCC-------CC--CCccEEEEEeeEeeccHHHHHHHHhhCCCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeCC
Q 039250 156 --VPYPF-------QF--PYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPG 224 (571)
Q Consensus 156 --~~~~~-------~~--~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~G 224 (571)
...|. +. ...+..+.+ + .....++|||+.... ......+.++.|
T Consensus 328 ~~~~~P~~L~~~~~p~~~~~~~~~~~~------------------~---~~~~~w~iNG~~f~~----~~~p~l~~v~~G 382 (534)
T 3abg_A 328 DTSVVPANLRDVPFPSPTTNTPRQFRF------------------G---RTGPTWTINGVAFAD----VQNRLLANVPVG 382 (534)
T ss_dssp CCCCCCCCCCCCSCCCCCCCCCEEEEC------------------S---CCCSTTCCCCBTTBC----TTSCCCCEECTT
T ss_pred CCCCCccccccCCCCCCccccceEEEE------------------e---ccCceeEECCcccCC----CCCcceeeccCC
Confidence 00000 00 000111111 0 011257899995411 111234689999
Q ss_pred CEEEEEEeecCccceEEEEEcCceeEEEEe-CCC---CCCe---eEeceEEeCCCceEEEEEEeCCCCceeEEEeecccc
Q 039250 225 KTYLLRLINAGLNMENFFAIANHKLTIVEA-DAE---YTKP---FSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 225 ~~~rlRliNa~~~~~~~~~i~gh~~~via~-DG~---~~~P---~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~ 297 (571)
++++|.|.|.+....+.||||||.|+|++. +|. ...+ .++|++.|.||+++.|.+.+.++||.|.+|||....
T Consensus 383 ~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H 462 (534)
T 3abg_A 383 TVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIH 462 (534)
T ss_dssp CEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHH
T ss_pred CEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHH
Confidence 999999999986556679999999999998 663 1112 578999999999999999844468999999998644
Q ss_pred cCCCccCCcceEEEEEEcC
Q 039250 298 AQGVSFQNISAIAYFQYLG 316 (571)
Q Consensus 298 ~~~~~~~~~~~~ail~y~~ 316 (571)
... ...+.+.+..
T Consensus 463 ~d~------GMm~~~~V~~ 475 (534)
T 3abg_A 463 EDH------DMMAAFNATV 475 (534)
T ss_dssp HHT------TCEEEEEECS
T ss_pred Hhc------CCceEEEEEe
Confidence 321 2345566553
No 69
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.43 E-value=6.7e-13 Score=112.94 Aligned_cols=104 Identities=21% Similarity=0.178 Sum_probs=80.4
Q ss_pred EEEEEEEEEEee-----cCCceeeE-EEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccc
Q 039250 35 FYEFKIQATRVN-----KLCNAKDI-VTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYIT 108 (571)
Q Consensus 35 ~~~l~i~~~~~~-----~~g~~~~~-~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 108 (571)
.|.+.+.+.... .+|..... ..+|++++++.|++++||+|+++++|.... +||+.... .|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---- 69 (112)
T 1iby_A 3 NFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---- 69 (112)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE----
T ss_pred ceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc----
Confidence 455555554432 23566556 489999998999999999999999999755 56665442 232
Q ss_pred cCcCCCCCeEEEEEEeCCCCcceeEeecccccccceeeEEEEec
Q 039250 109 QCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGTVYGAIVVYP 152 (571)
Q Consensus 109 q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 152 (571)
+..+.||++++|.|++ +++|+||||||.+...++|.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3679999999999998 899999999999876656999999964
No 70
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.31 E-value=7.7e-12 Score=112.20 Aligned_cols=99 Identities=14% Similarity=0.166 Sum_probs=72.0
Q ss_pred CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCC------Cccc-cCcCCCCC--eE
Q 039250 48 LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGP------AYIT-QCPIQSGQ--TF 118 (571)
Q Consensus 48 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~------~~~~-q~~i~PG~--~~ 118 (571)
.+...+...++|. ++|+|+|++||+|+++++|... ...|.+.+...+..+.+.. ++.. ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3566666777777 5799999999999999999732 3467776665554432210 0000 02689999 88
Q ss_pred EEEEEeCCCCcceeEeecccccc-cceeeEEEEe
Q 039250 119 TYEFTMFQQKGTFFWHAHVSWLR-GTVYGAIVVY 151 (571)
Q Consensus 119 ~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 151 (571)
+|.|++ ++||||||||..+.. +||.|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999986 899999999986554 5999999984
No 71
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.30 E-value=1.3e-10 Score=125.77 Aligned_cols=241 Identities=10% Similarity=0.025 Sum_probs=146.1
Q ss_pred eeeEEEECCcCC----------------CceEEEecCCEEEEEEEeC-CCCCeeEEecccccCCCCCCCCCC----cccc
Q 039250 51 AKDIVTVNNMFP----------------GPVVYAQEDDRIIVKVTNQ-SPYNATIHWHGVRQRLSCWFDGPA----YITQ 109 (571)
Q Consensus 51 ~~~~~~~Ng~~p----------------gP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG~~~~~~~~~DG~~----~~~q 109 (571)
.....++||+.. .++|++++|+++++||.|. ......+|.+|....... .||.+ .+..
T Consensus 224 ~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~ 302 (580)
T 3sqr_A 224 ALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDT 302 (580)
T ss_dssp CBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESS
T ss_pred CCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeE
Confidence 345689999742 3799999999999999999 445678888887765544 59976 2345
Q ss_pred CcCCCCCeEEEEEEeCCCCcceeEeecccc-----cccceeeEEEEecCCCCCCCCC-C-CCccEEEEEee--EeeccH-
Q 039250 110 CPIQSGQTFTYEFTMFQQKGTFFWHAHVSW-----LRGTVYGAIVVYPKTGVPYPFQ-F-PYQEHIIILGE--YWLQDV- 179 (571)
Q Consensus 110 ~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~-----~~~Gl~G~liV~~~~~~~~~~~-~-~~~e~~l~~~d--~~~~~~- 179 (571)
..|.||||++..+++++..|.||-.+.... ...+..-+++.........|-. . ...+. .+.+ ......
T Consensus 303 l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~ 380 (580)
T 3sqr_A 303 LLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHL 380 (580)
T ss_dssp EEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSS
T ss_pred EEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCC
Confidence 679999999999999767899999987642 1112222333333221111100 0 00000 0000 000000
Q ss_pred -HHHHHHH-----hhCCCCCCCCCcEEEcCccCCCC-CC-------CC-----CCeeEEEE----eCCCEEEEEEeecCc
Q 039250 180 -VQLERQV-----LASGGAPPPSNAYTINGHPGPNY-NC-------SA-----NDVYKIEV----VPGKTYLLRLINAGL 236 (571)
Q Consensus 180 -~~~~~~~-----~~~g~~~~~~~~~~iNG~~~~~~-~~-------~~-----~~~p~l~v----~~G~~~rlRliNa~~ 236 (571)
....... ..-+ ....-.+.|||...... .. ++ ...-.+.+ +.|+++.|.|-|.+.
T Consensus 381 ~~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~ 458 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTG 458 (580)
T ss_dssp CCBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSS
T ss_pred CCCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCc
Confidence 0000000 0000 00112467888754210 00 00 01112344 359999999999871
Q ss_pred -cceEEEEEcCceeEEEEeCCC------------CCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeecccc
Q 039250 237 -NMENFFAIANHKLTIVEADAE------------YTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 237 -~~~~~~~i~gh~~~via~DG~------------~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~ 297 (571)
...+.||||||.|+|++.+.. +..|...|++.+.|++.+.+.++++ +||.|.+|||....
T Consensus 459 ~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~~H 531 (580)
T 3sqr_A 459 FGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIAWH 531 (580)
T ss_dssp SCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSHHH
T ss_pred cccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcHHH
Confidence 246679999999999998432 2258899999999999999999998 57999999997543
No 72
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.26 E-value=1.9e-10 Score=127.22 Aligned_cols=234 Identities=15% Similarity=0.087 Sum_probs=137.3
Q ss_pred ceeeEEEECCcCCCceEEEecCCEEEEEEEeC-CCCCeeEEecc---------cccCCCCCCCCCCc-----------cc
Q 039250 50 NAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQ-SPYNATIHWHG---------VRQRLSCWFDGPAY-----------IT 108 (571)
Q Consensus 50 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~-l~~~~~iH~HG---------~~~~~~~~~DG~~~-----------~~ 108 (571)
......++||+. -|.+.++. .++|+||.|. ......+.+-| +.+.. .||... ++
T Consensus 252 ~~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa---~DG~~l~~Pv~v~~p~~~~ 326 (612)
T 3gyr_A 252 FFGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLP 326 (612)
T ss_dssp CCCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSS
T ss_pred ccCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE---eCCCccccceeccCccccc
Confidence 345678999997 49999875 5899999999 45566666644 33333 388431 23
Q ss_pred cCcCCCCCeEEEEEEeCCCCcceeEeecccc-cc-------cce----eeEEEEecCCC-CCCCCC------------CC
Q 039250 109 QCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW-LR-------GTV----YGAIVVYPKTG-VPYPFQ------------FP 163 (571)
Q Consensus 109 q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~-~~-------~Gl----~G~liV~~~~~-~~~~~~------------~~ 163 (571)
...|.||||++.-+++++..|.+|+-..... .. .+. .-.+.+.+... .....+ ..
T Consensus 327 ~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 406 (612)
T 3gyr_A 327 VLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDI 406 (612)
T ss_dssp SEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTS
T ss_pred EEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccccccccc
Confidence 4679999999999999655666655433211 00 011 11122221111 000000 00
Q ss_pred CccE-EEEEee------------EeeccHHHHHHHHhhC-------CCCCCCCCcEEEcCccCCCCCCCCCCeeEEEEeC
Q 039250 164 YQEH-IIILGE------------YWLQDVVQLERQVLAS-------GGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVP 223 (571)
Q Consensus 164 ~~e~-~l~~~d------------~~~~~~~~~~~~~~~~-------g~~~~~~~~~~iNG~~~~~~~~~~~~~p~l~v~~ 223 (571)
.... ...+.. +........ ...... .........+.+||+.. .....+.++.
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~-------~~~~~~~~~~ 478 (612)
T 3gyr_A 407 PHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDP-ADVQVPAEGVIQVTGADGRTKTYRRTARTF-------NDGLGFTIGE 478 (612)
T ss_dssp CCEEEEEEEECTTCTTTTTCCEEEEEEECC------CCSCTTEEEEECTTSCEEEEEEEECST-------TSCCCEEEET
T ss_pred cccccccccccccccccccccccccccccccc-ccccccccceeeeccCCCccccccccCccC-------CCCcceEeCC
Confidence 0001 111100 000000000 000000 00011223456777643 1346789999
Q ss_pred CCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCC---------------------------CeeEeceEEeCCCceEE
Q 039250 224 GKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYT---------------------------KPFSTDRVMLGPGQTVN 276 (571)
Q Consensus 224 G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~---------------------------~P~~~d~l~l~pgeR~d 276 (571)
|++++|.|.|.+... +.||||||.|+|++.+|... ++.++|++.+.+|+.+.
T Consensus 479 g~~~~w~i~N~~~~~-HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~ 557 (612)
T 3gyr_A 479 GTHEQWTFLNLSPIL-HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLR 557 (612)
T ss_dssp TCEEEEEEEECSSSC-EEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEE
T ss_pred CCEEEEEEEcCCCCC-cCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEE
Confidence 999999999998654 56999999999998765311 23368999999999999
Q ss_pred EEEEeCCCCceeEEEeecccc
Q 039250 277 VLVTADQPIGKYSMAMGPYMS 297 (571)
Q Consensus 277 v~v~~~~~~g~~~i~~~~~~~ 297 (571)
|.+++.++||.|.+|||....
T Consensus 558 i~~rfadnpG~w~~HCHil~H 578 (612)
T 3gyr_A 558 VMGKFDGAYGRFMYHCHLLEH 578 (612)
T ss_dssp EEEECCSCCEEEEEEESSHHH
T ss_pred EEEEeCCCCcceEEcCCChHH
Confidence 999976678999999998654
No 73
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.22 E-value=2.4e-11 Score=123.94 Aligned_cols=100 Identities=24% Similarity=0.331 Sum_probs=80.5
Q ss_pred EEECCcC--CCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCC--------ccccCcCCCCCeEEEEEEe
Q 039250 55 VTVNNMF--PGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPA--------YITQCPIQSGQTFTYEFTM 124 (571)
Q Consensus 55 ~~~Ng~~--pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~--------~~~q~~i~PG~~~~y~~~~ 124 (571)
|+|||+. ..|.|++++||+|+++|.|.....+.+|+||....... +|.. ......|.||++++|.|++
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~--~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNR--TGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSS--SSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEec--cCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 5899986 46899999999999999999889999999998744322 4421 1234679999999999996
Q ss_pred --CCCCcceeEeecccccc-cceeeEEEEecCCCC
Q 039250 125 --FQQKGTFFWHAHVSWLR-GTVYGAIVVYPKTGV 156 (571)
Q Consensus 125 --~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 156 (571)
.+.+|+|+||||..... .||.|.++|.+++..
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCC
Confidence 26799999999986543 599999999987653
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.21 E-value=3.5e-11 Score=129.25 Aligned_cols=96 Identities=22% Similarity=0.208 Sum_probs=75.6
Q ss_pred CCceeeEEEECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCC
Q 039250 48 LCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQ 127 (571)
Q Consensus 48 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~ 127 (571)
++.+..+|++|+++++|+|++++||+|+++++|.....-. +||+.+.. .|+. ..+.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv~----~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGVA----MEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTEE----EEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCcc----eeeCCCCeEEEEEEC-CC
Confidence 3577889999999999999999999999999998543111 36665543 3332 679999999999999 89
Q ss_pred CcceeEeeccc--ccccceeeEEEEecCC
Q 039250 128 KGTFFWHAHVS--WLRGTVYGAIVVYPKT 154 (571)
Q Consensus 128 ~Gt~wYH~H~~--~~~~Gl~G~liV~~~~ 154 (571)
+|+||||||.. ....||.|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999932 1124999999998764
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.15 E-value=1.7e-10 Score=96.72 Aligned_cols=79 Identities=18% Similarity=0.280 Sum_probs=63.5
Q ss_pred CCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecc
Q 039250 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHV 137 (571)
Q Consensus 58 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~ 137 (571)
+..|..+.|++++||+|++ +|..+.++++|+++. +||.....+..+.||++++|.| .++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4566679999999999655 699888899998862 2666545556689999988877 689999999998
Q ss_pred cccccceeeEEEEe
Q 039250 138 SWLRGTVYGAIVVY 151 (571)
Q Consensus 138 ~~~~~Gl~G~liV~ 151 (571)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 75 999999984
No 76
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.11 E-value=1.7e-10 Score=102.02 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=71.5
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCC-CCCeeecCceEEEE--------Eecc-CCCCCCCCCCCCCCCCcceeEEeCCCcE
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTE-NHPIHLHGYNFYVV--------GYGT-GNYDPQTANFNLIDPPYMNTIGVPVGGW 518 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~-~HP~HlHG~~F~Vl--------~~~~-g~~~~~~~~~~~~~p~~rDTv~vpp~g~ 518 (571)
..+.++.|++|+|++.|.+. . .|.||+|+....+. ..+. ..+.+. -....++||..|.||+.
T Consensus 35 ~~i~v~~G~~V~~~~~N~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-----~~~~~~~~t~~l~pGet 106 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNSA---VQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-----DKSNIIAESPLANGNET 106 (139)
T ss_dssp SEEEECTTCEEEEEEECCCS---SCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-----CCTTEEEECCCBCTTCE
T ss_pred CeEEECCCCEEEEEEEeCCC---CCCeeEEEeccccccchhhhhhhhcccccccccCc-----ccccccccccccCCCCE
Confidence 45789999999999999653 5 89999998642110 0000 011100 01235789999999999
Q ss_pred EEEEEEecCceeeEEeeechhhhhcccEEEEEEe
Q 039250 519 AAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 519 ~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
..|.|.+++||.|.||||+..|.+ ||++.++|.
T Consensus 107 ~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 107 VEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999999 999999883
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.10 E-value=1.6e-10 Score=96.74 Aligned_cols=85 Identities=15% Similarity=0.163 Sum_probs=65.2
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEe-cC
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTA-DN 527 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~a-dn 527 (571)
+.+.++.|++|+|+ |.. ...|++|+||..|... + |. + .+....++..++||+...++|.+ +.
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~--~-g~-~--------~~~~~~~~~~i~pG~~~~~~f~~~~~ 81 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA--S-KE-L--------ADKLSHSQLMFSPGESYEITFSSDFP 81 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG--C-HH-H--------HHHHCEEEEECSTTCEEEEEECTTSC
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc--c-cc-c--------cccccccccccCCCCeEEEEEecCCC
Confidence 46789999999874 643 3789999999876321 0 00 0 00012578999999999999998 79
Q ss_pred ceeeEEeeechhhhhcccEEEEEEe
Q 039250 528 PGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 528 pG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
||.|.|||| .|...||++.+.|.
T Consensus 82 ~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 82 AGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CeeEEEEeC--CchhcCCEEEEEEc
Confidence 999999999 79999999999985
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.98 E-value=1.1e-09 Score=91.76 Aligned_cols=83 Identities=12% Similarity=0.092 Sum_probs=61.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCC----ccccCcCCCCCeEEEEEEeCCCCcceeEeecccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPA----YITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW 139 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~ 139 (571)
+.|++++||+|++ +|....++++|.|+...+. .+|.. ..+...+.||++++|.|+++.++|+||||||.|
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~H- 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEPH- 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTTT-
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCCh-
Confidence 8999999998755 5887678888888754421 12310 012345899999999998657899999999933
Q ss_pred cccceeeEEEEec
Q 039250 140 LRGTVYGAIVVYP 152 (571)
Q Consensus 140 ~~~Gl~G~liV~~ 152 (571)
..+||.|.|+|.+
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 3459999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.87 E-value=1.3e-08 Score=89.65 Aligned_cols=91 Identities=13% Similarity=0.152 Sum_probs=65.8
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCC-CeeEEecccccC-------------C-CCCC-CCCCc--cccCcCCCCCeEEEE
Q 039250 60 MFPGPVVYAQEDDRIIVKVTNQSPY-NATIHWHGVRQR-------------L-SCWF-DGPAY--ITQCPIQSGQTFTYE 121 (571)
Q Consensus 60 ~~pgP~i~v~~Gd~v~v~v~N~l~~-~~~iH~HG~~~~-------------~-~~~~-DG~~~--~~q~~i~PG~~~~y~ 121 (571)
+|-.+.|+|++||+|+++|+|.... +++++.++.... . ..+. ++.+. .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4544899999999999999999766 788888874210 0 0000 11110 112348999999999
Q ss_pred EEeCCCCcceeEeecccccccceeeEEEEe
Q 039250 122 FTMFQQKGTFFWHAHVSWLRGTVYGAIVVY 151 (571)
Q Consensus 122 ~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 151 (571)
|++ +++|+|+||||.++..+||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 998 79999999999865444999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.81 E-value=8.3e-09 Score=86.41 Aligned_cols=84 Identities=13% Similarity=0.202 Sum_probs=62.7
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCC-CcceeEEeCCCcEEEEEEEe-c
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDP-PYMNTIGVPVGGWAAIRFTA-D 526 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p-~~rDTv~vpp~g~~~irf~a-d 526 (571)
..+.++.|++|+|+ |.+ ...|+||+|+..+.. . .|. ..+ ..+|++.+.||+...+.|.+ +
T Consensus 20 ~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~--~g~----------~~~~~~~~~~~~~pG~~~~~~f~~~~ 81 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-K--SAD----------LAKSLSHKQLLMSPGQSTSTTFPADA 81 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-C--CHH----------HHHHHCBCSCCCSTTCEEEEECCTTC
T ss_pred CEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-c--ccc----------cchhccccceeeCCCCEEEEEEecCC
Confidence 45788999999986 543 368999999864310 0 000 000 11467789999999998888 7
Q ss_pred CceeeEEeeechhhhhcccEEEEEEe
Q 039250 527 NPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 527 npG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
.||.|.|||| .|.++||.+.+.|.
T Consensus 82 ~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 82 PAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCceEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999999 89999999999985
No 81
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.73 E-value=3.7e-08 Score=81.47 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=63.8
Q ss_pred ECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeec
Q 039250 57 VNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAH 136 (571)
Q Consensus 57 ~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H 136 (571)
-|..|-...|++++||+|++.++|.....+++...+.... ..+.||++.++.|+. .++|+|.|+|.
T Consensus 21 ~~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~ 86 (100)
T 4hci_A 21 NDDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICR 86 (100)
T ss_dssp ETTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECT
T ss_pred ECCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECc
Confidence 3556644799999999999999999777777666554321 347899999999998 89999999997
Q ss_pred ccccccceeeEEEEe
Q 039250 137 VSWLRGTVYGAIVVY 151 (571)
Q Consensus 137 ~~~~~~Gl~G~liV~ 151 (571)
.|.. .||.|.|+|+
T Consensus 87 ~H~~-~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLL-KGMEGKVIVK 100 (100)
T ss_dssp TTGG-GTCEEEEEEC
T ss_pred cccC-CCCEEEEEEC
Confidence 6533 4999999995
No 82
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.70 E-value=5.3e-08 Score=80.19 Aligned_cols=77 Identities=12% Similarity=0.194 Sum_probs=57.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCc----cccCcCCCCCeEEEEEEeCCCCcceeEeecccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAY----ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW 139 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~ 139 (571)
+.|++++||+|+ ++|....++++|+|+...+ +|... .+...+.||+++++.| .++|+|+|||+.|
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H- 86 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCEPH- 86 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGGG-
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEe---CCCeEEEEEcCCc-
Confidence 799999999865 5898778999999986432 22210 1124589999998876 4789999999954
Q ss_pred cccceeeEEEEe
Q 039250 140 LRGTVYGAIVVY 151 (571)
Q Consensus 140 ~~~Gl~G~liV~ 151 (571)
..+||.|.|+|+
T Consensus 87 ~~~gM~G~i~V~ 98 (98)
T 2plt_A 87 QGAGMVGKIIVQ 98 (98)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 335999999984
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.66 E-value=8e-08 Score=84.75 Aligned_cols=99 Identities=17% Similarity=0.178 Sum_probs=71.1
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCc--eEEEEE-ec--cC---CCCCCCCCCCCCCCCcceeEEeCCCcEEE
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGY--NFYVVG-YG--TG---NYDPQTANFNLIDPPYMNTIGVPVGGWAA 520 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~--~F~Vl~-~~--~g---~~~~~~~~~~~~~p~~rDTv~vpp~g~~~ 520 (571)
..+.++.|++|+|++.|... +.+.|.||++.. .|.-+. .+ .+ .|-+.. -....+++|..|.||....
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP----DTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SEEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT----TCTTEEEECCCBCTTEEEE
T ss_pred CeEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc----ccccccccceeeCCCceeE
Confidence 45789999999999999321 247999999842 121000 00 00 010000 0113478899999999999
Q ss_pred EEEEecCceeeEEeeechhhhhcccEEEEEEe
Q 039250 521 IRFTADNPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 521 irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 99999999999999999999999999999986
No 84
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.61 E-value=9.8e-08 Score=78.55 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=56.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccccccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT 143 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 143 (571)
+.|++++||+|++ .|....+++++.++...++.. .++.. .....+.||+++++.| .++|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 7899999998765 587667888888874322000 00000 1124589999998877 5789999999944 3359
Q ss_pred eeeEEEEe
Q 039250 144 VYGAIVVY 151 (571)
Q Consensus 144 l~G~liV~ 151 (571)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 85
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.58 E-value=1.8e-07 Score=82.46 Aligned_cols=92 Identities=10% Similarity=0.128 Sum_probs=64.4
Q ss_pred cCCCceEEEecCCEEEEEEEe--CCCCCeeEEecccc------------cCCC-CCC--CCCCc--cccCcCCCCCeEEE
Q 039250 60 MFPGPVVYAQEDDRIIVKVTN--QSPYNATIHWHGVR------------QRLS-CWF--DGPAY--ITQCPIQSGQTFTY 120 (571)
Q Consensus 60 ~~pgP~i~v~~Gd~v~v~v~N--~l~~~~~iH~HG~~------------~~~~-~~~--DG~~~--~~q~~i~PG~~~~y 120 (571)
+|-.+.|+|++||+|+++++| .....++++.+... .... .+. ++.+. .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 344479999999999999999 66677887777311 0000 000 01010 01135899999999
Q ss_pred EEEeCCCCcceeEeecccccc-cceeeEEEEec
Q 039250 121 EFTMFQQKGTFFWHAHVSWLR-GTVYGAIVVYP 152 (571)
Q Consensus 121 ~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 152 (571)
.|++ +.+|+|||||+..+.. .||.|.|+|.|
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 8899999999985443 59999999964
No 86
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.56 E-value=1.9e-07 Score=76.81 Aligned_cols=81 Identities=20% Similarity=0.236 Sum_probs=60.1
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+| .|.+ ...|.+|+|+..+ +.... ....++|+..+.||+...++| +.|
T Consensus 18 ~~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~-------------p~~~~-~~~~~~~~~~~~pG~~~~~tf--~~~ 76 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNA---GFPHNIVFDEDAI-------------PSGVN-ADAISRDDYLNAPGETYSVKL--TAA 76 (98)
T ss_dssp SEEEECTTCEEEE--EECS---SCCEEEEECGGGS-------------CTTCC-HHHHCEEEEECSTTCEEEEEC--CSC
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCC-------------CCccc-cccccccceecCCCCEEEEEe--CCC
Confidence 4578999999998 4543 3689999997532 00000 001247889999999888765 689
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.|||| .|.+.||.+.+.|.
T Consensus 77 G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 77 GEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEEEECG--GGGGGTCEEEEEEC
T ss_pred eEEEEEcC--CccccCCeEEEEEC
Confidence 99999999 79999999999873
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.55 E-value=2.5e-07 Score=76.10 Aligned_cols=79 Identities=16% Similarity=0.259 Sum_probs=59.4
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCc-ceeEEeCCCcEEEEEEEecC
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPY-MNTIGVPVGGWAAIRFTADN 527 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~-rDTv~vpp~g~~~irf~adn 527 (571)
..+.++.|++|.|+ |.+ ...|.+|+|+..+- +. ..+.+ +|+..+.||+...+.| +.
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~--------------~~~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD--------------TAAKLSHKGLLFAAGESFTSTF--TE 75 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH--------------HHHHHCEEEEECSTTCEEEEEC--CS
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc--------------ccccccccccccCCCCEEEEEc--CC
Confidence 45789999999987 532 36899999875321 00 00012 5788999999888766 89
Q ss_pred ceeeEEeeechhhhhcccEEEEEEe
Q 039250 528 PGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 528 pG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
||.|.|||| .|...||.+.+.|.
T Consensus 76 ~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 76 PGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999873
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.52 E-value=1.6e-07 Score=77.03 Aligned_cols=77 Identities=13% Similarity=0.200 Sum_probs=55.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCcc--ccCcCCCCCeEEEEEEeCCCCcceeEeecccccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYI--TQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLR 141 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~--~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~ 141 (571)
+.|++++||+| ++.|....+++++.++.... +|..+. ....+.||+++++.| .++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 79999999985 55687666777777764321 221111 124588999988876 6899999999944 33
Q ss_pred cceeeEEEEe
Q 039250 142 GTVYGAIVVY 151 (571)
Q Consensus 142 ~Gl~G~liV~ 151 (571)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 4999999984
No 89
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.51 E-value=2.6e-07 Score=74.76 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=55.2
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeeccccccc
Q 039250 63 GPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRG 142 (571)
Q Consensus 63 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~ 142 (571)
.+.|++++||+|++ .|....+++++.++.. .+ + .....+.||+++++.| .++|+|||||+.|. .+
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~--~---~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~-~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----EL--S---HKDLAFSPGETFEATF---SEPGTYTYYCEPHR-GA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG----GG--C---EEEEECSTTCEEEEEC---CSCEEEEEECTTTG-GG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC----cc--C---cccceeCCCCEEEEEe---CCCEEEEEEeCCCc-cC
Confidence 37999999999765 5876678899888721 00 0 1124688999888866 67999999999553 34
Q ss_pred ceeeEEEEe
Q 039250 143 TVYGAIVVY 151 (571)
Q Consensus 143 Gl~G~liV~ 151 (571)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 90
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.50 E-value=2.5e-07 Score=76.68 Aligned_cols=74 Identities=12% Similarity=0.150 Sum_probs=54.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCC----------Ccc--ccCcCCCCCeEEEEEEeCCCCcce
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGP----------AYI--TQCPIQSGQTFTYEFTMFQQKGTF 131 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~----------~~~--~q~~i~PG~~~~y~~~~~~~~Gt~ 131 (571)
+.|++++||+|+ +.|....+++++.+. + +|. +++ ....+.||+++++.| .++|+|
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y 83 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDI----P----AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTY 83 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECC----C----TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEE
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeC----c----ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEE
Confidence 899999999976 568866677777762 1 221 111 224589999988876 679999
Q ss_pred eEeecccccccceeeEEEEe
Q 039250 132 FWHAHVSWLRGTVYGAIVVY 151 (571)
Q Consensus 132 wYH~H~~~~~~Gl~G~liV~ 151 (571)
+|||+.| ..+||.|.|+|+
T Consensus 84 ~y~C~~H-~~~gM~G~i~V~ 102 (102)
T 1kdj_A 84 TFYCTPH-KSANMKGTLTVK 102 (102)
T ss_dssp EEECSTT-GGGTCEEEEEEC
T ss_pred EEEeCCC-cccCCeEEEEEC
Confidence 9999943 345999999984
No 91
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.49 E-value=4.2e-07 Score=74.83 Aligned_cols=77 Identities=12% Similarity=0.184 Sum_probs=56.0
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCc------cccCcCCCCCeEEEEEEeCCCCcceeEeecc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAY------ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHV 137 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~ 137 (571)
+.|++++||+| +++|....+++++.++...+ +|... .....+.||+++++.| .++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 68999999985 55888777888888874321 33210 1123578999988876 479999999994
Q ss_pred cccccceeeEEEEe
Q 039250 138 SWLRGTVYGAIVVY 151 (571)
Q Consensus 138 ~~~~~Gl~G~liV~ 151 (571)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 4 335999999984
No 92
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.48 E-value=4.3e-07 Score=74.84 Aligned_cols=77 Identities=14% Similarity=0.217 Sum_probs=55.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCc------cccCcCCCCCeEEEEEEeCCCCcceeEeecc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAY------ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHV 137 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~ 137 (571)
+.|++++||+|+ ++|....+++++.++...+ +|... .....+.||+++++.| .++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 799999999765 5888767788877764321 22210 1123578999988876 489999999994
Q ss_pred cccccceeeEEEEe
Q 039250 138 SWLRGTVYGAIVVY 151 (571)
Q Consensus 138 ~~~~~Gl~G~liV~ 151 (571)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 4 335999999984
No 93
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.46 E-value=4.9e-07 Score=77.30 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=52.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccccccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT 143 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 143 (571)
..|+|++||+|++.+.|. + |++......+-+|.. ...+.||++++|.| +.+|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H~-~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPHF-GMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGGT-TTT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 799999999977776662 3 444332111114431 23467999888877 57899999998553 359
Q ss_pred eeeEEEEecC
Q 039250 144 VYGAIVVYPK 153 (571)
Q Consensus 144 l~G~liV~~~ 153 (571)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 94
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.45 E-value=5.8e-07 Score=72.68 Aligned_cols=73 Identities=19% Similarity=0.332 Sum_probs=57.4
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|.|+ |.+ ...|.+|+|+.. +...++..+.||+...+.| +.|
T Consensus 19 ~~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~----------------------~~~~~~~~~~~g~~~~~~f--~~~ 69 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNK---LAPHNVVVEGQP----------------------ELSHKDLAFSPGETFEATF--SEP 69 (91)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEETTCG----------------------GGCEEEEECSTTCEEEEEC--CSC
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCC----------------------ccCcccceeCCCCEEEEEe--CCC
Confidence 45788999999986 432 268999988721 0125778899998877765 899
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.|||| .|...||.+.+.|.
T Consensus 70 G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 70 GTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEEeC--CCccCCCEEEEEEC
Confidence 99999999 89999999999873
No 95
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.43 E-value=4.1e-07 Score=78.20 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=52.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccccccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT 143 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 143 (571)
+.|+|++||+|++.+.|. + |++......+-||.. ...+.||++++|.| +.+|+|||||..|. .+|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H~-~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPHV-GMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 899999999976655542 3 444432111113321 24467999988777 67899999998653 459
Q ss_pred eeeEEEEecCC
Q 039250 144 VYGAIVVYPKT 154 (571)
Q Consensus 144 l~G~liV~~~~ 154 (571)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999998754
No 96
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.38 E-value=5e-07 Score=74.07 Aligned_cols=79 Identities=14% Similarity=0.309 Sum_probs=58.5
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|+ |.+ ...|.+++++..+ ..+ . ....+++..+.||+...+.| +.|
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~--------~---~~~~~~~~~~~~g~~~~~tf--~~~ 75 (97)
T 1b3i_A 19 KALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GES--------A---PALSNTKLAIAPGSFYSVTL--GTP 75 (97)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSC--------H---HHHCBCCCCCSCSCCEEEEC--CSC
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----ccc--------c---ccccccceecCCCCEEEEEe--CCC
Confidence 35688999999887 533 3689999987654 000 0 00114667788998877765 899
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.|||+ .|.++||.+.+.|.
T Consensus 76 G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 76 GTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp SEEEEECS--STTTTTCEEEEEEC
T ss_pred eEEEEEcc--ChhhcCCEEEEEEC
Confidence 99999999 89999999999873
No 97
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.36 E-value=4e-07 Score=75.01 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=58.9
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+| .|.+ ...|.+|+++..|- .+ ++. . .....+|++.+.||+...+.| +.|
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~g---~~~----~--~~~~~~~~~~~~~G~~~~~~f--~~~ 77 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---AG---VDV----T--KISMPEEDLLNAPGEEYSVTL--TEK 77 (99)
T ss_dssp SEEEECTTEEEEE--EECS---SCCBCCEECTTSSC---TT---CCH----H--HHSCCTTCCBCSTTCEEEEEE--CSC
T ss_pred CEEEECCCCEEEE--EECC---CCcceEEEeCCCCc---cc---ccc----c--cccccccceeeCCCCEEEEEe--CCC
Confidence 4568899999988 4543 36899999986430 00 000 0 001125667889998877765 699
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.|||+ .|.++||.+.+.|.
T Consensus 78 G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 78 GTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEEEEECG--GGTTTTCEEEEEEC
T ss_pred cEEEEEcC--CccccCCEEEEEEC
Confidence 99999999 79999999999873
No 98
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.35 E-value=8.2e-07 Score=75.83 Aligned_cols=75 Identities=8% Similarity=0.009 Sum_probs=52.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccccccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT 143 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 143 (571)
..|+|++||+|+ ++|.. .++++..+.... -+|.. ...+.||++++|.| +.+|+|+|||-.|. .+|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~~-----p~g~~---~~~~~pg~t~s~TF---~~~G~y~Y~C~~H~-~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREVW-----PEGVA---PVKGGFSKEVVFNA---EKEGLYVLKCAPHY-GMG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTTS-----CTTSC---CCBCCTTCCEEEEC---CSSEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCcC-----CCCcc---ccccCCCCEEEEEe---CCCeEEEEEcCCCC-cCC
Confidence 799999999965 45553 455555542211 13321 24567999988877 57899999997543 349
Q ss_pred eeeEEEEecC
Q 039250 144 VYGAIVVYPK 153 (571)
Q Consensus 144 l~G~liV~~~ 153 (571)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 99
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.34 E-value=2.4e-06 Score=74.28 Aligned_cols=79 Identities=11% Similarity=0.172 Sum_probs=57.3
Q ss_pred CCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecc
Q 039250 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHV 137 (571)
Q Consensus 58 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~ 137 (571)
+..|-.+.|++++||+|++ +|....++++++.... +|........+.||++++|.| .++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455448999999999765 5887767777664321 222222234588999998887 578999999987
Q ss_pred cccccceeeEEEEe
Q 039250 138 SWLRGTVYGAIVVY 151 (571)
Q Consensus 138 ~~~~~Gl~G~liV~ 151 (571)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 64 999999984
No 100
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.32 E-value=2.8e-06 Score=71.58 Aligned_cols=74 Identities=20% Similarity=0.338 Sum_probs=57.7
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|+.|+|++.|... ..|-|++... .-+..++||+...+.|.++.|
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~---~~H~~~i~~~--------------------------~~~~~i~pG~~~~~~f~~~~~ 88 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSP---ISEGFSIDAF--------------------------GVQEVIKAGETKTISFTADKA 88 (112)
T ss_dssp CEEEEETTCEEEEEEEECSS---SCEEEEEGGG--------------------------TEEEEECTTCEEEEEEECCSC
T ss_pred CEEEEeCCCEEEEEEEECCC---CeEEEEEcCC--------------------------CceeEeCCCCEEEEEEECCCC
Confidence 46789999999999999642 3444333321 125679999999999999999
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.||||+.-|... |.+.++|.
T Consensus 89 G~y~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 89 GAFTIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEEEEBCSSSCTTTB-CCEEEEEE
T ss_pred EEEEEECCCCCchHH-CEEEEEEe
Confidence 999999999887554 99999886
No 101
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.25 E-value=3.6e-06 Score=69.33 Aligned_cols=73 Identities=16% Similarity=0.327 Sum_probs=58.5
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|+++.|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~--------------------------~~~~~pg~~~~~~~t~~~~ 78 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKG---KSEHTFTIKKLGI--------------------------DVVVESGKEKNITVKPKSA 78 (100)
T ss_dssp SEEEECTTSCEEEEEEECS---SSCEEEEEGGGTE--------------------------EEEECTTCEEEEEECCCSC
T ss_pred CEEEECCCCEEEEEEEcCC---CceEEEEEecCCc--------------------------ceeecCCcceeEEEecccC
Confidence 4578999999999999964 2556665544322 2457788999999999999
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.|+|. .|...||.+.+.|+
T Consensus 79 G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 79 GTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEEEEECT--TTGGGTCEEEEEEC
T ss_pred ceEEEECc--cccCCCCEEEEEEC
Confidence 99999996 59999999999884
No 102
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.24 E-value=2.8e-06 Score=73.19 Aligned_cols=93 Identities=6% Similarity=0.034 Sum_probs=60.8
Q ss_pred cCCCceEEEecC-CEEEEEEEeCCCCC-----ee--EEeccccc-------------CCCCCCCCCCccccCcCCCCCeE
Q 039250 60 MFPGPVVYAQED-DRIIVKVTNQSPYN-----AT--IHWHGVRQ-------------RLSCWFDGPAYITQCPIQSGQTF 118 (571)
Q Consensus 60 ~~pgP~i~v~~G-d~v~v~v~N~l~~~-----~~--iH~HG~~~-------------~~~~~~DG~~~~~q~~i~PG~~~ 118 (571)
+|--..|.|++| |+|+|+|+|....+ ++ |--+|... ......|..-......|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343368999999 99999999985432 33 33333110 00000011000011357999999
Q ss_pred EEEEEeC--CCCcceeEeecccccccceeeEEEEec
Q 039250 119 TYEFTMF--QQKGTFFWHAHVSWLRGTVYGAIVVYP 152 (571)
Q Consensus 119 ~y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 152 (571)
++.|+++ .++|+|||.|-..+.++||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9999983 289999999987766669999999963
No 103
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.22 E-value=4.8e-06 Score=68.31 Aligned_cols=77 Identities=12% Similarity=0.062 Sum_probs=54.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCc----cccCcCCCCCeEEEEEEeCCCCcceeEeecccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAY----ITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSW 139 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~----~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~ 139 (571)
+.|++++||+|++ .|....++++....-..+ +|.-. .....+.||+++++.| .++|+|+|+|..|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~p-----~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAVP-----AGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSSC-----TTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCCc-----cccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 7999999998654 588667777776642111 33210 0113588999888876 68999999998753
Q ss_pred cccceeeEEEEe
Q 039250 140 LRGTVYGAIVVY 151 (571)
Q Consensus 140 ~~~Gl~G~liV~ 151 (571)
. +||.|.|+|+
T Consensus 88 ~-~gM~G~I~V~ 98 (98)
T 1iuz_A 88 G-AGMKMTITVQ 98 (98)
T ss_dssp G-GTCEEEEEEC
T ss_pred c-CCCEEEEEEC
Confidence 3 4999999984
No 104
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.20 E-value=1.7e-06 Score=71.51 Aligned_cols=85 Identities=16% Similarity=0.100 Sum_probs=57.7
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCc-ceeEEeCCCcEEEEEEEecC
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPY-MNTIGVPVGGWAAIRFTADN 527 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~-rDTv~vpp~g~~~irf~adn 527 (571)
..+.++.|++|+|+ |.+ ...|.++++.-.. ++....... ..+.+ .+++.+.||+...+.| +.
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~pG~~~~~tf--~~ 79 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIPAG---------APGTVASEL-KAASMDENDLLSEDEPSFKAKV--ST 79 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCCTT---------CCHHHHHHH-HHTSCCTTCCBBTTBCEEEECC--CS
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCccc---------ccccccchh-hcccccccceecCCCCEEEEEe--CC
Confidence 45789999999986 543 3689999873110 000000000 01122 4667788998877766 89
Q ss_pred ceeeEEeeechhhhhcccEEEEEEe
Q 039250 528 PGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 528 pG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
||.|.|||+ .|.++||.+.+.|.
T Consensus 80 ~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 80 PGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CeEEEEEeC--CCcccCCeEEEEEC
Confidence 999999999 99999999999883
No 105
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.18 E-value=9e-06 Score=72.99 Aligned_cols=92 Identities=8% Similarity=0.053 Sum_probs=60.9
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ee--EEeccccc---------CCCCC---CCCCCccccCcCCCCCeEE
Q 039250 60 MFPGPVVYA-QEDDRIIVKVTNQSPYN-----AT--IHWHGVRQ---------RLSCW---FDGPAYITQCPIQSGQTFT 119 (571)
Q Consensus 60 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~~--iH~HG~~~---------~~~~~---~DG~~~~~q~~i~PG~~~~ 119 (571)
+|--..|.| ++||+|+|+|+|....+ ++ |--+|... ....+ .|..-......|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 554368999 99999999999995442 33 32233110 00000 0110000123589999999
Q ss_pred EEEEeCC--CCcceeEeecccccccceeeEEEEec
Q 039250 120 YEFTMFQ--QKGTFFWHAHVSWLRGTVYGAIVVYP 152 (571)
Q Consensus 120 y~~~~~~--~~Gt~wYH~H~~~~~~Gl~G~liV~~ 152 (571)
+.|++ + ++|+|||+|-..+...||.|.|+|.+
T Consensus 134 vtf~~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDP-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECG-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEec-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 99988 5 89999999987766669999999963
No 106
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.17 E-value=6e-06 Score=70.65 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=49.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccccccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT 143 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 143 (571)
+.|+|++||+|++ +|... + |.+.......-||... ....||++++|.| +.+|+|+|+|..|.. +|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~-----H~v~~~~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-G-----HNVESIKDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHYA-MG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-S-----CCCEECTTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEE--EECCC-C-----eEEEEecccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCccc-CC
Confidence 7999999999754 55532 3 4443321111133211 3356999877766 579999999975433 59
Q ss_pred eeeEEEEecC
Q 039250 144 VYGAIVVYPK 153 (571)
Q Consensus 144 l~G~liV~~~ 153 (571)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 107
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.12 E-value=6e-06 Score=70.62 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=50.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccccccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT 143 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 143 (571)
+.|+|++||+|+ ++|... + |.+......+-||.. ...+.||+++++.| +.+|+|+|+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~-----H~v~~~~~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-G-----HNVETIKGMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPHY-MMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-S-----CCCEECTTSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTTT-TTT
T ss_pred CEEEECCCCEEE--EEECCC-C-----cEEEEecccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCcc-ccC
Confidence 799999999955 556533 4 443332111113321 13467999887776 57999999998543 359
Q ss_pred eeeEEEEecC
Q 039250 144 VYGAIVVYPK 153 (571)
Q Consensus 144 l~G~liV~~~ 153 (571)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 108
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.11 E-value=1.7e-05 Score=66.06 Aligned_cols=79 Identities=11% Similarity=0.172 Sum_probs=54.2
Q ss_pred CCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecc
Q 039250 58 NNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHV 137 (571)
Q Consensus 58 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~ 137 (571)
+..|-...|++++||+|++ .|....++++...... .|........+.||+++++.| .++|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3455447999999999765 5886555555544321 111111123478999988877 578999999988
Q ss_pred cccccceeeEEEEe
Q 039250 138 SWLRGTVYGAIVVY 151 (571)
Q Consensus 138 ~~~~~Gl~G~liV~ 151 (571)
|. ||.|.|+|+
T Consensus 96 H~---~M~G~I~V~ 106 (106)
T 1id2_A 96 HP---FMRGKVIVE 106 (106)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 64 999999984
No 109
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.08 E-value=4.6e-06 Score=68.56 Aligned_cols=83 Identities=17% Similarity=0.152 Sum_probs=57.5
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+| .|.+ ...|.++++...+- .+ .+ .. .....++.+.+.||+...+.| +.|
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~~---~~----~~--~~~~~~~~~~~~~G~~~~~tf--~~~ 77 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---SG---VD----AS--KISMSEEDLLNAKGETFEVAL--SNK 77 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC---TT---CC----HH--HHCCCTTCCBCSTTCEEEEEC--CSC
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc---cc---cc----cc--ccccccCccccCCCCEEEEEE--CCC
Confidence 4678999999988 4543 36899999875330 00 00 00 000124556788998877755 699
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.|||+ .|..+||.+.+.|.
T Consensus 78 G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 78 GEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EEEEEECG--GGTTTTCEEEEEEC
T ss_pred ceEEEEcC--CCcccCCEEEEEEC
Confidence 99999999 79999999999873
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.06 E-value=2.8e-05 Score=66.91 Aligned_cols=91 Identities=8% Similarity=0.070 Sum_probs=59.3
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ee--EEeccccc-------------CCCCCCCCCCccccCcCCCCCeE
Q 039250 60 MFPGPVVYA-QEDDRIIVKVTNQSPYN-----AT--IHWHGVRQ-------------RLSCWFDGPAYITQCPIQSGQTF 118 (571)
Q Consensus 60 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~~--iH~HG~~~-------------~~~~~~DG~~~~~q~~i~PG~~~ 118 (571)
+|--..|.| ++||+|+|+|+|....+ ++ |--+|... ......|..-......|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 443368999 99999999999995442 33 32333110 00000011000011357999999
Q ss_pred EEEEEeCC--CCcc-eeEeecccccccceeeEEEEe
Q 039250 119 TYEFTMFQ--QKGT-FFWHAHVSWLRGTVYGAIVVY 151 (571)
Q Consensus 119 ~y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 151 (571)
+..|++ + .+|+ |||.|-..+..+||.|.|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~ 128 (129)
T 2ccw_A 94 SVTFDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLG 128 (129)
T ss_dssp EEEEEG-GGSCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEeCCCChhHcCEEEEEEe
Confidence 999998 5 6665 999998777767999999995
No 111
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.05 E-value=2.7e-05 Score=66.93 Aligned_cols=91 Identities=10% Similarity=0.110 Sum_probs=60.1
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----eeEEe--ccc---------cc----CCCCCCCCCCccccCcCCCCCeE
Q 039250 60 MFPGPVVYA-QEDDRIIVKVTNQSPYN-----ATIHW--HGV---------RQ----RLSCWFDGPAYITQCPIQSGQTF 118 (571)
Q Consensus 60 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~~iH~--HG~---------~~----~~~~~~DG~~~~~q~~i~PG~~~ 118 (571)
+|--..|.| +.|++|+|+|+|....+ +++-+ .+. .. ......|..-......|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 444368999 99999999999995443 44322 110 00 00000011100011347999999
Q ss_pred EEEEEeCC--CCcc-eeEeecccccccceeeEEEEe
Q 039250 119 TYEFTMFQ--QKGT-FFWHAHVSWLRGTVYGAIVVY 151 (571)
Q Consensus 119 ~y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 151 (571)
++.|++ . ++|+ |+|.|-..+..+||.|.|+|.
T Consensus 93 ~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 127 (128)
T 2iaa_C 93 SVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELG 127 (128)
T ss_dssp EEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEe
Confidence 999998 5 7885 999998877777999999995
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.04 E-value=3e-05 Score=66.60 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=59.4
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----eeEEe--ccccc-------CCCCCCC----CCC-cc-ccCcCCCCCeE
Q 039250 60 MFPGPVVYA-QEDDRIIVKVTNQSPYN-----ATIHW--HGVRQ-------RLSCWFD----GPA-YI-TQCPIQSGQTF 118 (571)
Q Consensus 60 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~~iH~--HG~~~-------~~~~~~D----G~~-~~-~q~~i~PG~~~ 118 (571)
+|--..|.| ++||+|+|+|+|....+ +++-. .|... ....-+| +-+ .+ ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 444368999 99999999999995442 44332 22110 0000001 001 01 11248999999
Q ss_pred EEEEEeCC--CCcc-eeEeecccccccceeeEEEEe
Q 039250 119 TYEFTMFQ--QKGT-FFWHAHVSWLRGTVYGAIVVY 151 (571)
Q Consensus 119 ~y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 151 (571)
++.|++ . .+|+ |||.|-..+..+||.|.|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999998 5 6777 999998777666999999984
No 113
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.97 E-value=2.2e-05 Score=66.98 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=49.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecccccccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGT 143 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 143 (571)
+.|+|++||+|++ +|... .++++... ..+-+|.. ...+.||++++|.| +++|+|+|+|..|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 7999999998654 56643 44444332 11113321 13457999988877 578999999988644
Q ss_pred eeeEEEEecC
Q 039250 144 VYGAIVVYPK 153 (571)
Q Consensus 144 l~G~liV~~~ 153 (571)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999864
No 114
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.89 E-value=6e-05 Score=67.12 Aligned_cols=84 Identities=15% Similarity=0.241 Sum_probs=60.8
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCccee-------EEeCCCc--EE
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNT-------IGVPVGG--WA 519 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDT-------v~vpp~g--~~ 519 (571)
+.+.++.|++|.+++.|.+ ....|-|-++.. +. .+.. .|.-.+. ..|.||+ ..
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~~-~~~~--------~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------GP-PYAV--------MPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------CS-CCCS--------SCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------Cc-chhc--------cccccccccccccccccCCCCceEE
Confidence 5689999999999999963 135676666532 10 1110 0111111 2567898 99
Q ss_pred EEEEEecCceeeEEeeechhhhhcccEEEEEE
Q 039250 520 AIRFTADNPGVWFMHCHFDIHQSWGLGTVLIV 551 (571)
Q Consensus 520 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~V 551 (571)
.+.|++ .||.+.||||+--|...||-+.+.|
T Consensus 123 t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 123 DFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 999999 9999999999999999999999987
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.82 E-value=6.9e-05 Score=80.61 Aligned_cols=78 Identities=18% Similarity=0.393 Sum_probs=62.8
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
+.+.++.|+.|+|++.|.....+..|.|+++++.+. ..+.||....+.|+++.|
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~--------------------------~~i~PG~t~t~~Fta~~p 566 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA--------------------------MEIGPQMTSSVTFVAANP 566 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE--------------------------EEECTTCEEEEEEECCSC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc--------------------------eeeCCCCeEEEEEECCCC
Confidence 567899999999999995321235788888875431 468889999999999999
Q ss_pred eeeEEeee---chhhhhcccEEEEEEeCC
Q 039250 529 GVWFMHCH---FDIHQSWGLGTVLIVKNG 554 (571)
Q Consensus 529 G~w~~HCH---il~H~d~GM~~~~~V~~~ 554 (571)
|.|.|||| ...|. ||.+.+.|.+.
T Consensus 567 GtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred EEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 99999999 35675 99999999753
No 116
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.81 E-value=9e-05 Score=78.13 Aligned_cols=85 Identities=18% Similarity=0.215 Sum_probs=62.6
Q ss_pred EEECCcCCCceEEEecCCEEEEEEEeCC---CCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcce
Q 039250 55 VTVNNMFPGPVVYAQEDDRIIVKVTNQS---PYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTF 131 (571)
Q Consensus 55 ~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~ 131 (571)
...+-.+-.+.|+|++||+|++.++|.. +..+++...++ |+ ..-+.||++.++.|++ +++|+|
T Consensus 549 ta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GI----K~DaiPGrtnsvtFta-dkPGvY 614 (638)
T 3sbq_A 549 TSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GV----SMEISPQQTSSITFVA-DKPGLH 614 (638)
T ss_dssp EEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE----EEEECTTCEEEEEEEC-CSCEEE
T ss_pred EEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cc----eeeeCCCCeEEEEEEc-CCCEEE
Confidence 3455566668999999999999999973 33333333221 11 1358899999999999 999999
Q ss_pred eEeecccc--cccceeeEEEEecC
Q 039250 132 FWHAHVSW--LRGTVYGAIVVYPK 153 (571)
Q Consensus 132 wYH~H~~~--~~~Gl~G~liV~~~ 153 (571)
||+|.... ...+|.|.++|+|+
T Consensus 615 ~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 615 WYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEECCCcCCCCcccceEEEEEecC
Confidence 99998632 23489999999864
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.78 E-value=6.7e-05 Score=62.25 Aligned_cols=72 Identities=17% Similarity=0.231 Sum_probs=50.1
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|+ |.. ...|.+|+|... .|. +.+ +.-.+.||+...+.| +.|
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~------------~~~-~~~~~~pG~~~~~tf--~~~ 85 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE------------AAL-KGPMMKKEQAYSLTF--TEA 85 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS------------SCE-ECCCBCTTEEEEEEE--CSC
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc------------ccc-cccccCCCCEEEEEe--CCC
Confidence 46789999999985 543 368999988521 010 001 112367887666554 899
Q ss_pred eeeEEeeechhhhhcccEEEEEE
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIV 551 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V 551 (571)
|.+.|||++ |. ||.+.+.|
T Consensus 86 G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 86 GTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEEEEECSS--CT--TCEEEEEE
T ss_pred EEEEEEeCC--CC--CCEEEEEE
Confidence 999999998 65 99999987
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.25 E-value=0.0021 Score=54.37 Aligned_cols=89 Identities=11% Similarity=0.199 Sum_probs=54.7
Q ss_pred cCCCceEEEec-CCEEEEEEEeCCCCC-----ee--EEec---------ccccCCC-CCC---CCCCccccCcCCCCCeE
Q 039250 60 MFPGPVVYAQE-DDRIIVKVTNQSPYN-----AT--IHWH---------GVRQRLS-CWF---DGPAYITQCPIQSGQTF 118 (571)
Q Consensus 60 ~~pgP~i~v~~-Gd~v~v~v~N~l~~~-----~~--iH~H---------G~~~~~~-~~~---DG~~~~~q~~i~PG~~~ 118 (571)
+|--..|.|++ |++|+|+|+|....+ ++ |--. |+..-+. .++ |-.--.....|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 45447999986 999999999995432 33 3211 1111100 110 11100111248999999
Q ss_pred EEEEEeC--CCCcceeEeecccccccceeeEEEEe
Q 039250 119 TYEFTMF--QQKGTFFWHAHVSWLRGTVYGAIVVY 151 (571)
Q Consensus 119 ~y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 151 (571)
+..|+.+ .++|+|.|.|. +.+ ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 9999984 28999999999 334 999999984
No 119
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.19 E-value=0.00066 Score=57.73 Aligned_cols=76 Identities=14% Similarity=0.204 Sum_probs=51.8
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|+..+ ..|-+..+.. .+.. -.+.+.+.+|....+ +++.|
T Consensus 22 ~~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~-----------g~~~~~~~pg~t~s~--TF~~~ 72 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPE-----------GVAPVKGGFSKEVVF--NAEKE 72 (124)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------TSCT-----------TSCCCBCCTTCCEEE--ECCSS
T ss_pred CEEEECCCCEEEEEECC------CCccEEEeCC----------cCCC-----------CccccccCCCCEEEE--EeCCC
Confidence 45789999999998653 4677666521 1100 001123456765554 45899
Q ss_pred eeeEEeeechhhhhcccEEEEEEeCCC
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVKNGK 555 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~~~~ 555 (571)
|.|.|||- .|...||.+.+.|.++.
T Consensus 73 G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 73 GLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred eEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 99999995 89999999999998753
No 120
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.18 E-value=0.00054 Score=58.61 Aligned_cols=76 Identities=18% Similarity=0.219 Sum_probs=50.8
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|++.| ..|-+..+... .. . -...+.+.||+.. .++++.|
T Consensus 23 ~~i~V~~GDtVtf~n~~------~~H~v~~~~~~----------~P---~--------g~~~f~s~pGet~--s~TF~~p 73 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKD------KGHNSALMKGG----------AP---E--------GAETWKGKINEEI--TVTLSKP 73 (127)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTTC----------SC---T--------TCCCCBCCTTCCC--EEECCSC
T ss_pred CEEEECCCCEEEEEECC------CCceEEEccCc----------CC---C--------CccceecCCCCEE--EEEeCCC
Confidence 46789999999998765 24555543210 00 0 0001122466654 4555899
Q ss_pred eeeEEeeechhhhhcccEEEEEEeCCC
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVKNGK 555 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~~~~ 555 (571)
|.|.|||- .|...||.+.+.|.++.
T Consensus 74 G~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 74 GVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred eEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 99999999 69999999999998754
No 121
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.14 E-value=0.00085 Score=57.07 Aligned_cols=75 Identities=13% Similarity=0.227 Sum_probs=51.0
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|++.| ..|-+..+.. .. +... +.+.+.||+...+.| +.|
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~---P~g~--------~~f~~~pg~t~s~TF--~~p 71 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD------KSHNVEAIKE----------IL---PEGV--------ESFKSKINESYTLTV--TEP 71 (123)
T ss_dssp SEEEECTTEEEEEEESS------TTCCCEECTT----------SS---CTTC--------CCCBCCTTCCEEEEE--CSC
T ss_pred CEEEECCCCEEEEEECC------CCceEEEcCC----------cC---CCCc--------cceecCCCCEEEEEe--CCC
Confidence 45789999999998876 2466555421 00 0000 011234676555554 899
Q ss_pred eeeEEeeechhhhhcccEEEEEEeCC
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVKNG 554 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~~~ 554 (571)
|.|.|+|- .|...||.+.+.|.++
T Consensus 72 G~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 72 GLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp EEEEEECG--GGTTTTCEEEEEESSS
T ss_pred eEEEEEeC--CCCcCCcEEEEEECCC
Confidence 99999999 8999999999999863
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.06 E-value=0.002 Score=52.42 Aligned_cols=81 Identities=17% Similarity=0.248 Sum_probs=53.8
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|+ |.+ ...|-+.+.... + +..++. ...-.+...+.||....+.| +.|
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~----------~---p~g~~~-~~~~~~~~~~~~g~~~~~tf--~~~ 76 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDEDA----------V---PAGVDA-DAISYDDYLNSKGETVVRKL--STP 76 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTTS----------S---CTTCCH-HHHCEEEEECSTTCEEEEEC--CSC
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCCC----------C---cccccc-ccccccccccCCCCEEEEEc--CCC
Confidence 46789999999986 432 256766554311 0 000000 00113446788998777765 899
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.|+|-+ |..+||-+.+.|.
T Consensus 77 G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 77 GVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEEEchh--hccCCCEEEEEEC
Confidence 999999986 9999999999873
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.93 E-value=0.0027 Score=52.45 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=48.8
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|+ |.. ...|.+++.... .|. ...++-.+.+|....+.| +.|
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~-------~~~-------------~~~~s~~l~~g~~~~~tf--~~~ 86 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE-------------DAFRGEMMTKDQAYAITF--NEA 86 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS-------------SCEECCCBCTTEEEEEEE--CSC
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCC-------CCc-------------ccccccccCCCCEEEEEe--CCC
Confidence 46789999999987 543 256776654321 000 011223467887766665 899
Q ss_pred eeeEEeeechhhhhcccEEEEEE
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIV 551 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V 551 (571)
|.|.|+|-+ |. ||.+.+.|
T Consensus 87 G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 87 GSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEEEEECSS--CT--TCEEEEEE
T ss_pred EEEEEEeCC--CC--CCEEEEEE
Confidence 999999987 76 99999987
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.77 E-value=0.0039 Score=53.76 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=49.8
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|+|+ |.. ...|-+++.... .|. . ..++-.+.||+...+.| +.|
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~------------~-~~~s~~l~pG~t~~~tF--~~~ 112 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE------------D-AFRGEMMTKDQAYAITF--NEA 112 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS------------S-CEECCCBCTTEEEEEEE--CSC
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc------------c-cccccccCCCCEEEEEc--CCC
Confidence 46789999999987 543 257877764321 000 0 11233467888777665 899
Q ss_pred eeeEEeeechhhhhcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|.|.|||-+ |. ||-+.+.|+
T Consensus 113 G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 113 GSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEEEEECSS--CT--TCEEEEEEC
T ss_pred EEEEEEeCC--Cc--CCEEEEEEC
Confidence 999999987 76 999999873
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.35 E-value=0.02 Score=49.40 Aligned_cols=74 Identities=18% Similarity=0.268 Sum_probs=53.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeeccc--ccc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVS--WLR 141 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~--~~~ 141 (571)
..|.++.|++|++.++|.. .. |+..++. .|. ..-+.||+.-++.|++ +++|+|+|+|... ..-
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~----~~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEG----TNI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETT----SSC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecC----CCc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 5899999999999999972 33 4444332 121 1346799988899998 9999999999541 122
Q ss_pred cceeeEEEEec
Q 039250 142 GTVYGAIVVYP 152 (571)
Q Consensus 142 ~Gl~G~liV~~ 152 (571)
++|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 48889988853
No 126
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.34 E-value=0.0071 Score=51.35 Aligned_cols=75 Identities=17% Similarity=0.300 Sum_probs=48.7
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|.|+..+ ..|-+.++- + .. + .. .+ .+.+.+|.. ..++++.|
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~--------~--~~-p--~~---~~-----~~~~~pG~t--~~~tF~~~ 71 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVD------KGHNVESIK--------D--MI-P--EG---AE-----KFKSKINEN--YVLTVTQP 71 (123)
T ss_dssp SEEEECTTCEEEEEESS------SSCCCEECT--------T--CS-C--TT---CC-----CCBCCTTCC--EEEECCSC
T ss_pred CEEEECCCCEEEEEECC------CCeEEEEec--------c--cC-C--CC---cc-----ceecCCCCE--EEEEeCCC
Confidence 45788999999987654 245555431 0 00 0 00 00 012346664 44556899
Q ss_pred eeeEEeeechhhhhcccEEEEEEeCC
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVKNG 554 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~~~ 554 (571)
|.|.|+|- .|...||-+.+.|.++
T Consensus 72 G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 72 GAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp EEEEEECT--TTGGGTCEEEEEESSS
T ss_pred EEEEEEeC--CcccCCCEEEEEEcCC
Confidence 99999997 5999999999999863
No 127
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.20 E-value=0.0072 Score=51.31 Aligned_cols=75 Identities=21% Similarity=0.349 Sum_probs=48.6
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|.|+..+ ..|-+.++- + .. + .. . ..+.+.+|.... ++++.|
T Consensus 21 ~~i~V~~GdtV~f~n~~------~~H~v~~~~--------~--~~-p--~~---~-----~~~~~~pG~t~~--~tF~~~ 71 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTD------KGHNVETIK--------G--MA-P--DG---A-----DYVKTTVGQEAV--VKFDKE 71 (123)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECT--------T--SS-C--TT---C-----CCCBCCTTSCEE--EECCSC
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEec--------c--cC-C--CC---c-----cceecCCCCEEE--EEeCCC
Confidence 45788999999986543 245555431 0 00 0 00 0 011234676544 555899
Q ss_pred eeeEEeeechhhhhcccEEEEEEeCC
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVKNG 554 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~~~ 554 (571)
|.|.|+|- .|...||.+.+.|.++
T Consensus 72 G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 72 GVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp EEEEEECS--TTTTTTCEEEEEESSC
T ss_pred eEEEEEeC--CccccCCEEEEEEcCC
Confidence 99999997 5999999999999864
No 128
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.13 E-value=0.026 Score=59.66 Aligned_cols=79 Identities=15% Similarity=0.316 Sum_probs=61.5
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|+.|+|++.|.....+..|.|.+.+... -+.+.||....+.|+++.|
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI--------------------------K~DaiPGrtnsvtFtadkP 611 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV--------------------------SMEISPQQTSSITFVADKP 611 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE--------------------------EEEECTTCEEEEEEECCSC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc--------------------------eeeeCCCCeEEEEEEcCCC
Confidence 46789999999999999532124677777665432 1367789999999999999
Q ss_pred eeeEEeeechhhh-hcccEEEEEEeC
Q 039250 529 GVWFMHCHFDIHQ-SWGLGTVLIVKN 553 (571)
Q Consensus 529 G~w~~HCHil~H~-d~GM~~~~~V~~ 553 (571)
|.|.+||...-|. +.+|.+.+.|.+
T Consensus 612 GvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 612 GLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred EEEEEECCCcCCCCcccceEEEEEec
Confidence 9999999987664 478999999864
No 129
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.88 E-value=0.045 Score=48.85 Aligned_cols=74 Identities=18% Similarity=0.264 Sum_probs=54.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeecc-cc-cc
Q 039250 64 PVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHV-SW-LR 141 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~-~~-~~ 141 (571)
..|.++.|++|++.++|. +..+++...++. . +.-+.||+..++.|++ +++|+|++.|.. -| .-
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------i----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTN---------I----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSS---------C----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCC---------e----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 689999999999999996 333333322221 1 1346689999999998 999999999984 22 34
Q ss_pred cceeeEEEEec
Q 039250 142 GTVYGAIVVYP 152 (571)
Q Consensus 142 ~Gl~G~liV~~ 152 (571)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 58999999863
No 130
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.34 E-value=0.08 Score=45.55 Aligned_cols=71 Identities=21% Similarity=0.307 Sum_probs=52.3
Q ss_pred EEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCce
Q 039250 450 TKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPG 529 (571)
Q Consensus 450 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG 529 (571)
.+.++.|+.|+|++.|.. ..|. |.+-+.+ . -+.+.||....+.|+++.||
T Consensus 61 ~l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~~-----------------~--k~d~~PG~~~~~~~~~~~~G 110 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD----VIHG-------FHVEGTN-----------------I--NVEVLPGEVSTVRYTFKRPG 110 (135)
T ss_dssp SEEEETTSEEEEEEEBSS----SCEE-------EEETTSS-----------------C--EEEECBTBCEEEEEECCSCE
T ss_pred EEEEcCCCEEEEEEEeCC----ccce-------EEecCCC-----------------c--eeEeCCCCcEEEEEEcCCCE
Confidence 467899999999998742 3343 4431110 1 14567888888999999999
Q ss_pred eeEEeeec---hhhhhcccEEEEEEe
Q 039250 530 VWFMHCHF---DIHQSWGLGTVLIVK 552 (571)
Q Consensus 530 ~w~~HCHi---l~H~d~GM~~~~~V~ 552 (571)
.|.++|.. ..| .+|-..++|.
T Consensus 111 ~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 111 EYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEECcccCCCCc--CCCEEEEEEE
Confidence 99999987 556 5999988885
No 131
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.25 E-value=0.028 Score=47.55 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=46.8
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|++|.|+..+ ..|-+++..- .+..... .+.+.+|....+. ++.|
T Consensus 21 ~~i~V~~GdtV~f~n~d------~~H~v~~~~~----------~~p~~~~-----------~~~~~~g~t~~~t--F~~~ 71 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD------KGHNVETIKG----------MIPDGAE-----------AFKSKINENYKVT--FTAP 71 (122)
T ss_dssp SEEEECTTEEEEEEESS------SSCCCEECTT----------CSCTTCC-----------CCBCCTTCCEEEE--ECSC
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEccc----------ccCCCcc-----------eeecCCCCEEEEE--eCCC
Confidence 45788999999987442 2566666531 1110000 1123466655444 4899
Q ss_pred eeeEEeeechhhhhcccEEEEEEeCC
Q 039250 529 GVWFMHCHFDIHQSWGLGTVLIVKNG 554 (571)
Q Consensus 529 G~w~~HCHil~H~d~GM~~~~~V~~~ 554 (571)
|.|.|+|-+ |.. |.+.+.|.+.
T Consensus 72 G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 72 GVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEETT--EEE--EEEEEEESSS
T ss_pred EEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 999999987 665 9999999863
No 132
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=94.80 E-value=0.053 Score=48.39 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=61.3
Q ss_pred eEEEe-eCCCEEEEEEeeCCCC--CCCCCCeeecCceEEEEEeccCCCCC--------CCCCCCC-CC-CCcceeEEeCC
Q 039250 449 RTKVL-EFGTRVQIILQDTATV--TTENHPIHLHGYNFYVVGYGTGNYDP--------QTANFNL-ID-PPYMNTIGVPV 515 (571)
Q Consensus 449 ~~~~~-~~g~~v~~~l~N~~~~--~~~~HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~~-~~-p~~rDTv~vpp 515 (571)
..+.+ +.|+.|.|++.|.+.. ..+.|-|-| ...+. ++. ....|-. .+ ..+..+..|.|
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi-------~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~p 128 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNLVI-------AKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGG 128 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEE-------EEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCT
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceEEe-------ccCcc--hhhhHHHhhhccccccccccccchhccceeeCC
Confidence 45788 8999999999996521 012344333 33210 000 0000000 01 12345667899
Q ss_pred CcEEEEEEEec--CceeeEEeeechhhhhcccEEEEEEe
Q 039250 516 GGWAAIRFTAD--NPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 516 ~g~~~irf~ad--npG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
|+...|.|.++ .||.|-|+|-+--|.. ||-+.++|.
T Consensus 129 Get~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 129 GEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 99999999988 8999999999999988 999999986
No 133
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.61 E-value=0.14 Score=43.56 Aligned_cols=94 Identities=13% Similarity=0.135 Sum_probs=62.0
Q ss_pred eEEEeeCC-CEEEEEEeeCCCCC--CCCCCeeecCceEEEEEeccCCCCC---------CCCCCCC-CCC-CcceeEEeC
Q 039250 449 RTKVLEFG-TRVQIILQDTATVT--TENHPIHLHGYNFYVVGYGTGNYDP---------QTANFNL-IDP-PYMNTIGVP 514 (571)
Q Consensus 449 ~~~~~~~g-~~v~~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~~~g~~~~---------~~~~~~~-~~p-~~rDTv~vp 514 (571)
..+.++.| +.+.+++.|.+... .+.|-|- +...+. ++. ....|-. .++ ....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~v-------i~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWV-------LAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCE-------EEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceE-------EecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 56789999 99999999965310 1235443 333220 000 0000100 011 233566789
Q ss_pred CCcEEEEEEEec---CceeeEEeeechhhhhcccEEEEEEe
Q 039250 515 VGGWAAIRFTAD---NPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 515 p~g~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
||+...|.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999997 9999999999988988 899999886
No 134
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.11 E-value=0.45 Score=42.31 Aligned_cols=73 Identities=19% Similarity=0.297 Sum_probs=55.5
Q ss_pred EEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCce
Q 039250 450 TKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPG 529 (571)
Q Consensus 450 ~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG 529 (571)
.+.++.|+.|++.+.|.. ..|.|-+=.... -+.+.||....+.|+++.||
T Consensus 94 ~l~VP~G~~Vr~~vTS~D----ViHsf~IP~lgi--------------------------k~da~PG~~n~~~~~~~kpG 143 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPD----VIHGFHVEGTNI--------------------------NVEVLPGEVSTVRYTFKRPG 143 (168)
T ss_dssp SEEEETTSEEEEEEECSS----SCEEEEETTSSC--------------------------EEEECTTBCEEEEEECCSCE
T ss_pred EEEEeCCCeEEEEEecCC----ceEEEEECCCCe--------------------------EEEecCCceeEEEEEeCCCE
Confidence 367899999999999853 566654432211 13566888888999999999
Q ss_pred eeEEeeec-hhhhhcccEEEEEEe
Q 039250 530 VWFMHCHF-DIHQSWGLGTVLIVK 552 (571)
Q Consensus 530 ~w~~HCHi-l~H~d~GM~~~~~V~ 552 (571)
.|.+.|.. --+-+.+|-..+.|.
T Consensus 144 ~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 144 EYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEECCcCCCCCcCCCEEEEEEe
Confidence 99999985 446778999999885
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=92.41 E-value=0.35 Score=41.04 Aligned_cols=94 Identities=15% Similarity=0.183 Sum_probs=60.4
Q ss_pred eEEEe-eCCCEEEEEEeeCCCCC--CCCCCeeecCceEEEEEeccCCCCC--------C-CCCCCC-CCC-CcceeEEeC
Q 039250 449 RTKVL-EFGTRVQIILQDTATVT--TENHPIHLHGYNFYVVGYGTGNYDP--------Q-TANFNL-IDP-PYMNTIGVP 514 (571)
Q Consensus 449 ~~~~~-~~g~~v~~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~~~g~~~~--------~-~~~~~~-~~p-~~rDTv~vp 514 (571)
..+.+ +.|+.+.+++.|.+... .+.|-|-| ...+. ++. . ...|-. .++ ....|..|.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~~--~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 87 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKSD--ESAVATDGMKAGLNNDYVKAGDERVIAHTSVIG 87 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETTH--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEE-------ccccc--hhhHHHhhhhccccccccccccchhhccceeeC
Confidence 45678 88999999999975310 11354433 22110 000 0 001100 111 133456789
Q ss_pred CCcEEEEEEEec--Ccee-eEEeeechhhhhcccEEEEEEe
Q 039250 515 VGGWAAIRFTAD--NPGV-WFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 515 p~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 552 (571)
||+...|.|.+. .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 88 pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 88 GGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999999998 8995 999999999988 999999885
No 136
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.02 E-value=0.4 Score=40.69 Aligned_cols=95 Identities=12% Similarity=0.161 Sum_probs=59.8
Q ss_pred eEEEe-eCCCEEEEEEeeCCCCC--CCCCCeeecCceEEEEEeccC------CCCCC-CCCCCC-CCC-CcceeEEeCCC
Q 039250 449 RTKVL-EFGTRVQIILQDTATVT--TENHPIHLHGYNFYVVGYGTG------NYDPQ-TANFNL-IDP-PYMNTIGVPVG 516 (571)
Q Consensus 449 ~~~~~-~~g~~v~~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~~~g------~~~~~-~~~~~~-~~p-~~rDTv~vpp~ 516 (571)
..+.+ +.|+.|.+++.|.+... .+.|-|-+ ...+.- ..... ...|-. .++ ....|-.|.||
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pG 90 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAG 90 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTT
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCC
Confidence 45788 89999999999975310 11355443 222100 00000 001100 111 12345568999
Q ss_pred cEEEEEEEec--Ccee-eEEeeechhhhhcccEEEEEE
Q 039250 517 GWAAIRFTAD--NPGV-WFMHCHFDIHQSWGLGTVLIV 551 (571)
Q Consensus 517 g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V 551 (571)
+...|.|.+. .||. |-|.|-+--|.. ||-+.+.|
T Consensus 91 et~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 91 EKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp CEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 9999999998 7876 999999999988 89999987
No 137
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=91.50 E-value=0.56 Score=39.81 Aligned_cols=94 Identities=14% Similarity=0.177 Sum_probs=60.0
Q ss_pred eEEEe-eCCCEEEEEEeeCCCC--CCCCCCeeecCceEEEEEeccCCCCC---------CCCCCCC-CCC-CcceeEEeC
Q 039250 449 RTKVL-EFGTRVQIILQDTATV--TTENHPIHLHGYNFYVVGYGTGNYDP---------QTANFNL-IDP-PYMNTIGVP 514 (571)
Q Consensus 449 ~~~~~-~~g~~v~~~l~N~~~~--~~~~HP~HlHG~~F~Vl~~~~g~~~~---------~~~~~~~-~~p-~~rDTv~vp 514 (571)
..+.+ +.|+.|.+++.|.+.. ..+.|-|-| ...+. ++. ....|-. .++ ....+..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVL-------TKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEE-------EEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEE-------cCccc--hhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 45778 8899999999997531 012354433 33210 000 0001100 111 123455689
Q ss_pred CCcEEEEEEEec--Ccee-eEEeeechhhhhcccEEEEEEe
Q 039250 515 VGGWAAIRFTAD--NPGV-WFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 515 p~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 552 (571)
||+...|.|.++ .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 89 GGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999999999998 7866 999999999988 899999885
No 138
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=81.53 E-value=9.1 Score=31.73 Aligned_cols=75 Identities=15% Similarity=0.103 Sum_probs=51.4
Q ss_pred CCCEE--EEEEeecCccceEEEEEc-CceeEEEEe--CCCCCC--------eeEeceEEeCCCceEEEEEEeCC--CCce
Q 039250 223 PGKTY--LLRLINAGLNMENFFAIA-NHKLTIVEA--DAEYTK--------PFSTDRVMLGPGQTVNVLVTADQ--PIGK 287 (571)
Q Consensus 223 ~G~~~--rlRliNa~~~~~~~~~i~-gh~~~via~--DG~~~~--------P~~~d~l~l~pgeR~dv~v~~~~--~~g~ 287 (571)
.|+.+ .|.+.|.+. ....+.+. |+.+.++-. +|..+- ........|.|||...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~-~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSE-RAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSS-SCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCC-CcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45554 577789885 44556765 666555554 465441 22457899999999999999884 4799
Q ss_pred eEEEeeccccc
Q 039250 288 YSMAMGPYMSA 298 (571)
Q Consensus 288 ~~i~~~~~~~~ 298 (571)
|.+.+......
T Consensus 95 Ytl~a~l~~~~ 105 (120)
T 3isy_A 95 YEVKVTFKGRA 105 (120)
T ss_dssp EEEEEEECCEE
T ss_pred EEEEEEEEeee
Confidence 99998765444
No 139
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=79.84 E-value=1.9 Score=36.15 Aligned_cols=95 Identities=12% Similarity=0.176 Sum_probs=58.6
Q ss_pred eEEEeeC-CCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccC-CCC-CC-----CCCCC-C-CCCCcceeEEeCCCcE
Q 039250 449 RTKVLEF-GTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTG-NYD-PQ-----TANFN-L-IDPPYMNTIGVPVGGW 518 (571)
Q Consensus 449 ~~~~~~~-g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g-~~~-~~-----~~~~~-~-~~p~~rDTv~vpp~g~ 518 (571)
..+.++. |+.|+++|.|.+.. |--.=||.|-+...+.- ... .. ...|- . .......|..|.||+.
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCE
T ss_pred CEEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcE
Confidence 4567865 99999999997631 11111344444322100 000 00 01111 0 1234567778999999
Q ss_pred EEEEEEec---CceeeEEeeechhhhhcccEEEEEEe
Q 039250 519 AAIRFTAD---NPGVWFMHCHFDIHQSWGLGTVLIVK 552 (571)
Q Consensus 519 ~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 552 (571)
..|.|.+. .+|.|-|-|- -|. ||-+.+.|+
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 99999988 8999999999 888 999999873
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=71.52 E-value=34 Score=28.21 Aligned_cols=72 Identities=10% Similarity=0.121 Sum_probs=45.7
Q ss_pred EECCcCCCceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCc---cccCcCCCCCeEEEEEEeCC--CCcc
Q 039250 56 TVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAY---ITQCPIQSGQTFTYEFTMFQ--QKGT 130 (571)
Q Consensus 56 ~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~---~~q~~i~PG~~~~y~~~~~~--~~Gt 130 (571)
..|-+--.=+|+..-|++..+.|.+...+ ..| .|+||-.. .....|+||++.+|+...++ .+|+
T Consensus 26 v~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 26 LKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp EEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred EEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 34433333567777777777777765322 111 24666543 23466999999999999962 5899
Q ss_pred eeEeeccc
Q 039250 131 FFWHAHVS 138 (571)
Q Consensus 131 ~wYH~H~~ 138 (571)
|..+.-.-
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 98776443
No 141
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=51.25 E-value=36 Score=32.93 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=56.7
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
+.+.++.|+.|++.+.+.. ..|.|.+=.... -+.+-||....+.|.++.|
T Consensus 189 N~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~--------------------------k~daiPG~~n~~~~~~~~~ 238 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD----VIHAWTIPAFAV--------------------------KQDAVPGRIAQLWFSVDQE 238 (298)
T ss_dssp SCEEEESSSEEEEEEEESS----SCEEEEEGGGTE--------------------------EEEECTTCCEEEEEECSSS
T ss_pred ceEEEEcCCEEEEEEEeCC----ccceeeEcccCc--------------------------eEEecCCceEEEEEEeCCC
Confidence 5678999999999999853 566655533221 1344567788899999999
Q ss_pred eeeEEeeechh-hhhcccEEEEEEeCCC
Q 039250 529 GVWFMHCHFDI-HQSWGLGTVLIVKNGK 555 (571)
Q Consensus 529 G~w~~HCHil~-H~d~GM~~~~~V~~~~ 555 (571)
|.|...|.-.- .-+..|-..++|.+.+
T Consensus 239 G~y~g~CsE~CG~~Hs~M~~~v~vvs~~ 266 (298)
T 3hb3_B 239 GVYFGQCSELCGINHAYMPIVVKAVSQE 266 (298)
T ss_dssp EEEEECCCSCCSTTTTSCCEEEEEECHH
T ss_pred EEEEEEcccccCcCccCCeeEEEEEcHH
Confidence 99999998655 4466788888887543
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=50.85 E-value=61 Score=29.44 Aligned_cols=63 Identities=11% Similarity=0.165 Sum_probs=45.3
Q ss_pred eEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeeccc
Q 039250 217 YKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYM 296 (571)
Q Consensus 217 p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 296 (571)
..+.+..|+.+||+|.+... .+.|.|..... .+...||..-.+-+.+++ +|.|..+|..+.
T Consensus 41 n~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgv----------------K~daiPGr~n~l~~~~~~-pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNSV--MHSFFIPRLGS----------------QIYAMAGMQTRLHLIANE-PGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESSS--CEEEEEGGGTE----------------EEEECTTCCEEEEECCSS-SEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCCc--eeeEEecccCc----------------EEEecCCceEEEEEEeCC-CeEEEEEccccc
Confidence 46899999999999987653 44455554332 334557777788887875 699999998765
Q ss_pred cc
Q 039250 297 SA 298 (571)
Q Consensus 297 ~~ 298 (571)
..
T Consensus 102 G~ 103 (205)
T 1cyx_A 102 GP 103 (205)
T ss_dssp ST
T ss_pred cc
Confidence 44
No 143
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=50.01 E-value=38 Score=27.64 Aligned_cols=46 Identities=20% Similarity=0.393 Sum_probs=31.2
Q ss_pred EEEEEEeecCccc-eEEEEEcCc-eeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEe
Q 039250 226 TYLLRLINAGLNM-ENFFAIANH-KLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTA 281 (571)
Q Consensus 226 ~~rlRliNa~~~~-~~~~~i~gh-~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~ 281 (571)
.|+|||+|.+... .+.+.+.|. .+.++ | + ..+.+.||+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 5999999999554 456777764 23332 2 1 14999999977765554
No 144
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=49.17 E-value=16 Score=30.62 Aligned_cols=49 Identities=18% Similarity=0.234 Sum_probs=25.5
Q ss_pred EEEEEeCCCCCe---eEEecccccCCCC---CCCCCCccccCcCCCCCeEEEEEEe
Q 039250 75 IVKVTNQSPYNA---TIHWHGVRQRLSC---WFDGPAYITQCPIQSGQTFTYEFTM 124 (571)
Q Consensus 75 ~v~v~N~l~~~~---~iH~HG~~~~~~~---~~DG~~~~~q~~i~PG~~~~y~~~~ 124 (571)
+|++.|....+. +=||.=....+.- ..+||-| .|-.|.||++|.|.=-.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg~ 88 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTSGV 88 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeCCc
Confidence 456666655443 2355432211100 0156554 35668999988886543
No 145
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=48.32 E-value=38 Score=28.24 Aligned_cols=60 Identities=17% Similarity=0.286 Sum_probs=33.7
Q ss_pred ceEEEecCCEEEEEEE---eCCCCCe--eEE--ecccccCCCC-CCCCCCccccCcCCCCCeEEEEEEe
Q 039250 64 PVVYAQEDDRIIVKVT---NQSPYNA--TIH--WHGVRQRLSC-WFDGPAYITQCPIQSGQTFTYEFTM 124 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~---N~l~~~~--~iH--~HG~~~~~~~-~~DG~~~~~q~~i~PG~~~~y~~~~ 124 (571)
+.=.+++|+.+.+.+. |...... .+| ..|+..+-.. ..|+= ....|||.+|+.++|.+..
T Consensus 25 ~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC-~~~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 25 DPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNAC-HFMKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp SCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGG-GTSCSSBCTTCEEEEEEEE
T ss_pred CCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCcc-CCccCcccCCEEEEEEEEe
Confidence 4456778887777766 2222222 222 2444443211 11332 2256999999999999877
No 146
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=46.78 E-value=8.6 Score=31.68 Aligned_cols=85 Identities=13% Similarity=-0.027 Sum_probs=0.0
Q ss_pred EEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeeccccc-ccce
Q 039250 66 VYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWL-RGTV 144 (571)
Q Consensus 66 i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~-~~Gl 144 (571)
++++.||.|+.++......-+-+---+....... .+|..-.+-...+++ ..+|++||-|-..+. ..||
T Consensus 28 ~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~----------~~~~~~~~G~~~v~l-~~~G~~yFic~~~~HC~~Gm 96 (116)
T 1x9u_A 28 KTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKE----------NPISHMTTPPVKIML-NTTGPQYYICTVGDHCRVGQ 96 (116)
T ss_dssp CCEETTCEEEECCCTTTCCEEEECHHHHHTTCCS----------SCSEEECSSSEEEEC-CSCEEEEEECCSTTTTTTTC
T ss_pred ccCcCCCEEEEEecCCCCeEEEEChhhcCccCCC----------CCccccCCCCeEEEE-CCCCCEEEECCCCCccccCC
Q ss_pred eeEE-EEecCCCCCCCCC
Q 039250 145 YGAI-VVYPKTGVPYPFQ 161 (571)
Q Consensus 145 ~G~l-iV~~~~~~~~~~~ 161 (571)
..+| .|........+-+
T Consensus 97 kl~In~V~~~~~~~~~~~ 114 (116)
T 1x9u_A 97 KLSINVVGAGGAGGGATP 114 (116)
T ss_dssp EEEEEEECC---------
T ss_pred EEEEEEECCCCCCCCCCC
No 147
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=46.52 E-value=15 Score=30.62 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=14.9
Q ss_pred CCCCccccCcCCCCCeEEEEEEe
Q 039250 102 DGPAYITQCPIQSGQTFTYEFTM 124 (571)
Q Consensus 102 DG~~~~~q~~i~PG~~~~y~~~~ 124 (571)
+||-| .|-.|.||++|.|.=-.
T Consensus 66 ~GVVG-~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 66 DGVVG-EQPRIKANDEYTYSSGT 87 (126)
T ss_dssp ESBTT-BCCEECTTCEEEEEEEE
T ss_pred CceEc-CCCcCCCCCceEEeCCc
Confidence 55544 35668999988886544
No 148
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=43.34 E-value=52 Score=31.15 Aligned_cols=76 Identities=14% Similarity=0.176 Sum_probs=54.5
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
+.+.++.|+.|++.+.+.. ..|.|-+=.... . +.+-||....+.|+++.|
T Consensus 171 n~l~lP~g~~v~~~~tS~D----ViHsf~ip~l~~-----------------------k---~da~PG~~n~~~~~~~~~ 220 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD----VIHSWTVPAFGV-----------------------K---QDAVPGRLAQLWFRAERE 220 (262)
T ss_dssp SCEEEETTSEEEEEEEESS----SCEEEEEGGGTE-----------------------E---EEECBTCCEEEEEECCSC
T ss_pred ceEEEecCCEEEEEEEECc----ccceeeecccCc-----------------------e---EEecCCceeEEEEecCCc
Confidence 4578999999999999753 556555433221 1 234467778889999999
Q ss_pred eeeEEeeechhhh-hcccEEEEEEeCC
Q 039250 529 GVWFMHCHFDIHQ-SWGLGTVLIVKNG 554 (571)
Q Consensus 529 G~w~~HCHil~H~-d~GM~~~~~V~~~ 554 (571)
|.+...|--.--. +..|-..++|.+.
T Consensus 221 G~y~g~Cse~CG~~H~~M~~~v~vv~~ 247 (262)
T 2gsm_B 221 GIFFGQCSELCGISHAYMPITVKVVSE 247 (262)
T ss_dssp EEEEECCCSCCSTTGGGCCEEEEEECH
T ss_pred EEEEEEChHhcccCcccCeEEEEEEcH
Confidence 9999999866644 5567777777653
No 149
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=42.36 E-value=80 Score=28.65 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=53.2
Q ss_pred eEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecCc
Q 039250 449 RTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNP 528 (571)
Q Consensus 449 ~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnp 528 (571)
..+.++.|+.|++.+.+.. ..|.|-+=.... -+.+-||....+.|.++.|
T Consensus 41 n~l~lP~g~~V~~~lTS~D----ViHSF~IP~lgv--------------------------K~daiPGr~n~l~~~~~~p 90 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS----VMHSFFIPRLGS--------------------------QIYAMAGMQTRLHLIANEP 90 (205)
T ss_dssp SEEEEETTSCEEEEEEESS----SCEEEEEGGGTE--------------------------EEEECTTCCEEEEECCSSS
T ss_pred ceEEEeCCCEEEEEEecCC----ceeeEEecccCc--------------------------EEEecCCceEEEEEEeCCC
Confidence 4578899999999999853 455544432211 1344567888899999999
Q ss_pred eeeEEeeechhhh-hcccEEEEEEe
Q 039250 529 GVWFMHCHFDIHQ-SWGLGTVLIVK 552 (571)
Q Consensus 529 G~w~~HCHil~H~-d~GM~~~~~V~ 552 (571)
|.|...|-..-.. +..|-..++|.
T Consensus 91 G~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 91 GTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred eEEEEEcccccccchhhceEEEEEE
Confidence 9999999876655 45677777776
No 150
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=41.50 E-value=45 Score=27.76 Aligned_cols=62 Identities=19% Similarity=0.206 Sum_probs=34.4
Q ss_pred ceEEEecCCEEEEEEE---eCCCCCeeEEe----cccccCC-CCCCCCCCccccCcCCCCCeEEEEEEeC
Q 039250 64 PVVYAQEDDRIIVKVT---NQSPYNATIHW----HGVRQRL-SCWFDGPAYITQCPIQSGQTFTYEFTMF 125 (571)
Q Consensus 64 P~i~v~~Gd~v~v~v~---N~l~~~~~iH~----HG~~~~~-~~~~DG~~~~~q~~i~PG~~~~y~~~~~ 125 (571)
+.=.+++|+.+.+.+. |.......... .|+.++- ..-.|+=.....|||.+|+.++|.+.++
T Consensus 26 ~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 26 QPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 4456677887777766 33222222222 3444321 1112432222469999999999998884
No 151
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=41.39 E-value=22 Score=30.17 Aligned_cols=44 Identities=30% Similarity=0.430 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCeeE---Eec-----ccccCCCCCCCCCCccccCcCCCCCeEEEE
Q 039250 75 IVKVTNQSPYNATI---HWH-----GVRQRLSCWFDGPAYITQCPIQSGQTFTYE 121 (571)
Q Consensus 75 ~v~v~N~l~~~~~i---H~H-----G~~~~~~~~~DG~~~~~q~~i~PG~~~~y~ 121 (571)
+|++.|....+.-| ||. |-...... +||-| .|-.|.||++|.|.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G--~GVVG-eqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRG--LGVVG-QQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEE--ESSSS-CCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEC--CCeec-CCCcCCCCCceEEc
No 152
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=41.23 E-value=33 Score=27.38 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=33.6
Q ss_pred EEEEEEEeCCCCC---eeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEe-CCCCcc
Q 039250 73 RIIVKVTNQSPYN---ATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTM-FQQKGT 130 (571)
Q Consensus 73 ~v~v~v~N~l~~~---~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~-~~~~Gt 130 (571)
.++|.|+|-|+.+ ..++..|.-.. .+ --.....|.||++..+++.. |..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~-----~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQ-----RP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTE-----EE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCC-----cc-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 5778899998865 34565553221 11 11122469999999999988 455665
No 153
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=38.32 E-value=20 Score=30.23 Aligned_cols=22 Identities=14% Similarity=0.169 Sum_probs=15.0
Q ss_pred CCCCccccCcCCCCCeEEEEEEe
Q 039250 102 DGPAYITQCPIQSGQTFTYEFTM 124 (571)
Q Consensus 102 DG~~~~~q~~i~PG~~~~y~~~~ 124 (571)
+||-| .|-.|.||++|+|.=-.
T Consensus 66 ~GVVG-eqP~L~PGe~F~YtSg~ 87 (134)
T 1tza_A 66 AGVVG-ETPTIPPNTAYQYTSGT 87 (134)
T ss_dssp ESBTT-BCCEECTTEEEEEEEEE
T ss_pred CceEc-CCCcCCCCCceEEcCCc
Confidence 55544 35668999988886544
No 154
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=36.78 E-value=22 Score=28.86 Aligned_cols=80 Identities=14% Similarity=0.115 Sum_probs=0.0
Q ss_pred EEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCCccccCcCCCCCeEEEEEEeCCCCcceeEeeccccc-cccee
Q 039250 67 YAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWL-RGTVY 145 (571)
Q Consensus 67 ~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q~~i~PG~~~~y~~~~~~~~Gt~wYH~H~~~~-~~Gl~ 145 (571)
+++.||.|+.+..+....-+-+---+....... .+|..-.+-...+++ ..+|++||-|-..+. ..||-
T Consensus 29 ~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~----------~p~~~~~~G~~~v~L-~~~G~~yFic~~~gHC~~GmK 97 (109)
T 1ws8_A 29 KFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS----------SPAASYTSGADSIPL-KRPGTFYFLCGIPGHCQLGQK 97 (109)
T ss_dssp CBCTTCEEEEECCTTTCCEEEECHHHHHHTCCS----------SCSEEECSSEEEEEC-CSSEEEEEECCSTTTTTTTCE
T ss_pred cCcCCCEEEEeecCCCceEEEEChHHCCcccCC----------CcccccCCCCEEEEE-CCCcCEEEECCCCCcccCCCE
Q ss_pred eEEEEecCCCCC
Q 039250 146 GAIVVYPKTGVP 157 (571)
Q Consensus 146 G~liV~~~~~~~ 157 (571)
.++.|.......
T Consensus 98 l~I~V~~~~s~~ 109 (109)
T 1ws8_A 98 VEIKVDPGSSSA 109 (109)
T ss_dssp EEEEECC-----
T ss_pred EEEEEcCCCCCC
No 155
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=31.93 E-value=77 Score=31.26 Aligned_cols=16 Identities=31% Similarity=0.522 Sum_probs=14.4
Q ss_pred cCcCCCCCeEEEEEEe
Q 039250 109 QCPIQSGQTFTYEFTM 124 (571)
Q Consensus 109 q~~i~PG~~~~y~~~~ 124 (571)
..||+|||+.+.+..+
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 4689999999999988
No 156
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=30.73 E-value=1.6e+02 Score=28.39 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=45.7
Q ss_pred eEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeeccc
Q 039250 217 YKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYM 296 (571)
Q Consensus 217 p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 296 (571)
..+.+..|+.+|+++-+.. -.+.|.+..... .+..-||..-.+-+.+++ +|.|..+|..+.
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~----------------k~daiPG~~n~~~~~~~~-~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAV----------------KQDAVPGRIAQLWFSVDQ-EGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTE----------------EEEECTTCCEEEEEECSS-SEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCc----------------eEEecCCceEEEEEEeCC-CEEEEEEccccc
Confidence 4689999999999998855 344455554332 334567888888888875 699999998764
Q ss_pred cc
Q 039250 297 SA 298 (571)
Q Consensus 297 ~~ 298 (571)
..
T Consensus 250 G~ 251 (298)
T 3hb3_B 250 GI 251 (298)
T ss_dssp ST
T ss_pred Cc
Confidence 44
No 157
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=29.71 E-value=1.5e+02 Score=27.88 Aligned_cols=63 Identities=13% Similarity=0.158 Sum_probs=44.9
Q ss_pred eEEEEeCCCEEEEEEeecCccceEEEEEcCceeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCCCCceeEEEeeccc
Q 039250 217 YKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYM 296 (571)
Q Consensus 217 p~l~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 296 (571)
..+.++.|+.+|+++.+.. -.+.|.+.+...+ +..-||..-.+-+.+++ +|.|..+|..+.
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k----------------~da~PG~~n~~~~~~~~-~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVK----------------QDAVPGRLAQLWFRAER-EGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGGTEE----------------EEECBTCCEEEEEECCS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeecccCce----------------EEecCCceeEEEEecCC-cEEEEEEChHhc
Confidence 3589999999999998664 3445566544332 34557777778888875 699999998764
Q ss_pred cc
Q 039250 297 SA 298 (571)
Q Consensus 297 ~~ 298 (571)
..
T Consensus 232 G~ 233 (262)
T 2gsm_B 232 GI 233 (262)
T ss_dssp ST
T ss_pred cc
Confidence 44
No 158
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=29.65 E-value=1.2e+02 Score=27.93 Aligned_cols=77 Identities=12% Similarity=0.155 Sum_probs=53.9
Q ss_pred ceEEEeeCCCEEEEEEeeCCCCCCCCCCeeecCceEEEEEeccCCCCCCCCCCCCCCCCcceeEEeCCCcEEEEEEEecC
Q 039250 448 TRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADN 527 (571)
Q Consensus 448 ~~~~~~~~g~~v~~~l~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adn 527 (571)
.+.+.++.|+.+++.+.+.. ..|.|-+=.... . +..-||....+.|+++.
T Consensus 139 dn~lvlP~~~~Vr~~vtS~D----ViHsf~vP~lg~-----------------------K---~DaiPGr~n~~~~~~~~ 188 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSED----VLHSWAVPSLGL-----------------------K---TDAIPGRLNQTTLMSSR 188 (227)
T ss_dssp SSCEEEETTSCEEEEEEESS----SCEEEEEGGGTE-----------------------E---EEECTTCCEEEEECCSS
T ss_pred CceEEEecCCEEEEEEEeCc----ccceeeecccCc-----------------------E---EEecCCceEEEEEecCC
Confidence 35678999999999998753 556555433221 1 23346777788999999
Q ss_pred ceeeEEeeechhhh-hcccEEEEEEeCC
Q 039250 528 PGVWFMHCHFDIHQ-SWGLGTVLIVKNG 554 (571)
Q Consensus 528 pG~w~~HCHil~H~-d~GM~~~~~V~~~ 554 (571)
||.+...|.-.-.. +.-|-..++|.+.
T Consensus 189 ~G~y~g~Cse~CG~~Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 189 PGLYYGQCSEICGSNHSFMPIVLELVPL 216 (227)
T ss_dssp CEEEEECCCSCCSTTGGGCCEEEEEECH
T ss_pred cEEEEEEehhhcccccccCeEEEEEEcH
Confidence 99999999876654 4456677776643
No 159
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=28.68 E-value=1.6e+02 Score=23.89 Aligned_cols=67 Identities=7% Similarity=0.002 Sum_probs=37.7
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEecccccCCCCCCCCCC----cc----ccCcCCCCCeEEEEEEeCCCCcc
Q 039250 63 GPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPA----YI----TQCPIQSGQTFTYEFTMFQQKGT 130 (571)
Q Consensus 63 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~----~q~~i~PG~~~~y~~~~~~~~Gt 130 (571)
|-+|.++.||++.|.|.-+.....+-......-...--.+|.- .. ..-.+-.|+...+.|++ -.+|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCce
Confidence 4589999999999999977655555555431100000001110 00 00124456788888888 66775
No 160
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=25.52 E-value=1.2e+02 Score=30.21 Aligned_cols=53 Identities=21% Similarity=0.135 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCCee---EEecccccCCCCC-------------CCCCCccccCcCCCCCeEEEEEEeCCCC
Q 039250 73 RIIVKVTNQSPYNAT---IHWHGVRQRLSCW-------------FDGPAYITQCPIQSGQTFTYEFTMFQQK 128 (571)
Q Consensus 73 ~v~v~v~N~l~~~~~---iH~HG~~~~~~~~-------------~DG~~~~~q~~i~PG~~~~y~~~~~~~~ 128 (571)
++.++|+|+.+++.. +-.-|++...... .+|.- ... ||+|||+.+.+.++ +.+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a-~da 369 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKI-QDA 369 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEE-ECH
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEe-ehH
No 161
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=24.36 E-value=3e+02 Score=22.78 Aligned_cols=29 Identities=3% Similarity=0.116 Sum_probs=21.4
Q ss_pred CCceEEEecCCEEEEEEEeCCCCCeeEEe
Q 039250 62 PGPVVYAQEDDRIIVKVTNQSPYNATIHW 90 (571)
Q Consensus 62 pgP~i~v~~Gd~v~v~v~N~l~~~~~iH~ 90 (571)
-|=+|.++.||++.|.|.-+.+...+-..
T Consensus 31 n~~~I~v~~Ge~~~I~L~~NPTTGY~W~~ 59 (131)
T 2h7w_A 31 NGATLTVAVGELVEIQLPSNPTTGFAWYF 59 (131)
T ss_dssp TTCEEEECTTCEEEEEEEECGGGSCEEEB
T ss_pred CCCEEEEeCCCEEEEEeCCCCCCCeEEEE
Confidence 35689999999999999876544444333
No 162
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=23.79 E-value=1.7e+02 Score=23.81 Aligned_cols=59 Identities=8% Similarity=0.039 Sum_probs=36.8
Q ss_pred EEecCCE--EEEEEEeCCCCCeeEEecccccCCCCCCCCCCcccc-CcCCCCCeEEEEEEeCCCCc
Q 039250 67 YAQEDDR--IIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQ-CPIQSGQTFTYEFTMFQQKG 129 (571)
Q Consensus 67 ~v~~Gd~--v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~q-~~i~PG~~~~y~~~~~~~~G 129 (571)
-+.+||. |+++|.|.+.+...+...=. .+...++.+...+ .-|.++++.+|.|.+ ..-|
T Consensus 17 sv~rgE~~~~~~~V~nyl~~~~~v~v~L~---~s~~~~~~~~~~~t~Clc~~~~~t~~W~i-~~lg 78 (118)
T 3es6_B 17 SVRPNDEVTAVLAVQTELKECMVVKTYLI---SSIPLQGAFNYKYTACLCDDNPKTFYWDF-YTNR 78 (118)
T ss_dssp EECSSCCEEEEEEEEECCSSCEEEEEEEE---ESSCCCSGGGCEEEEEECSSSCEEEEEEE-CCSS
T ss_pred eEecCCEEEEEEEEEecccceEEEEEEec---CCcCEEccCCCcccEEecCCCceEEEEEE-EeCC
Confidence 4677874 56778899988766665422 1222355554322 227888999999988 4434
No 163
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=23.40 E-value=2.8e+02 Score=22.55 Aligned_cols=30 Identities=7% Similarity=0.082 Sum_probs=20.9
Q ss_pred CceEEEecCCEEEEEEEeCCCCCeeEEecc
Q 039250 63 GPVVYAQEDDRIIVKVTNQSPYNATIHWHG 92 (571)
Q Consensus 63 gP~i~v~~Gd~v~v~v~N~l~~~~~iH~HG 92 (571)
|-+|.++.||++.|.|.=+.....+-...+
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~ 41 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYTWLRSG 41 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEec
Confidence 446999999999999886655444444443
No 164
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=23.37 E-value=2.1e+02 Score=28.12 Aligned_cols=69 Identities=22% Similarity=0.262 Sum_probs=42.3
Q ss_pred CEEEEEEeecCccceEEEE---Ec---CceeEEEEeCCCCC----------CeeEeceEEeCCCceEEEEEEeCC-----
Q 039250 225 KTYLLRLINAGLNMENFFA---IA---NHKLTIVEADAEYT----------KPFSTDRVMLGPGQTVNVLVTADQ----- 283 (571)
Q Consensus 225 ~~~rlRliNa~~~~~~~~~---i~---gh~~~via~DG~~~----------~P~~~d~l~l~pgeR~dv~v~~~~----- 283 (571)
-++..-|-|.|....--|+ ++ -..|.| ..||..+ .|-..+-+.|.|||.+++.++...
T Consensus 38 ~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 38 VRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp CEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred eEEEEEEEeCCCCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 3455556666643321111 12 234555 4677544 122357899999999999999875
Q ss_pred CCceeEEEeec
Q 039250 284 PIGKYSMAMGP 294 (571)
Q Consensus 284 ~~g~~~i~~~~ 294 (571)
.+|.|.++...
T Consensus 117 ~gG~y~v~~~g 127 (343)
T 2x3c_A 117 AQGQYSIRYQL 127 (343)
T ss_dssp SCEEEEEEEC-
T ss_pred CCceEEEEEee
Confidence 36899998865
No 165
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=23.23 E-value=1.6e+02 Score=24.28 Aligned_cols=59 Identities=19% Similarity=0.249 Sum_probs=36.6
Q ss_pred eEEEecC-CEEEEEEEeCCCCCeeE--EecccccCCCCCCCC---------CCccccCcCCCCCeEEEEEE
Q 039250 65 VVYAQED-DRIIVKVTNQSPYNATI--HWHGVRQRLSCWFDG---------PAYITQCPIQSGQTFTYEFT 123 (571)
Q Consensus 65 ~i~v~~G-d~v~v~v~N~l~~~~~i--H~HG~~~~~~~~~DG---------~~~~~q~~i~PG~~~~y~~~ 123 (571)
.|++++| ++++++|.|..++|.-+ |+|=....+.--.|= .|.-|..-..||++.+-+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 4777887 58999999998887664 666555443322231 22333345667777665553
No 166
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=23.23 E-value=1.6e+02 Score=24.28 Aligned_cols=59 Identities=19% Similarity=0.249 Sum_probs=36.6
Q ss_pred eEEEecC-CEEEEEEEeCCCCCeeE--EecccccCCCCCCCC---------CCccccCcCCCCCeEEEEEE
Q 039250 65 VVYAQED-DRIIVKVTNQSPYNATI--HWHGVRQRLSCWFDG---------PAYITQCPIQSGQTFTYEFT 123 (571)
Q Consensus 65 ~i~v~~G-d~v~v~v~N~l~~~~~i--H~HG~~~~~~~~~DG---------~~~~~q~~i~PG~~~~y~~~ 123 (571)
.|++++| ++++++|.|..++|.-+ |+|=....+.--.|= .|.-|..-..||++.+-+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 4777887 58999999998887664 666555443322231 22333345667777665553
No 167
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=23.10 E-value=62 Score=26.88 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=29.2
Q ss_pred EEEEEEeecCccceEEEEEcCceeEEEEeCCCCCC----eeEeceEEeCCCceEEE
Q 039250 226 TYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK----PFSTDRVMLGPGQTVNV 277 (571)
Q Consensus 226 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----P~~~d~l~l~pgeR~dv 277 (571)
.|++||-|.+... ..|-...+.+.+.||..-+ .+....=.|.|||.+.-
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 83 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTY 83 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEE
Confidence 4789999998643 4555666777666664220 11122346788876543
No 168
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=22.88 E-value=72 Score=26.55 Aligned_cols=49 Identities=18% Similarity=0.334 Sum_probs=28.2
Q ss_pred EEEEEEeecCccceEEEEEcCceeEEEEeCCCCC----CeeEeceEEeCCCceEEE
Q 039250 226 TYLLRLINAGLNMENFFAIANHKLTIVEADAEYT----KPFSTDRVMLGPGQTVNV 277 (571)
Q Consensus 226 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~----~P~~~d~l~l~pgeR~dv 277 (571)
.|++||-|.+... ..|-...+.+.+.||..- ..+....=.|.|||.+.-
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 84 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHY 84 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEE
Confidence 3789999998643 355556666666665422 111122335788886543
No 169
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=22.54 E-value=2.5e+02 Score=21.56 Aligned_cols=69 Identities=13% Similarity=0.151 Sum_probs=36.8
Q ss_pred EEeCCCEEEEEEeecCccceEEEEEcCc--eeEEEEeCCCCCCeeEeceEEeCCCceEEEEEEeCC--CCceeEEEeec
Q 039250 220 EVVPGKTYLLRLINAGLNMENFFAIANH--KLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQ--PIGKYSMAMGP 294 (571)
Q Consensus 220 ~v~~G~~~rlRliNa~~~~~~~~~i~gh--~~~via~DG~~~~P~~~d~l~l~pgeR~dv~v~~~~--~~g~~~i~~~~ 294 (571)
--++|+++++|++-....... ..+. .+++..-+|..+ ..-.........++.-+..++ ..|.|.|++..
T Consensus 12 iYrPGetV~~~~~~~~~~~~p---~~~~~~~v~l~dp~g~~v---~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDENFHP---LNELIPLVYIQDPKGNRI---AQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGGGCB---CCCEEEEEEEECTTSCEE---EEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCCCcC---CCCCceEEEEECCCCCEE---EEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 468899999998755322110 1111 345555555422 111222233445666666654 35899998864
No 170
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=22.40 E-value=42 Score=28.02 Aligned_cols=24 Identities=17% Similarity=0.048 Sum_probs=19.3
Q ss_pred eEEEEeCCCEEEEEEeecCccceE
Q 039250 217 YKIEVVPGKTYLLRLINAGLNMEN 240 (571)
Q Consensus 217 p~l~v~~G~~~rlRliNa~~~~~~ 240 (571)
-.|+|+.||++||.+.|-+....+
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEEE
Confidence 349999999999999998854443
No 171
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=20.86 E-value=66 Score=27.05 Aligned_cols=48 Identities=15% Similarity=0.307 Sum_probs=28.3
Q ss_pred EEEEEEeecCccceEEEEEcCceeEEEEeCCCCCC----eeEeceEEeCCCceEE
Q 039250 226 TYLLRLINAGLNMENFFAIANHKLTIVEADAEYTK----PFSTDRVMLGPGQTVN 276 (571)
Q Consensus 226 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----P~~~d~l~l~pgeR~d 276 (571)
.|++||-|.+... ..|-...+.+.+.||..-+ .+....=.|.|||.+.
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~ 82 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQ 82 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceE
Confidence 4789999998643 4555666666666664220 1112233677777554
No 172
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=20.15 E-value=2.4e+02 Score=27.73 Aligned_cols=15 Identities=20% Similarity=0.352 Sum_probs=13.3
Q ss_pred CcCCCCCeEEEEEEe
Q 039250 110 CPIQSGQTFTYEFTM 124 (571)
Q Consensus 110 ~~i~PG~~~~y~~~~ 124 (571)
..|+||++.+.+|.+
T Consensus 95 ~~L~pG~Sve~~~dl 109 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEV 109 (343)
T ss_dssp EEECTTCEEEEEEEC
T ss_pred EEeCCCCeEEEEEeh
Confidence 458999999999998
Done!