Citrus Sinensis ID: 039250

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-
MASFTTSLMLWLCLLFCVHTVHVMATWPRGRSTRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGELETLPHPPADFPRC
cccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEEEccccccCEEEEEcccccccEEEEECccEEEEEEEEcccccEEEEEcccccccccccccccccccccccccccEEEEEEEccccccEEcccccccccccccEEEEEcccccccccccccccEEEEEEEccccccHHHHHHHHHHccccccccccEECccccccccccccccCEEEEECcccEEEEEEEEEcccccEEEEEcccEEEEEEEcccccccEEEcEEEEccccEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEcccccccccccccccccccHHHHHHHcccccccccccccccccccEEEEEEEccccccccccccccccccccEEEEEEcCEEECcccccHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEECccccccccccEEccccccEEEECcccccccccccccccccccccEEEEccccEEEEEEEcccccccHHHHccHHHHHcccEEEEEEEccccccccccccccccccc
****TTSLMLWLCLLFCVHTVHVMATWPRGRSTRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNG******LPHPPADFPRC
xxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASFTTSLMLWLCLLFCVHTVHVMATWPRGRSTRFYEFKIQATRVNKLCNAKDIVTVNNMFPGPVVYAQEDDRIIVKVTNQSPYNATIHWHGVRQRLSCWFDGPAYITQCPIQSGQTFTYEFTMFQQKGTFFWHAHVSWLRGTVYGAIVVYPKTGVPYPFQFPYQEHIIILGEYWLQDVVQLERQVLASGGAPPPSNAYTINGHPGPNYNCSANDVYKIEVVPGKTYLLRLINAGLNMENFFAIANHKLTIVEADAEYTKPFSTDRVMLGPGQTVNVLVTADQPIGKYSMAMGPYMSAQGVSFQNISAIAYFQYLGAQPNSLALPATLPRFNDNLAVKTVMDGLRSLNPVPVPKEIDANLFVTIGLNVQKCRSGNPQQNCRGLNNGVMAASMNNISFIKPNVSVLEAYYKKIDGIFTEDFPEAPLKFYDFVNGAPNNIPNDTNSMNGTRTKVLEFGTRVQIILQDTATVTTENHPIHLHGYNFYVVGYGTGNYDPQTANFNLIDPPYMNTIGVPVGGWAAIRFTADNPGVWFMHCHFDIHQSWGLGTVLIVKNGKGELETLPHPPADFPRC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Laccase-6 Lignin degradation and detoxification of lignin-derived products.probableQ9ZPY2
Laccase-4 Lignin degradation and detoxification of lignin-derived products.probableQ5N9X2
Laccase-22 Lignin degradation and detoxification of lignin-derived products.probableQ0IQU1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.10.-.-Acting on diphenols and related substances as donors.probable
1.10.3.-With oxygen as acceptor.probable
1.10.3.2Laccase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2J5W, chain A
Confidence level:very confident
Coverage over the Query: 32-368,380-398,413-426,441-556
View the alignment between query and template
View the model in PyMOL
Template: 2XU9, chain A
Confidence level:very confident
Coverage over the Query: 30-206,217-331,344-367,385-401,449-552
View the alignment between query and template
View the model in PyMOL
Template: 2Q9O, chain A
Confidence level:very confident
Coverage over the Query: 26-367,384-420,445-554
View the alignment between query and template
View the model in PyMOL
Template: 1AOZ, chain A
Confidence level:very confident
Coverage over the Query: 32-369,385-571
View the alignment between query and template
View the model in PyMOL