BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039252
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 93/138 (67%), Gaps = 10/138 (7%)
Query: 1 MASSSSSINMIPHTKYDVFLSFRGKDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISP 60
MASSSS+ +YDVF SFRG+DVR+NF+SHL K IVTF DD + R I
Sbjct: 1 MASSSSN-----SWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGH 55
Query: 61 SLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQT 120
L +AI SKIS+V+FS+ YASS WCL+EL++I++ K + G V+PVFY VDPSD+R QT
Sbjct: 56 ELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQT 115
Query: 121 GTFGDSF-----SKLEER 133
G FG SF K EER
Sbjct: 116 GKFGMSFLETCCGKTEER 133
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 16 YDVFLSFRGKDVRHNFISHLNAALCRKKIVTFNDDK-LNRGDEISPSLSSAIEGSKISIV 74
YDVFLSFRG+D R F SHL L K I TF DDK L G I L AIE S+ +IV
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 75 IFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTFGDSFSKLEERF 134
+FS+ YA+SRWCLNELVKI+E K ++ Q V+P+FY VDPS VRNQ +F +F + E ++
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131
Query: 135 KE 136
K+
Sbjct: 132 KD 133
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 91/137 (66%), Gaps = 10/137 (7%)
Query: 1 MASSSSSINMIPHTKYDVFLSFRGKDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISP 60
+ASSS S +YDVF SFRG+DVR +F+SHL L R K +TF DD++ R I P
Sbjct: 3 IASSSGS------RRYDVFPSFRGEDVRDSFLSHLLKEL-RGKAITFIDDEIERSRSIGP 55
Query: 61 SLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQT 120
L SAI+ S+I+IVIFSK YASS WCLNELV+I + Q+V+P+F+ VD S+V+ QT
Sbjct: 56 ELLSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQT 115
Query: 121 GTFGDSFSKLEERFKEK 137
G FG F EE K K
Sbjct: 116 GEFGKVF---EETCKAK 129
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Query: 10 MIPHTKYDVFLSFRGKDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISPSLSSAIEGS 69
+IP T VF++FRGKD+R F+S L AL ++KI F D++ RG + SL I S
Sbjct: 17 LIP-TGPQVFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLI-SLFDTIGES 74
Query: 70 KISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTFGDSFSK 129
KI++VIFS+GY S WC++ELVKI E ++ I++P+FY +D V++ TG FGD+F
Sbjct: 75 KIALVIFSEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWD 134
Query: 130 LEERFK 135
L ++++
Sbjct: 135 LVDKYQ 140
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Query: 1 MASSSSSINMIPHTKYDVFLSFRGKDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISP 60
MASSSS + P T VF+ FRG DVR +FIS L AL I F D+ G E++
Sbjct: 1 MASSSSVVKPTP-TGPQVFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA- 58
Query: 61 SLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQT 120
+L + IE S++++VIFS + S CLNEL KI E K++ IV+P+FY V PS V+
Sbjct: 59 NLLTRIEESELALVIFSVDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFLE 118
Query: 121 GTFGDSFSKLE 131
G FGD+F LE
Sbjct: 119 GKFGDNFRALE 129
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query: 3 SSSSSINMIPHTKYDVFLSFRGKDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISPSL 62
++SSS+ P T VF++FRGKD+R+ F+S L A+ I F D G ++ +L
Sbjct: 2 AASSSVRPTP-TGPQVFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLV-NL 59
Query: 63 SSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGT 122
I+ S++++VIFSK Y SS WCL+EL +I + N+ G +P+FY + PS V G
Sbjct: 60 FVRIQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKGG 119
Query: 123 FGDSFSKLEERFK 135
FGD+F L+E++K
Sbjct: 120 FGDTFRVLKEKYK 132
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Query: 2 ASSSSSINMIPHTKYDVFLSFRGKDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISPS 61
A+SS+ + I +Y VF++FRG ++R++F+ L A+ +KI F D+ RG ++
Sbjct: 344 AASSTDDHGITLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLN-Y 402
Query: 62 LSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTG 121
L IE S++++ IFS+ Y S WCL+ELVK+ E + +VVPVFY ++ + + G
Sbjct: 403 LFRRIEESRVAVAIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMG 462
Query: 122 TFGDSFSKLEERFK 135
FGD+ LE ++
Sbjct: 463 AFGDNLRNLEWEYR 476
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 25 KDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISPSLSSAIEGSKISIVIFSKGYASSR 84
++VR++F+SHL+ AL RK + ND ++ D +S S +E +++S++I S
Sbjct: 14 EEVRYSFVSHLSKALQRKGV---NDVFIDSDDSLSNESQSMVERARVSVMILPGNRTVS- 69
Query: 85 WCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTFGDSFSKLEERFKE 136
L++LVK+L+ + Q+VVPV Y V S+ + FS + KE
Sbjct: 70 --LDKLVKVLDCQKNKDQVVVPVLYGVRSSETEWLSALDSKGFSSVHHSRKE 119
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Query: 16 YDVFLSFRGKDV-RHNFISHLNAALCRKKIVTFNDDKLNRGDEISPSLSSAIEGSKISIV 74
YDV + + D+ +FISHL A+LCR+ I + +K N D A+ ++ I+
Sbjct: 668 YDVVIRYGRADISNEDFISHLRASLCRRGISVY--EKFNEVD--------ALPKCRVLII 717
Query: 75 IFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
+ + Y S L+ ILE ++ ++V P+FY + P D
Sbjct: 718 VLTSTYVPSN-----LLNILEHQHTEDRVVYPIFYRLSPYD 753
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 27 VRHNFISHLNAALCRKKIVTFNDD-KLNRGDEISPSLSSAI-EGSKISIVIFSKGYASSR 84
V H+ +SHL+AAL R+ I F D L S + + +G+++ +V+ S
Sbjct: 28 VLHSLVSHLSAALRREGISVFVDACGLQETKFFSIKQNQPLTDGARVLVVVISDEVEFYD 87
Query: 85 WCLNELVKILESKNKYGQIVVPVFYLVD 112
+ +K+++ G +VVPVFY VD
Sbjct: 88 PWFPKFLKVIQGWQNNGHVVVPVFYGVD 115
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 25 KDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISPSLSSAIEGSKISIVIFSKGYASSR 84
+DV I+ L L K I F D++ RG + +L I+ SKIS+ IFS+ S+
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEVRGKGLK-NLFKRIQDSKISLAIFSE----SK 105
Query: 85 WCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTFGD 125
N+L+K ES ++ +P+FY VD TG D
Sbjct: 106 CDFNDLLKNNESADE----AIPIFYKVDA------TGDLAD 136
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 25 KDVRHNFISHLNAALCRKKIVTFNDDKLNRGDEISPSLSSAIEGSKISIVIFSKGYASSR 84
++VR++F+SHL+ AL R+K + ++ D + + IE + +S+++ S
Sbjct: 17 EEVRYSFVSHLSEAL-RRKGINNVVVDVDIDDLLFKESQAKIEKAGVSVMVLPGNCDPSE 75
Query: 85 WCLNELVKILE-SKNKYGQIVVPVFY 109
L++ K+LE +N Q VV V Y
Sbjct: 76 VWLDKFAKVLECQRNNKDQAVVSVLY 101
>sp|Q9JLF7|TLR5_MOUSE Toll-like receptor 5 OS=Mus musculus GN=Tlr5 PE=2 SV=1
Length = 859
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 15 KYDVFLSFRGKD---VRHNFISHLNAALC-RKKI-VTFNDDKLNRGDEISPSLSSAIEGS 69
+YD + F KD ++ + HL+A R ++ + F + G+ ++ +A+ GS
Sbjct: 693 RYDAYFCFSSKDFEWAQNALLKHLDAHYSSRNRLRLCFEERDFIPGENHISNIQAAVWGS 752
Query: 70 KISIVIFSKGYASSRWCL 87
+ ++ + S+ + WCL
Sbjct: 753 RKTVCLVSRHFLKDGWCL 770
>sp|Q6DDG2|K2013_XENLA Uncharacterized protein KIAA2013 homolog OS=Xenopus laevis PE=2
SV=1
Length = 604
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 26/125 (20%)
Query: 29 HNFISHLNAALCRKKIVTFN--DDKLNRGDEISPSLSS-------------AIEGSKISI 73
H ++ +++ ++VTF+ K G+ S SL ++E KI +
Sbjct: 180 HVYVQNIHITNPSDRVVTFDISSQKPLTGETFSTSLEKVQEKQFLLSSGRVSVEDGKIIL 239
Query: 74 VIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVRNQTGTFGDSFSKLEER 133
V+ + +SR ++ K+++ + V+ V Y +P D D+FSKL E
Sbjct: 240 VVVATKKLASRLQVS-------PKSEHDETVLSVVYASEPID----PAKLSDTFSKLREN 288
Query: 134 FKEKM 138
K++M
Sbjct: 289 AKKEM 293
>sp|Q7VMZ8|LPOA_HAEDU Penicillin-binding protein activator LpoA OS=Haemophilus ducreyi
(strain 35000HP / ATCC 700724) GN=lpoA PE=3 SV=1
Length = 583
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 39/73 (53%)
Query: 58 ISPSLSSAIEGSKISIVIFSKGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDVR 117
+S S+++ + ++ +I + YASS + +N+ + L S++K ++ V L+D + V
Sbjct: 22 LSACNSTSLFENSVTYLIKQEAYASSEFYINKAEQTLNSQDKITYQLLAVRKLIDENKVV 81
Query: 118 NQTGTFGDSFSKL 130
T D ++L
Sbjct: 82 EAQNTLNDLTTRL 94
>sp|P26712|3604L_ASFL5 Protein MGF 360-4L OS=African swine fever virus (isolate
Portugal/Lis 57/1957) GN=LIS382 PE=3 SV=1
Length = 382
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 25/109 (22%)
Query: 33 SHLNAALCRKKIVTFNDDKLNRGDEISPSLSSAIEGSKISIVIFSKGYASSRWCLNELVK 92
+ L+ AL +++++FN +NR +IS IEGS +S V F G ++ + K
Sbjct: 266 ADLDRAL--ERLISFNS--INR--KISGETRLCIEGSYLSNVYFCIGLGANPYT----KK 315
Query: 93 ILES-KNKYGQIVVPVF--------------YLVDPSDVRNQTGTFGDS 126
I E+ K K+ I++ +F ++DPSDVR T+ ++
Sbjct: 316 IQETIKQKHSNIMILLFSKKKILSPHSVLQNKILDPSDVRKMISTYENT 364
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,180,810
Number of Sequences: 539616
Number of extensions: 1890683
Number of successful extensions: 3960
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3939
Number of HSP's gapped (non-prelim): 24
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)