BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039253
(199 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 250 bits (638), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 157/220 (71%), Gaps = 25/220 (11%)
Query: 4 SIVIQRGSG---AGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI QRGS AGGAADR+ NQLLTEMDG++AKKT+F+IG TNRPDIIDPALLRPGRLD
Sbjct: 585 SIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLD 644
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
QLIYIPLP E SR QIFKACLRKSP+SKD+DL LA+ TQGFSGAD+TEICQRACK A R
Sbjct: 645 QLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIR 704
Query: 121 EEIENDIRRRKGKQ--PEAIE---DEVAEIKAEHFEESMKYACKS--------------- 160
E IE DI R K +Q P++++ DEV EIK HFEESMKYA +S
Sbjct: 705 ENIEKDIEREKRRQENPDSMDEDVDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQT 764
Query: 161 --QSRGFGDEFGFCETAVAANNLIPVSSITDGNGEDDNVY 198
QSRGFG EF F +T+ A + ++ +DD++Y
Sbjct: 765 LQQSRGFGTEFRFADTSGGATAAADPFATSNAAADDDDLY 804
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G RI +QLLT MDGL ++ + V+G TNRP+ IDPAL R GR D+ I
Sbjct: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 371
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P E RL++ + ++++VDLE++++ T G+ GAD+ +C A RE++
Sbjct: 372 DIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKM 431
Query: 124 E 124
+
Sbjct: 432 D 432
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 247 bits (630), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 158/222 (71%), Gaps = 27/222 (12%)
Query: 4 SIVIQRGSG---AGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI QRGS AGGAADR+ NQLLTEMDG+SAKKT+F+IG TNRPDIIDPALLRPGRLD
Sbjct: 585 SIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLD 644
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
QLIYIPLP E SR QIFKACLRKSP++K+VDL LA+ TQGFSGADITEICQRACK A R
Sbjct: 645 QLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIR 704
Query: 121 EEIENDI-RRRKGKQ-PEA-----IEDEVAEIKAEHFEESMKYACKS------------- 160
E IE DI R RK ++ PEA ++DEVAEIKA HFEESMK+A +S
Sbjct: 705 ENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFA 764
Query: 161 ----QSRGFGDEFGFCETAVAANNLIPVSSITDGNGEDDNVY 198
QSRGFG EF F E+ + + G ++D++Y
Sbjct: 765 QTLQQSRGFGSEFRFPESGDRTTTGSDPFAASAGGADEDDLY 806
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G RI +QLLT MDGL ++ + VIG TNRP+ IDPAL R GR D+ I
Sbjct: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P E RL++ + + +S DVDLE++A+ T G+ GAD+ +C A RE++
Sbjct: 372 DIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
Query: 124 EN-DIRRRKGKQPEAIEDEVAE---IKAEHFEESMKYACKSQSR 163
+ D+ + E I+ EV + EHF+ ++ + S R
Sbjct: 432 DVIDL------EDETIDAEVLNSMAVTNEHFQTALGTSNPSALR 469
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 246 bits (628), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 148/199 (74%), Gaps = 27/199 (13%)
Query: 4 SIVIQRGSGAG---GAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI QRG+ AG GAADR+ NQLLTEMDG++AKKT+F+IG TNRPDIID ALLRPGRLD
Sbjct: 584 SIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLD 643
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
QLIYIPLP E SRL IFKACLRKSPV+KDVD+ LA++TQGFSGADITEICQRACK A R
Sbjct: 644 QLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703
Query: 121 EEIENDI--RRRKGKQPEAIE-----DEVAEIKAEHFEESMKYACKS------------- 160
E IE DI RR+ + PEA+E DEV+EI+A HFEESMKYA +S
Sbjct: 704 ENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFA 763
Query: 161 ----QSRGFGDEFGFCETA 175
QSRGFG EF F TA
Sbjct: 764 QTLQQSRGFGSEFRFDSTA 782
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 75/121 (61%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G RI +QLLT MDGL ++ + V+G TNRP+ IDPAL R GR D+ I
Sbjct: 311 SIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 370
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P E RL++ + + +++DVDLE++++ T G+ GAD+ +C A RE++
Sbjct: 371 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 124 E 124
+
Sbjct: 431 D 431
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/230 (58%), Positives = 158/230 (68%), Gaps = 35/230 (15%)
Query: 4 SIVIQRGSG---AGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI QRG+ AGGAADR+ NQLLTEMDG++AKKT+F+IG TNRPDIIDPALLRPGRLD
Sbjct: 585 SIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLD 644
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
QLIYIPLP E+SR QIFK+CLRKSPV+KDVDL LA++TQGFSGADITEICQR+CK A R
Sbjct: 645 QLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704
Query: 121 EEIENDI--RRRKGKQP---EAIEDEVAEIKAEHFEESMKYACKS--------------- 160
E IE DI R++ + P E E+E+AEIKA HFEESMKYA +S
Sbjct: 705 ENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRKYQAFAQT 764
Query: 161 --QSRGFGDEFGFCETAVAANNLIPVSSIT----------DGNGEDDNVY 198
QSRGFG EF F + P ++ T G +DD++Y
Sbjct: 765 LQQSRGFGSEFRFPDAPTGTTGAFPGAAATVGGVDPFATSGGAADDDDLY 814
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 75/121 (61%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G RI +QLLT MDGL ++ + V+G TNRP+ IDPAL R GR D+ I
Sbjct: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 371
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P E RL++ + + +++DVDLE++++ T G+ GAD+ +C A RE++
Sbjct: 372 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKM 431
Query: 124 E 124
+
Sbjct: 432 D 432
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 224 bits (571), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 135/180 (75%), Gaps = 23/180 (12%)
Query: 19 RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQIFK 78
R+ NQLLTEMDG++AKKT+F+IG TNRPDIID ALLRPGRLDQLIYIPLP E SRL IFK
Sbjct: 603 RVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFK 662
Query: 79 ACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDI--RRRKGKQPE 136
A LRKSP++KDVD+ LA++TQGFSGADITEICQRACK A RE IE DI +R+ + PE
Sbjct: 663 AALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPE 722
Query: 137 AIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFGDEFGFCETA 175
A+E DEV+EIKA HFEESMKYA +S QSRGFG EF F +A
Sbjct: 723 AMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFENSA 782
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 75/121 (61%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G RI +QLLT MDGL ++ + V+G TNRP+ IDPAL R GR D+ I
Sbjct: 311 SIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREI 370
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P E RL++ + + +++DVDLE++++ T G+ GAD+ +C A RE++
Sbjct: 371 DIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKM 430
Query: 124 E 124
+
Sbjct: 431 D 431
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 213 bits (543), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 151/223 (67%), Gaps = 33/223 (14%)
Query: 4 SIVIQRGSG---AGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI RG AGGAADR+ NQ+LTEMDG+ AKK +F+IG TNRPDIIDPA+LRPGRLD
Sbjct: 578 SIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLD 637
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
QLIYIPLP +KSR I KA LRKSP++K+VDL +A+ TQGFSGAD+TEICQRACK A R
Sbjct: 638 QLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIR 697
Query: 121 EEIENDIRRRKGK---QPEAI----EDEVAEIKAEHFEESMKYACKS------------- 160
+ IE +IRR K + Q A+ +D V EI + HFEE+MK+A +S
Sbjct: 698 QAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFA 757
Query: 161 ----QSRGFGDEFGF----CETAVAANNLIPVSSITDGNGEDD 195
QSRGFG F F T+ + NNL PV+S D NG+DD
Sbjct: 758 QTLQQSRGFGQNFRFPGQTGNTSGSGNNL-PVNSPGD-NGDDD 798
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDG+ + V+ TNRP+ IDPAL R GR D+ I
Sbjct: 305 AIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREI 364
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL++ + + + DVDLE++A + G GAD+ +C A RE++
Sbjct: 365 DIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKM 424
Query: 124 E 124
+
Sbjct: 425 D 425
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 213 bits (542), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 141/205 (68%), Gaps = 30/205 (14%)
Query: 4 SIVIQRGSG---AGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI RG AGGAADR+ NQ+LTEMDG++AKK +F+IG TNRPDIIDPA+LRPGRLD
Sbjct: 586 SIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLD 645
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
QLIYIPLP E SRLQIFKA LRK+P+S D+DL LA+ T GFSGAD+TEICQRACK A R
Sbjct: 646 QLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIR 705
Query: 121 EEIENDIRRRKGKQ------PEAIEDEVA----EIKAEHFEESMKYACKS---------- 160
E IE +IR+ K +Q E +EDE+A EI HFEE+MK+A +S
Sbjct: 706 ESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIRKYE 765
Query: 161 -------QSRGFGDEFGFCETAVAA 178
QSRGFG+ F F A +A
Sbjct: 766 MFAQTLQQSRGFGNNFKFPGEAPSA 790
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 68/121 (56%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + VI TNRP+ ID AL R GR D+ I
Sbjct: 313 AIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREI 372
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + + +DVDLE++A GF GAD+ +C A RE++
Sbjct: 373 DIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKM 432
Query: 124 E 124
E
Sbjct: 433 E 433
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 130/174 (74%), Gaps = 23/174 (13%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
AADR+ NQ+LTEMDG+S KK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP EKSR+
Sbjct: 596 AADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMA 655
Query: 76 IFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ- 134
I KA LRKSPV+KDVD++ LA+ T GFSGAD+TEICQRACK A RE IEN+IRR + +Q
Sbjct: 656 ILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQT 715
Query: 135 -PEAIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFG 166
P A+E D V EI+ +HFEE+M++A +S QSRGFG
Sbjct: 716 NPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG 769
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 308 AIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + +S DVDLE++A T G GAD+ +C A A R+++
Sbjct: 368 DIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 124 E 124
+
Sbjct: 428 D 428
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 196 bits (499), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 127/182 (69%), Gaps = 27/182 (14%)
Query: 17 ADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQI 76
+DR+ NQ+LTEMDG++AKK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP E SR QI
Sbjct: 604 SDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQI 663
Query: 77 FKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ-- 134
KA LRK+P+SKD+DL LA+ T GFSGAD+TEICQRACK A RE IE +IR K +Q
Sbjct: 664 LKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDR 723
Query: 135 ----PEAIEDE----VAEIKAEHFEESMKYACKS-----------------QSRGFGDEF 169
E +ED+ V EI HFEE+MK+A +S QSRGFG+ F
Sbjct: 724 QARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNF 783
Query: 170 GF 171
F
Sbjct: 784 KF 785
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 68/121 (56%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDG+ + + VI TNRP+ ID AL R GR D+ I
Sbjct: 314 AIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREI 373
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + ++ DVDLE++A GF GAD+ +C A RE++
Sbjct: 374 DIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKM 433
Query: 124 E 124
E
Sbjct: 434 E 434
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 194 bits (492), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 131/174 (75%), Gaps = 23/174 (13%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
AADR+ NQ+LTEMDG+S+KK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP EKSR+
Sbjct: 596 AADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIA 655
Query: 76 IFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ- 134
I KA LRKSP+SKDVDL+ LA+ T GFSGAD+TEICQRACK A RE IEN+IRR + +Q
Sbjct: 656 ILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQT 715
Query: 135 -PEAIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFG 166
P A+E D V EI+ +HFEE+M++A +S QSRGFG
Sbjct: 716 NPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG 769
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 308 AIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + ++ DVDLE++A T G GAD+ +C A A R+++
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 124 E 124
+
Sbjct: 428 D 428
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 130/174 (74%), Gaps = 23/174 (13%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
AADR+ NQ+LTEMDG+S KK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP EKSR+
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIA 655
Query: 76 IFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ- 134
I KA LRKSPV+KDVDL+ LA+ T GFSGAD+TEICQRACK A RE IEN+IRR + +Q
Sbjct: 656 ILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQT 715
Query: 135 -PEAIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFG 166
P A+E D V EI+ +HFEE+M++A +S QSRGFG
Sbjct: 716 NPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG 769
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 308 AIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + +S DVDLE++A T G GAD+ +C A A R+++
Sbjct: 368 DIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 124 E 124
+
Sbjct: 428 D 428
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 130/174 (74%), Gaps = 23/174 (13%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
AADR+ NQ+LTEMDG+S KK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP EKSR+
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 76 IFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ- 134
I KA LRKSPV+KDVDLE LA+ T GFSGAD+TEICQRACK A RE IE++IRR + +Q
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Query: 135 -PEAIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFG 166
P A+E D V EI+ +HFEE+M++A +S QSRGFG
Sbjct: 716 NPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG 769
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 308 AIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + ++ DVDLE++A T G GAD+ +C A A R+++
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 124 E 124
+
Sbjct: 428 D 428
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 130/174 (74%), Gaps = 23/174 (13%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
AADR+ NQ+LTEMDG+S KK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP EKSR+
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 76 IFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ- 134
I KA LRKSPV+KDVDLE LA+ T GFSGAD+TEICQRACK A RE IE++IRR + +Q
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Query: 135 -PEAIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFG 166
P A+E D V EI+ +HFEE+M++A +S QSRGFG
Sbjct: 716 NPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG 769
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 308 AIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + ++ DVDLE++A T G GAD+ +C A A R+++
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 124 E 124
+
Sbjct: 428 D 428
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 130/174 (74%), Gaps = 23/174 (13%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
AADR+ NQ+LTEMDG+S KK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP EKSR+
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 76 IFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ- 134
I KA LRKSPV+KDVDLE LA+ T GFSGAD+TEICQRACK A RE IE++IRR + +Q
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Query: 135 -PEAIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFG 166
P A+E D V EI+ +HFEE+M++A +S QSRGFG
Sbjct: 716 NPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG 769
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 308 AIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + ++ DVDLE++A T G GAD+ +C A A R+++
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 124 E 124
+
Sbjct: 428 D 428
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 130/174 (74%), Gaps = 23/174 (13%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
AADR+ NQ+LTEMDG+S KK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP EKSR+
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 76 IFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ- 134
I KA LRKSPV+KDVDLE LA+ T GFSGAD+TEICQRACK A RE IE++IRR + +Q
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Query: 135 -PEAIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFG 166
P A+E D V EI+ +HFEE+M++A +S QSRGFG
Sbjct: 716 NPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG 769
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 308 AIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + ++ DVDLE++A T G GAD+ +C A A R+++
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 124 E 124
+
Sbjct: 428 D 428
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 130/174 (74%), Gaps = 23/174 (13%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
AADR+ NQ+LTEMDG+S KK +F+IG TNRPDIIDPA+LRPGRLDQLIYIPLP EKSR+
Sbjct: 596 AADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVA 655
Query: 76 IFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ- 134
I KA LRKSPV+KDVDLE LA+ T GFSGAD+TEICQRACK A RE IE++IRR + +Q
Sbjct: 656 ILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT 715
Query: 135 -PEAIE----DEVAEIKAEHFEESMKYACKS-----------------QSRGFG 166
P A+E D V EI+ +HFEE+M++A +S QSRGFG
Sbjct: 716 NPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG 769
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G RI +QLLT MDGL + + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 308 AIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 367
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + ++ DVDLE++A T G GAD+ +C A A R+++
Sbjct: 368 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 427
Query: 124 E 124
+
Sbjct: 428 D 428
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 170 bits (431), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 115/152 (75%), Gaps = 1/152 (0%)
Query: 12 GAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEK 71
G+ GA DR+ NQLL+EMDG++ KK +FVIG TNRPD +D AL+RPGRLDQL+YIPLP
Sbjct: 595 GSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLD 654
Query: 72 SRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDI-RRR 130
SR+ I +A L+K+P+S ++DL +LA+ T FSGAD++EICQRACK A RE IE ++ +++
Sbjct: 655 SRVSILQATLKKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKLAIRETIEYELEQKK 714
Query: 131 KGKQPEAIEDEVAEIKAEHFEESMKYACKSQS 162
KG + +ED V ++ +H +S+K A +S S
Sbjct: 715 KGSEMMDLEDPVPYLRPDHLVQSLKTARRSVS 746
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%)
Query: 8 QRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPL 67
+R G RI +QLLT MDG+ A+ + V+G TNRP+ IDPAL R GR D+ I I +
Sbjct: 316 KREKSQGEVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGV 375
Query: 68 PVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
P E RL+I + + +S+DVDL + + GF+G+D+ +C A RE++
Sbjct: 376 PDETGRLEILRIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKL 431
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 115/172 (66%), Gaps = 13/172 (7%)
Query: 4 SIVIQRGSG---AGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI RG AGGA+DR+ NQLLTEMDG+++KK +FVIG TNRP+ +D AL+RPGRLD
Sbjct: 603 SIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLD 662
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
L+Y+PLP + SR I KA LRK+PV+ DVD+E +A T GFSGAD+ + QRA K A +
Sbjct: 663 TLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIK 722
Query: 121 EEIENDIRRRKGKQP----------EAIEDEVAEIKAEHFEESMKYACKSQS 162
E I +I R+K ++ E ED V E+ HFEE+MK A +S S
Sbjct: 723 ESISAEIERQKQREAAGEDVKMEDEEEGEDPVPELTRAHFEEAMKTARRSVS 774
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 69/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G R+ +QLLT MDG+ A+ + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 329 SIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREV 388
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL+I + + +DVDLE +A T G+ G+D+ +C A RE++
Sbjct: 389 DIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKM 448
Query: 124 E 124
+
Sbjct: 449 D 449
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 113/182 (62%), Gaps = 25/182 (13%)
Query: 4 SIVIQRGSG---AGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI RG AGGA+DR+ NQLLTEMDG++AKK +FVIG TNRPD IDPA+LRPGRLD
Sbjct: 591 SIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLD 650
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
QLIY+PLP E +RL I A LRK+P+ ++L +A+ TQGFSGAD+ I QRA K A +
Sbjct: 651 QLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIK 710
Query: 121 EEIE--------------------NDIRRRKGKQPEAIEDEVAEIKAEHFEESMKYACKS 160
+ IE D + ++PE D V I EHF E+MK A +S
Sbjct: 711 DSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEV--DPVPYITKEHFAEAMKTAKRS 768
Query: 161 QS 162
S
Sbjct: 769 VS 770
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G R+ +QLLT MDG+ A+ + VI TNRP+ IDPAL R GR D+ +
Sbjct: 318 SIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREV 377
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P RL++ + + ++ DVDLE LA T G+ GADI +C A RE++
Sbjct: 378 DIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKM 437
Query: 124 E 124
+
Sbjct: 438 D 438
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 110/151 (72%), Gaps = 7/151 (4%)
Query: 19 RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQIFK 78
R+ NQLLTEMDG+++KK +FVIG TNRPD IDPAL+RPGRLDQLIY+PLP E++R I +
Sbjct: 618 RVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQ 677
Query: 79 ACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRK--GKQP- 135
LR +PV++DVDL +A+ T GFSGAD+ + QRA K A ++ IE DI+R G+ P
Sbjct: 678 TQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPA 737
Query: 136 -EAIEDE---VAEIKAEHFEESMKYACKSQS 162
+ + DE V++++ H EE+MK A +S S
Sbjct: 738 DDVVMDEDASVSQVQRHHVEEAMKMARRSVS 768
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 71/121 (58%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G R+ +QLLT MDG+ A+ + V+ TNRP+ IDPAL R GR D+ +
Sbjct: 328 SIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREV 387
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
+ +P RL+I + + ++ DVDLE++A T G+ G+D+ +C A RE++
Sbjct: 388 DVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKM 447
Query: 124 E 124
+
Sbjct: 448 D 448
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate
3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 148 bits (373), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/168 (47%), Positives = 110/168 (65%), Gaps = 14/168 (8%)
Query: 4 SIVIQRGSGAGG-AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQL 62
S+ +R S A+DR+ NQ+LTE+DG++ KKTIF+I TNRPDI+D AL RPGRLD+L
Sbjct: 1038 SLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKL 1097
Query: 63 IYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREE 122
IYI LP KSR IFKA L+ +P+++DVD+ +A+ T+GFSGADIT +CQ A +A +E
Sbjct: 1098 IYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKET 1157
Query: 123 I--------ENDIRRRKGKQPEAIEDE-----VAEIKAEHFEESMKYA 157
I E + +R+K K I+D V + +HF+ + K A
Sbjct: 1158 IHLLNIRKKEQEEQRKKNKNSFKIDDTDTYDPVPTLSKKHFDLAFKNA 1205
Score = 91.7 bits (226), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R R+ +QLLT MDGL + V+ TNRP+ IDPAL R GR D+ I
Sbjct: 631 SIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREI 690
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
IP+P E+ R +I +K + DV+L K+A+ G+ GAD+ ++C A +E I
Sbjct: 691 EIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHI 750
Query: 124 ENDIRRRKGKQPEAIEDEVAEIKAEHFEESMKYACKSQSRGFGDE 168
++ E F E MK + + G+E
Sbjct: 751 -----------------HFLDLDEEDFIEFMKISVDEDKKNMGNE 778
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%), Gaps = 4/154 (2%)
Query: 10 GSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPV 69
G G +R+ +QLLTE+DGL K + VI TNRPD+IDPALLRPGRL++ IYIP P
Sbjct: 566 GIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPD 625
Query: 70 EKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRR 129
+K+R++IFK LR P++ DV++E+LA+ T+G+SGADI +C+ A A RE I+ + R
Sbjct: 626 KKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTR 685
Query: 130 RKGKQPEAIEDEVAEIKAEHFEESMKYACKSQSR 163
+ K+ + +I +HFEE++K S ++
Sbjct: 686 EEAKE----AAKKLKITKKHFEEALKKVRPSLTK 715
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G R+ QLL MDGL A+ + VI TNRPD IDPAL RPGR D+ I
Sbjct: 286 SIAPKREEVTGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREI 345
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I +P ++ R +I + RK P+++DVDLE+LA+ T GF GAD+ +C+ A A R +
Sbjct: 346 EIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVL 405
Query: 124 -ENDIRRRKGKQPEAIEDEVAE---IKAEHFEESMKYACKSQSR 163
E DI + E I EV E + E F E++K S R
Sbjct: 406 PEIDI------EAEEIPAEVIENLKVTREDFMEALKNIEPSAMR 443
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Query: 4 SIVIQRGSGAGGAA-DRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQL 62
+I +RG A D++ NQLLTE+DG+ K + VI TNRPDIIDPALLRPGRLD++
Sbjct: 556 AIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRV 615
Query: 63 IYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREE 122
I +P+P EK+RL IFK R +++DV+LE+LA+ T+G++GADI +C+ A A RE
Sbjct: 616 ILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRES 675
Query: 123 I 123
I
Sbjct: 676 I 676
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 70/117 (59%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G R+ QLLT MDGL + + VIG TNRP+ +DPAL RPGR D+ I
Sbjct: 283 AIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREI 342
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
I +P + R +I + R P+++DVDL+ LA T GF GAD+ +C+ A A R
Sbjct: 343 VIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALR 399
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Query: 4 SIVIQRGSGA-GGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQL 62
SI +RG+ + G +RI NQLLT +DG+ + VIG TNRPDI+DPALLR GR D+L
Sbjct: 571 SIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKL 630
Query: 63 IYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATRE 121
IYIP P +++RL I K + P++ DVDL +AQ T+G+ GAD+ +C+ A +A RE
Sbjct: 631 IYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRE 689
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +R G R+ QLLT MDG+ + + VIG TNR D IDPAL RPGR D+ I
Sbjct: 294 SIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREI 353
Query: 64 YIPLPVEKSRLQIFKACLRKSPV-----SKDVDLEKLAQFTQGFSGADITEICQRACKDA 118
I +P R +I R P+ K+ LE++A +T GF GAD+ + + + +A
Sbjct: 354 EIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNA 413
Query: 119 TR 120
R
Sbjct: 414 LR 415
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Query: 4 SIVIQRGS--GAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQ 61
++ ++RGS GAG ADR+ QLLTEMDG+ K + ++ TNRPD ID AL+RPGR+D+
Sbjct: 731 ALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDR 790
Query: 62 LIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATRE 121
+IY+PLP +R +IFK PVS +VDL++L T +SGA+I +C+ A A E
Sbjct: 791 IIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEE 850
Query: 122 EIE-NDIRRRKGKQ 134
+I+ N I +R Q
Sbjct: 851 DIQANLIMKRHFTQ 864
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 15/143 (10%)
Query: 19 RIPNQLLTEMDGLSAKKT---IFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
R+ LLT MDG+ ++ + + V+G TNRP +D AL RPGR D+ I I +P + RL
Sbjct: 472 RVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLD 531
Query: 76 IFKACLRKSP-VSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ 134
I + LR+ P + + +L +LA G+ GAD+ +C A A +RR KQ
Sbjct: 532 ILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCA--------LRRILKKQ 583
Query: 135 PEAIEDEVA---EIKAEHFEESM 154
P + +VA +I + F ++M
Sbjct: 584 PNLPDVKVAGLVKITLKDFLQAM 606
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 98/185 (52%), Gaps = 11/185 (5%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQLL EMDG SA + I +I TNRPD++DPALLRPGR D+ I
Sbjct: 264 QRGAGYGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDRQIV 323
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIE 124
I P K RL IF+ + P+ DVDLE LA+ T GF+GADI + A A R
Sbjct: 324 IDRPDLKGRLAIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIANLMNEAALLAAR---- 379
Query: 125 NDIRRRKGKQPEAIEDEVAEIKAEHFEESMKYACKSQSRGFG-DEFGFCETAVAANNLIP 183
RR+K + +ED + + A E+ + + + R E G ++ P
Sbjct: 380 ---RRKKKISMQDVEDAIDRVLAGGPEKKSRVISEKEKRVTAYHEAGHAVVGHMLPHMDP 436
Query: 184 VSSIT 188
+ IT
Sbjct: 437 LHKIT 441
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 16/166 (9%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
++ RG +R+ NQ L E+DG ++ ++VIG TNRPD++DPA LRPGR L+
Sbjct: 632 ALTTSRGKEGAWVVERLLNQFLVELDG-GERRNVYVIGATNRPDVVDPAFLRPGRFGNLL 690
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFT-QGFSGADITEICQRACKDATREE 122
Y+PLP R I KA RK P+ VDL+ +A+ +GFSGAD+ + Q+A A E
Sbjct: 691 YVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEM 750
Query: 123 IENDIRRRKGKQPEAIEDEVAE-----IKAEHFEESMKYACKSQSR 163
I + E+ ED+V + IK HFE+++ S ++
Sbjct: 751 IGSS---------ESSEDDVTDITQCTIKTRHFEQALSLVSPSVNK 787
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 19 RIPNQLLTEMDGL----------SAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLP 68
RI QLLT MDG S+ + VIG TNRPD +DPAL R GR + I + P
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 69 VEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIR 128
E +R +I +K + D +++A+ T GF GAD+ + A + A + +++
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDS--- 468
Query: 129 RRKGKQPEAIEDEVAEIKAEHFEESMK 155
RK +Q ED+ + ++ EE ++
Sbjct: 469 -RKSEQSGDGEDDKSWLRMPWPEEELE 494
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 4 SIVIQRGS--GAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQ 61
++ ++RGS GAG ADR+ QLLTEMDG+ K + V+ TNRPD ID AL+RPGR+D+
Sbjct: 731 ALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDR 790
Query: 62 LIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATRE 121
+IY+PLP +R +I P+S +VDL++L T +SGA+I +C+ A A E
Sbjct: 791 IIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEE 850
Query: 122 EIEND-IRRRKGKQPEAI 138
I+ D I +R Q +I
Sbjct: 851 NIKADCIMKRHFTQALSI 868
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 19 RIPNQLLTEMDGLSAKKT---IFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
R+ LLT MDG+ ++ + + V+G TNRP +D AL RPGR D+ I I +P + RL
Sbjct: 472 RVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLD 531
Query: 76 IFKACLRKSP-VSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIENDIRRRKGKQ 134
I + LR+ P + +L +LA G+ GAD+ +C A A +RR KQ
Sbjct: 532 ILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHA--------LRRVLRKQ 583
Query: 135 PEAIEDEVA 143
P + +VA
Sbjct: 584 PNLPDSKVA 592
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQLL EMDG + I V+ TNRPD++DPALLRPGR D+ +
Sbjct: 270 QRGAGLGGGHDEREQTLNQLLVEMDGFEPNEGIIVMAATNRPDVLDPALLRPGRFDRQVV 329
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIE 124
+ P K R+ I K LR PV+ DVD+E LA+ T GF+GAD+ + A A
Sbjct: 330 VDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADMENLANEAAILA------ 383
Query: 125 NDIRRRKGK 133
+RRRK K
Sbjct: 384 --VRRRKNK 390
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
Query: 4 SIVIQRG-SGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQL 62
SI RG S G +RI NQLL EMDG+ + +I TNRPDI+DPALLRPGR D+L
Sbjct: 591 SIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRL 650
Query: 63 IYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
IY+P P + +R +I K + P+++DV LE +A+ +G++GAD+ + + A +A R
Sbjct: 651 IYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I +R G R+ QLLT MDG+ + + VIG TNRPD IDPAL RPGR D+ I
Sbjct: 316 AIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREI 375
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
I P K R I + R P++ DVDL+KLA+ T G++GAD+ + + A A R +
Sbjct: 376 EIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFV 435
Query: 124 ENDIRRRKGKQPEAIEDEVAEIKA 147
D ++ QP + + E+K
Sbjct: 436 --DEKKLNLDQPTIPAEIIKELKV 457
>sp|P57462|FTSH_BUCAI ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsH PE=3
SV=2
Length = 611
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQ+L EMDG + I +I TNRPD++DPALLRPGR D+ +
Sbjct: 259 QRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVI 318
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ LP + R QI K +RK P+SKDVD +A+ T GFSGAD+ + A A R
Sbjct: 319 VALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAAR 374
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2
SV=2
Length = 1130
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 76/132 (57%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +RG G DR+ NQ LTE+DG+ +FV T+RPD++DPALLRPGRLD+L+
Sbjct: 948 SIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLL 1007
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
P RL+I RK ++ D+DLE +A T+GFSGAD+ + A A E +
Sbjct: 1008 LCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYL 1067
Query: 124 ENDIRRRKGKQP 135
+ + G P
Sbjct: 1068 NREDKPETGTTP 1079
>sp|D5HA94|FTSH2_SALRM ATP-dependent zinc metalloprotease FtsH 2 OS=Salinibacter ruber
(strain M8) GN=ftsH2 PE=3 SV=1
Length = 683
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 3/121 (2%)
Query: 4 SIVIQRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLD 60
SI +RG+G GG D + NQLL+E+DG + + V+ TNRPDI+D AL RPGR D
Sbjct: 291 SIGRKRGAGLGGGNDEREQTLNQLLSELDGFEENEGVIVMAATNRPDILDSALTRPGRFD 350
Query: 61 QLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ I + LP ++SR +I K R+ P+S DVDLE++A+ T GFSGAD+ + A A R
Sbjct: 351 RQITVDLPTKQSRHEILKIHAREKPLSDDVDLEEIARSTPGFSGADLENLLNEAALLAGR 410
Query: 121 E 121
Sbjct: 411 H 411
>sp|P45219|FTSHL_HAEIN ATP-dependent zinc metalloprotease FtsH homolog OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1465 PE=3 SV=1
Length = 381
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQ+L EMDG S + VI TNRPD++DPAL RPGR D+ +
Sbjct: 4 QRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVV 63
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ LP K R QI K +RK V++DVD LA+ T G+SGAD+ + A A R
Sbjct: 64 VGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAAR 119
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%)
Query: 11 SGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVE 70
+G R QLL EMDG A+ + +IG TNRPDI+DPA+LRPGR D++I +P P E
Sbjct: 284 TGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDE 343
Query: 71 KSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATRE 121
K RL+I K RK +++DV+LE++A+ T+G GA++ IC A +A RE
Sbjct: 344 KGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRE 394
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 78/133 (58%), Gaps = 11/133 (8%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQLL EMDG S + I VI TNRPDI+DPALLRPGR D+ I
Sbjct: 268 QRGAGLGGGHDEREQTLNQLLVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDRHIT 327
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEI--------CQRACK 116
+ +P K R +I K R P++ DV L+ LA+ T GF+GAD+ + +R K
Sbjct: 328 VGIPDIKGREEILKIHSRNKPLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARRGLK 387
Query: 117 DATREEIENDIRR 129
T E+E I R
Sbjct: 388 QITMAELEEAITR 400
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQ+L EMDG + + +I TNRPD++DPALLRPGR D+ +
Sbjct: 259 QRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVI 318
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ LP + R QI K +RK P+S+DVD +A+ T GFSGAD+ + A A R
Sbjct: 319 VALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAAR 374
>sp|C8WEG0|FTSH_ZYMMN ATP-dependent zinc metalloprotease FtsH OS=Zymomonas mobilis subsp.
mobilis (strain NCIB 11163) GN=ftsH PE=3 SV=1
Length = 662
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
RG+G G D + NQLL EMDG A + I ++ TNRPD++DPALLRPGR D+ +
Sbjct: 286 HRGAGLGNGNDEREQTLNQLLVEMDGFEANEGIIILAATNRPDVLDPALLRPGRFDRQVI 345
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATRE 121
+P P + RL+I + ++K+P++ DVD+ +A+ T GFSGAD+ I A A R+
Sbjct: 346 VPRPDIEGRLKILQVHMKKTPLAPDVDVRTIARGTPGFSGADLANIVNEAALLAARK 402
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 66/100 (66%)
Query: 22 NQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQIFKACL 81
NQLL EMDG + I +I TNRPDI+DPALLRPGR D+ I+IP P K R +I K
Sbjct: 287 NQLLVEMDGFDTSEGILIIAATNRPDILDPALLRPGRFDRQIFIPKPDVKGRYEILKVHA 346
Query: 82 RKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATRE 121
+ P++KDVDLE +A+ T GF+GAD+ I A A R+
Sbjct: 347 KNKPLAKDVDLELIARATPGFTGADLENILNEAALLAARK 386
>sp|P71377|FTSH_HAEIN ATP-dependent zinc metalloprotease FtsH OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ftsH PE=3
SV=1
Length = 635
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQ+L EMDG S + VI TNRPD++DPAL RPGR D+ +
Sbjct: 258 QRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVV 317
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ LP K R QI K +RK V++DVD LA+ T G+SGAD+ + A A R
Sbjct: 318 VGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAAR 373
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQLLTEMDG I VI TNRPD++D ALLRPGR D+ +
Sbjct: 276 QRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDAALLRPGRFDRQVT 335
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEI 123
+ P + RL+I K R +S DVDLEKLA+ T GF+GAD+ + A A R +
Sbjct: 336 VDRPDFQGRLEILKVHARGKTLSADVDLEKLARRTPGFTGADLANLLNEAAILAARRNL 394
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQ+L EMDG + + VI TNRPD++DPALLRPGR D+ +
Sbjct: 304 QRGAGLGGGHDEREQTLNQILGEMDGFGGAQAVIVIAATNRPDVLDPALLRPGRFDRHVT 363
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ P K R +IFK +R P+ DVDL +LA T G +GADI + A A R
Sbjct: 364 VGRPTMKGREEIFKVHVRDVPLGDDVDLHRLAAGTVGLTGADIRNMVNEAALWAAR 419
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Query: 16 AADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQ 75
A +R+ NQLLTEMDGL + +F+I TNRPDIID A+ RPGRLD+++Y+PLP + R +
Sbjct: 685 ATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCE 744
Query: 76 IFKACLRKSPVSKDVDLEKLAQ--FTQGFSGADITEICQRACKDATREEIEND 126
I K K P+ +DVDL K+ FSGAD++ + + A A +N+
Sbjct: 745 ILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNN 797
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 34 KKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQIFKACLRKSPVSKDVDLE 93
K + VIG TNRP+ +D AL GR D+ I + +P + +R +I K K + + D E
Sbjct: 400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYE 459
Query: 94 KLAQFTQGFSGADITEICQRACKDAT 119
++A T G+ GADI + + A ++
Sbjct: 460 EIATLTPGYVGADINLLVKEAATNSV 485
>sp|P63343|FTSH_SALTY ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ftsH PE=3 SV=1
Length = 644
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQ+L EMDG + I VI TNRPD++DPALLRPGR D+ +
Sbjct: 259 QRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVV 318
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ LP + R QI K +R+ P++ D+D +A+ T GFSGAD+ + A A R
Sbjct: 319 VGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
>sp|P63344|FTSH_SALTI ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhi GN=ftsH
PE=3 SV=1
Length = 644
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQ+L EMDG + I VI TNRPD++DPALLRPGR D+ +
Sbjct: 259 QRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVV 318
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ LP + R QI K +R+ P++ D+D +A+ T GFSGAD+ + A A R
Sbjct: 319 VGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 74/115 (64%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
SI +RG G DR+ NQLLT++DG+ + ++V+ T+RPD+IDPALLRPGRLD+ +
Sbjct: 944 SIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCV 1003
Query: 64 YIPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDA 118
Y P P + SRL+I P++ DVDL+ +A T F+GAD+ + A +A
Sbjct: 1004 YCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEA 1058
>sp|Q9LET7|CI111_ARATH Calmodulin-interacting protein 111 OS=Arabidopsis thaliana
GN=CIP111 PE=1 SV=1
Length = 1022
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%)
Query: 17 ADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYIPLPVEKSRLQI 76
+DR+ +QLL E+DGL + + VI TNRPD ID ALLRPGR D+L+Y+ P E R I
Sbjct: 843 SDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAI 902
Query: 77 FKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIE 124
K LRK P S D+ L++LA T+G++GADI+ IC+ A A E +E
Sbjct: 903 LKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLE 950
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 4 SIVIQRGSGAGGAADRIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLI 63
+I R G + R+ LL MDG+S + VI TNRPD I+PAL RPGRLD+ I
Sbjct: 488 AIAPARKEGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREI 547
Query: 64 YIPLPVEKSRLQIFKACLRKSPVS-KDVDLEKLAQFTQGFSGADITEICQRACKDATREE 122
I +P R I LR S ++ +E+LA T GF GAD++ +C A R
Sbjct: 548 EIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRH 607
Query: 123 IE 124
++
Sbjct: 608 LD 609
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQLL EMDG +K I ++ TNRPDI+DPALLRPGR D+ I
Sbjct: 296 QRGAGLGGGHDEREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILDPALLRPGRFDRQIV 355
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATREEIE 124
+ P R++I K R P+ +DVD+E +A+ T GF+GAD+ + A A R E
Sbjct: 356 VDRPDLPGRIKILKVHTRGKPLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNKE 415
Query: 125 N 125
Sbjct: 416 Q 416
>sp|Q3JEE4|FTSH_NITOC ATP-dependent zinc metalloprotease FtsH OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=ftsH PE=3 SV=1
Length = 639
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 9 RGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIYI 65
RG+G GG D + NQ+L EMDG +A + + V+ TNRPD++DPALLRPGR D+ + +
Sbjct: 289 RGTGLGGGHDEREQTLNQILGEMDGFAAHENVVVLAATNRPDVLDPALLRPGRFDRKVVL 348
Query: 66 PLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATRE 121
LP +K+R ++ + + P++ DVDLE++A+ T GFSGAD+ + A RE
Sbjct: 349 DLPDKKARQRVLEVHTKNVPLAADVDLERVARRTVGFSGADLANLVNEAALLTGRE 404
>sp|P0AAI4|FTSH_SHIFL ATP-dependent zinc metalloprotease FtsH OS=Shigella flexneri
GN=ftsH PE=3 SV=1
Length = 644
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 8 QRGSGAGGAAD---RIPNQLLTEMDGLSAKKTIFVIGVTNRPDIIDPALLRPGRLDQLIY 64
QRG+G GG D + NQ+L EMDG + I VI TNRPD++DPALLRPGR D+ +
Sbjct: 259 QRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVV 318
Query: 65 IPLPVEKSRLQIFKACLRKSPVSKDVDLEKLAQFTQGFSGADITEICQRACKDATR 120
+ LP + R QI K +R+ P++ D+D +A+ T GFSGAD+ + A A R
Sbjct: 319 VGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,084,999
Number of Sequences: 539616
Number of extensions: 3150473
Number of successful extensions: 9935
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 9074
Number of HSP's gapped (non-prelim): 742
length of query: 199
length of database: 191,569,459
effective HSP length: 112
effective length of query: 87
effective length of database: 131,132,467
effective search space: 11408524629
effective search space used: 11408524629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)