Query 039257
Match_columns 210
No_of_seqs 161 out of 1795
Neff 10.2
Searched_HMMs 13730
Date Mon Mar 25 13:08:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039257.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039257hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omxa2 c.10.2.1 (A:37-235) In 99.7 2.1E-16 1.5E-20 114.4 16.3 151 48-208 44-196 (199)
2 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.8E-16 1.3E-20 119.6 13.9 151 49-206 15-193 (266)
3 d1p9ag_ c.10.2.7 (G:) von Will 99.7 3.1E-16 2.3E-20 118.4 14.9 148 48-199 59-210 (266)
4 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.2E-15 8.7E-20 111.2 15.9 144 48-201 50-194 (210)
5 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 4.2E-16 3.1E-20 112.1 11.9 119 48-169 12-136 (192)
6 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 2.2E-15 1.6E-19 109.8 14.4 138 47-193 71-209 (210)
7 d1dcea3 c.10.2.2 (A:444-567) R 99.6 1.5E-15 1.1E-19 101.5 10.4 101 91-197 1-103 (124)
8 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 2.6E-16 1.9E-20 110.2 6.9 126 61-191 13-146 (162)
9 d1dcea3 c.10.2.2 (A:444-567) R 99.6 1.2E-15 9.1E-20 101.9 9.9 116 69-189 1-122 (124)
10 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.1E-14 7.9E-19 107.2 15.1 153 48-208 45-219 (227)
11 d1xkua_ c.10.2.7 (A:) Decorin 99.6 3E-14 2.2E-18 109.2 16.3 76 46-123 12-89 (305)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 1.9E-14 1.4E-18 109.3 15.0 159 44-207 11-199 (284)
13 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.2E-14 8.4E-19 105.0 12.9 137 54-199 28-165 (199)
14 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 1.2E-14 8.9E-19 110.4 13.4 137 62-201 101-242 (284)
15 d2omza2 c.10.2.1 (A:33-416) In 99.6 2.9E-14 2.1E-18 112.1 14.7 150 50-208 225-375 (384)
16 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 3.7E-15 2.7E-19 107.1 8.2 133 68-204 10-146 (192)
17 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 7.1E-15 5.2E-19 102.7 8.9 116 78-198 8-126 (162)
18 d2omza2 c.10.2.1 (A:33-416) In 99.6 3.7E-14 2.7E-18 111.5 14.2 139 47-194 244-383 (384)
19 d1xkua_ c.10.2.7 (A:) Decorin 99.5 9.3E-14 6.7E-18 106.4 14.9 143 62-208 146-297 (305)
20 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 2.7E-13 1.9E-17 99.6 14.5 138 48-193 67-226 (227)
21 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 3.5E-14 2.6E-18 109.2 9.7 138 61-202 71-286 (313)
22 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 6.1E-13 4.5E-17 98.3 13.5 158 47-208 11-224 (242)
23 d1ogqa_ c.10.2.8 (A:) Polygala 99.4 9E-13 6.6E-17 101.1 10.4 133 66-201 50-191 (313)
24 d2ifga3 c.10.2.7 (A:36-191) Hi 99.3 8E-12 5.8E-16 86.3 11.7 99 70-169 12-113 (156)
25 d2ifga3 c.10.2.7 (A:36-191) Hi 99.3 1.4E-11 1.1E-15 85.0 12.6 107 88-198 8-117 (156)
26 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 2.5E-14 1.8E-18 103.2 -2.5 103 63-169 45-150 (198)
27 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 1.4E-14 1E-18 104.5 -4.7 108 85-198 45-154 (198)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.1 3.2E-10 2.3E-14 83.3 9.5 129 62-193 99-234 (242)
29 d2astb2 c.10.1.3 (B:2136-2419) 98.9 8.4E-10 6.1E-14 83.3 7.2 62 133-194 172-235 (284)
30 d1jl5a_ c.10.2.6 (A:) Leucine 98.9 6.6E-08 4.8E-12 74.0 16.5 133 47-196 41-174 (353)
31 d1jl5a_ c.10.2.6 (A:) Leucine 98.9 1.8E-08 1.3E-12 77.2 12.8 114 66-196 38-152 (353)
32 d2astb2 c.10.1.3 (B:2136-2419) 98.8 4.8E-09 3.5E-13 79.0 6.6 139 63-201 68-217 (284)
33 d1koha1 c.10.2.3 (A:201-362) m 98.3 3.5E-08 2.6E-12 67.9 -0.7 80 109-190 61-152 (162)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.2 2.2E-07 1.6E-11 73.3 3.3 101 67-169 3-122 (460)
35 d1koha1 c.10.2.3 (A:201-362) m 98.1 1.7E-07 1.2E-11 64.4 -1.0 73 128-201 57-132 (162)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.0 2.1E-06 1.5E-10 65.7 4.9 107 87-197 185-315 (344)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.0 2.3E-06 1.6E-10 65.5 4.4 108 86-196 156-285 (344)
38 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.9 2.8E-06 2E-10 66.8 3.6 18 132-149 108-125 (460)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.4 0.00014 1E-08 49.6 6.2 106 87-195 14-142 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.0 0.00082 5.9E-08 45.5 6.0 86 110-196 12-112 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.5 0.0021 1.5E-07 43.2 5.3 109 86-196 15-144 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 95.2 0.015 1.1E-06 38.8 5.2 84 109-193 13-111 (166)
43 d1r7ja_ a.4.5.49 (A:) Sso10a ( 27.5 14 0.00098 21.2 1.6 27 2-29 34-60 (90)
44 d1mkma1 a.4.5.33 (A:1-75) Tran 24.5 50 0.0037 17.6 4.6 36 3-38 37-72 (75)
No 1
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=2.1e-16 Score=114.39 Aligned_cols=151 Identities=21% Similarity=0.343 Sum_probs=129.3
Q ss_pred EEEecCCCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee
Q 039257 48 FLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK 127 (210)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 127 (210)
.+.+.+..++.++.+..++++++|++++|+++.++....+++|+.|+++ .+.+..++. +.+++.|+.++++++ ...
T Consensus 44 ~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~-~n~~~~~~~--l~~l~~L~~L~l~~~-~~~ 119 (199)
T d2omxa2 44 TLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMN-NNQIADITP--LANLTNLTGLTLFNN-QIT 119 (199)
T ss_dssp EEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECC-SSCCCCCGG--GTTCTTCSEEECCSS-CCC
T ss_pred EEECCCCCCCCccccccCCCcCcCccccccccCcccccCCccccccccc-ccccccccc--ccccccccccccccc-ccc
Confidence 5677888888888888999999999999999988777889999999999 888888876 789999999999998 777
Q ss_pred -ecccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCCcch-hhh
Q 039257 128 -FLVGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQLKV-STW 205 (210)
Q Consensus 128 -l~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~~~~-~~f 205 (210)
++ .+..+++|+.|++++|.+..+| .+..+++++.|++.+| .++.+++ ++++++|++|++++|++. .++. ..+
T Consensus 120 ~~~-~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n-~l~~l~~--l~~l~~L~~L~ls~N~i~-~i~~l~~L 193 (199)
T d2omxa2 120 DID-PLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSN-QVTDLKP--LANLTTLERLDISSNKVS-DISVLAKL 193 (199)
T ss_dssp CCG-GGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSS-CCCCCGG--GTTCTTCCEEECCSSCCC-CCGGGGGC
T ss_pred ccc-ccchhhhhHHhhhhhhhhcccc-cccccccccccccccc-cccCCcc--ccCCCCCCEEECCCCCCC-CCccccCC
Confidence 54 4778999999999999988775 5788999999999999 8889886 899999999999999874 4442 344
Q ss_pred hhc
Q 039257 206 ENL 208 (210)
Q Consensus 206 ~~l 208 (210)
.+|
T Consensus 194 ~~L 196 (199)
T d2omxa2 194 TNL 196 (199)
T ss_dssp TTC
T ss_pred CCC
Confidence 443
No 2
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.8e-16 Score=119.63 Aligned_cols=151 Identities=23% Similarity=0.268 Sum_probs=106.4
Q ss_pred EEecCCCCccCCCccCCCCccEEEeecccccccCCC--CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCccce
Q 039257 49 LVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEV--PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNL 126 (210)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 126 (210)
+.|.+.+++.+|..- .+.++.|++++|.++.++.. ..+++|+.|+++ ++.++.++. +..+++|++|++++| .+
T Consensus 15 v~C~~~~L~~iP~~l-p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~-~N~l~~l~~--~~~l~~L~~L~Ls~N-~l 89 (266)
T d1p9ag_ 15 VNCDKRNLTALPPDL-PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLD-RAELTKLQV--DGTLPVLGTLDLSHN-QL 89 (266)
T ss_dssp EECTTSCCSSCCSCC-CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECT-TSCCCEEEC--CSCCTTCCEEECCSS-CC
T ss_pred EEccCCCCCeeCcCc-CcCCCEEECcCCcCCCcCHHHhhccccccccccc-ccccccccc--ccccccccccccccc-cc
Confidence 567778888887421 24688888888888776543 667788888888 777777765 466777777777777 77
Q ss_pred e-ecccccCCCcCCEEeccCCcCc------------------------ccch-hhhcCCCCcEEEccCCCCCCCCCcccc
Q 039257 127 K-FLVGMSKLGSLQLLDISQNAIE------------------------ELPE-ELKLLINLTCLNLRGTGQLNKIPRQLI 180 (210)
Q Consensus 127 ~-l~~~~~~l~~L~~L~l~~~~l~------------------------~lp~-~~~~l~~L~~L~l~~~~~~~~lp~~~~ 180 (210)
+ .+..+.++++|++|+++++.+. .+|. .+..+++++.+++++| .++.+|...+
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N-~l~~~~~~~~ 168 (266)
T d1p9ag_ 90 QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN-NLTELPAGLL 168 (266)
T ss_dssp SSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS-CCSCCCTTTT
T ss_pred cccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccc-cccccCcccc
Confidence 6 6666666666666666655444 3332 2345678888888888 7778777667
Q ss_pred cCCCCCCeEEeeccccCCCcchhhhh
Q 039257 181 SNFSRLRGLRKFITCASSQLKVSTWE 206 (210)
Q Consensus 181 ~~l~~L~~L~l~~~~~~~~~~~~~f~ 206 (210)
..+++|++|++++|.+. .+|.+.|.
T Consensus 169 ~~l~~L~~L~Ls~N~L~-~lp~~~~~ 193 (266)
T d1p9ag_ 169 NGLENLDTLLLQENSLY-TIPKGFFG 193 (266)
T ss_dssp TTCTTCCEEECCSSCCC-CCCTTTTT
T ss_pred ccccccceeecccCCCc-ccChhHCC
Confidence 88888999999888875 67765553
No 3
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.1e-16 Score=118.38 Aligned_cols=148 Identities=22% Similarity=0.171 Sum_probs=108.8
Q ss_pred EEEecCCCCccCCCccCCCCccEEEeecccccccCCC-CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCccce
Q 039257 48 FLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEV-PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNL 126 (210)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 126 (210)
.+.+.++.++.++....+++|+.|++++|.++..+.. ..+++|+.|+++ ++.+..++...+..+.+++.|++++| .+
T Consensus 59 ~L~L~~N~l~~l~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~-~~~~~~~~~~~~~~l~~l~~L~l~~n-~l 136 (266)
T d1p9ag_ 59 QLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVS-FNRLTSLPLGALRGLGELQELYLKGN-EL 136 (266)
T ss_dssp EEECTTSCCCEEECCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECC-SSCCCCCCSSTTTTCTTCCEEECTTS-CC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-ccccceeecccccccccccccccccc-cc
Confidence 3445555555555555556666666666666554443 555666666666 55566555555666777777777777 77
Q ss_pred e-ec-ccccCCCcCCEEeccCCcCcccch-hhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCC
Q 039257 127 K-FL-VGMSKLGSLQLLDISQNAIEELPE-ELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQ 199 (210)
Q Consensus 127 ~-l~-~~~~~l~~L~~L~l~~~~l~~lp~-~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~ 199 (210)
+ +| ..+..+++++++++++|.++.+|. .+..+++|++|++++| .++.+|.+ +..+++|+.|++++|++..+
T Consensus 137 ~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~L~~lp~~-~~~~~~L~~L~L~~Np~~Cd 210 (266)
T d1p9ag_ 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN-SLYTIPKG-FFGSHLLPFAFLHGNPWLCN 210 (266)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS-CCCCCCTT-TTTTCCCSEEECCSCCBCCS
T ss_pred ceeccccccccccchhcccccccccccCccccccccccceeecccC-CCcccChh-HCCCCCCCEEEecCCCCCCC
Confidence 7 64 555678899999999999998874 5688999999999999 89999987 78899999999999998654
No 4
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=1.2e-15 Score=111.20 Aligned_cols=144 Identities=21% Similarity=0.354 Sum_probs=124.2
Q ss_pred EEEecCCCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee
Q 039257 48 FLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK 127 (210)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 127 (210)
.+.+.+..++.++.+..+++++.|++++|.++.++....+++|+.|+++ ++.++.++. +..+++|+.|+++++ .+.
T Consensus 50 ~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~~~~l~~L~~L~l~-~n~i~~l~~--l~~l~~L~~L~l~~~-~~~ 125 (210)
T d1h6ta2 50 QIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLD-ENKVKDLSS--LKDLKKLKSLSLEHN-GIS 125 (210)
T ss_dssp EEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECC-SSCCCCGGG--GTTCTTCCEEECTTS-CCC
T ss_pred EEECcCCCCCCchhHhhCCCCCEEeCCCccccCccccccCccccccccc-ccccccccc--ccccccccccccccc-ccc
Confidence 4677888888888888899999999999999988877889999999999 888998885 789999999999999 777
Q ss_pred -ecccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCCcc
Q 039257 128 -FLVGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQLK 201 (210)
Q Consensus 128 -l~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~~~ 201 (210)
++ .+..++.++.+++++|.++..+ .+..+++|+.+++++| .+..++. ++.+++|+.|++++|.+. .++
T Consensus 126 ~~~-~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n-~l~~i~~--l~~l~~L~~L~Ls~N~i~-~l~ 194 (210)
T d1h6ta2 126 DIN-GLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDN-QISDIVP--LAGLTKLQNLYLSKNHIS-DLR 194 (210)
T ss_dssp CCG-GGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSS-CCCCCGG--GTTCTTCCEEECCSSCCC-BCG
T ss_pred ccc-cccccccccccccccccccccc-cccccccccccccccc-ccccccc--ccCCCCCCEEECCCCCCC-CCh
Confidence 65 4778889999999999887654 5678899999999999 7888875 889999999999999874 444
No 5
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.66 E-value=4.2e-16 Score=112.10 Aligned_cols=119 Identities=26% Similarity=0.322 Sum_probs=70.9
Q ss_pred EEEecCCCCccCCCccCCCCccEEEeecccccc-cCCC--CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcc
Q 039257 48 FLVCAGAGLEEAPDVKEWENVRRLSLMQNQIET-LSEV--PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCW 124 (210)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~-l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 124 (210)
-+.|.+.+++.+|..- ...+++|++++|.++. ++.. ..+++|+.|+++ ++.+..++...|..+++|+.|++++|
T Consensus 12 ~v~Cs~~~L~~iP~~l-p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~-~N~i~~~~~~~~~~~~~L~~L~Ls~N- 88 (192)
T d1w8aa_ 12 TVDCTGRGLKEIPRDI-PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELK-RNQLTGIEPNAFEGASHIQELQLGEN- 88 (192)
T ss_dssp EEECTTSCCSSCCSCC-CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECC-SSCCCCBCTTTTTTCTTCCEEECCSC-
T ss_pred EEEEeCCCcCccCCCC-CCCCCEEEeCCCCCcccccccccCCCceEeeeecc-ccccccccccccccccccceeeeccc-
Confidence 4566666777666421 2456666666666653 2222 445666666666 66666555555666666666666666
Q ss_pred cee-e-cccccCCCcCCEEeccCCcCcccch-hhhcCCCCcEEEccCC
Q 039257 125 NLK-F-LVGMSKLGSLQLLDISQNAIEELPE-ELKLLINLTCLNLRGT 169 (210)
Q Consensus 125 ~~~-l-~~~~~~l~~L~~L~l~~~~l~~lp~-~~~~l~~L~~L~l~~~ 169 (210)
.++ + |..|.++++|++|++++|.++.+|. .+..+++|+++++++|
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTC
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccc
Confidence 666 5 3455666666666666666665543 3455666666666666
No 6
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=2.2e-15 Score=109.83 Aligned_cols=138 Identities=22% Similarity=0.329 Sum_probs=121.8
Q ss_pred cEEEecCCCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCccce
Q 039257 47 NFLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNL 126 (210)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 126 (210)
..+.+.+..++.++.+..+++++.|++.+|.++.++....+++|+.|++. ++.+..++. +..++.++.++++++ .+
T Consensus 71 ~~L~L~~n~i~~l~~~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~l~-~~~~~~~~~--l~~l~~l~~l~~~~n-~l 146 (210)
T d1h6ta2 71 TKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLE-HNGISDING--LVHLPQLESLYLGNN-KI 146 (210)
T ss_dssp CEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECT-TSCCCCCGG--GGGCTTCCEEECCSS-CC
T ss_pred CEEeCCCccccCccccccCccccccccccccccccccccccccccccccc-ccccccccc--ccccccccccccccc-cc
Confidence 35677788888888888899999999999999998877889999999999 888877765 788999999999999 88
Q ss_pred e-ecccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeec
Q 039257 127 K-FLVGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFI 193 (210)
Q Consensus 127 ~-l~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~ 193 (210)
+ .+ .+..+++|+++++++|.++.++ .+.++++|+.|++++| .++++|. +..+++|++|++++
T Consensus 147 ~~~~-~~~~l~~L~~l~l~~n~l~~i~-~l~~l~~L~~L~Ls~N-~i~~l~~--l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 147 TDIT-VLSRLTKLDTLSLEDNQISDIV-PLAGLTKLQNLYLSKN-HISDLRA--LAGLKNLDVLELFS 209 (210)
T ss_dssp CCCG-GGGGCTTCSEEECCSSCCCCCG-GGTTCTTCCEEECCSS-CCCBCGG--GTTCTTCSEEEEEE
T ss_pred cccc-cccccccccccccccccccccc-cccCCCCCCEEECCCC-CCCCChh--hcCCCCCCEEEccC
Confidence 7 54 4677899999999999999876 4889999999999999 8999985 89999999999964
No 7
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.62 E-value=1.5e-15 Score=101.54 Aligned_cols=101 Identities=22% Similarity=0.258 Sum_probs=57.8
Q ss_pred cEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-ecccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCC
Q 039257 91 VTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FLVGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGT 169 (210)
Q Consensus 91 ~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~ 169 (210)
|+|+++ ++.++.++. +..+..|++|++++| .++ +|+.++.+++|++|++++|.++.+| .++.+++|+.+++++|
T Consensus 1 R~L~Ls-~n~l~~l~~--l~~l~~L~~L~ls~N-~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLA-HKDLTVLCH--LEQLLLVTHLDLSHN-RLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECT-TSCCSSCCC--GGGGTTCCEEECCSS-CCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcC-CCCCCCCcc--cccCCCCCEEECCCC-ccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCC
Confidence 345555 555555553 455566666666666 666 6555556666666666666666554 3556666666666666
Q ss_pred CCCCCCCc-ccccCCCCCCeEEeeccccC
Q 039257 170 GQLNKIPR-QLISNFSRLRGLRKFITCAS 197 (210)
Q Consensus 170 ~~~~~lp~-~~~~~l~~L~~L~l~~~~~~ 197 (210)
.++.+|. ..++.+++|+++++++|++.
T Consensus 76 -~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 -RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp -CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred -ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 5555542 12455566666666666553
No 8
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.6e-16 Score=110.18 Aligned_cols=126 Identities=22% Similarity=0.274 Sum_probs=103.2
Q ss_pred CccCCCCccEEEeecccccccCCC-CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-eccc-ccCCCc
Q 039257 61 DVKEWENVRRLSLMQNQIETLSEV-PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FLVG-MSKLGS 137 (210)
Q Consensus 61 ~~~~~~~l~~L~l~~~~~~~l~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~-~~~l~~ 137 (210)
......+++.|++++|+++.++.. ..+++|+.|+++ +|.++.++. +..+++|++|++++| .++ +|.. +..+++
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls-~N~i~~l~~--~~~l~~L~~L~ls~N-~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFS-DNEIRKLDG--FPLLRRLKTLLVNNN-RICRIGEGLDQALPD 88 (162)
T ss_dssp EEECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECC-SSCCCEECC--CCCCSSCCEEECCSS-CCCEECSCHHHHCTT
T ss_pred hccCcCcCcEEECCCCCCCccCccccccccCCEEECC-CCCCCccCC--cccCcchhhhhcccc-cccCCCccccccccc
Confidence 334446789999999999988765 668899999999 888998865 788999999999999 899 8654 457899
Q ss_pred CCEEeccCCcCcccch--hhhcCCCCcEEEccCCCCCCCCCc---ccccCCCCCCeEEe
Q 039257 138 LQLLDISQNAIEELPE--ELKLLINLTCLNLRGTGQLNKIPR---QLISNFSRLRGLRK 191 (210)
Q Consensus 138 L~~L~l~~~~l~~lp~--~~~~l~~L~~L~l~~~~~~~~lp~---~~~~~l~~L~~L~l 191 (210)
|++|++++|.++.++. .+..+++|+++++++| .++..|. .++..+++|++||.
T Consensus 89 L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N-~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 89 LTELILTNNSLVELGDLDPLASLKSLTYLCILRN-PVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSS-GGGGSTTHHHHHHHHCTTCSEETT
T ss_pred cccceeccccccccccccccccccccchhhcCCC-ccccccchHHHHHHHCCCcCeeCC
Confidence 9999999999887763 5678899999999999 7777774 23678899998874
No 9
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.62 E-value=1.2e-15 Score=101.91 Aligned_cols=116 Identities=22% Similarity=0.313 Sum_probs=95.6
Q ss_pred cEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-ecccccCCCcCCEEeccCCc
Q 039257 69 RRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FLVGMSKLGSLQLLDISQNA 147 (210)
Q Consensus 69 ~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~~~~l~~L~~L~l~~~~ 147 (210)
|.|++++|.++.++....+++|+.|+++ +|.++.+|+. +..+++|++|++++| .++ +| .++.+++|++|++++|.
T Consensus 1 R~L~Ls~n~l~~l~~l~~l~~L~~L~ls-~N~l~~lp~~-~~~l~~L~~L~l~~N-~i~~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLTVLCHLEQLLLVTHLDLS-HNRLRALPPA-LAALRCLEVLQASDN-ALENVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTTSCCSSCCCGGGGTTCCEEECC-SSCCCCCCGG-GGGCTTCCEEECCSS-CCCCCG-GGTTCSSCCEEECCSSC
T ss_pred CEEEcCCCCCCCCcccccCCCCCEEECC-CCccCcchhh-hhhhhcccccccccc-cccccC-ccccccccCeEECCCCc
Confidence 5788999999888777888999999999 9999999876 788999999999999 999 87 48889999999999999
Q ss_pred Ccccc--hhhhcCCCCcEEEccCCCCCCCCC---cccccCCCCCCeE
Q 039257 148 IEELP--EELKLLINLTCLNLRGTGQLNKIP---RQLISNFSRLRGL 189 (210)
Q Consensus 148 l~~lp--~~~~~l~~L~~L~l~~~~~~~~lp---~~~~~~l~~L~~L 189 (210)
++.+| ..+..+++|+.+++++| .+...+ ......+++|+.+
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N-~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGN-SLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTS-GGGGSSSCTTHHHHHCTTCSEE
T ss_pred cCCCCCchhhcCCCCCCEEECCCC-cCCcCccHHHHHHHHCcCcceE
Confidence 98776 46788999999999998 565443 3333446776655
No 10
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.61 E-value=1.1e-14 Score=107.19 Aligned_cols=153 Identities=22% Similarity=0.292 Sum_probs=121.2
Q ss_pred EEEecCCCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee
Q 039257 48 FLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK 127 (210)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 127 (210)
.+.+.+..++.++.+..+++|+.|++++|.+..+.....+++++.+.++ .+.++.++. +.+++.|+.+.++++ ...
T Consensus 45 ~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~-~n~~~~i~~--l~~l~~L~~l~l~~~-~~~ 120 (227)
T d1h6ua2 45 TLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKITELELS-GNPLKNVSA--IAGLQSIKTLDLTST-QIT 120 (227)
T ss_dssp EEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECC-SCCCSCCGG--GTTCTTCCEEECTTS-CCC
T ss_pred EEECCCCCCCcchhHhcCCCCcEeecCCceeeccccccccccccccccc-ccccccccc--ccccccccccccccc-ccc
Confidence 4567788888888888999999999999999887777888899999998 778888775 778888999988877 433
Q ss_pred -ec---------------------ccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCC
Q 039257 128 -FL---------------------VGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSR 185 (210)
Q Consensus 128 -l~---------------------~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~ 185 (210)
++ ..+..+++|++|++++|.+...+ .++++++|+.|++++| .++.++. ++.+++
T Consensus 121 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~Ls~n-~l~~l~~--l~~l~~ 196 (227)
T d1h6ua2 121 DVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT-PLANLSKLTTLKADDN-KISDISP--LASLPN 196 (227)
T ss_dssp CCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSS-CCCCCGG--GGGCTT
T ss_pred ccchhccccchhhhhchhhhhchhhhhccccccccccccccccccch-hhcccccceecccCCC-ccCCChh--hcCCCC
Confidence 21 12345667899999998877654 4788999999999999 8888876 889999
Q ss_pred CCeEEeeccccCCCcchhhhhhc
Q 039257 186 LRGLRKFITCASSQLKVSTWENL 208 (210)
Q Consensus 186 L~~L~l~~~~~~~~~~~~~f~~l 208 (210)
|++|++++|++....+-..+.+|
T Consensus 197 L~~L~Ls~N~lt~i~~l~~l~~L 219 (227)
T d1h6ua2 197 LIEVHLKNNQISDVSPLANTSNL 219 (227)
T ss_dssp CCEEECTTSCCCBCGGGTTCTTC
T ss_pred CCEEECcCCcCCCCcccccCCCC
Confidence 99999999987543333344443
No 11
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.59 E-value=3e-14 Score=109.17 Aligned_cols=76 Identities=25% Similarity=0.367 Sum_probs=57.1
Q ss_pred ccEEEecCCCCccCCCccCCCCccEEEeecccccccCCC--CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCc
Q 039257 46 INFLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEV--PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNC 123 (210)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~ 123 (210)
...+.|.+..++.+|.- -.+.+++|++++|.++.++.. ..+++|++|+++ ++.+..+++..|..++.|++|++++|
T Consensus 12 ~~~~~C~~~~L~~lP~~-l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~-~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 12 LRVVQCSDLGLEKVPKD-LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILI-NNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp TTEEECTTSCCCSCCCS-CCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC-SSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCCccCCC-CCCCCCEEECcCCcCCCcChhHhhccccccccccc-cccccccchhhhhCCCccCEecccCC
Confidence 34677888888888752 236788888888888887753 677888888888 77777776655777788888887776
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.9e-14 Score=109.29 Aligned_cols=159 Identities=23% Similarity=0.365 Sum_probs=112.9
Q ss_pred ccccEEEecCCCCccCCCccCCCCccEEEeecccccccCCC--CCCCCccEEEcccCCCCc-------------------
Q 039257 44 EKINFLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEV--PTCPHFVTLFLDFNGELK------------------- 102 (210)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~--~~~~~L~~L~l~~~~~~~------------------- 102 (210)
..+..+.|.+.+++.+|.. -.+.+++|++++|.++.++.. ..+++|+.|+++ ++.+.
T Consensus 11 ~~~~~v~c~~~~L~~iP~~-ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls-~n~l~~i~~~~~~~~~~~~~l~~~ 88 (284)
T d1ozna_ 11 EPKVTTSCPQQGLQAVPVG-IPAASQRIFLHGNRISHVPAASFRACRNLTILWLH-SNVLARIDAAAFTGLALLEQLDLS 88 (284)
T ss_dssp SSSCEEECCSSCCSSCCTT-CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECC-SSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCeEEEcCCCCCCccCCC-CCCCCCEEECcCCcCCCCCHHHhhccccccccccc-cccccccccccccccccccccccc
Confidence 3345677888888888752 235788999999988887753 677888888887 44443
Q ss_pred ------ccchhHhcCCCCCcEEecCCcccee-e-cccccCCCcCCEEeccCCcCcccch-hhhcCCCCcEEEccCCCCCC
Q 039257 103 ------MIADGFFQLMPSLKVLKMSNCWNLK-F-LVGMSKLGSLQLLDISQNAIEELPE-ELKLLINLTCLNLRGTGQLN 173 (210)
Q Consensus 103 ------~~~~~~~~~l~~L~~L~l~~~~~~~-l-~~~~~~l~~L~~L~l~~~~l~~lp~-~~~~l~~L~~L~l~~~~~~~ 173 (210)
.+++..|.++++|++|++++| .+. + +..+....+|+.+++++|.++.+|. .+..+++|+.|++++| .+.
T Consensus 89 ~~~~~~~l~~~~~~~l~~L~~L~l~~n-~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N-~l~ 166 (284)
T d1ozna_ 89 DNAQLRSVDPATFHGLGRLHTLHLDRC-GLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN-RIS 166 (284)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTS-CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred cccccccccchhhcccccCCEEecCCc-ccccccccccchhcccchhhhccccccccChhHhccccchhhcccccC-ccc
Confidence 343444666777888888887 666 5 4556667778888888888777753 4567778888888888 777
Q ss_pred CCCcccccCCCCCCeEEeeccccCCCcchhhhhh
Q 039257 174 KIPRQLISNFSRLRGLRKFITCASSQLKVSTWEN 207 (210)
Q Consensus 174 ~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~f~~ 207 (210)
.+|...+..+++|+.+++++|.+.+ +++..|.+
T Consensus 167 ~l~~~~f~~l~~L~~l~l~~N~l~~-i~~~~f~~ 199 (284)
T d1ozna_ 167 SVPERAFRGLHSLDRLLLHQNRVAH-VHPHAFRD 199 (284)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTT
T ss_pred ccchhhhccccccchhhhhhccccc-cChhHhhh
Confidence 7776667788888888888887754 44455554
No 13
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.59 E-value=1.2e-14 Score=105.00 Aligned_cols=137 Identities=19% Similarity=0.268 Sum_probs=116.4
Q ss_pred CCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-ecccc
Q 039257 54 AGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FLVGM 132 (210)
Q Consensus 54 ~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~~ 132 (210)
..+++.+....+.+++.|++.++.++.++....+++|++|+++ ++.++.+++ +.++++|++|++++| .+. ++ .+
T Consensus 28 ~~~~~~~~~~~l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls-~N~l~~~~~--l~~l~~L~~L~l~~n-~~~~~~-~l 102 (199)
T d2omxa2 28 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFS-NNQLTDITP--LKNLTKLVDILMNNN-QIADIT-PL 102 (199)
T ss_dssp SSTTSEECHHHHTTCCEEECTTSCCCCCTTGGGCTTCCEEECC-SSCCCCCGG--GTTCTTCCEEECCSS-CCCCCG-GG
T ss_pred CCCCCccCHHHhcCCCEEECCCCCCCCccccccCCCcCcCccc-cccccCccc--ccCCccccccccccc-cccccc-cc
Confidence 3344444445567899999999999988777889999999999 889998886 889999999999999 888 76 47
Q ss_pred cCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCC
Q 039257 133 SKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQ 199 (210)
Q Consensus 133 ~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~ 199 (210)
.+++.|++|+++++.+...+ .+..+++|+.|++++| .+..++. +..+++|+.|++.+|.+.+.
T Consensus 103 ~~l~~L~~L~l~~~~~~~~~-~~~~l~~L~~L~l~~n-~l~~~~~--l~~~~~L~~L~l~~n~l~~l 165 (199)
T d2omxa2 103 ANLTNLTGLTLFNNQITDID-PLKNLTNLNRLELSSN-TISDISA--LSGLTSLQQLNFSSNQVTDL 165 (199)
T ss_dssp TTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSS-CCCCCGG--GTTCTTCSEEECCSSCCCCC
T ss_pred cccccccccccccccccccc-ccchhhhhHHhhhhhh-hhccccc--ccccccccccccccccccCC
Confidence 89999999999999877664 5778999999999999 7888875 88999999999999988554
No 14
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.2e-14 Score=110.37 Aligned_cols=137 Identities=19% Similarity=0.231 Sum_probs=117.1
Q ss_pred ccCCCCccEEEeecccccccCCC--CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-e-cccccCCCc
Q 039257 62 VKEWENVRRLSLMQNQIETLSEV--PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-F-LVGMSKLGS 137 (210)
Q Consensus 62 ~~~~~~l~~L~l~~~~~~~l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l-~~~~~~l~~ 137 (210)
+..+++++.|++.++.+..++.. ....+|+++++. .+.++.+++..|..+.+|+.|++++| .++ + +..+.++++
T Consensus 101 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~-~N~l~~i~~~~f~~~~~L~~L~l~~N-~l~~l~~~~f~~l~~ 178 (284)
T d1ozna_ 101 FHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ-DNALQALPDDTFRDLGNLTHLFLHGN-RISSVPERAFRGLHS 178 (284)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC-SSCCCCCCTTTTTTCTTCCEEECCSS-CCCEECTTTTTTCTT
T ss_pred hcccccCCEEecCCcccccccccccchhcccchhhhc-cccccccChhHhccccchhhcccccC-cccccchhhhccccc
Confidence 45667899999999988776544 667889999999 88999998877888999999999999 998 7 577788999
Q ss_pred CCEEeccCCcCccc-chhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCCcc
Q 039257 138 LQLLDISQNAIEEL-PEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQLK 201 (210)
Q Consensus 138 L~~L~l~~~~l~~l-p~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~~~ 201 (210)
|+++++++|.++.+ |..+..+++|++|++++| .+..++...++.+++|+++++++|++..+-+
T Consensus 179 L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N-~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 179 LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN-NLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cchhhhhhccccccChhHhhhhhhccccccccc-ccccccccccccccccCEEEecCCCCCCCcc
Confidence 99999999988865 678899999999999999 7888887668999999999999998876543
No 15
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=2.9e-14 Score=112.11 Aligned_cols=150 Identities=18% Similarity=0.271 Sum_probs=98.3
Q ss_pred EecCCCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-e
Q 039257 50 VCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-F 128 (210)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l 128 (210)
.+.+..++.++.+..++.++.+++.+|.+..++....+++|++++++ ++.+..+++ +..+..++.+.+..+ .++ +
T Consensus 225 ~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~-~~~l~~~~~--~~~~~~l~~l~~~~n-~l~~~ 300 (384)
T d2omza2 225 SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG-ANQISNISP--LAGLTALTNLELNEN-QLEDI 300 (384)
T ss_dssp ECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC-SSCCCCCGG--GTTCTTCSEEECCSS-CCSCC
T ss_pred ECCCCCCCCcchhhcccccchhccccCccCCCCcccccccCCEeecc-CcccCCCCc--ccccccccccccccc-ccccc
Confidence 44444455555455555555555555555555444555566666665 555555444 445555555555555 554 4
Q ss_pred cccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCCcchhhhhhc
Q 039257 129 LVGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQLKVSTWENL 208 (210)
Q Consensus 129 ~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~f~~l 208 (210)
+ .+..+.+++.|++++|+++.++ .+..+++|+.|++++| .++.++. ++.+++|++|++++|++.+..|-..+.+|
T Consensus 301 ~-~~~~~~~l~~L~ls~n~l~~l~-~l~~l~~L~~L~L~~n-~l~~l~~--l~~l~~L~~L~l~~N~l~~l~~l~~l~~L 375 (384)
T d2omza2 301 S-PISNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFANN-KVSDVSS--LANLTNINWLSAGHNQISDLTPLANLTRI 375 (384)
T ss_dssp G-GGGGCTTCSEEECCSSCCSCCG-GGGGCTTCCEEECCSS-CCCCCGG--GGGCTTCCEEECCSSCCCBCGGGTTCTTC
T ss_pred c-ccchhcccCeEECCCCCCCCCc-ccccCCCCCEEECCCC-CCCCChh--HcCCCCCCEEECCCCcCCCChhhccCCCC
Confidence 3 3566778888899988888775 3778899999999999 7888874 88899999999999988655544444443
No 16
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.56 E-value=3.7e-15 Score=107.07 Aligned_cols=133 Identities=19% Similarity=0.232 Sum_probs=114.0
Q ss_pred ccEEEeecccccccCCCCCCCCccEEEcccCCCCcc-cchhHhcCCCCCcEEecCCcccee-e-cccccCCCcCCEEecc
Q 039257 68 VRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKM-IADGFFQLMPSLKVLKMSNCWNLK-F-LVGMSKLGSLQLLDIS 144 (210)
Q Consensus 68 l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~-~~~~~~~~l~~L~~L~l~~~~~~~-l-~~~~~~l~~L~~L~l~ 144 (210)
.+.++.++++++.+|..- .+++++|+++ ++.++. ++...|.++++|+.|++++| .+. + +..+..+++|++|+++
T Consensus 10 ~~~v~Cs~~~L~~iP~~l-p~~l~~L~Ls-~N~i~~~~~~~~f~~l~~L~~L~L~~N-~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDI-PLHTTELLLN-DNELGRISSDGLFGRLPHLVKLELKRN-QLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCSSCCSCC-CTTCSEEECC-SCCCCSBCCSCSGGGCTTCCEEECCSS-CCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcCccCCCC-CCCCCEEEeC-CCCCcccccccccCCCceEeeeecccc-ccccccccccccccccceeeec
Confidence 346888888998888753 2689999999 898974 66666899999999999999 888 5 6788889999999999
Q ss_pred CCcCcccch-hhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCCcchhh
Q 039257 145 QNAIEELPE-ELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQLKVST 204 (210)
Q Consensus 145 ~~~l~~lp~-~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~ 204 (210)
+|.++.+|. .+.++++|++|++++| .++.+|...|..+++|+++++++|++....+...
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N-~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~ 146 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDN-QISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSS-CCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH
T ss_pred cccccccCHHHHhCCCcccccccCCc-cccccCHHHhcCCcccccccccccccccccchHH
Confidence 999998875 5789999999999999 8999998878999999999999999876655433
No 17
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=7.1e-15 Score=102.72 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=98.3
Q ss_pred ccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-ecccccCCCcCCEEeccCCcCcccchhh-
Q 039257 78 IETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FLVGMSKLGSLQLLDISQNAIEELPEEL- 155 (210)
Q Consensus 78 ~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~~~~l~~L~~L~l~~~~l~~lp~~~- 155 (210)
+...+......+++.|+++ ++.++.++.. +..+++|++|++++| .++ ++ .+..+++|++|++++|.++.+|..+
T Consensus 8 i~~~~~~~n~~~lr~L~L~-~n~I~~i~~~-~~~l~~L~~L~Ls~N-~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~ 83 (162)
T d1a9na_ 8 IEQAAQYTNAVRDRELDLR-GYKIPVIENL-GATLDQFDAIDFSDN-EIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLD 83 (162)
T ss_dssp HHTSCEEECTTSCEEEECT-TSCCCSCCCG-GGGTTCCSEEECCSS-CCCEEC-CCCCCSSCCEEECCSSCCCEECSCHH
T ss_pred HhhhHhccCcCcCcEEECC-CCCCCccCcc-ccccccCCEEECCCC-CCCccC-CcccCcchhhhhcccccccCCCcccc
Confidence 3334444566789999999 9999999864 678999999999999 999 85 5889999999999999999987654
Q ss_pred hcCCCCcEEEccCCCCCCCCCc-ccccCCCCCCeEEeeccccCC
Q 039257 156 KLLINLTCLNLRGTGQLNKIPR-QLISNFSRLRGLRKFITCASS 198 (210)
Q Consensus 156 ~~l~~L~~L~l~~~~~~~~lp~-~~~~~l~~L~~L~l~~~~~~~ 198 (210)
..+++|++|++++| .+..++. ..+..+++|+++++++|++..
T Consensus 84 ~~l~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 84 QALPDLTELILTNN-SLVELGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp HHCTTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ccccccccceeccc-cccccccccccccccccchhhcCCCcccc
Confidence 67999999999999 8888764 337889999999999998843
No 18
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.56 E-value=3.7e-14 Score=111.47 Aligned_cols=139 Identities=21% Similarity=0.255 Sum_probs=123.2
Q ss_pred cEEEecCCCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCccce
Q 039257 47 NFLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNL 126 (210)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 126 (210)
..+.+.+..+..++.+..+++++.+++.++.+..++....+..++.+... .+.+..++. +..+++++.|++++| .+
T Consensus 244 ~~L~l~~n~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~-~n~l~~~~~--~~~~~~l~~L~ls~n-~l 319 (384)
T d2omza2 244 TDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELN-ENQLEDISP--ISNLKNLTYLTLYFN-NI 319 (384)
T ss_dssp SEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC-SSCCSCCGG--GGGCTTCSEEECCSS-CC
T ss_pred chhccccCccCCCCcccccccCCEeeccCcccCCCCcccccccccccccc-ccccccccc--cchhcccCeEECCCC-CC
Confidence 35567777888888888889999999999999888777888999999999 888887765 789999999999999 99
Q ss_pred e-ecccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeecc
Q 039257 127 K-FLVGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFIT 194 (210)
Q Consensus 127 ~-l~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~ 194 (210)
+ ++. +..+++|++|++++|.++.+| .+.++++|++|++++| .++.+++ ++++++|+.|++++|
T Consensus 320 ~~l~~-l~~l~~L~~L~L~~n~l~~l~-~l~~l~~L~~L~l~~N-~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 320 SDISP-VSSLTKLQRLFFANNKVSDVS-SLANLTNINWLSAGHN-QISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp SCCGG-GGGCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSS-CCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCcc-cccCCCCCEEECCCCCCCCCh-hHcCCCCCCEEECCCC-cCCCChh--hccCCCCCEeeCCCC
Confidence 9 763 788999999999999999886 6899999999999999 8899886 899999999999887
No 19
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.54 E-value=9.3e-14 Score=106.36 Aligned_cols=143 Identities=14% Similarity=0.221 Sum_probs=120.1
Q ss_pred ccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-e-cccccCCCcCC
Q 039257 62 VKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-F-LVGMSKLGSLQ 139 (210)
Q Consensus 62 ~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l-~~~~~~l~~L~ 139 (210)
+..+++++.+.+.++.+..++.. .+++++.|++. ++.....++..|.+++.+++|++++| .++ + +..+.++++|+
T Consensus 146 ~~~l~~L~~l~l~~n~l~~l~~~-~~~~L~~L~l~-~n~~~~~~~~~~~~~~~l~~L~~s~n-~l~~~~~~~~~~l~~L~ 222 (305)
T d1xkua_ 146 FQGMKKLSYIRIADTNITTIPQG-LPPSLTELHLD-GNKITKVDAASLKGLNNLAKLGLSFN-SISAVDNGSLANTPHLR 222 (305)
T ss_dssp GGGCTTCCEEECCSSCCCSCCSS-CCTTCSEEECT-TSCCCEECTGGGTTCTTCCEEECCSS-CCCEECTTTGGGSTTCC
T ss_pred cccccccCccccccCCccccCcc-cCCccCEEECC-CCcCCCCChhHhhccccccccccccc-cccccccccccccccce
Confidence 34556789999999998877654 36889999999 77777666666899999999999999 999 6 57788899999
Q ss_pred EEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccc------cCCCCCCeEEeeccccC-CCcchhhhhhc
Q 039257 140 LLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLI------SNFSRLRGLRKFITCAS-SQLKVSTWENL 208 (210)
Q Consensus 140 ~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~------~~l~~L~~L~l~~~~~~-~~~~~~~f~~l 208 (210)
+|++++|.++.+|..+..+++|++|++++| .++.++...+ ..+.+|+.+++++|++. ..+++.+|+-+
T Consensus 223 ~L~L~~N~L~~lp~~l~~l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~~~ 297 (305)
T d1xkua_ 223 ELHLNNNKLVKVPGGLADHKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV 297 (305)
T ss_dssp EEECCSSCCSSCCTTTTTCSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC
T ss_pred eeecccccccccccccccccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhccc
Confidence 999999999999999999999999999999 7888875433 45688999999999984 57788888753
No 20
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.51 E-value=2.7e-13 Score=99.58 Aligned_cols=138 Identities=20% Similarity=0.259 Sum_probs=101.2
Q ss_pred EEEecCCCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEccc---------------------CCCCcccch
Q 039257 48 FLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDF---------------------NGELKMIAD 106 (210)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~---------------------~~~~~~~~~ 106 (210)
.+.+.+..++.++.+..+++++.+.+.++.++.++....++.|+.+.+++ ++.+.....
T Consensus 67 ~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~i~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 146 (227)
T d1h6ua2 67 GLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP 146 (227)
T ss_dssp EEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG
T ss_pred EeecCCceeeccccccccccccccccccccccccccccccccccccccccccccccchhccccchhhhhchhhhhchhhh
Confidence 34455555655555666666666666666665555445555555555552 333333222
Q ss_pred hHhcCCCCCcEEecCCcccee-ecccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCC
Q 039257 107 GFFQLMPSLKVLKMSNCWNLK-FLVGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSR 185 (210)
Q Consensus 107 ~~~~~l~~L~~L~l~~~~~~~-l~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~ 185 (210)
+..+++|+.|++++| .+. .+ .++++++|+.|++++|.++.+|. +.++++|++|++++| .++.+++ ++++++
T Consensus 147 --~~~~~~L~~L~l~~n-~~~~~~-~l~~l~~L~~L~Ls~n~l~~l~~-l~~l~~L~~L~Ls~N-~lt~i~~--l~~l~~ 218 (227)
T d1h6ua2 147 --LAGLTNLQYLSIGNA-QVSDLT-PLANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNN-QISDVSP--LANTSN 218 (227)
T ss_dssp --GGGCTTCCEEECCSS-CCCCCG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTS-CCCBCGG--GTTCTT
T ss_pred --hcccccccccccccc-ccccch-hhcccccceecccCCCccCCChh-hcCCCCCCEEECcCC-cCCCCcc--cccCCC
Confidence 567888999999999 877 54 37889999999999999998864 789999999999999 8999986 899999
Q ss_pred CCeEEeec
Q 039257 186 LRGLRKFI 193 (210)
Q Consensus 186 L~~L~l~~ 193 (210)
|+.|++++
T Consensus 219 L~~L~lsn 226 (227)
T d1h6ua2 219 LFIVTLTN 226 (227)
T ss_dssp CCEEEEEE
T ss_pred CCEEEeeC
Confidence 99999963
No 21
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.50 E-value=3.5e-14 Score=109.18 Aligned_cols=138 Identities=17% Similarity=0.267 Sum_probs=91.3
Q ss_pred CccCCCCccEEEeec-cccc-ccCCC-CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee--ecccccCC
Q 039257 61 DVKEWENVRRLSLMQ-NQIE-TLSEV-PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK--FLVGMSKL 135 (210)
Q Consensus 61 ~~~~~~~l~~L~l~~-~~~~-~l~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~--l~~~~~~l 135 (210)
.+..+++|++|++++ |.+. .+|.. ..+++|++|+++ .+.+..+++..+..+..|+++++++| .+. +|..++++
T Consensus 71 ~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls-~N~l~~~~~~~~~~~~~L~~l~l~~N-~~~~~~p~~l~~l 148 (313)
T d1ogqa_ 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYIT-HTNVSGAIPDFLSQIKTLVTLDFSYN-ALSGTLPPSISSL 148 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEE-EECCEEECCGGGGGCTTCCEEECCSS-EEESCCCGGGGGC
T ss_pred HHhcCccccccccccccccccccccccccccccchhhhc-cccccccccccccchhhhcccccccc-cccccCchhhccC
Confidence 466777888888876 5665 46654 677888888888 66665544444555566666666655 444 45555555
Q ss_pred CcCCEEeccCCcCc-ccc--------------------------------------------------------------
Q 039257 136 GSLQLLDISQNAIE-ELP-------------------------------------------------------------- 152 (210)
Q Consensus 136 ~~L~~L~l~~~~l~-~lp-------------------------------------------------------------- 152 (210)
+.++++++++|.+. .+|
T Consensus 149 ~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~ 228 (313)
T d1ogqa_ 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHL 228 (313)
T ss_dssp TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEEC
T ss_pred cccceeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 55555555544433 222
Q ss_pred ---------hhhhcCCCCcEEEccCCCCCC-CCCcccccCCCCCCeEEeeccccCCCcch
Q 039257 153 ---------EELKLLINLTCLNLRGTGQLN-KIPRQLISNFSRLRGLRKFITCASSQLKV 202 (210)
Q Consensus 153 ---------~~~~~l~~L~~L~l~~~~~~~-~lp~~~~~~l~~L~~L~l~~~~~~~~~~~ 202 (210)
..++.+++|+.|++++| .++ .+|.. ++++++|++|++++|.+.+.+|.
T Consensus 229 ~~~~l~~~~~~~~~~~~L~~L~Ls~N-~l~g~iP~~-l~~L~~L~~L~Ls~N~l~g~iP~ 286 (313)
T d1ogqa_ 229 AKNSLAFDLGKVGLSKNLNGLDLRNN-RIYGTLPQG-LTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp CSSEECCBGGGCCCCTTCCEEECCSS-CCEECCCGG-GGGCTTCCEEECCSSEEEEECCC
T ss_pred ccccccccccccccccccccccCccC-eecccCChH-HhCCCCCCEEECcCCcccccCCC
Confidence 13455677888888888 554 78876 88889999999999988877774
No 22
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=6.1e-13 Score=98.33 Aligned_cols=158 Identities=20% Similarity=0.229 Sum_probs=100.3
Q ss_pred cEEEecCCCCccCCCccCCCCccEEEeecccccccCCC--CCCCCccEEEcccCCCCc-ccchhHhcCCCCCcEEecCCc
Q 039257 47 NFLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEV--PTCPHFVTLFLDFNGELK-MIADGFFQLMPSLKVLKMSNC 123 (210)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~--~~~~~L~~L~l~~~~~~~-~~~~~~~~~l~~L~~L~l~~~ 123 (210)
..+.|.+.+++.+|.- -+..+++|++++|.++.++.. .++++|++|+++ ++.+. .++...|.+++.++.+.+..+
T Consensus 11 ~~i~c~~~~l~~iP~~-l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls-~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSD-LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEIS-QNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SEEEEESCSCSSCCSC-SCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEE-SCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CEEEEeCCCCCCcCCC-CCCCCCEEECcCCcCCccChhHhhccchhhhhhhc-cccccceeecccccccccccccccccc
Confidence 4677888888888742 235788888888888877664 678888888888 55443 344444555666665554432
Q ss_pred ccee-e-cccccCCCcCCEEeccCCcCc--------------------------------------------------cc
Q 039257 124 WNLK-F-LVGMSKLGSLQLLDISQNAIE--------------------------------------------------EL 151 (210)
Q Consensus 124 ~~~~-l-~~~~~~l~~L~~L~l~~~~l~--------------------------------------------------~l 151 (210)
..+. + +..+.++++|+++++++|.+. .+
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i 168 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 168 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred ccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccccc
Confidence 1333 2 344455555555555554443 33
Q ss_pred chhhhcCCCCcEEE-ccCCCCCCCCCcccccCCCCCCeEEeeccccCCCcchhhhhhc
Q 039257 152 PEELKLLINLTCLN-LRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQLKVSTWENL 208 (210)
Q Consensus 152 p~~~~~l~~L~~L~-l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~f~~l 208 (210)
+....+..++..+. +.+| .++.+|...+.++++|+.|++++|.+ ..+|...|.++
T Consensus 169 ~~~~~~~~~l~~~~~l~~n-~l~~l~~~~f~~l~~L~~L~Ls~N~l-~~l~~~~~~~l 224 (242)
T d1xwdc1 169 HNCAFNGTQLDELNLSDNN-NLEELPNDVFHGASGPVILDISRTRI-HSLPSYGLENL 224 (242)
T ss_dssp CTTTTTTCCEEEEECTTCT-TCCCCCTTTTTTSCCCSEEECTTSCC-CCCCSSSCTTC
T ss_pred ccccccchhhhcccccccc-ccccccHHHhcCCCCCCEEECCCCcC-CccCHHHHcCC
Confidence 33333344444444 3444 77888877688999999999999997 46777777765
No 23
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.39 E-value=9e-13 Score=101.14 Aligned_cols=133 Identities=21% Similarity=0.276 Sum_probs=110.2
Q ss_pred CCccEEEeecccccc---cCCC-CCCCCccEEEcccCCCCc-ccchhHhcCCCCCcEEecCCcccee-e-cccccCCCcC
Q 039257 66 ENVRRLSLMQNQIET---LSEV-PTCPHFVTLFLDFNGELK-MIADGFFQLMPSLKVLKMSNCWNLK-F-LVGMSKLGSL 138 (210)
Q Consensus 66 ~~l~~L~l~~~~~~~---l~~~-~~~~~L~~L~l~~~~~~~-~~~~~~~~~l~~L~~L~l~~~~~~~-l-~~~~~~l~~L 138 (210)
.+++.|++.++.+.+ +|.. ..+++|++|++++++.+. .+|.. +.++++|++|++++| .+. + +..+..+..|
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~-i~~L~~L~~L~Ls~N-~l~~~~~~~~~~~~~L 127 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA-IAKLTQLHYLYITHT-NVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGG-GGGCTTCSEEEEEEE-CCEEECCGGGGGCTTC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccc-cccccccchhhhccc-cccccccccccchhhh
Confidence 368899999998874 5554 789999999998546665 78887 899999999999999 888 5 6778889999
Q ss_pred CEEeccCCcCc-ccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCC-CeEEeeccccCCCcc
Q 039257 139 QLLDISQNAIE-ELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRL-RGLRKFITCASSQLK 201 (210)
Q Consensus 139 ~~L~l~~~~l~-~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L-~~L~l~~~~~~~~~~ 201 (210)
+++++++|.+. .+|..+++++.++.+++++|.....+|.. +..+..+ +.+++++|.+.+..+
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~l~~~~~ 191 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRLTGKIP 191 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEEEEECC
T ss_pred cccccccccccccCchhhccCcccceeeccccccccccccc-ccccccccccccccccccccccc
Confidence 99999999765 77899999999999999999444578876 7777775 889998888866544
No 24
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=8e-12 Score=86.34 Aligned_cols=99 Identities=18% Similarity=0.186 Sum_probs=70.2
Q ss_pred EEEeecccccccCCC-CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-e-cccccCCCcCCEEeccCC
Q 039257 70 RLSLMQNQIETLSEV-PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-F-LVGMSKLGSLQLLDISQN 146 (210)
Q Consensus 70 ~L~l~~~~~~~l~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l-~~~~~~l~~L~~L~l~~~ 146 (210)
.+...+++...++.. ..+++|+.|++.+++.++.++...|.++++|+.|++++| .++ + +..+..+++|++|++++|
T Consensus 12 ~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 12 GLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS-GLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp CEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSS-CCCEECTTGGGSCSCCCEEECCSS
T ss_pred eEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeecc-ccCCcccccccccccccceeccCC
Confidence 355555555544444 556777788886345677777766777888888888888 777 6 466777888888888888
Q ss_pred cCcccchhhhcCCCCcEEEccCC
Q 039257 147 AIEELPEELKLLINLTCLNLRGT 169 (210)
Q Consensus 147 ~l~~lp~~~~~l~~L~~L~l~~~ 169 (210)
.++.+|..+....+|+.|++++|
T Consensus 91 ~l~~l~~~~~~~~~l~~L~L~~N 113 (156)
T d2ifga3 91 ALESLSWKTVQGLSLQELVLSGN 113 (156)
T ss_dssp CCSCCCSTTTCSCCCCEEECCSS
T ss_pred CCcccChhhhccccccccccCCC
Confidence 88877766655557788888877
No 25
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=1.4e-11 Score=85.02 Aligned_cols=107 Identities=16% Similarity=0.077 Sum_probs=89.0
Q ss_pred CCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-ec-ccccCCCcCCEEeccCCcCcccc-hhhhcCCCCcEE
Q 039257 88 PHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FL-VGMSKLGSLQLLDISQNAIEELP-EELKLLINLTCL 164 (210)
Q Consensus 88 ~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~-~~~~~l~~L~~L~l~~~~l~~lp-~~~~~l~~L~~L 164 (210)
.....+... .+.+..+|.. +.++++++.|.+.++..++ ++ ..|.++++|+.|++++|.++.++ ..+..+++|++|
T Consensus 8 ~~~~~l~c~-~~~~~~~p~~-l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L 85 (156)
T d2ifga3 8 HGSSGLRCT-RDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRL 85 (156)
T ss_dssp SSSSCEECC-SSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEE
T ss_pred CCCCeEEec-CCCCccCccc-ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccce
Confidence 334567777 6777777776 7889999999998763588 75 67899999999999999999885 557899999999
Q ss_pred EccCCCCCCCCCcccccCCCCCCeEEeeccccCC
Q 039257 165 NLRGTGQLNKIPRQLISNFSRLRGLRKFITCASS 198 (210)
Q Consensus 165 ~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~ 198 (210)
++++| .++.+|...+ ...+|+.|++++|++..
T Consensus 86 ~Ls~N-~l~~l~~~~~-~~~~l~~L~L~~Np~~C 117 (156)
T d2ifga3 86 NLSFN-ALESLSWKTV-QGLSLQELVLSGNPLHC 117 (156)
T ss_dssp ECCSS-CCSCCCSTTT-CSCCCCEEECCSSCCCC
T ss_pred eccCC-CCcccChhhh-ccccccccccCCCcccC
Confidence 99999 8999998744 45579999999999854
No 26
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.31 E-value=2.5e-14 Score=103.16 Aligned_cols=103 Identities=26% Similarity=0.317 Sum_probs=64.8
Q ss_pred cCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-ecccccCCCcCCEE
Q 039257 63 KEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FLVGMSKLGSLQLL 141 (210)
Q Consensus 63 ~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~~~~l~~L~~L 141 (210)
..+++++.|++++|.++.++....+++|+.|+++ +|.++.++.. +..++.|++|++++| .++ ++ .+..+++|++|
T Consensus 45 ~~L~~L~~L~Ls~n~I~~i~~l~~l~~L~~L~Ls-~N~i~~i~~~-~~~~~~L~~L~l~~N-~i~~l~-~~~~l~~L~~L 120 (198)
T d1m9la_ 45 STLKACKHLALSTNNIEKISSLSGMENLRILSLG-RNLIKKIENL-DAVADTLEELWISYN-QIASLS-GIEKLVNLRVL 120 (198)
T ss_dssp HHTTTCCEEECSEEEESCCCCHHHHTTCCEEECC-EEEECSCSSH-HHHHHHCCEEECSEE-ECCCHH-HHHHHHHSSEE
T ss_pred hcccccceeECcccCCCCcccccCCccccChhhc-cccccccccc-ccccccccccccccc-cccccc-ccccccccccc
Confidence 3455666777777776666544556667777776 6666666543 334456677777776 666 53 35566667777
Q ss_pred eccCCcCcccc--hhhhcCCCCcEEEccCC
Q 039257 142 DISQNAIEELP--EELKLLINLTCLNLRGT 169 (210)
Q Consensus 142 ~l~~~~l~~lp--~~~~~l~~L~~L~l~~~ 169 (210)
++++|.++.++ ..+..+++|+.|++++|
T Consensus 121 ~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp EESEEECCCHHHHHHHTTTTTCSEEEECSS
T ss_pred ccccchhccccccccccCCCccceeecCCC
Confidence 77777666554 24566667777777666
No 27
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.30 E-value=1.4e-14 Score=104.55 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=93.7
Q ss_pred CCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-ecccccCCCcCCEEeccCCcCcccchhhhcCCCCcE
Q 039257 85 PTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FLVGMSKLGSLQLLDISQNAIEELPEELKLLINLTC 163 (210)
Q Consensus 85 ~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~ 163 (210)
..+++|+.|+++ ++.++.++. +..+++|++|++++| .++ +|.....++.|++|++++|.++.++ .+..+++|+.
T Consensus 45 ~~L~~L~~L~Ls-~n~I~~i~~--l~~l~~L~~L~Ls~N-~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~ 119 (198)
T d1m9la_ 45 STLKACKHLALS-TNNIEKISS--LSGMENLRILSLGRN-LIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRV 119 (198)
T ss_dssp HHTTTCCEEECS-EEEESCCCC--HHHHTTCCEEECCEE-EECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHHHSSE
T ss_pred hcccccceeECc-ccCCCCccc--ccCCccccChhhccc-ccccccccccccccccccccccccccccc-cccccccccc
Confidence 668899999999 888999875 789999999999999 999 8866666678999999999999874 5788999999
Q ss_pred EEccCCCCCCCCCc-ccccCCCCCCeEEeeccccCC
Q 039257 164 LNLRGTGQLNKIPR-QLISNFSRLRGLRKFITCASS 198 (210)
Q Consensus 164 L~l~~~~~~~~lp~-~~~~~l~~L~~L~l~~~~~~~ 198 (210)
|++++| .++.++. ..+..+++|+.|++++|++..
T Consensus 120 L~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 120 LYMSNN-KITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp EEESEE-ECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred cccccc-hhccccccccccCCCccceeecCCCcccc
Confidence 999999 7888763 237899999999999998744
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=3.2e-10 Score=83.34 Aligned_cols=129 Identities=18% Similarity=0.238 Sum_probs=95.2
Q ss_pred ccCCCCccEEEeecccccccCCCC---CCCCccEEEcccCCCCcccchhHhcCCC-CCcEEecCCcccee-ecccccCCC
Q 039257 62 VKEWENVRRLSLMQNQIETLSEVP---TCPHFVTLFLDFNGELKMIADGFFQLMP-SLKVLKMSNCWNLK-FLVGMSKLG 136 (210)
Q Consensus 62 ~~~~~~l~~L~l~~~~~~~l~~~~---~~~~L~~L~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~~~~-l~~~~~~l~ 136 (210)
+..+++++.+.+.++.+...+... .+..+..+... ++.+..++...|.+++ .++.+++.++ .++ ++.......
T Consensus 99 ~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~-n~~l~~i~~~~~~~~~~~l~~L~l~~n-~l~~i~~~~~~~~ 176 (242)
T d1xwdc1 99 FQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD-NINIHTIERNSFVGLSFESVILWLNKN-GIQEIHNCAFNGT 176 (242)
T ss_dssp EECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEES-CTTCCEECTTSSTTSBSSCEEEECCSS-CCCEECTTTTTTC
T ss_pred ccccccccccccchhhhccccccccccccccccccccc-ccccccccccccccccccceeeecccc-cccccccccccch
Confidence 355678888888888877655543 33445455555 6677777765566654 6888999999 999 876666666
Q ss_pred cCCEE-eccCCcCcccchh-hhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeec
Q 039257 137 SLQLL-DISQNAIEELPEE-LKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFI 193 (210)
Q Consensus 137 ~L~~L-~l~~~~l~~lp~~-~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~ 193 (210)
+++.+ .+.+|.++++|.. +.++++|+.|++++| .++.+|...+.++++|+.+++.+
T Consensus 177 ~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N-~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 177 QLDELNLSDNNNLEELPNDVFHGASGPVILDISRT-RIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp CEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTS-CCCCCCSSSCTTCCEEESSSEES
T ss_pred hhhccccccccccccccHHHhcCCCCCCEEECCCC-cCCccCHHHHcCCcccccCcCCC
Confidence 66555 5677789999864 688999999999999 79999887678888888777644
No 29
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=8.4e-10 Score=83.28 Aligned_cols=62 Identities=19% Similarity=0.179 Sum_probs=32.1
Q ss_pred cCCCcCCEEeccCC-cCc-ccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeecc
Q 039257 133 SKLGSLQLLDISQN-AIE-ELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFIT 194 (210)
Q Consensus 133 ~~l~~L~~L~l~~~-~l~-~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~ 194 (210)
.++++|++|++++| .++ .....+.++++|++|++++|..+++-....++++++|+.|+++++
T Consensus 172 ~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 172 RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 34556666666654 343 233445556666666666654443322112455566666666554
No 30
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.88 E-value=6.6e-08 Score=73.96 Aligned_cols=133 Identities=23% Similarity=0.370 Sum_probs=95.5
Q ss_pred cEEEecCCCCccCCCccCCCCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCccce
Q 039257 47 NFLVCAGAGLEEAPDVKEWENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNL 126 (210)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 126 (210)
..+.+.+.+++.+|+. .++++.|++++|+++.+|.. ..+|+.|++. ++.++.++. + .+.|++|++++| .+
T Consensus 41 ~~LdLs~~~L~~lp~~--~~~L~~L~Ls~N~l~~lp~~--~~~L~~L~l~-~n~l~~l~~--l--p~~L~~L~L~~n-~l 110 (353)
T d1jl5a_ 41 HELELNNLGLSSLPEL--PPHLESLVASCNSLTELPEL--PQSLKSLLVD-NNNLKALSD--L--PPLLEYLGVSNN-QL 110 (353)
T ss_dssp SEEECTTSCCSCCCSC--CTTCSEEECCSSCCSSCCCC--CTTCCEEECC-SSCCSCCCS--C--CTTCCEEECCSS-CC
T ss_pred CEEEeCCCCCCCCCCC--CCCCCEEECCCCCCcccccc--hhhhhhhhhh-hcccchhhh--h--cccccccccccc-cc
Confidence 3567788888888853 46899999999999888754 4688999998 787877664 1 246899999999 88
Q ss_pred e-ecccccCCCcCCEEeccCCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeecccc
Q 039257 127 K-FLVGMSKLGSLQLLDISQNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCA 196 (210)
Q Consensus 127 ~-l~~~~~~l~~L~~L~l~~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~ 196 (210)
. +|. ++.+.+|++|+++++.+...|.. ...+..+.+..+ ....... +..++.++.+++.+|..
T Consensus 111 ~~lp~-~~~l~~L~~L~l~~~~~~~~~~~---~~~l~~l~~~~~-~~~~~~~--l~~l~~l~~L~l~~n~~ 174 (353)
T d1jl5a_ 111 EKLPE-LQNSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAGNN-QLEELPE--LQNLPFLTAIYADNNSL 174 (353)
T ss_dssp SSCCC-CTTCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSS-CCSSCCC--CTTCTTCCEEECCSSCC
T ss_pred ccccc-hhhhccceeeccccccccccccc---cccccchhhccc-ccccccc--ccccccceecccccccc
Confidence 8 875 57788999999998887766543 344555666555 3333322 56677777777766654
No 31
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.87 E-value=1.8e-08 Score=77.21 Aligned_cols=114 Identities=26% Similarity=0.287 Sum_probs=90.1
Q ss_pred CCccEEEeecccccccCCCCCCCCccEEEcccCCCCcccchhHhcCCCCCcEEecCCcccee-ecccccCCCcCCEEecc
Q 039257 66 ENVRRLSLMQNQIETLSEVPTCPHFVTLFLDFNGELKMIADGFFQLMPSLKVLKMSNCWNLK-FLVGMSKLGSLQLLDIS 144 (210)
Q Consensus 66 ~~l~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~~~~l~~L~~L~l~ 144 (210)
.++++|++++++++.+|.. .++|++|+++ ++.++.+|.. +.+|+.|++++| .++ ++.. .+.|++|+++
T Consensus 38 ~~l~~LdLs~~~L~~lp~~--~~~L~~L~Ls-~N~l~~lp~~----~~~L~~L~l~~n-~l~~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPEL--PPHLESLVAS-CNSLTELPEL----PQSLKSLLVDNN-NLKALSDL---PPLLEYLGVS 106 (353)
T ss_dssp HTCSEEECTTSCCSCCCSC--CTTCSEEECC-SSCCSSCCCC----CTTCCEEECCSS-CCSCCCSC---CTTCCEEECC
T ss_pred cCCCEEEeCCCCCCCCCCC--CCCCCEEECC-CCCCcccccc----hhhhhhhhhhhc-ccchhhhh---cccccccccc
Confidence 3688999999999988864 5789999999 8999998863 568999999999 888 7632 2469999999
Q ss_pred CCcCcccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeecccc
Q 039257 145 QNAIEELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCA 196 (210)
Q Consensus 145 ~~~l~~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~ 196 (210)
+|.++.+|. ++.+++|+++++++| .+...+.. ...+..+.+..+..
T Consensus 107 ~n~l~~lp~-~~~l~~L~~L~l~~~-~~~~~~~~----~~~l~~l~~~~~~~ 152 (353)
T d1jl5a_ 107 NNQLEKLPE-LQNSSFLKIIDVDNN-SLKKLPDL----PPSLEFIAAGNNQL 152 (353)
T ss_dssp SSCCSSCCC-CTTCTTCCEEECCSS-CCSCCCCC----CTTCCEEECCSSCC
T ss_pred ccccccccc-hhhhccceeeccccc-cccccccc----cccccchhhccccc
Confidence 999999985 578999999999998 66666652 35566666655544
No 32
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78 E-value=4.8e-09 Score=79.04 Aligned_cols=139 Identities=17% Similarity=0.188 Sum_probs=93.0
Q ss_pred cCCCCccEEEeecccccc--cCCCCCCCCccEEEcccCCCCcccc-hhHhcCCCCCcEEecCCcccee---ecccccC-C
Q 039257 63 KEWENVRRLSLMQNQIET--LSEVPTCPHFVTLFLDFNGELKMIA-DGFFQLMPSLKVLKMSNCWNLK---FLVGMSK-L 135 (210)
Q Consensus 63 ~~~~~l~~L~l~~~~~~~--l~~~~~~~~L~~L~l~~~~~~~~~~-~~~~~~l~~L~~L~l~~~~~~~---l~~~~~~-l 135 (210)
..++++++|.+.++.+.. +.....+++|+.|+++++..+++.. ......+++|++|+++++..++ +...+.. .
T Consensus 68 ~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~ 147 (284)
T d2astb2 68 SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVS 147 (284)
T ss_dssp TTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSC
T ss_pred HhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccc
Confidence 345688999999887653 2222567889999998556666422 1224578899999999874554 3333333 4
Q ss_pred CcCCEEeccCC--cCc--ccchhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCCcc
Q 039257 136 GSLQLLDISQN--AIE--ELPEELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQLK 201 (210)
Q Consensus 136 ~~L~~L~l~~~--~l~--~lp~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~~~ 201 (210)
+.|+.|+++++ .++ .+..-..++++|++|++++|..+++-....+.++++|++|++++|...++..
T Consensus 148 ~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~ 217 (284)
T d2astb2 148 ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPET 217 (284)
T ss_dssp TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGG
T ss_pred cccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHH
Confidence 68999999875 233 2333346788999999998866664332337888999999998876544433
No 33
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.27 E-value=3.5e-08 Score=67.95 Aligned_cols=80 Identities=26% Similarity=0.297 Sum_probs=57.6
Q ss_pred hcCCCCCcEEecCCcccee-ec---ccccCCCcCCEEeccCCcCcccch-hhhcCCCCcEEEccCCCCCCCCCc------
Q 039257 109 FQLMPSLKVLKMSNCWNLK-FL---VGMSKLGSLQLLDISQNAIEELPE-ELKLLINLTCLNLRGTGQLNKIPR------ 177 (210)
Q Consensus 109 ~~~l~~L~~L~l~~~~~~~-l~---~~~~~l~~L~~L~l~~~~l~~lp~-~~~~l~~L~~L~l~~~~~~~~lp~------ 177 (210)
+..++.|++|++++| .++ ++ ..+..+++|+.|++++|.++.++. ......+|+.+++.+| .+.....
T Consensus 61 ~~~~~~L~~L~Ls~N-~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~N-pl~~~~~~~~~y~ 138 (162)
T d1koha1 61 EENIPELLSLNLSNN-RLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGN-SLSDTFRDQSTYI 138 (162)
T ss_dssp HHHCTTCCCCCCCSS-CCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTS-TTSSSSSSHHHHH
T ss_pred HHhCCCCCEeeCCCc-cccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCC-CcCcCcccchhHH
Confidence 567888999999999 888 53 445678889999999998887764 2233456888899988 4543321
Q ss_pred -ccccCCCCCCeEE
Q 039257 178 -QLISNFSRLRGLR 190 (210)
Q Consensus 178 -~~~~~l~~L~~L~ 190 (210)
.++..+++|+.||
T Consensus 139 ~~i~~~~P~L~~LD 152 (162)
T d1koha1 139 SAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHTTSTTCCEET
T ss_pred HHHHHHCCCCCEEC
Confidence 2356788888886
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24 E-value=2.2e-07 Score=73.30 Aligned_cols=101 Identities=20% Similarity=0.319 Sum_probs=50.7
Q ss_pred CccEEEeecccccccC--C-CCCCCCccEEEcccCCCCcccc----hhHhcCCCCCcEEecCCcccee-e-----ccccc
Q 039257 67 NVRRLSLMQNQIETLS--E-VPTCPHFVTLFLDFNGELKMIA----DGFFQLMPSLKVLKMSNCWNLK-F-----LVGMS 133 (210)
Q Consensus 67 ~l~~L~l~~~~~~~l~--~-~~~~~~L~~L~l~~~~~~~~~~----~~~~~~l~~L~~L~l~~~~~~~-l-----~~~~~ 133 (210)
+++.|+++++++.... . ...++++++|++. ++.++... ...+..+++|+.|++++| .++ . .+.+.
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~-~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N-~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLD-DCGLTEARCKDISSALRVNPALAELNLRSN-ELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEE-SSCCCHHHHHHHHHHHHTCTTCCEEECTTC-CCHHHHHHHHHHTTC
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeC-CCCCCHHHHHHHHHHHhcCCCCCEEECcCC-cCChHHHHHHHHHHh
Confidence 4566666666665411 1 1345566666666 55554211 111345666666666666 553 1 12221
Q ss_pred C-CCcCCEEeccCCcCcc-----cchhhhcCCCCcEEEccCC
Q 039257 134 K-LGSLQLLDISQNAIEE-----LPEELKLLINLTCLNLRGT 169 (210)
Q Consensus 134 ~-l~~L~~L~l~~~~l~~-----lp~~~~~l~~L~~L~l~~~ 169 (210)
. ..+|+.|++++|.++. ++..+..+++|++|++++|
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N 122 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 122 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSS
T ss_pred cCCCCCCEEECCCCCccccccccccchhhccccccccccccc
Confidence 1 2346666666665542 2233445566666666666
No 35
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.05 E-value=1.7e-07 Score=64.42 Aligned_cols=73 Identities=21% Similarity=0.140 Sum_probs=57.8
Q ss_pred ecccccCCCcCCEEeccCCcCcccc---hhhhcCCCCcEEEccCCCCCCCCCcccccCCCCCCeEEeeccccCCCcc
Q 039257 128 FLVGMSKLGSLQLLDISQNAIEELP---EELKLLINLTCLNLRGTGQLNKIPRQLISNFSRLRGLRKFITCASSQLK 201 (210)
Q Consensus 128 l~~~~~~l~~L~~L~l~~~~l~~lp---~~~~~l~~L~~L~l~~~~~~~~lp~~~~~~l~~L~~L~l~~~~~~~~~~ 201 (210)
++.....+++|++|++++|.++.++ ..+..+++|+.|++++| .+++++.-.......|+.+++++|++.....
T Consensus 57 l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N-~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~ 132 (162)
T d1koha1 57 LRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN-ELKSERELDKIKGLKLEELWLDGNSLSDTFR 132 (162)
T ss_dssp HHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTS-CCCCGGGHHHHTTCCCSSCCCTTSTTSSSSS
T ss_pred hHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccC-ccccchhhhhhhccccceeecCCCCcCcCcc
Confidence 4444457889999999999998664 45678999999999999 8998876223455679999999999976543
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.03 E-value=2.1e-06 Score=65.75 Aligned_cols=107 Identities=14% Similarity=0.113 Sum_probs=52.4
Q ss_pred CCCccEEEcccCCCCccc-----chhHhcCCCCCcEEecCCcccee------ecccccCCCcCCEEeccCCcCccc----
Q 039257 87 CPHFVTLFLDFNGELKMI-----ADGFFQLMPSLKVLKMSNCWNLK------FLVGMSKLGSLQLLDISQNAIEEL---- 151 (210)
Q Consensus 87 ~~~L~~L~l~~~~~~~~~-----~~~~~~~l~~L~~L~l~~~~~~~------l~~~~~~l~~L~~L~l~~~~l~~l---- 151 (210)
...++.|+++ .+.+..- ....+..+++|+.|++++| .++ +...+...++|++|++++|.++.-
T Consensus 185 ~~~L~~L~L~-~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N-~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~ 262 (344)
T d2ca6a1 185 HRLLHTVKMV-QNGIRPEGIEHLLLEGLAYCQELKVLDLQDN-TFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262 (344)
T ss_dssp CTTCCEEECC-SSCCCHHHHHHHHHTTGGGCTTCCEEECCSS-CCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred hhhhcccccc-cccccccccccchhhhhcchhhhcccccccc-cccccccccccccccccccchhhhhhcCccCchhhHH
Confidence 3455666665 4444321 0111344556666666666 543 223445556666666666655421
Q ss_pred -chhhhc--CCCCcEEEccCCCCCCC-----CCcccc-cCCCCCCeEEeeccccC
Q 039257 152 -PEELKL--LINLTCLNLRGTGQLNK-----IPRQLI-SNFSRLRGLRKFITCAS 197 (210)
Q Consensus 152 -p~~~~~--l~~L~~L~l~~~~~~~~-----lp~~~~-~~l~~L~~L~l~~~~~~ 197 (210)
-..+.. -+.|++|++++| .++. +... + .+.++|++|++++|.+.
T Consensus 263 l~~~l~~~~~~~L~~L~ls~N-~i~~~~~~~l~~~-l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 263 VVDAFSKLENIGLQTLRLQYN-EIELDAVRTLKTV-IDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHHHHHTCSSCCCCEEECCSS-CCBHHHHHHHHHH-HHHHCTTCCEEECTTSBSC
T ss_pred HHHHhhhccCCCCCEEECCCC-cCChHHHHHHHHH-HHccCCCCCEEECCCCcCC
Confidence 112222 234666666666 3432 1111 2 24556666777666663
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.99 E-value=2.3e-06 Score=65.55 Aligned_cols=108 Identities=23% Similarity=0.244 Sum_probs=70.4
Q ss_pred CCCCccEEEcccCCCCcccch----hHhcCCCCCcEEecCCcccee-------ecccccCCCcCCEEeccCCcCcc----
Q 039257 86 TCPHFVTLFLDFNGELKMIAD----GFFQLMPSLKVLKMSNCWNLK-------FLVGMSKLGSLQLLDISQNAIEE---- 150 (210)
Q Consensus 86 ~~~~L~~L~l~~~~~~~~~~~----~~~~~l~~L~~L~l~~~~~~~-------l~~~~~~l~~L~~L~l~~~~l~~---- 150 (210)
..+.|+.+.++ .+.+..-.. ..+...+.++.+++++| .++ +...+...++|+.|++++|.++.
T Consensus 156 ~~~~L~~l~l~-~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n-~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~ 233 (344)
T d2ca6a1 156 NAPPLRSIICG-RNRLENGSMKEWAKTFQSHRLLHTVKMVQN-GIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSS 233 (344)
T ss_dssp TCCCCCEEECC-SSCCTGGGHHHHHHHHHHCTTCCEEECCSS-CCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHH
T ss_pred cCcccceeecc-cccccccccccccchhhhhhhhcccccccc-cccccccccchhhhhcchhhhcccccccccccccccc
Confidence 34566777776 555542211 11456778888888888 765 12445667888999998887752
Q ss_pred -cchhhhcCCCCcEEEccCCCCCCCCCccc----cc--CCCCCCeEEeecccc
Q 039257 151 -LPEELKLLINLTCLNLRGTGQLNKIPRQL----IS--NFSRLRGLRKFITCA 196 (210)
Q Consensus 151 -lp~~~~~l~~L~~L~l~~~~~~~~lp~~~----~~--~l~~L~~L~l~~~~~ 196 (210)
+...+...++|+.|++++| .++...... +. ..+.|++|++++|.+
T Consensus 234 ~L~~~l~~~~~L~~L~Ls~n-~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i 285 (344)
T d2ca6a1 234 ALAIALKSWPNLRELGLNDC-LLSARGAAAVVDAFSKLENIGLQTLRLQYNEI 285 (344)
T ss_dssp HHHHHGGGCTTCCEEECTTC-CCCHHHHHHHHHHHHTCSSCCCCEEECCSSCC
T ss_pred cccccccccccchhhhhhcC-ccCchhhHHHHHHhhhccCCCCCEEECCCCcC
Confidence 3345677888999999888 565432111 22 236788999988876
No 38
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.91 E-value=2.8e-06 Score=66.77 Aligned_cols=18 Identities=33% Similarity=0.471 Sum_probs=8.4
Q ss_pred ccCCCcCCEEeccCCcCc
Q 039257 132 MSKLGSLQLLDISQNAIE 149 (210)
Q Consensus 132 ~~~l~~L~~L~l~~~~l~ 149 (210)
+..+++|++|++++|.+.
T Consensus 108 l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 108 LRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TTSCTTCCEEECCSSBCH
T ss_pred hhccccccccccccccch
Confidence 344444555555544443
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.44 E-value=0.00014 Score=49.58 Aligned_cols=106 Identities=8% Similarity=0.079 Sum_probs=62.5
Q ss_pred CCCccEEEcccCCCCcc-----cchhHhcCCCCCcEEecCCcccee------ecccccCCCcCCEEeccCCcCcc-----
Q 039257 87 CPHFVTLFLDFNGELKM-----IADGFFQLMPSLKVLKMSNCWNLK------FLVGMSKLGSLQLLDISQNAIEE----- 150 (210)
Q Consensus 87 ~~~L~~L~l~~~~~~~~-----~~~~~~~~l~~L~~L~l~~~~~~~------l~~~~~~l~~L~~L~l~~~~l~~----- 150 (210)
.+.|+.|++++.+.++. +-.. +...+.|+.|++++| .++ +.+.+...+.|++|++++|.+..
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~-L~~n~~L~~L~Ls~n-~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEA-ACNSKHIEKFSLANT-AISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHH-HTTCSCCCEEECTTS-CCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHH-HhhCCccceeecccc-ccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45677777762233432 1111 456677888888887 665 12344455678888888887662
Q ss_pred cchhhhcCCCCcEEEccCCCCCCCCCc-------ccccCCCCCCeEEeeccc
Q 039257 151 LPEELKLLINLTCLNLRGTGQLNKIPR-------QLISNFSRLRGLRKFITC 195 (210)
Q Consensus 151 lp~~~~~l~~L~~L~l~~~~~~~~lp~-------~~~~~l~~L~~L~l~~~~ 195 (210)
+-..+..-+.|++|++++| ....+.. .++..-++|+.|+++.+.
T Consensus 92 l~~aL~~n~sL~~L~l~~n-~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQ-RQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHTTTTCCCSEEECCCC-SSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhCCcCCEEECCCC-cCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 2234455567888888777 4444332 113345678888876554
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.95 E-value=0.00082 Score=45.53 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=62.4
Q ss_pred cCCCCCcEEecCCcccee------ecccccCCCcCCEEeccCCcCcc-----cchhhhcCCCCcEEEccCCCCCCCCCc-
Q 039257 110 QLMPSLKVLKMSNCWNLK------FLVGMSKLGSLQLLDISQNAIEE-----LPEELKLLINLTCLNLRGTGQLNKIPR- 177 (210)
Q Consensus 110 ~~l~~L~~L~l~~~~~~~------l~~~~~~l~~L~~L~l~~~~l~~-----lp~~~~~l~~L~~L~l~~~~~~~~lp~- 177 (210)
.+.+.|+.|+++++..++ +-..+.....|++|++++|.+.. +...+...+.|+.|++++| .++.-..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n-~i~~~g~~ 90 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESN-FLTPELLA 90 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSS-BCCHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehh-hcchHHHH
Confidence 456899999999752454 22456677889999999998762 2234556688999999999 6654211
Q ss_pred ---ccccCCCCCCeEEeecccc
Q 039257 178 ---QLISNFSRLRGLRKFITCA 196 (210)
Q Consensus 178 ---~~~~~l~~L~~L~l~~~~~ 196 (210)
.++..-++|++|++++|..
T Consensus 91 ~l~~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 91 RLLRSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp HHHHHTTTTCCCSEEECCCCSS
T ss_pred HHHHHHHhCCcCCEEECCCCcC
Confidence 1256678899999988765
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.48 E-value=0.0021 Score=43.21 Aligned_cols=109 Identities=15% Similarity=0.148 Sum_probs=64.0
Q ss_pred CCCCccEEEcccCCCCcccc----hhHhcCCCCCcEEecCCcccee------ecccccCCCcCCEEeccCCcCc-----c
Q 039257 86 TCPHFVTLFLDFNGELKMIA----DGFFQLMPSLKVLKMSNCWNLK------FLVGMSKLGSLQLLDISQNAIE-----E 150 (210)
Q Consensus 86 ~~~~L~~L~l~~~~~~~~~~----~~~~~~l~~L~~L~l~~~~~~~------l~~~~~~l~~L~~L~l~~~~l~-----~ 150 (210)
..+.|+.|++++.+.++.-. ...+...++|+.|++++| .++ +.+.+.....++.+++++|.+. .
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n-~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGT-RSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTS-CCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCC-cccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 34667777776224443211 111456778888888888 765 2244555677888888887765 2
Q ss_pred cchhhhcCCCCcEEEccCCC-CCCC-----CCcccccCCCCCCeEEeecccc
Q 039257 151 LPEELKLLINLTCLNLRGTG-QLNK-----IPRQLISNFSRLRGLRKFITCA 196 (210)
Q Consensus 151 lp~~~~~l~~L~~L~l~~~~-~~~~-----lp~~~~~~l~~L~~L~l~~~~~ 196 (210)
+-..+...++|+.+++..+. .++. +.. ++...++|++|++..+..
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~-~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIAN-MLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHH-HHHHCSSCCEEECCCSSH
T ss_pred HHHHHHhCccccEEeeccCCCcCcHHHHHHHHH-HHHhCCCcCEEeCcCCCC
Confidence 22455666778776665431 3322 222 245677888888866654
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.23 E-value=0.015 Score=38.76 Aligned_cols=84 Identities=18% Similarity=0.161 Sum_probs=59.7
Q ss_pred hcCCCCCcEEecCCcccee------ecccccCCCcCCEEeccCCcCcc-----cchhhhcCCCCcEEEccCCCCCCCCCc
Q 039257 109 FQLMPSLKVLKMSNCWNLK------FLVGMSKLGSLQLLDISQNAIEE-----LPEELKLLINLTCLNLRGTGQLNKIPR 177 (210)
Q Consensus 109 ~~~l~~L~~L~l~~~~~~~------l~~~~~~l~~L~~L~l~~~~l~~-----lp~~~~~l~~L~~L~l~~~~~~~~lp~ 177 (210)
..+.+.|+.|+++++..++ +...+...++|+.|++++|.++. +-..+...+.++.+++++| .++.-..
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~-~~~~~g~ 91 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESN-FISGSGI 91 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSS-CCCHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccc-cccchhH
Confidence 4567899999999842565 23556678899999999998762 2234567789999999998 5543211
Q ss_pred ----ccccCCCCCCeEEeec
Q 039257 178 ----QLISNFSRLRGLRKFI 193 (210)
Q Consensus 178 ----~~~~~l~~L~~L~l~~ 193 (210)
..+...++|+.+++..
T Consensus 92 ~~l~~~l~~~~~L~~l~L~l 111 (166)
T d1io0a_ 92 LALVEALQSNTSLIELRIDN 111 (166)
T ss_dssp HHHHHGGGGCSSCCEEECCC
T ss_pred HHHHHHHHhCccccEEeecc
Confidence 1256778899877753
No 43
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=27.50 E-value=14 Score=21.22 Aligned_cols=27 Identities=4% Similarity=0.007 Sum_probs=20.4
Q ss_pred hHhhHHHHHhHhccceecCCCeeEehHH
Q 039257 2 RGYYIVGTLVHVCLLEEIEDDKVKMLDV 29 (210)
Q Consensus 2 ~~~~~~~~L~~~~l~~~~~~~~~~~hd~ 29 (210)
.+..|++.|+.+|+|...+ ..|.+=+-
T Consensus 34 ~~~kyl~~L~~~GLI~~~~-~~Y~iT~k 60 (90)
T d1r7ja_ 34 LTGRYIKMLMDLEIIRQEG-KQYMLTKK 60 (90)
T ss_dssp HHHHHHHHHHHTTSEEEET-TEEEECHH
T ss_pred HHHHHHHHHHHCCCeeecC-CEEEECcc
Confidence 5789999999999998754 44555443
No 44
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.48 E-value=50 Score=17.58 Aligned_cols=36 Identities=8% Similarity=0.027 Sum_probs=29.1
Q ss_pred HhhHHHHHhHhccceecCCCeeEehHHHHHHHHHHH
Q 039257 3 GYYIVGTLVHVCLLEEIEDDKVKMLDVVRDMALWIA 38 (210)
Q Consensus 3 ~~~~~~~L~~~~l~~~~~~~~~~~hd~~~~~~~~~~ 38 (210)
.+.++..|...++++.++...|..-.-+.+++..+.
T Consensus 37 ~~rll~tL~~~g~l~~~~~g~y~lG~~l~~lg~~~l 72 (75)
T d1mkma1 37 AYKYMVVLEEKGFVLRKKDKRYVPGYKLIEYGSFVL 72 (75)
T ss_dssp HHHHHHHHHHTTSEEECTTSCEEECTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEECCCCCEeecHHHHHHHHHHH
Confidence 578899999999999877778888887777776554
Done!