BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039258
(234 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFV 91
Q S EL A+ FS N++G+G +G VYKG L + +V ++ + +G F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKL 151
E E + HRNL ++ C + + LV+ YM NGS+ L + + L
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLRERPESQP--PL 136
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
+R IA+ A + YLH +C P ++H D+K +N+LLD + A VGDFGL+K + D+
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DY 194
Query: 212 LDTASETPSSSIGIKGTVGYVAP 234
D ++GT+G++AP
Sbjct: 195 KDX-----HVXXAVRGTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 14/203 (6%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFV 91
Q S EL A+ F N++G+G +G VYKG L + +V ++ + +G F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKL 151
E E + HRNL ++ C + + LV+ YM NGS+ L + + L
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLRERPESQP--PL 128
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
+R IA+ A + YLH +C P ++H D+K +N+LLD + A VGDFGL+K + D+
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DY 186
Query: 212 LDTASETPSSSIGIKGTVGYVAP 234
D ++G +G++AP
Sbjct: 187 KDX-----HVXXAVRGXIGHIAP 204
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 25 DTLPMEKQFPMVSY----AELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN 80
D L P SY +L +AT F +IG G +G VYKG+L D VA+K
Sbjct: 14 DALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRT 72
Query: 81 LKQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
+ F E E L RH +L +I C + L+++YMENG+L+ L+
Sbjct: 73 PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM-----ILIYKYMENGNLKRHLY 127
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
++ L +S QR+ I I A + YLH ++H D+K N+LLD + V + D
Sbjct: 128 GSD--LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 201 FGLSKF---LSSDHLDTASETPSSSIGIKGTVGYVAP 234
FG+SK L HL +KGT+GY+ P
Sbjct: 183 FGISKKGTELGQTHLXXV---------VKGTLGYIDP 210
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 25 DTLPMEKQFPMVSY----AELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN 80
D L P SY +L +AT F +IG G +G VYKG+L D VA+K
Sbjct: 14 DALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRT 72
Query: 81 LKQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
+ F E E L RH +L +I C + L+++YMENG+L+ L+
Sbjct: 73 PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM-----ILIYKYMENGNLKRHLY 127
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
++ L +S QR+ I I A + YLH ++H D+K N+LLD + V + D
Sbjct: 128 GSD--LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITD 182
Query: 201 FGLSKF---LSSDHLDTASETPSSSIGIKGTVGYVAP 234
FG+SK L HL +KGT+GY+ P
Sbjct: 183 FGISKKGTELDQTHLXXV---------VKGTLGYIDP 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 22/191 (11%)
Query: 53 MIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRN--IRHRNLTKIIT 110
+IG+G YG+VYKG L DE VAVKV + + ++F+ E R + H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIV 74
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + G LV EY NGSL +L T+D + +A V + Y
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD--------WVSSCRLAHSVTRGLAY 126
Query: 170 LH------HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
LH + +P + H D+ NVL+ ND + DFGLS L+ + L E +++I
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 224 GIKGTVGYVAP 234
GT+ Y+AP
Sbjct: 187 SEVGTIRYMAP 197
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 35/218 (16%)
Query: 30 EKQFPMVSYAELSKATCEFSQ------SNMIGQGSYGSVYKGILGEDEMVVAVK----VI 79
+ +F S+ EL T F + N +G+G +G VYKG + + VAVK ++
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 66
Query: 80 NLKQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWL 139
++ + + F E + + +H NL +++ S G D LV+ YM NGSL D L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRL 121
Query: 140 HQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVG 199
+ LS R IA A+ I +LH N +H DIK +N+LLD A +
Sbjct: 122 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKIS 175
Query: 200 DFGLSKFLSSDHLDTASETPSSSI---GIKGTVGYVAP 234
DFGL++ ASE + ++ I GT Y+AP
Sbjct: 176 DFGLAR---------ASEKFAQTVMXSRIVGTTAYMAP 204
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 35/218 (16%)
Query: 30 EKQFPMVSYAELSKATCEFSQ------SNMIGQGSYGSVYKGILGEDEMVVAVK----VI 79
+ +F S+ EL T F + N +G+G +G VYKG + + VAVK ++
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 66
Query: 80 NLKQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWL 139
++ + + F E + + +H NL +++ S G D LV+ YM NGSL D L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRL 121
Query: 140 HQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVG 199
+ LS R IA A+ I +LH N +H DIK +N+LLD A +
Sbjct: 122 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKIS 175
Query: 200 DFGLSKFLSSDHLDTASETPSSSI---GIKGTVGYVAP 234
DFGL++ ASE + ++ I GT Y+AP
Sbjct: 176 DFGLAR---------ASEKFAQTVMXXRIVGTTAYMAP 204
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 99/201 (49%), Gaps = 20/201 (9%)
Query: 34 PMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAE 93
P +Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 60
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++
Sbjct: 61 AAVMKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYGNLLDYLRECNRQ----EVNA 111
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
+ + +A ++SA+EYL +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 112 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--- 165
Query: 214 TASETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 166 ----TXTAHAGAKFPIKWTAP 182
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N ++S +
Sbjct: 63 MKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 164
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 165 -TYTAHAGAKFPIKWTAP 181
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N ++S +
Sbjct: 63 MKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 164
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 165 -TYTAHAGAKFPIKWTAP 181
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 30 EKQFPMVSYAELSKATCEFSQ------SNMIGQGSYGSVYKGILGEDEMVVAVK----VI 79
+ +F S+ EL T F + N +G+G +G VYKG + + VAVK ++
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 60
Query: 80 NLKQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWL 139
++ + + F E + + +H NL +++ S G D LV+ YM NGSL D L
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRL 115
Query: 140 HQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVG 199
+ LS R IA A+ I +LH N +H DIK +N+LLD A +
Sbjct: 116 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKIS 169
Query: 200 DFGLSKFLSSDHLDTASETPSSSI---GIKGTVGYVAP 234
DFGL++ ASE + + I GT Y+AP
Sbjct: 170 DFGLAR---------ASEKFAQXVMXXRIVGTTAYMAP 198
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+ + + +G G YG VY+G+ + + VAVK + + F+ E ++ I+H NL
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ +C ++ F ++ E+M G+L D+L + N ++S + + +A ++SA
Sbjct: 71 QLLGVC----TREPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSA 121
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+EYL + +H D+ N L+ + + V DFGLS+ ++ D T ++ G K
Sbjct: 122 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TXTAHAGAK 171
Query: 227 GTVGYVAP 234
+ + AP
Sbjct: 172 FPIKWTAP 179
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 20/201 (9%)
Query: 34 PMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAE 93
P +Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 63
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++
Sbjct: 64 AAVMKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNA 114
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
+ + +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 115 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--- 168
Query: 214 TASETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 169 ----TYTAHAGAKFPIKWTAP 185
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 23/192 (11%)
Query: 46 CEFSQSNMIGQGSYGSVYKGIL-GEDEMVVAVKVINLKQKGAFR--SFVAECEALRNIRH 102
C+ + IG GS+G+V++ G D VAVK++ + A R F+ E ++ +RH
Sbjct: 37 CDLNIKEKIGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ + + + ++V EY+ GSL LH++ + L +R+++A D
Sbjct: 94 PNIVLFMGAVTQPPNL-----SIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYD 145
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
VA + YLH N PP+VH ++K N+L+D V DFGLS+ +S L SS
Sbjct: 146 VAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--------SS 196
Query: 223 IGIKGTVGYVAP 234
GT ++AP
Sbjct: 197 KSAAGTPEWMAP 208
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 23/192 (11%)
Query: 46 CEFSQSNMIGQGSYGSVYKGIL-GEDEMVVAVKVINLKQKGAFR--SFVAECEALRNIRH 102
C+ + IG GS+G+V++ G D VAVK++ + A R F+ E ++ +RH
Sbjct: 37 CDLNIKEKIGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ + + + ++V EY+ GSL LH++ + L +R+++A D
Sbjct: 94 PNIVLFMGAVTQPPNL-----SIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYD 145
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
VA + YLH N PP+VH D+K N+L+D V DFGLS+ +S L +
Sbjct: 146 VAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA---- 200
Query: 223 IGIKGTVGYVAP 234
GT ++AP
Sbjct: 201 ----GTPEWMAP 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N ++S +
Sbjct: 63 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 164
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 165 -TYTAHAGAKFPIKWTAP 181
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N ++S +
Sbjct: 68 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVL 118
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 119 LYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 169
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 170 -TYTAHAGAKFPIKWTAP 186
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N ++S +
Sbjct: 63 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 164
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 165 -TYTAHAGAKFPIKWTAP 181
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 68 MKEIKHPNLVQLLGVC----TREPPF-YIIIEFMTYGNLLDYLRECNRQ----EVNAVVL 118
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 119 LYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 169
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 170 -TYTAHAGAKFPIKWTAP 186
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 68 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 118
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 169
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 170 -TXTAHAGAKFPIKWTAP 186
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 63 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 113
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 164
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 165 -TYTAHAGAKFPIKWTAP 181
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 63
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 64 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 114
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 115 LYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 165
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 166 -TYTAPAGAKFPIKWTAP 182
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 65 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 115
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 166
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 167 -TYTAPAGAKFPIKWTAP 183
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+ + + +G G YG VY+G+ + + VAVK + + F+ E ++ I+H NL
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ +C ++ F ++ E+M G+L D+L + N ++S + + +A ++SA
Sbjct: 71 QLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSA 121
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+EYL + +H D+ N L+ + + V DFGLS+ ++ D T ++ G K
Sbjct: 122 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TFTAHAGAK 171
Query: 227 GTVGYVAP 234
+ + AP
Sbjct: 172 FPIKWTAP 179
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 68 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 118
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 119 LYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 169
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 170 -TYTAHAGAKFPIKWTAP 186
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 63 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 113
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 164
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 165 -TYTAHAGAKFPIKWTAP 181
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 65 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 115
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 166
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 167 -TYTAHAGAKFPIKWTAP 183
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 75
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 76 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 126
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 127 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 177
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 178 -TYTAHAGAKFPIKWTAP 194
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 65 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 115
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 166
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 167 -TYTAHAGAKFPIKWTAP 183
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N +++ +
Sbjct: 68 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVL 118
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL + +H D+ N L+ + + V DFGLS+ ++ D
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD------ 169
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 170 -TYTAHAGAKFPIKWTAP 186
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+ + + +G G +G VY+G+ + + VAVK + + F+ E ++ I+H NL
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ +C+ + F ++ E+M G+L D+L + N ++S + + +A ++SA
Sbjct: 71 QLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSA 121
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+EYL + +H D+ N L+ + + V DFGLS+ ++ D T ++ G K
Sbjct: 122 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-------TXTAHAGAK 171
Query: 227 GTVGYVAP 234
+ + AP
Sbjct: 172 FPIKWTAP 179
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+ + + +G G YG VY G+ + + VAVK + + F+ E ++ I+H NL
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ +C+ +V EYM G+L D+L + N +++ + + +A ++SA
Sbjct: 92 QLLGVCTLEPPF-----YIVTEYMPYGNLLDYLRECNRE----EVTAVVLLYMATQISSA 142
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+EYL + +H D+ N L+ + V V DFGLS+ ++ D T ++ G K
Sbjct: 143 MEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD-------TYTAHAGAK 192
Query: 227 GTVGYVAP 234
+ + AP
Sbjct: 193 FPIKWTAP 200
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 41/217 (18%)
Query: 37 SYAELSKATCEFSQS---------NMIGQGSYGSVYKGIL---GEDEMVVAVKVI----N 80
++ + ++A EF++ +IG G +G V G L G+ E+ VA+K +
Sbjct: 15 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 74
Query: 81 LKQKGAFRSFVAECEALRNIRHRN---LTKIITICSSIDSKGADFKALVFEYMENGSLED 137
KQ+ R F++E + H N L ++T + + ++ E+MENGSL+
Sbjct: 75 EKQR---RDFLSEASIMGQFDHPNVIHLEGVVTKSTPV--------MIITEFMENGSLDS 123
Query: 138 WLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
+L Q + V IQ V + +A+ ++YL VH D+ N+L+++++V
Sbjct: 124 FLRQNDGQFTV-----IQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCK 175
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
V DFGLS+FL DT+ T +S++G K + + AP
Sbjct: 176 VSDFGLSRFLED---DTSDPTYTSALGGKIPIRWTAP 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 269
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N ++S +
Sbjct: 270 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVL 320
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+ +A ++SA+EYL +H ++ N L+ + + V DFGLS+ ++ D
Sbjct: 321 LYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD------ 371
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 372 -TYTAHAGAKFPIKWTAP 388
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 30/191 (15%)
Query: 53 MIGQGSYGSVYKGIL---GEDEMVVAVKVINLKQKGAF-----RSFVAECEALRNIRHRN 104
+IG G +G V +G L G+ E VA+K + KG + R F++E + H N
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQRREFLSEASIMGQFEHPN 78
Query: 105 LTKIITICSSIDSKGADFKALVF-EYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
+ ++ + ++ ++ E+MENG+L+ +L + ND + ++IQ V + +
Sbjct: 79 IIRLEGVVTN------SMPVMILTEFMENGALDSFL-RLNDG----QFTVIQLVGMLRGI 127
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
AS + YL + VH D+ N+L+++++V V DFGLS+FL + D T +SS+
Sbjct: 128 ASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP---TETSSL 181
Query: 224 GIKGTVGYVAP 234
G K + + AP
Sbjct: 182 GGKIPIRWTAP 192
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 51 SNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
S IG GS+G+VYKG D V +KV++ + F++F E LR RH N+ +
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPE-QFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ D A+V ++ E SL LH ++F+L ++IA A ++YL
Sbjct: 100 YMTK------DNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-----IDIARQTAQGMDYL 148
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
H ++H D+K +N+ L + +GDFGL+ S E P+ G+V
Sbjct: 149 HAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT------GSVL 199
Query: 231 YVAP 234
++AP
Sbjct: 200 WMAP 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 23/191 (12%)
Query: 49 SQSNMIGQGSYGSVYKGIL----GEDEMVVAVKVINLKQKGAFR-SFVAECEALRNIRHR 103
++ +IG G +G VYKG+L G+ E+ VA+K + R F+ E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ ++ + S ++ EYMENG+L+ +L + + + S++Q V + +
Sbjct: 107 NIIRLEGVISKYKPM-----MIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGI 156
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ ++YL + VH D+ N+L+++++V V DFGLS+ L D E ++
Sbjct: 157 AAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD-----PEATYTTS 208
Query: 224 GIKGTVGYVAP 234
G K + + AP
Sbjct: 209 GGKIPIRWTAP 219
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 30/191 (15%)
Query: 53 MIGQGSYGSVYKGIL---GEDEMVVAVKVINLKQKGAF-----RSFVAECEALRNIRHRN 104
+IG G +G V +G L G+ E VA+K + KG + R F++E + H N
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQRREFLSEASIMGQFEHPN 76
Query: 105 LTKIITICSSIDSKGADFKALVF-EYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
+ ++ + ++ ++ E+MENG+L+ +L + ND + ++IQ V + +
Sbjct: 77 IIRLEGVVTN------SMPVMILTEFMENGALDSFL-RLNDG----QFTVIQLVGMLRGI 125
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
AS + YL + VH D+ N+L+++++V V DFGLS+FL + D T +SS+
Sbjct: 126 ASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP---TYTSSL 179
Query: 224 GIKGTVGYVAP 234
G K + + AP
Sbjct: 180 GGKIPIRWTAP 190
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 109 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 160
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 161 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 77 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 128
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 129 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 178
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 82 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 133
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 134 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 183
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 84 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 135
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 136 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 185
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 76 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 127
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 128 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 177
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 81 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 132
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 96 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 147
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 83 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 134
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 135 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 184
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 96 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 147
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 308
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N EV + L+
Sbjct: 309 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 361
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+A ++SA+EYL + +H ++ N L+ + + V DFGLS+ ++ D
Sbjct: 362 --MATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD------ 410
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 411 -TYTAHAGAKFPIKWTAP 427
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 85 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 136
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 137 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 186
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA 96
+Y + + + + +G G YG VY+G+ + + VAVK + + F+ E
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 266
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
++ I+H NL +++ +C ++ F ++ E+M G+L D+L + N EV + L+
Sbjct: 267 MKEIKHPNLVQLLGVC----TREPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 319
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
+A ++SA+EYL + +H ++ N L+ + + V DFGLS+ ++ D
Sbjct: 320 --MATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD------ 368
Query: 217 ETPSSSIGIKGTVGYVAP 234
T ++ G K + + AP
Sbjct: 369 -TYTAHAGAKFPIKWTAP 385
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 32 QFPMVSYAELSKATCEFSQ------SNMIGQGSYGSVYKGILGEDEMVVAVK----VINL 81
+F S+ EL T F + N G+G +G VYKG + + VAVK ++++
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDI 59
Query: 82 KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQ 141
+ + F E + +H NL +++ S G D LV+ Y NGSL D L
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELL----GFSSDGDDL-CLVYVYXPNGSLLDRLSC 114
Query: 142 TNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDF 201
+ LS R IA A+ I +LH N +H DIK +N+LLD A + DF
Sbjct: 115 LDG---TPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDF 168
Query: 202 GLSKFLSSDHLDTASETPSSSIG---IKGTVGYVAP 234
GL++ ASE + + I GT Y AP
Sbjct: 169 GLAR---------ASEKFAQXVXXSRIVGTTAYXAP 195
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + + ++ KL + + +EY
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES 179
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 32/193 (16%)
Query: 52 NMIGQGSYGSVYKGIL---GEDEMVVAVKVINL----KQKGAFRSFVAECEALRNIRHRN 104
+IG G +G V G L G+ E+ VA+K + KQ+ R F++E + H N
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR---RDFLSEASIMGQFDHPN 69
Query: 105 ---LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
L ++T + + ++ E+MENGSL+ +L Q + V IQ V +
Sbjct: 70 VIHLEGVVTKSTPV--------MIITEFMENGSLDSFLRQNDGQFTV-----IQLVGMLR 116
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
+A+ ++YL VH + N+L+++++V V DFGLS+FL DT+ T +S
Sbjct: 117 GIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED---DTSDPTYTS 170
Query: 222 SIGIKGTVGYVAP 234
++G K + + AP
Sbjct: 171 ALGGKIPIRWTAP 183
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ EY+ GSL D+L + ++ KL + + +EY
Sbjct: 81 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQAHAERIDHIKL-----LQYTSQICKGMEY 132
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
E IG+G +G V G ++ VAVK I K ++F+AE + +RH NL
Sbjct: 194 ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 249
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ + ++ KG + +V EYM GSL D+L + L + ++DV A
Sbjct: 250 QLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEA 301
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+EYL N VH D+ NVL+ D VA V DFGL+K SS
Sbjct: 302 MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
E IG+G +G V G ++ VAVK I K ++F+AE + +RH NL
Sbjct: 7 ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 62
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ + ++ KG + +V EYM GSL D+L + L + ++DV A
Sbjct: 63 QLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEA 114
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+EYL N VH D+ NVL+ D VA V DFGL+K SS
Sbjct: 115 MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
E IG+G +G V G ++ VAVK I K ++F+AE + +RH NL
Sbjct: 13 ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 68
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ + ++ KG + +V EYM GSL D+L + L + ++DV A
Sbjct: 69 QLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEA 120
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+EYL N VH D+ NVL+ D VA V DFGL+K SS
Sbjct: 121 MEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 160
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
E IG+G +G V G ++ VAVK I K ++F+AE + +RH NL
Sbjct: 22 ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 77
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ + ++ KG + +V EYM GSL D+L + L + ++DV A
Sbjct: 78 QLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEA 129
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+EYL N VH D+ NVL+ D VA V DFGL+K SS
Sbjct: 130 MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 42 SKATCEFSQSNM-----IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVA 92
S+ +F + ++ +G+G++GSV Y + VVAVK + + R F
Sbjct: 2 SRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 61
Query: 93 ECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLS 152
E E L++++H N+ K +C S + L+ EY+ GSL D+L + + ++ KL
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERIDHIKL- 117
Query: 153 LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
+ + +EYL +H ++ N+L++N+ +GDFGL+K L D
Sbjct: 118 ----LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
Query: 213 DTASETPSSS 222
+ P S
Sbjct: 171 YYKVKEPGES 180
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
+G+G++GSV Y + VVAVK + + R F E E L++++H N+ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+C S + L+ E++ GSL ++L + + ++ KL + + +EY
Sbjct: 81 GVCYSAGRRNL---KLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEY 132
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
L +H D+ N+L++N+ +GDFGL+K L D + P S
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 20 VRKPIDTLPMEKQFPMV-SYAELSKATCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVA 75
VR +D E V +A+ A+C +IG G +G V G L G+ E+ VA
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAKEIDASC-IKIEKVIGVGEFGEVCSGRLKVPGKREICVA 61
Query: 76 VKVINL----KQKGAFRSFVAECEALRNIRHRN---LTKIITICSSIDSKGADFKALVFE 128
+K + KQ+ R F++E + H N L ++T C + ++ E
Sbjct: 62 IKTLKAGYTDKQR---RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITE 110
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
YMENGSL+ +L + + + ++IQ V + + S ++YL VH D+ N+
Sbjct: 111 YMENGSLDAFLRKNDG-----RFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNI 162
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
L+++++V V DFG+S+ L D E ++ G K + + AP
Sbjct: 163 LVNSNLVCKVSDFGMSRVLEDD-----PEAAYTTRGGKIPIRWTAP 203
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 73 ST------APQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 121
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 52 NMIGQGSYGSVYKGILGEDE---MVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLT 106
++G+G +GSV +G L +++ + VAVK + L + F++E +++ H N+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+++ +C + S+G ++ +M+ G L +L + + L + +D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+EYL + +H D+ N +L +DM V DFGLSK + S
Sbjct: 160 MEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYS 199
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 31/201 (15%)
Query: 38 YAELSKATCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL----KQKGAFRSF 90
+A+ A+C +IG G +G V G L G+ E+ VA+K + KQ+ R F
Sbjct: 1 FAKEIDASC-IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDF 56
Query: 91 VAECEALRNIRHRN---LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE 147
++E + H N L ++T C + ++ EYMENGSL+ +L + +
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG--- 105
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
+ ++IQ V + + S ++YL VH D+ N+L+++++V V DFG+S+ L
Sbjct: 106 --RFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
Query: 208 SSDHLDTASETPSSSIGIKGT 228
D + A T I I+ T
Sbjct: 161 EDDP-EAAYTTRGGKIPIRWT 180
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 35/207 (16%)
Query: 38 YAELSKATCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL----KQKGAFRSF 90
+A+ A+C +IG G +G V G L G+ E+ VA+K + KQ+ R F
Sbjct: 7 FAKEIDASC-IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDF 62
Query: 91 VAECEALRNIRHRN---LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE 147
++E + H N L ++T C + ++ EYMENGSL+ +L + +
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG--- 111
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
+ ++IQ V + + S ++YL VH D+ N+L+++++V V DFG+S+ L
Sbjct: 112 --RFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
Query: 208 SSDHLDTASETPSSSIGIKGTVGYVAP 234
D E ++ G K + + AP
Sbjct: 167 EDD-----PEAAYTTRGGKIPIRWTAP 188
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 75 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 123
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 124 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 78 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 126
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 73 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 121
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 73 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 121
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 78 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 126
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 101 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 149
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 100 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 148
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 149 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 93 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 141
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 142 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH E+ KL ++IA A ++YLH
Sbjct: 101 STKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH 149
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D+ +GDFGL+
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 25/198 (12%)
Query: 38 YAELSKATCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL----KQKGAFRSF 90
+A+ +A+C + +IG G +G V G L G+ E+ VA+K + + KQ+ R F
Sbjct: 15 FAKEIEASC-ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR---RDF 70
Query: 91 VAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFK 150
+ E + H N+ + + + SK +V EYMENGSL+ +L + + +
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTK--SKPV---MIVTEYMENGSLDTFLKKNDG-----Q 120
Query: 151 LSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
++IQ V + +++ ++YL VH D+ N+L+++++V V DFGLS+ L D
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 211 HLDTASETPSSSIGIKGT 228
+ A T I I+ T
Sbjct: 178 P-EAAYTTRGGKIPIRWT 194
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 24/181 (13%)
Query: 54 IGQGSYGSV-----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKI 108
+G+G++G V Y +D+M+VAVK + A + F E E L N++H ++ K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF----------KLSLIQRVN 158
+C D +VFEYM++G L +L + +L L Q ++
Sbjct: 83 YGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 159 IAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK-FLSSDHLDTASE 217
IA +AS + YL VH D+ N L+ +++ +GDFG+S+ S+D+
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 218 T 218
T
Sbjct: 195 T 195
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A A+V ++ E SL LH + E+ KL ++IA A ++YLH
Sbjct: 89 ST------APQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 137
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D +GDFGL+
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 37 SYAELSKATCEFSQS---------NMIGQGSYGSVYKGIL---GEDEMVVAVKVINL--- 81
+Y E +A F++ +IG G G V G L G+ ++ VA+K +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 82 -KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
+Q+ R F++E + H N+ ++ + + +V EYMENGSL+ +L
Sbjct: 91 ERQR---RDFLSEASIMGQFDHPNIIRLEGVVTR-----GRLAMIVTEYMENGSLDTFL- 141
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
+T+D + +++Q V + V + + YL VH D+ NVL+D+++V V D
Sbjct: 142 RTHDG----QFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSD 194
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTV 229
FGLS+ L D D A T I I+ T
Sbjct: 195 FGLSRVLEDDP-DAAXTTTGGKIPIRWTA 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 37 SYAELSKATCEFSQS---------NMIGQGSYGSVYKGIL---GEDEMVVAVKVINL--- 81
+Y E +A F++ +IG G G V G L G+ ++ VA+K +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 82 -KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
+Q+ R F++E + H N+ ++ + + +V EYMENGSL+ +L
Sbjct: 91 ERQR---RDFLSEASIMGQFDHPNIIRLEGVVTR-----GRLAMIVTEYMENGSLDTFL- 141
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
+T+D + +++Q V + V + + YL VH D+ NVL+D+++V V D
Sbjct: 142 RTHDG----QFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTV 229
FGLS+ L D D A T I I+ T
Sbjct: 195 FGLSRVLEDDP-DAAYTTTGGKIPIRWTA 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH + E+ KL ++IA A ++YLH
Sbjct: 89 STKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 137
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D +GDFGL+
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G+VYKG D VAVK++N+ ++F E LR RH N+ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ A+V ++ E SL LH + E+ KL ++IA A ++YLH
Sbjct: 77 STKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 125
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K +N+ L D +GDFGL+
Sbjct: 126 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 16 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L +T +L L Q V++A +AS + Y+
Sbjct: 74 E------EPIXIVTEYMSKGSLLDFLKGETGKYL-----RLPQLVDMAAQIASGMAYVER 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL++ + D+ TA + G K + +
Sbjct: 123 MN---YVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQ------GAKFPIKWT 172
Query: 233 AP 234
AP
Sbjct: 173 AP 174
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 38/215 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA----- 86
+FP L+ E+ + IG+G +G V+KG L +D+ VVA+K + L
Sbjct: 7 EFPKSRLPTLADNEIEYEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 87 --FRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTND 144
F+ F E + N+ H N+ K+ + + +V E++ G D H+ D
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR-------MVMEFVPCG---DLYHRLLD 114
Query: 145 HLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDN-----DMVAHVG 199
K S+ ++ + +D+A IEY+ N PP+VH D++ N+ L + + A V
Sbjct: 115 KAHPIKWSV--KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 200 DFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
DFGLS+ ++ S G+ G ++AP
Sbjct: 172 DFGLSQ-----------QSVHSVSGLLGNFQWMAP 195
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V EYMENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGLS+ L D + A T I I+ T
Sbjct: 189 SDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V EYMENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGLS+ L D + A T I I+ T
Sbjct: 189 SDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 28/184 (15%)
Query: 54 IGQGSYGSVYKG-ILGEDEMVVAVKVINLKQKGAF--RSFVAECEALRNIRHRNLTKIIT 110
IG G +G V+ G L +D+ VA+K I ++GA F+ E E + + H L ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+C LVFE+ME+G L D+L L + + +DV + YL
Sbjct: 70 VCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYL 119
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
C ++H D+ N L+ + V V DFG+++F+ D +SS G K V
Sbjct: 120 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVK 169
Query: 231 YVAP 234
+ +P
Sbjct: 170 WASP 173
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V EYMENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGLS+ L D + A T I I+ T
Sbjct: 189 SDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 23 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 82
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V EYMENGSL+ +
Sbjct: 83 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 134
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 135 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 186
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGLS+ L D + A T I I+ T
Sbjct: 187 SDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 28/184 (15%)
Query: 54 IGQGSYGSVYKG-ILGEDEMVVAVKVINLKQKGAF--RSFVAECEALRNIRHRNLTKIIT 110
IG G +G V+ G L +D+ VA+K I ++GA F+ E E + + H L ++
Sbjct: 18 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+C LVFE+ME+G L D+L L + + +DV + YL
Sbjct: 73 VCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYL 122
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
C ++H D+ N L+ + V V DFG+++F+ D +SS G K V
Sbjct: 123 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVK 172
Query: 231 YVAP 234
+ +P
Sbjct: 173 WASP 176
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 28/184 (15%)
Query: 54 IGQGSYGSVYKG-ILGEDEMVVAVKVINLKQKGAF--RSFVAECEALRNIRHRNLTKIIT 110
IG G +G V+ G L +D+ VA+K I ++GA F+ E E + + H L ++
Sbjct: 13 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+C LVFE+ME+G L D+L L + + +DV + YL
Sbjct: 68 VCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYL 117
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
C ++H D+ N L+ + V V DFG+++F+ D +SS G K V
Sbjct: 118 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVK 167
Query: 231 YVAP 234
+ +P
Sbjct: 168 WASP 171
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 48 FSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL----KQKGAFRSFVAECEALRNI 100
S ++G G +G V G L + E+ VA+K + + KQ+ R F+ E +
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIMGQF 91
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
H N+ ++ + + SK +V EYMENGSL+ +L + + V IQ V +
Sbjct: 92 DHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSFLRKHDAQFTV-----IQLVGML 141
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPS 220
+AS ++YL VH D+ N+L+++++V V DFGLS+ L D + A T
Sbjct: 142 RGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-EAAYTTRG 197
Query: 221 SSIGIKGT 228
I I+ T
Sbjct: 198 GKIPIRWT 205
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 24/187 (12%)
Query: 49 SQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL----KQKGAFRSFVAECEALRNIR 101
S ++G G +G V G L + E+ VA+K + + KQ+ R F+ E +
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFD 75
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H N+ ++ + + SK +V EYMENGSL+ +L + + V IQ V +
Sbjct: 76 HPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSFLRKHDAQFTV-----IQLVGMLR 125
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
+AS ++YL VH D+ N+L+++++V V DFGLS+ L D + A T
Sbjct: 126 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-EAAYTTRGG 181
Query: 222 SIGIKGT 228
I I+ T
Sbjct: 182 KIPIRWT 188
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V EYMENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGLS+ L D + A T I I+ T
Sbjct: 189 SDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V EYMENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGLS+ L D + A T I I+ T
Sbjct: 189 SDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 19 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L +T +L L Q V++A +AS + Y+
Sbjct: 77 E------EPIYIVTEYMSKGSLLDFLKGETGKYL-----RLPQLVDMAAQIASGMAYVER 125
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + +
Sbjct: 126 MN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWT 175
Query: 233 AP 234
AP
Sbjct: 176 AP 177
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA----- 86
+FP L+ E+ + IG+G +G V+KG L +D+ VVA+K + L
Sbjct: 7 EFPKSRLPTLADNEIEYEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 87 --FRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTND 144
F+ F E + N+ H N+ K+ + + +V E++ G D H+ D
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR-------MVMEFVPCG---DLYHRLLD 114
Query: 145 HLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDN-----DMVAHVG 199
K S+ ++ + +D+A IEY+ N PP+VH D++ N+ L + + A V
Sbjct: 115 KAHPIKWSV--KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 200 DFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
DFG T+ ++ S G+ G ++AP
Sbjct: 172 DFG-----------TSQQSVHSVSGLLGNFQWMAP 195
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L L L Q V++A +AS + Y+
Sbjct: 84 E------EPIYIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + D+ TA + G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQ------GAKFPIKWTA 183
Query: 234 P 234
P
Sbjct: 184 P 184
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L +T +L L Q V++A +AS + Y+
Sbjct: 250 E------EPIYIVTEYMSKGSLLDFLKGETGKYLR-----LPQLVDMAAQIASGMAYVER 298
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL++ + D+ TA + G K + +
Sbjct: 299 MN---YVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQ------GAKFPIKWT 348
Query: 233 AP 234
AP
Sbjct: 349 AP 350
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ IRH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L L L Q V++A +AS + Y+
Sbjct: 84 E------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 234 P 234
P
Sbjct: 184 P 184
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L +T +L L Q V++A +AS + Y+
Sbjct: 250 E------EPIYIVTEYMSKGSLLDFLKGETGKYLR-----LPQLVDMAAQIASGMAYVER 298
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL++ + D+ TA + G K + +
Sbjct: 299 MN---YVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQ------GAKFPIKWT 348
Query: 233 AP 234
AP
Sbjct: 349 AP 350
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 275 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L +T +L L Q V++A +AS + Y+
Sbjct: 333 E------EPIYIVTEYMSKGSLLDFLKGETGKYLR-----LPQLVDMAAQIASGMAYVER 381
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL++ + D+ TA + G K + +
Sbjct: 382 MN---YVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQ------GAKFPIKWT 431
Query: 233 AP 234
AP
Sbjct: 432 AP 433
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L L L Q V++A +AS + Y+
Sbjct: 84 E------EPIYIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + D+ TA + G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQ------GAKFPIKWTA 183
Query: 234 P 234
P
Sbjct: 184 P 184
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V EYMENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGL++ L D + A T I I+ T
Sbjct: 189 SDFGLARVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L +T +L L Q V+++ +AS + Y+
Sbjct: 81 E------EPIYIVTEYMNKGSLLDFLKGETGKYL-----RLPQLVDMSAQIASGMAYVER 129
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + +
Sbjct: 130 MN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEW-------TARQGAKFPIKWT 179
Query: 233 AP 234
AP
Sbjct: 180 AP 181
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 28/184 (15%)
Query: 54 IGQGSYGSVYKG-ILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIIT 110
IG G +G V+ G L +D+ VA+K I ++G+ F+ E E + + H L ++
Sbjct: 35 IGSGQFGLVHLGYWLNKDK--VAIKTI---KEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+C LVFE+ME+G L D+L L + + +DV + YL
Sbjct: 90 VCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYL 139
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
C ++H D+ N L+ + V V DFG+++F+ D +SS G K V
Sbjct: 140 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVK 189
Query: 231 YVAP 234
+ +P
Sbjct: 190 WASP 193
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L +T +L L Q V++A +AS + Y+
Sbjct: 250 E------EPIYIVGEYMSKGSLLDFLKGETGKYLR-----LPQLVDMAAQIASGMAYVER 298
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL++ + D+ TA + G K + +
Sbjct: 299 MN---YVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQ------GAKFPIKWT 348
Query: 233 AP 234
AP
Sbjct: 349 AP 350
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 15 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L L L Q V++A +AS + Y+
Sbjct: 73 E------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 122
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + + A
Sbjct: 123 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 172
Query: 234 P 234
P
Sbjct: 173 P 173
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA----- 86
+FP L+ E+ + IG+G +G V+KG L +D+ VVA+K + L
Sbjct: 7 EFPKSRLPTLADNEIEYEKQ--IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 87 --FRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTND 144
F+ F E + N+ H N+ K+ + + +V E++ G D H+ D
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR-------MVMEFVPCG---DLYHRLLD 114
Query: 145 HLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDN-----DMVAHVG 199
K S+ ++ + +D+A IEY+ N PP+VH D++ N+ L + + A V
Sbjct: 115 KAHPIKWSV--KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 200 DFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
DF LS+ ++ S G+ G ++AP
Sbjct: 172 DFSLSQ-----------QSVHSVSGLLGNFQWMAP 195
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 17 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L L L Q V++A +AS + Y+
Sbjct: 75 E------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 124
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + + A
Sbjct: 125 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 174
Query: 234 P 234
P
Sbjct: 175 P 175
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLH-QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L +T +L L Q V+++ +AS + Y+
Sbjct: 81 E------EPIYIVTEYMNKGSLLDFLKGETGKYL-----RLPQLVDMSAQIASGMAYVER 129
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + +
Sbjct: 130 MN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWT 179
Query: 233 AP 234
AP
Sbjct: 180 AP 181
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V EYMENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGL + L D + A T I I+ T
Sbjct: 189 SDFGLGRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L L L Q V++A +AS + Y+
Sbjct: 84 E------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 234 P 234
P
Sbjct: 184 P 184
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 54 IGQGSYGSV-----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKI 108
+G+G++G V Y +D+++VAVK + A + F E E L N++H ++ K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF-------KLSLIQRVNIAI 161
+C D +VFEYM++G L +L + +L+ Q ++IA
Sbjct: 81 YGVCVE-----GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK-FLSSDHLDTASET 218
+A+ + YL VH D+ N L+ +++ +GDFG+S+ S+D+ T
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L L L Q V++A +AS + Y+
Sbjct: 84 E------EPIYIVCEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 234 P 234
P
Sbjct: 184 P 184
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGA-FRSFVAECEALRNIRHRNLTKI 108
+G+G +G V Y VAVK + + G E E LRN+ H N+ K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
IC+ G + L+ E++ +GSL+++L + + K++L Q++ A+ + ++
Sbjct: 89 KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 140
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
YL VH D+ NVL++++ +GDFGL+K + +D
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 37/214 (17%)
Query: 37 SYAELSKATCEFSQS---------NMIGQGSYGSVYKGIL---GEDEMVVAVKVINL--- 81
+Y + ++A +F++ +IG G +G V G L G+ ++ VA+K + +
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 82 -KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
KQ+ R F+ E + H N+ + + ++G +V E+MENG+L+ +L
Sbjct: 85 EKQR---RDFLCEASIMGQFDHPNVVHL----EGVVTRGKPV-MIVIEFMENGALDAFLR 136
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
+ + + ++IQ V + +A+ + YL VH D+ N+L+++++V V D
Sbjct: 137 KHDG-----QFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSD 188
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
FGLS+ + D E ++ G K V + AP
Sbjct: 189 FGLSRVIEDD-----PEAVYTTTGGKIPVRWTAP 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGA-FRSFVAECEALRNIRHRNLTKI 108
+G+G +G V Y VAVK + + G E E LRN+ H N+ K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
IC+ G + L+ E++ +GSL+++L + + K++L Q++ A+ + ++
Sbjct: 77 KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 128
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
YL VH D+ NVL++++ +GDFGL+K + +D
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 167
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 54 IGQGSYGSVY----KGILGE-DEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKI 108
+G+G++G V+ +L E D+M+VAVK + + A + F E E L ++H+++ +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF---------KLSLIQRVNI 159
+C ++G +VFEYM +G L +L ++ L L Q + +
Sbjct: 109 FGVC----TEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK-FLSSDHLDTASET 218
A VA+ + YL VH D+ N L+ +V +GDFG+S+ S+D+ T
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDE---MVVAVKVI--NLKQKGAFRSFVAECEALRNIR 101
+F+ M+G+G +GSV + L +++ + VAVK++ ++ F+ E ++
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 102 HRNLTKIITICSSIDSKGA-DFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
H ++ K++ + +KG ++ +M++G L +L + F L L V
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDT--ASE 217
+D+A +EYL +H D+ N +L DM V DFGLS K S D+ AS+
Sbjct: 144 VDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 218 TPSSSIGIK 226
P + ++
Sbjct: 201 LPVKWLALE 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 193 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFK-LSLIQRVNIAIDVASAIEYLHH 172
+ +V EYM GSL D+L E+ K L L Q V++A +AS + Y+
Sbjct: 251 E------EPIYIVTEYMSKGSLLDFLKG-----EMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
VH D++ +N+L+ ++V V DFGL + + D+ TA + G K + +
Sbjct: 300 MN---YVHRDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQ------GAKFPIKWT 349
Query: 233 AP 234
AP
Sbjct: 350 AP 351
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 54 IGQGSYGSVY----KGILGE-DEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKI 108
+G+G++G V+ +L E D+M+VAVK + + A + F E E L ++H+++ +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF---------KLSLIQRVNI 159
+C ++G +VFEYM +G L +L ++ L L Q + +
Sbjct: 86 FGVC----TEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK-FLSSDHLDTASET 218
A VA+ + YL VH D+ N L+ +V +GDFG+S+ S+D+ T
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 54 IGQGSYGSVY----KGILGE-DEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKI 108
+G+G++G V+ +L E D+M+VAVK + + A + F E E L ++H+++ +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF---------KLSLIQRVNI 159
+C ++G +VFEYM +G L +L ++ L L Q + +
Sbjct: 80 FGVC----TEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK-FLSSDHLDTASET 218
A VA+ + YL VH D+ N L+ +V +GDFG+S+ S+D+ T
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 28/184 (15%)
Query: 54 IGQGSYGSVYKG-ILGEDEMVVAVKVINLKQKGAF--RSFVAECEALRNIRHRNLTKIIT 110
IG G +G V+ G L +D+ VA+K I ++GA F+ E E + + H L ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+C LVFE+ME+G L D+L L + + +DV + YL
Sbjct: 70 VCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYL 119
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
+ ++H D+ N L+ + V V DFG+++F+ D +SS G K V
Sbjct: 120 E---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVK 169
Query: 231 YVAP 234
+ +P
Sbjct: 170 WASP 173
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM G L D+L L L Q V++A +AS + Y+
Sbjct: 84 E------EPIYIVMEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 234 P 234
P
Sbjct: 184 P 184
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V E MENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEXMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGLS+ L D + A T I I+ T
Sbjct: 189 SDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L L L Q V++A +AS + Y+
Sbjct: 84 E------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D+ +N+L+ ++V V DFGL++ + + ++ G K + + A
Sbjct: 134 N---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 234 P 234
P
Sbjct: 184 P 184
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 26/180 (14%)
Query: 51 SNMIGQGSYGSVYKGILGEDEMV---VAVKVINLKQKGAFRSFVA----ECEALRNIRHR 103
+ +G G++G V +GE ++ VAVK++N +QK V E + L+ RH
Sbjct: 16 GDTLGVGTFGKVK---IGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
++ K+ + S+ DF +V EY+ G L D++ + E+ L Q++
Sbjct: 72 HIIKLYQVIST----PTDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI------ 120
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS-SDHLDTASETPSSS 222
SA++Y H + +VH D+KP NVLLD M A + DFGLS +S + L T+ +P+ +
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 54 IGQGSYGSVYKG-ILGEDEMVVAVKVINLKQKGAF--RSFVAECEALRNIRHRNLTKIIT 110
IG G +G V+ G L +D+ VA+K I ++GA F+ E E + + H L ++
Sbjct: 16 IGSGQFGLVHLGYWLNKDK--VAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+C LV E+ME+G L D+L L + + +DV + YL
Sbjct: 71 VCLEQAPI-----CLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYL 120
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
C ++H D+ N L+ + V V DFG+++F+ D +SS G K V
Sbjct: 121 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGTKFPVK 170
Query: 231 YVAP 234
+ +P
Sbjct: 171 WASP 174
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLTKI 108
+G+G +G V Y +VAVK + RS + E + LR + H ++ K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
C + GA LV EY+ GSL D+L + + + L Q + A + +
Sbjct: 99 KGCC---EDAGAASLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 148
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
YLH +H D+ NVLLDND + +GDFGL+K + H
Sbjct: 149 YLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 28 PMEKQFPMVSYAELSKA--TCEFSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL- 81
P + P + E +K S ++G G +G V G L + E+ VA+K + +
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 82 ---KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
KQ+ R F+ E + H N+ ++ + + SK +V E MENGSL+ +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEXMENGSLDSF 136
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L + + V IQ V + +AS ++YL VH D+ N+L+++++V V
Sbjct: 137 LRKHDAQFTV-----IQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKV 188
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
DFGLS+ L D + A T I I+ T
Sbjct: 189 SDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 48 FSQSNMIGQGSYGSVYKGIL---GEDEMVVAVKVINL----KQKGAFRSFVAECEALRNI 100
S ++G G +G V G L + E+ VA+K + + KQ+ R F+ E +
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIMGQF 74
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
H N+ ++ + + SK +V E MENGSL+ +L + + V IQ V +
Sbjct: 75 DHPNIIRLEGVVTK--SKPV---MIVTEXMENGSLDSFLRKHDAQFTV-----IQLVGML 124
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPS 220
+AS ++YL VH D+ N+L+++++V V DFGLS+ L D + A T
Sbjct: 125 RGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-EAAYTTRG 180
Query: 221 SSIGIKGT 228
I I+ T
Sbjct: 181 GKIPIRWT 188
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+GQG +G V+ G VA+K + +F+ E + ++ +RH L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM G L D+L L L Q V++A +AS + Y+
Sbjct: 84 E------EPIYIVTEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
VH D++ +N+L+ ++V V DFGL++ + + ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 234 P 234
P
Sbjct: 184 P 184
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 84 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 133
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTARE------GAKFPIKWT 183
Query: 233 AP 234
AP
Sbjct: 184 AP 185
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 29 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 86 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 135
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 136 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTARE------GAKFPIKWT 185
Query: 233 AP 234
AP
Sbjct: 186 AP 187
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 30 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 87 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 136
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 137 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTARE------GAKFPIKWT 186
Query: 233 AP 234
AP
Sbjct: 187 AP 188
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 78 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTARE------GAKFPIKWT 177
Query: 233 AP 234
AP
Sbjct: 178 AP 179
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 26/193 (13%)
Query: 23 PIDTLPMEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGI-LGEDEMV---VAVKV 78
P T P + Q ++ EL + ++G G++G+VYKGI + E E V VA+K+
Sbjct: 22 PSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKI 74
Query: 79 IN-LKQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED 137
+N A F+ E + ++ H +L +++ +C S + LV + M +G L +
Sbjct: 75 LNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLE 128
Query: 138 WLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
++H+ D++ L +N + +A + YL +VH D+ NVL+ +
Sbjct: 129 YVHEHKDNIGSQLL-----LNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVK 180
Query: 198 VGDFGLSKFLSSD 210
+ DFGL++ L D
Sbjct: 181 ITDFGLARLLEGD 193
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 23 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 80 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 129
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 130 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTARE------GAKFPIKWT 179
Query: 233 AP 234
AP
Sbjct: 180 AP 181
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 29/173 (16%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK-----GAFRSFVAECEALRNIR 101
+ + + +G+G + +VYK +VA+K I L + G R+ + E + L+ +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLE-----DWLHQTNDHLEVFKLSLIQR 156
H N II + + K +LVF++ME LE + L T H++ + L +Q
Sbjct: 71 HPN---IIGLLDAFGHKSN--ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQ- 123
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+EYLH + ++H D+KP+N+LLD + V + DFGL+K S
Sbjct: 124 ---------GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 78 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTARE------GAKFPIKWT 177
Query: 233 AP 234
AP
Sbjct: 178 AP 179
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 22 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 79 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 128
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 129 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTARE------GAKFPIKWT 178
Query: 233 AP 234
AP
Sbjct: 179 AP 180
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 30/211 (14%)
Query: 29 MEKQFPMVSYAE----LSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M+ Q P + E + + T + + +G G +G V+ G VAVK +LKQ
Sbjct: 4 MQTQKPQKPWWEDEWEVPRETLKLVER--LGAGQFGEVWMGYYN-GHTKVAVK--SLKQG 58
Query: 85 G-AFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN 143
+ +F+AE ++ ++H+ L ++ + + + ++ EYMENGSL D+L +
Sbjct: 59 SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPS 112
Query: 144 DHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGL 203
KL++ + +++A +A + ++ +H D++ +N+L+ + + + DFGL
Sbjct: 113 G----IKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGL 165
Query: 204 SKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
++ + D+ TA E G K + + AP
Sbjct: 166 ARLI-EDNEYTARE------GAKFPIKWTAP 189
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 84 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 133
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTARE------GAKFPIKWT 183
Query: 233 AP 234
AP
Sbjct: 184 AP 185
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 26 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 83 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 132
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 133 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTARE------GAKFPIKWT 182
Query: 233 AP 234
AP
Sbjct: 183 AP 184
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 25/165 (15%)
Query: 51 SNMIGQGSYGSVYKGILGEDEMV---VAVKVINLKQKGAFRSFVA----ECEALRNIRHR 103
+ +G G++G V +GE ++ VAVK++N +QK V E + L+ RH
Sbjct: 16 GDTLGVGTFGKVK---IGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
++ K+ + S+ DF +V EY+ G L D++ + E+ L Q++
Sbjct: 72 HIIKLYQVIST----PTDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI------ 120
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
SA++Y H + +VH D+KP NVLLD M A + DFGLS +S
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIITI 111
IG+G +G V++G +E VAVK+ + +++ RS+ E E + + RH N+ I
Sbjct: 37 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 90
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ D+ LV +Y E+GSL D+L++ + +++ + +A+ AS + +LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-------YTVTVEGMIKLALSTASGLAHLH 143
Query: 172 HNC-----QPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+P + H D+K N+L+ + + D GL+ S DT P+ +G K
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-TDTIDIAPNHRVGTK 202
Query: 227 GTVGYVAP 234
Y+AP
Sbjct: 203 ---RYMAP 207
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIITI 111
IG+G +G V++G +E VAVK+ + +++ RS+ E E + + RH N+ I
Sbjct: 12 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 65
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ D+ LV +Y E+GSL D+L++ + +++ + +A+ AS + +LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-------YTVTVEGMIKLALSTASGLAHLH 118
Query: 172 HNC-----QPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+P + H D+K N+L+ + + D GL+ S DT P+ +G K
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-TDTIDIAPNHRVGTK 177
Query: 227 GTVGYVAP 234
Y+AP
Sbjct: 178 ---RYMAP 182
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIITI 111
IG+G +G V++G +E VAVK+ + +++ RS+ E E + + RH N+ I
Sbjct: 17 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 70
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ D+ LV +Y E+GSL D+L++ + +++ + +A+ AS + +LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-------YTVTVEGMIKLALSTASGLAHLH 123
Query: 172 HNC-----QPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+P + H D+K N+L+ + + D GL+ S DT P+ +G K
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-TDTIDIAPNHRVGTK 182
Query: 227 GTVGYVAP 234
Y+AP
Sbjct: 183 ---RYMAP 187
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 78 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTARE------GAKFPIKWT 177
Query: 233 AP 234
AP
Sbjct: 178 AP 179
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIITI 111
IG+G +G V++G +E VAVK+ + +++ RS+ E E + + RH N+ I
Sbjct: 11 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 64
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ D+ LV +Y E+GSL D+L++ + +++ + +A+ AS + +LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-------YTVTVEGMIKLALSTASGLAHLH 117
Query: 172 HNC-----QPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+P + H D+K N+L+ + + D GL+ S DT P+ +G K
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-TDTIDIAPNHRVGTK 176
Query: 227 GTVGYVAP 234
Y+AP
Sbjct: 177 ---RYMAP 181
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIITI 111
IG+G +G V++G +E VAVK+ + +++ RS+ E E + + RH N+ I
Sbjct: 14 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 67
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ D+ LV +Y E+GSL D+L++ + +++ + +A+ AS + +LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-------YTVTVEGMIKLALSTASGLAHLH 120
Query: 172 HNC-----QPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+P + H D+K N+L+ + + D GL+ S DT P+ +G K
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-TDTIDIAPNHRVGTK 179
Query: 227 GTVGYVAP 234
Y+AP
Sbjct: 180 ---RYMAP 184
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 16 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 73 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 123 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTARE------GAKFPIKWT 172
Query: 233 AP 234
AP
Sbjct: 173 AP 174
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIITI 111
IG+G +G V++G +E VAVK+ + +++ RS+ E E + + RH N+ I
Sbjct: 50 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 103
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ D+ LV +Y E+GSL D+L++ + +++ + +A+ AS + +LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-------YTVTVEGMIKLALSTASGLAHLH 156
Query: 172 HNC-----QPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+P + H D+K N+L+ + + D GL+ S DT P+ +G K
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS-ATDTIDIAPNHRVGTK 215
Query: 227 GTVGYVAP 234
Y+AP
Sbjct: 216 ---RYMAP 220
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 51 SNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLTK 107
++IG+G++G V K + +D + + + +K+ K R F E E L + H
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PN 77
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLH-----QTNDHLEVFK-----LSLIQRV 157
II + + + +G + L EY +G+L D+L +T+ + LS Q +
Sbjct: 78 IINLLGACEHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ A DVA ++YL Q +H D+ N+L+ + VA + DFGLS+
Sbjct: 136 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 51 SNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLTK 107
++IG+G++G V K + +D + + + +K+ K R F E E L + H
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH--PN 87
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLH-----QTNDHLEVFK-----LSLIQRV 157
II + + + +G + L EY +G+L D+L +T+ + LS Q +
Sbjct: 88 IINLLGACEHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ A DVA ++YL Q +H D+ N+L+ + VA + DFGLS+
Sbjct: 146 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 26/188 (13%)
Query: 55 GQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICSS 114
+G +G V+K L + VAVK+ ++ K ++++ E +L ++H N+ + I
Sbjct: 33 ARGRFGCVWKAQLLNE--YVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGAEKR 89
Query: 115 IDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNC 174
S D L+ + E GSL +D L+ +S + +IA +A + YLH +
Sbjct: 90 GTSVDVDL-WLITAFHEKGSL-------SDFLKANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 175 -------QPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETPSSSIGIK 226
+P + H DIK NVLL N++ A + DFGL+ KF A ++ + G
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF-------EAGKSAGDTHGQV 194
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 195 GTRRYMAP 202
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G +G V+ G + VA+K + SF+ E + ++ ++H L ++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGN-TKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ +V EYM GSL D+L E L L V++A VA+ + Y+
Sbjct: 75 E------EPIYIVTEYMNKGSLLDFLKDG----EGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
+H D++ +N+L+ N ++ + DFGL++ + D+ TA + G K + + A
Sbjct: 125 N---YIHRDLRSANILVGNGLICKIADFGLARLI-EDNEXTARQ------GAKFPIKWTA 174
Query: 234 P 234
P
Sbjct: 175 P 175
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 96 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+++L VH D+ N +LD V DFGL++ D LD ++ + G K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMLDKEFDSVHNKTGAK 199
Query: 227 GTVGYVA 233
V ++A
Sbjct: 200 LPVKWMA 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 51/219 (23%)
Query: 43 KATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRH 102
+ +F + ++GQG++G V K D A+K I ++ + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNH 61
Query: 103 -------------RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH------QTN 143
RN K +T ++ K F + EY ENG+L D +H Q +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMT---AVKKKSTLF--IQMEYCENGTLYDLIHSENLNQQRD 116
Query: 144 DHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGL 203
++ +F+ + A+ Y+H ++H D+KP N+ +D +GDFGL
Sbjct: 117 EYWRLFR-----------QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162
Query: 204 SK---------FLSSDHLDTASETPSSSIGIKGTVGYVA 233
+K L S +L +S+ +S+I GT YVA
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAI---GTAMYVA 198
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV---VAVKVIN-LKQKGAFRSFVAECEALRNIR 101
E + ++G G++G+VYKGI + E E V VA+K++N A F+ E + ++
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H +L +++ +C S + LV + M +G L +++H+ D++ L +N +
Sbjct: 76 HPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWCV 124
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+A + YL +VH D+ NVL+ + + DFGL++ L D
Sbjct: 125 QIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 170
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLTKI 108
+G+G +G V Y +VAVK + RS + E + LR + H ++ K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
C + +G LV EY+ GSL D+L + + + L Q + A + +
Sbjct: 82 KGCC---EDQGEKSLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
YLH +H ++ NVLLDND + +GDFGL+K + H
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 18 GSVRKPIDTLPMEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVK 77
G++ + + P +P++ + ++ ++IG+G++G V K + +D + +
Sbjct: 1 GALNRKVKNNPDPTIYPVLDWNDIKF-------QDVIGEGNFGQVLKARIKKDGLRMDAA 53
Query: 78 VINLKQ---KGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGS 134
+ +K+ K R F E E L + H II + + + +G + L EY +G+
Sbjct: 54 IKRMKEYASKDDHRDFAGELEVLCKLGHH--PNIINLLGACEHRG--YLYLAIEYAPHGN 109
Query: 135 LEDWLH-----QTNDHLEVFK-----LSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIK 184
L D+L +T+ + LS Q ++ A DVA ++YL Q +H ++
Sbjct: 110 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLA 166
Query: 185 PSNVLLDNDMVAHVGDFGLSK 205
N+L+ + VA + DFGLS+
Sbjct: 167 ARNILVGENYVAKIADFGLSR 187
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 94 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEXXSVHNKTGAK 197
Query: 227 GTVGYVA 233
V ++A
Sbjct: 198 LPVKWMA 204
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 54 IGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLTKI 108
+G+G +G V Y +VAVK + RS + E + LR + H ++ K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
C + +G LV EY+ GSL D+L + + + L Q + A + +
Sbjct: 82 KGCC---EDQGEKSLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
YLH +H ++ NVLLDND + +GDFGL+K + H
Sbjct: 132 YLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA-ECEALRNIRHRNL 105
+F +G+G +G V++ D+ A+K I L + R V E +AL + H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 106 TKIIT--ICSSIDSKGADFKALVFEYME-----NGSLEDWLHQTNDHLEVFKLSLIQRVN 158
+ + + K V+ Y++ +L+DW+ N + + ++
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERSVCLH 122
Query: 159 IAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASET 218
I + +A A+E+LH ++H D+KPSN+ D V VGDFGL + D + T
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 219 P----SSSIGIKGTVGYVAP 234
P + G GT Y++P
Sbjct: 180 PMPAYARHTGQVGTKLYMSP 199
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINL-KQKGAFRSFVAECEALRNIRH 102
++ +F Q +G G+Y +VYKG+ + VA+K + L ++G + + E ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWL--HQTNDHLEVFKLSLIQRVNIA 160
N+ ++ + + + LVFE+M+N L+ ++ + +L+L++
Sbjct: 63 ENIVRLYDVIHTENK-----LTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H N ++H D+KP N+L++ +GDFGL++
Sbjct: 117 L--LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIITI 111
+G G +G V G + VA+K+I ++G+ F+ E + + N+ H L ++ +
Sbjct: 16 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C+ + F ++ EYM NG L ++L + + +L + + DV A+EYL
Sbjct: 72 CTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 121
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+H D+ N L+++ V V DFGLS+++ D +SS+G K V +
Sbjct: 122 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRW 171
Query: 232 VAP 234
P
Sbjct: 172 SPP 174
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 21 LGAGQAGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 78 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H D++ +N+L+ + + + DFGL++ + D TA E G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTARE------GAKFPIKWT 177
Query: 233 AP 234
AP
Sbjct: 178 AP 179
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 24/182 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLTKIITIC 112
+G G +G V+ G VAVK +LKQ + +F+AE ++ ++H+ L ++ +
Sbjct: 17 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + ++ EYMENGSL D+L + KL++ + +++A +A + ++
Sbjct: 74 TQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+H +++ +N+L+ + + + DFGL++ + D+ TA E G K + +
Sbjct: 124 RN---YIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTARE------GAKFPIKWT 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVI------NLKQKGAFRSFVAECEALRNIRHRNLTK 107
IG+G++G V+ G L D +VAVK +LK K F+ E L+ H N+ +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPNIVR 176
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+I +C+ +V E ++ G +L L V +L+Q V D A+ +
Sbjct: 177 LIGVCTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRV--KTLLQMVG---DAAAGM 226
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
EYL C +H D+ N L+ V + DFG+S+ + A ++S G++
Sbjct: 227 EYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-------EEADGVXAASGGLRQ 276
Query: 228 T-VGYVAP 234
V + AP
Sbjct: 277 VPVKWTAP 284
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 93 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+++L VH D+ N +LD V DFGL++ + D+ + + +K
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 95 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+++L VH D+ N +LD V DFGL++ + D+ + + +K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 100 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 150
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+++L VH D+ N +LD V DFGL++ + D+ + + +K
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 154 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 204
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+++L VH D+ N +LD V DFGL++ + D+ + + +K
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 95 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+++L VH D+ N +LD V DFGL++ + D+ + + +K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIITI 111
+G G +G V G + VA+K+I ++G+ F+ E + + N+ H L ++ +
Sbjct: 12 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C+ + F ++ EYM NG L ++L + + +L + + DV A+EYL
Sbjct: 68 CTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 117
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+H D+ N L+++ V V DFGLS+++ D +SS+G K V +
Sbjct: 118 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRW 167
Query: 232 VAP 234
P
Sbjct: 168 SPP 170
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 96 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+++L VH D+ N +LD V DFGL++ + D+ + + +K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 95 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 198
Query: 227 GTVGYVA 233
V ++A
Sbjct: 199 LPVKWMA 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVI------NLKQKGAFRSFVAECEALRNIRHRNLTK 107
IG+G++G V+ G L D +VAVK +LK K F+ E L+ H N+ +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPNIVR 176
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+I +C+ +V E ++ G +L L V +L+Q V D A+ +
Sbjct: 177 LIGVCTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRV--KTLLQMVG---DAAAGM 226
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
EYL C +H D+ N L+ V + DFG+S+
Sbjct: 227 EYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIITI 111
+G G +G V G + VA+K+I ++G+ F+ E + + N+ H L ++ +
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C+ + F ++ EYM NG L ++L + + +L + + DV A+EYL
Sbjct: 88 CTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 137
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+H D+ N L+++ V V DFGLS+++ D +SS+G K V +
Sbjct: 138 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRW 187
Query: 232 VAP 234
P
Sbjct: 188 SPP 190
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 87 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 137
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 190
Query: 227 GTVGYVA 233
V ++A
Sbjct: 191 LPVKWMA 197
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIITI 111
+G G +G V G + VA+K+I ++G+ F+ E + + N+ H L ++ +
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C+ + F ++ EYM NG L ++L + + +L + + DV A+EYL
Sbjct: 73 CTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 122
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+H D+ N L+++ V V DFGLS+++ D +SS+G K V +
Sbjct: 123 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRW 172
Query: 232 VAP 234
P
Sbjct: 173 SPP 175
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIITI 111
+G G +G V G + VA+K+I ++G+ F+ E + + N+ H L ++ +
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C+ + F ++ EYM NG L ++L + + +L + + DV A+EYL
Sbjct: 88 CTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 137
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+H D+ N L+++ V V DFGLS+++ D +SS+G K V +
Sbjct: 138 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-------ETSSVGSKFPVRW 187
Query: 232 VAP 234
P
Sbjct: 188 SPP 190
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 114 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 164
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 217
Query: 227 GTVGYVA 233
V ++A
Sbjct: 218 LPVKWMA 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 90 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 140
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 193
Query: 227 GTVGYVA 233
V ++A
Sbjct: 194 LPVKWMA 200
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 93 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 196
Query: 227 GTVGYVA 233
V ++A
Sbjct: 197 LPVKWMA 203
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 92 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 142
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 195
Query: 227 GTVGYVA 233
V ++A
Sbjct: 196 LPVKWMA 202
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRN 104
++ + IGQG++G V+K + VA+K + ++ ++G + + E + L+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 105 LTKIITICSSIDSKGADFKA---LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ +I IC + S KA LVF++ E+ D ++ L F LS I+RV +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEH----DLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ + Y+H N ++H D+K +NVL+ D V + DFGL++ S
Sbjct: 135 --LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIITI 111
+G G +G V G + VA+K+I ++G+ F+ E + + N+ H L ++ +
Sbjct: 23 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C+ + F ++ EYM NG L ++L + + +L + + DV A+EYL
Sbjct: 79 CTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 128
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+H D+ N L+++ V V DFGLS+++ D +SS+G K V +
Sbjct: 129 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRW 178
Query: 232 VAP 234
P
Sbjct: 179 SPP 181
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 54 IGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLTK 107
+G+G +G V G EMV AVK + RS + E E LR + H ++ K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMV-AVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
C + +G LV EY+ GSL D+L + + L Q + A + +
Sbjct: 76 YKGCC---EDQGEKSVQLVMEYVPLGSLRDYLPRHC-------VGLAQLLLFAQQICEGM 125
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
YLH +H + NVLLDND + +GDFGL+K + H
Sbjct: 126 AYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 166
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 94 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 197
Query: 227 GTVGYVA 233
V ++A
Sbjct: 198 LPVKWMA 204
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 95 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 198
Query: 227 GTVGYVA 233
V ++A
Sbjct: 199 LPVKWMA 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 54 IGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS-FVAECEALRNIRHRNLTK 107
+G+G +G V G EMV AVK + RS + E E LR + H ++ K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMV-AVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
C + +G LV EY+ GSL D+L + + L Q + A + +
Sbjct: 75 YKGCC---EDQGEKSVQLVMEYVPLGSLRDYLPRHC-------VGLAQLLLFAQQICEGM 124
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
YLH +H + NVLLDND + +GDFGL+K + H
Sbjct: 125 AYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 165
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 29/192 (15%)
Query: 26 TLPMEKQFP---MVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINL- 81
TL + Q P VS A + + + + +G+G+YG VYK I VA+K I L
Sbjct: 11 TLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE 70
Query: 82 -KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
+++G + + E L+ ++HRN II + S I L+FEY EN L+ ++
Sbjct: 71 HEEEGVPGTAIREVSLLKELQHRN---IIELKSVIHHNHR--LHLIFEYAEN-DLKKYMD 124
Query: 141 QTND-HLEVFKLSLIQRVNIAIDVASAIEYLH-HNCQPPMVHGDIKPSNVLL-----DND 193
+ D + V K L Q +N + + H C +H D+KP N+LL
Sbjct: 125 KNPDVSMRVIKSFLYQLIN-------GVNFCHSRRC----LHRDLKPQNLLLSVSDASET 173
Query: 194 MVAHVGDFGLSK 205
V +GDFGL++
Sbjct: 174 PVLKIGDFGLAR 185
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 51 SNMIGQGSYGSVYKGILGEDE---MVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
+ +IG+G +G VY G L +++ + AVK +N + G F+ E +++ H N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ IC + S+G+ +V YM++G L +++ + V L + + VA
Sbjct: 113 SLLGIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 163
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
++YL VH D+ N +LD V DFGL++ D D + + G K
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAK 216
Query: 227 GTVGYVA 233
V ++A
Sbjct: 217 LPVKWMA 223
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIR 101
AT + IG G+YG+VYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 102 ---HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVN 158
H N+ +++ +C++ + LVFE+++ L +L D L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 159 IAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ +++LH NC +VH D+KP N+L+ + + DFGL++ S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 33/192 (17%)
Query: 55 GQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICSS 114
+G +G V+K L D VAVK+ L+ K +++S E + ++H NL + I +
Sbjct: 24 ARGRFGCVWKAQLMND--FVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFI----A 76
Query: 115 IDSKGADFKA---LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+ +G++ + L+ + + GSL D+L+ ++ + ++A ++ + YLH
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSL-------TDYLKGNIITWNELCHVAETMSRGLSYLH 129
Query: 172 HNC--------QPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETPSSS 222
+ +P + H D K NVLL +D+ A + DFGL+ +F + P +
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRF-------EPGKPPGDT 182
Query: 223 IGIKGTVGYVAP 234
G GT Y+AP
Sbjct: 183 HGQVGTRRYMAP 194
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIR 101
AT + IG G+YG+VYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 102 ---HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVN 158
H N+ +++ +C++ + LVFE+++ L +L D L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 159 IAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ +++LH NC +VH D+KP N+L+ + + DFGL++ S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIR 101
AT + IG G+YG+VYK VA+K + + ++G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 102 ---HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVN 158
H N+ +++ +C++ + LVFE+++ L +L D L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 159 IAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ +++LH NC +VH D+KP N+L+ + + DFGL++ S
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 29 MEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGA 86
M KQ+ V ++ + IGQG++G V+K + VA+K + ++ ++G
Sbjct: 1 MAKQYDSVE-CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 59
Query: 87 FRSFVAECEALRNIRHRNLTKIITICSSIDS-----KGADFKALVFEYMENGSLEDWLHQ 141
+ + E + L+ ++H N+ +I IC + S KG+ + LVF++ E+ D
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY--LVFDFCEH----DLAGL 113
Query: 142 TNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDF 201
++ L F LS I+RV + + + Y+H N ++H D+K +NVL+ D V + DF
Sbjct: 114 LSNVLVKFTLSEIKRVMQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168
Query: 202 GLSKFLS 208
GL++ S
Sbjct: 169 GLARAFS 175
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLTKIITI 111
IGQG++G V+K + VA+K + ++ ++G + + E + L+ ++H N+ +I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 112 CSSIDS-----KGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
C + S KG+ + LVF++ E+ D ++ L F LS I+RV + +
Sbjct: 86 CRTKASPYNRCKGSIY--LVFDFCEH----DLAGLLSNVLVKFTLSEIKRVMQML--LNG 137
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ Y+H N ++H D+K +NVL+ D V + DFGL++ S
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 23 PIDTLPMEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK 82
P D LP +A + ++ ++IG+G V + + AVK++ +
Sbjct: 79 PEDELP--------DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVT 130
Query: 83 QKGAFRSFVAEC-EALRNIRH--RNLTKIITICSSIDS-KGADFKALVFEYMENGSLEDW 138
+ + E EA R H R + I + IDS + + F LVF+ M G L D+
Sbjct: 131 AERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDY 190
Query: 139 LHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
L E LS + +I + A+ +LH N +VH D+KP N+LLD++M +
Sbjct: 191 L------TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRL 241
Query: 199 GDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
DFG S HL+ + + GT GY+AP
Sbjct: 242 SDFGFSC-----HLEPGEKLRE----LCGTPGYLAP 268
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVAECEALRNIRHRN 104
++ + IGQG++G V+K + VA+K + ++ ++G + + E + L+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 105 LTKIITICSSIDS-----KGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
+ +I IC + S KG+ + LVF++ E+ D ++ L F LS I+RV
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIY--LVFDFCEH----DLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ + + Y+H N ++H D+K +NVL+ D V + DFGL++ S
Sbjct: 133 ML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 61
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 116
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 117 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 63
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 70
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 67
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 68 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 76
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 69
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 70
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 69
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 31/167 (18%)
Query: 52 NMIGQGSYGSVYKGILGEDEMV---VAVKVINLKQK-------GAFRSFVAECEALRNIR 101
+ +G G++G V +G+ E+ VAVK++N +QK G R E + L+ R
Sbjct: 22 DTLGVGTFGKVK---VGKHELTGHKVAVKILN-RQKIRSLDVVGKIRR---EIQNLKLFR 74
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H ++ K+ + S+ +D +V EY+ G L D++ + E L Q++
Sbjct: 75 HPHIIKLYQVIST----PSDI-FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI---- 125
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
S ++Y H + +VH D+KP NVLLD M A + DFGLS +S
Sbjct: 126 --LSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 98
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 51/219 (23%)
Query: 43 KATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRH 102
+ +F + ++GQG++G V K D A+K I ++ + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNH 61
Query: 103 -------------RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH------QTN 143
RN K +T ++ K F + EY EN +L D +H Q +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMT---AVKKKSTLF--IQMEYCENRTLYDLIHSENLNQQRD 116
Query: 144 DHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGL 203
++ +F+ + A+ Y+H ++H D+KP N+ +D +GDFGL
Sbjct: 117 EYWRLFR-----------QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162
Query: 204 SK---------FLSSDHLDTASETPSSSIGIKGTVGYVA 233
+K L S +L +S+ +S+I GT YVA
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAI---GTAMYVA 198
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIITI 111
+G G +G V G + VA+K+I ++G+ F+ E + + N+ H L ++ +
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C+ + F ++ EYM NG L ++L + + +L + + DV A+EYL
Sbjct: 73 CTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE 122
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+H D+ N L+++ V V DFGLS+++ D +SS G K V +
Sbjct: 123 SK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSRGSKFPVRW 172
Query: 232 VAP 234
P
Sbjct: 173 SPP 175
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVA-ECEALRNIRHRNLTKIIT 110
+G+GS+G V VA+K+IN K K + + E LR +RH ++ K+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ S D +V EY N L D++ Q + E Q++ SA+EY
Sbjct: 72 VIKSKDEI-----IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYC 119
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS-SDHLDTASETPS 220
H + +VH D+KP N+LLD + + DFGLS ++ + L T+ +P+
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN 167
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVA-ECEALRNIRHRNLTKIIT 110
+G+GS+G V VA+K+IN K K + + E LR +RH ++ K+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ S D +V EY N L D++ Q + E Q++ SA+EY
Sbjct: 81 VIKSKDEI-----IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYC 128
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS-SDHLDTASETPS 220
H + +VH D+KP N+LLD + + DFGLS ++ + L T+ +P+
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN 176
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVA-ECEALRNIRHRNLTKIIT 110
+G+GS+G V VA+K+IN K K + + E LR +RH ++ K+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ S D +V EY N L D++ Q + E Q++ SA+EY
Sbjct: 82 VIKSKDEI-----IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYC 129
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS-SDHLDTASETPS 220
H + +VH D+KP N+LLD + + DFGLS ++ + L T+ +P+
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN 177
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 14 VRRRGSVRKPIDTLPMEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGI-LGEDEM 72
+RR R+ ++ L + P + + K T EF + ++G G++G+VYKG+ + E E
Sbjct: 18 LRRLLQERELVEPLTPSGEAPNQALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEK 76
Query: 73 V-VAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFE 128
V + V ++ L++ A + + E + ++ + ++ +++ IC + + L+ +
Sbjct: 77 VKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQ 130
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
M G L D++ + D++ L +N + +A + YL +VH D+ NV
Sbjct: 131 LMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDRR---LVHRDLAARNV 182
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L+ + DFGL+K L ++ + +E
Sbjct: 183 LVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK--QKGAFRSFVA-ECEALRNIRHRNLTKIIT 110
+G+GS+G V VA+K+IN K K + + E LR +RH ++ K+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ S D +V EY N L D++ Q + E Q++ SA+EY
Sbjct: 76 VIKSKDEI-----IMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYC 123
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS-SDHLDTASETPSSS 222
H + +VH D+KP N+LLD + + DFGLS ++ + L T+ +P+ +
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 173
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVIN---LKQKGAFRSFVAECEALRNIR 101
+ ++G+GS+G V IL +D++ AVKVI+ +KQK S + E + L+ +
Sbjct: 34 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H N+ K+ + KG + LV E G L D + + + S + I
Sbjct: 91 HPNIMKLYEF---FEDKGYFY--LVGEVYTGGELFDEI------ISRKRFSEVDAARIIR 139
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTASET 218
V S I Y+H N +VH D+KP N+LL++ D + DFGL S H + AS+
Sbjct: 140 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFE-ASKK 190
Query: 219 PSSSIGIKGTVGYVAP 234
I GT Y+AP
Sbjct: 191 MKDKI---GTAYYIAP 203
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIR----------HR 103
+G+G+YG V+K I VVAVK I F +F +A R R H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKI-------FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ ++ + + + + LVF+YME LH + L + + + +
Sbjct: 70 NIVNLLNVLRADNDRDV---YLVFDYMETD-----LHAV---IRANILEPVHKQYVVYQL 118
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I+YLH ++H D+KPSN+LL+ + V DFGLS+
Sbjct: 119 IKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 42 SKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR-----SFVAECEA 96
S AT + IG G+YG+VYK VA+K + + G S V E
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 97 LRNIR---HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
LR + H N+ +++ +C++ + LVFE+++ L +L D L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPA 119
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
++ +++LH NC +VH D+KP N+L+ + + DFGL++ S
Sbjct: 120 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 171
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFR---SFV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 63
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +E
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N + D +GDFG+++
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 35/196 (17%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVIN---LKQKGAFRSFVAECEALRNIR 101
+ ++G+GS+G V IL +D++ AVKVI+ +KQK S + E + L+ +
Sbjct: 28 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H N+ K+ + KG + LV E G L D + + + S + I
Sbjct: 85 HPNIMKLYEF---FEDKG--YFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIR 133
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTASET 218
V S I Y+H N +VH D+KP N+LL++ D + DFGLS AS+
Sbjct: 134 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKK 184
Query: 219 PSSSIGIKGTVGYVAP 234
I GT Y+AP
Sbjct: 185 MKDKI---GTAYYIAP 197
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 30/172 (17%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI------NLKQKGAFRSFVAECEALRNI 100
++ ++G+GSYG V K + +VA+K + +K A R E + L+ +
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR----EIKLLKQL 81
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV--N 158
RH NL ++ +C K LVFE++++ L+D LE+F L +V
Sbjct: 82 RHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDD--------LELFPNGLDYQVVQK 128
Query: 159 IAIDVASAIEYLH-HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+ + I + H HN ++H DIKP N+L+ V + DFG ++ L++
Sbjct: 129 YLFQIINGIGFCHSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 35 MVSYAELSKATCEFSQSNMIGQGSYGSVYKGIL---GED-EMVVAVKVINLKQ-KGAFRS 89
M A + K T E + ++G G +G+V+KG+ GE ++ V +KVI K + +F++
Sbjct: 3 MKVLARIFKET-ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA 61
Query: 90 FVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF 149
A+ ++ H ++ +++ +C G+ + LV +Y+ GSL D + Q H
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQ-LVTQYLPLGSLLDHVRQ---HRGAL 112
Query: 150 KLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
L+ +N + +A + YL + MVH ++ NVLL + V DFG++ L
Sbjct: 113 GPQLL--LNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167
Query: 210 DH---LDTASETPSSSIGIK 226
D L + ++TP + ++
Sbjct: 168 DDKQLLYSEAKTPIKWMALE 187
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +IG G +G V+K D +K + + A R E +AL + H N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 107 KIITI---------CSSIDSKGADFKALV--FEYMENGSLEDWLHQTNDHLEVFKLSLIQ 155
SS +S + K L E+ + G+LE W+ + KL +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE----KLDKVL 123
Query: 156 RVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTA 215
+ + + ++Y+H +++ D+KPSN+ L + +GDFGL L +D
Sbjct: 124 ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR 180
Query: 216 SETPSSSIGIKGTVGYVAP 234
S KGT+ Y++P
Sbjct: 181 S---------KGTLRYMSP 190
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E M VA+K N F+ E +R H ++ K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + F L L + A +++A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKFSLDLASLILYAYQLSTALAY 126
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 35/196 (17%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVIN---LKQKGAFRSFVAECEALRNIR 101
+ ++G+GS+G V IL +D++ AVKVI+ +KQK S + E + L+ +
Sbjct: 51 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H N+ K+ + KG + LV E G L D + + + S + I
Sbjct: 108 HPNIMKLYEF---FEDKG--YFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIR 156
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTASET 218
V S I Y+H N +VH D+KP N+LL++ D + DFGLS AS+
Sbjct: 157 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKK 207
Query: 219 PSSSIGIKGTVGYVAP 234
I GT Y+AP
Sbjct: 208 MKDKI---GTAYYIAP 220
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 35/196 (17%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVIN---LKQKGAFRSFVAECEALRNIR 101
+ ++G+GS+G V IL +D++ AVKVI+ +KQK S + E + L+ +
Sbjct: 52 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H N+ K+ + KG + LV E G L D + + + S + I
Sbjct: 109 HPNIMKLYEF---FEDKG--YFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIR 157
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTASET 218
V S I Y+H N +VH D+KP N+LL++ D + DFGLS AS+
Sbjct: 158 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKK 208
Query: 219 PSSSIGIKGTVGYVAP 234
I GT Y+AP
Sbjct: 209 MKDKI---GTAYYIAP 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 27/210 (12%)
Query: 18 GSVRKPIDTLPMEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGIL---GED-EMV 73
G +P+D P EK ++ A + K T E + ++G G +G+V+KG+ GE ++
Sbjct: 8 GESIEPLD--PSEKANKVL--ARIFKET-ELRKLKVLGSGVFGTVHKGVWIPEGESIKIP 62
Query: 74 VAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMEN 132
V +KVI K + +F++ A+ ++ H ++ +++ +C G+ + LV +Y+
Sbjct: 63 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQ-LVTQYLPL 116
Query: 133 GSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDN 192
GSL D + Q H L+ +N + +A + YL + MVH ++ NVLL +
Sbjct: 117 GSLLDHVRQ---HRGALGPQLL--LNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKS 168
Query: 193 DMVAHVGDFGLSKFLSSDH---LDTASETP 219
V DFG++ L D L + ++TP
Sbjct: 169 PSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 54 IGQGSYGSVYKG-----ILGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 105
+GQGS+G VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE----VFKLSLIQRVNIAI 161
+++ + S KG +V E M +G L+ +L E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
++A + YL+ VH D+ N ++ +D +GDFG+++ + ET
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--------XETDXX 186
Query: 222 SIGIKG--TVGYVAP 234
G KG V ++AP
Sbjct: 187 RKGGKGLLPVRWMAP 201
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 54 IGQGSYGSVYKG-----ILGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 105
+GQGS+G VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 79
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE----VFKLSLIQRVNIAI 161
+++ + S KG +V E M +G L+ +L E +L + + +A
Sbjct: 80 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
++A + YL+ VH D+ N ++ +D +GDFG+++ + ET
Sbjct: 135 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--------XETDXX 183
Query: 222 SIGIKG--TVGYVAP 234
G KG V ++AP
Sbjct: 184 RKGGKGLLPVRWMAP 198
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 90/196 (45%), Gaps = 35/196 (17%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVIN---LKQKGAFRSFVAECEALRNIR 101
+ ++G+GS+G V IL +D++ AVKVI+ +KQK S + E + L+ +
Sbjct: 28 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H N+ K+ + KG + LV E G L D + + + S + I
Sbjct: 85 HPNIXKLYEF---FEDKG--YFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIR 133
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTASET 218
V S I Y H N +VH D+KP N+LL++ D + DFGLS AS+
Sbjct: 134 QVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKK 184
Query: 219 PSSSIGIKGTVGYVAP 234
I GT Y+AP
Sbjct: 185 XKDKI---GTAYYIAP 197
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS--FVAECEALRNIRHRNLTKIITI 111
+G G +G V G + + VAVK+I ++G+ F E + + + H L K +
Sbjct: 16 LGSGQFGVVKLGKW-KGQYDVAVKMI---KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 112 CSSIDSKGADFK-ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
CS ++ +V EY+ NG L ++L LE +L + + DV + +L
Sbjct: 72 CSK------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFL 120
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
+ +H D+ N L+D D+ V DFG+++++ D SS+G K V
Sbjct: 121 ESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-------VSSVGTKFPVK 170
Query: 231 YVAP 234
+ AP
Sbjct: 171 WSAP 174
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 54 IGQGSYGSVYKG-----ILGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 105
+GQGS+G VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE----VFKLSLIQRVNIAI 161
+++ + S KG +V E M +G L+ +L E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++A + YL+ VH D+ N ++ +D +GDFG+++
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 54 IGQGSYGSVYKG-----ILGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 105
+GQGS+G VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE----VFKLSLIQRVNIAI 161
+++ + S KG +V E M +G L+ +L E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
++A + YL+ VH D+ N ++ +D +GDFG+++ + ET
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--------XETDXX 186
Query: 222 SIGIKG--TVGYVAP 234
G KG V ++AP
Sbjct: 187 RKGGKGLLPVRWMAP 201
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 54 IGQGSYGSVYKG-----ILGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 105
+GQGS+G VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE----VFKLSLIQRVNIAI 161
+++ + S KG +V E M +G L+ +L E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++A + YL+ VH D+ N ++ +D +GDFG+++
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 54 IGQGSYGSVYKG-----ILGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 105
+GQGS+G VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 81
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE----VFKLSLIQRVNIAI 161
+++ + S KG +V E M +G L+ +L E +L + + +A
Sbjct: 82 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++A + YL+ VH D+ N ++ +D +GDFG+++
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 45/216 (20%)
Query: 43 KATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRH 102
+ +F + ++GQG++G V K D A+K I ++ + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNH 61
Query: 103 RNLTK----------IITICSSIDSKGADFKALVFEYMENGSLEDWLH------QTNDHL 146
+ + + + +++ K F + EY EN +L D +H Q +++
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLF--IQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 147 EVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK- 205
+F+ + A+ Y+H ++H ++KP N+ +D +GDFGL+K
Sbjct: 120 RLFR-----------QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKN 165
Query: 206 --------FLSSDHLDTASETPSSSIGIKGTVGYVA 233
L S +L +S+ +S+I GT YVA
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAI---GTAXYVA 198
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 32/192 (16%)
Query: 54 IGQGSYGSVYKGIL-GEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIIT 110
+G+G YG V++G+ GE VAVK+ + + + +S+ E E + RH N+ I
Sbjct: 16 VGKGRYGEVWRGLWHGES---VAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIA 69
Query: 111 ICSSIDSKGADFK-ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
S + S+ + + L+ Y E+GSL D+L + + + L R +A+ A + +
Sbjct: 70 --SDMTSRNSSTQLWLITHYHEHGSLYDFLQR-----QTLEPHLALR--LAVSAACGLAH 120
Query: 170 LH-----HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS--SDHLDTASETPSSS 222
LH +P + H D K NVL+ +++ + D GL+ S SD+LD +
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-- 178
Query: 223 IGIKGTVGYVAP 234
GT Y+AP
Sbjct: 179 ----GTKRYMAP 186
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 51 SNMIGQGSYGSVYKGILGE---DEMVVAVKV------INLKQKGAFRSFVAECEALRNIR 101
+ ++G+G +G VY+G+ +++ VAVK ++ K+K F++E ++N+
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-----FMSEAVIMKNLD 83
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H ++ K+I I + ++ E G L +L + + L+V L L ++
Sbjct: 84 HPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SL 132
Query: 162 DVASAIEYLHH-NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASET 218
+ A+ YL NC VH DI N+L+ + +GDFGLS+++ + AS T
Sbjct: 133 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 186
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 30/187 (16%)
Query: 54 IGQGSYGSVYKGILGEDEMV---VAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
+G G +VY L ED ++ VA+K I + +++ + F E + H+N+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+I + + D LV EY+E +L +++ LS+ +N + I
Sbjct: 76 MIDV-----DEEDDCYYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGI 124
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
++ H +VH DIKP N+L+D++ + DFG++K LS L + + + G
Sbjct: 125 KHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-------TQTNHVLG 174
Query: 228 TVGYVAP 234
TV Y +P
Sbjct: 175 TVQYFSP 181
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 51 SNMIGQGSYGSVYKGILGE---DEMVVAVKV------INLKQKGAFRSFVAECEALRNIR 101
+ ++G+G +G VY+G+ +++ VAVK ++ K+K F++E ++N+
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-----FMSEAVIMKNLD 67
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H ++ K+I I + ++ E G L +L + + L+V L L ++
Sbjct: 68 HPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SL 116
Query: 162 DVASAIEYLHH-NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASET 218
+ A+ YL NC VH DI N+L+ + +GDFGLS+++ + AS T
Sbjct: 117 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 170
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 47 EFSQSNMI---GQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHR 103
+F Q N + + G ++KG +++VV V + R F EC LR H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ ++ C S A L+ +M GSL + LH+ + F + Q V A+D+
Sbjct: 68 NVLPVLGACQ---SPPAPHPTLITHWMPYGSLYNVLHEGTN----FVVDQSQAVKFALDM 120
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
A + +L H +P + + +V++D DM A +
Sbjct: 121 ARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTARI 154
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 13/183 (7%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GSYG K D ++ K ++ + + V+E LR ++H N I+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN---IVRY 70
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
I + +V EY E G L + + + + RV + +A +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+ ++H D+KP+NV LD +GDFGL++ L+ D D A E GT Y
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE-DFAKE-------FVGTPYY 182
Query: 232 VAP 234
++P
Sbjct: 183 MSP 185
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 51 SNMIGQGSYGSVYKGILGE---DEMVVAVKV------INLKQKGAFRSFVAECEALRNIR 101
+ ++G+G +G VY+G+ +++ VAVK ++ K+K F++E ++N+
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-----FMSEAVIMKNLD 71
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H ++ K+I I + ++ E G L +L + + L+V L L ++
Sbjct: 72 HPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SL 120
Query: 162 DVASAIEYLHH-NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASET 218
+ A+ YL NC VH DI N+L+ + +GDFGLS+++ + AS T
Sbjct: 121 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 174
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 85/212 (40%), Gaps = 44/212 (20%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +IG G +G V+K D ++ + + A R E +AL + H N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 107 KIITICSSIDS---------KGADFKA---------------LVFEYMENGSLEDWLHQT 142
D + +D+ + E+ + G+LE W+ +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 143 NDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFG 202
KL + + + + ++Y+H ++H D+KPSN+ L + +GDFG
Sbjct: 129 RGE----KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 203 LSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
L L +D T S KGT+ Y++P
Sbjct: 182 LVTSLKNDGKRTRS---------KGTLRYMSP 204
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 76
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 32/192 (16%)
Query: 54 IGQGSYGSVYKGIL-GEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIIT 110
+G+G YG V++G GE+ VAVK+ + + + +S+ E E + RH N+ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIA 69
Query: 111 ICSSIDSKGADFK-ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
S + S+ + + L+ Y E GSL D+L T L + + I + +AS + +
Sbjct: 70 --SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAH 120
Query: 170 LH-----HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKF--LSSDHLDTASETPSSS 222
LH +P + H D+K N+L+ + + D GL+ S++ LD +
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-- 178
Query: 223 IGIKGTVGYVAP 234
GT Y+AP
Sbjct: 179 ----GTKRYMAP 186
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 41 LSKATCEFSQSNM-----IGQGSYGSVYKGILGEDE---MVVAVKVIN---LKQKGAFRS 89
L TC + ++ +G GS+G V +G + VAVK + L Q A
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 90 FVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF 149
F+ E A+ ++ HRNL ++ + + K +V E GSL D L + H F
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGH---F 118
Query: 150 KLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL-- 207
L + R A+ VA + YL +H D+ N+LL + +GDFGL + L
Sbjct: 119 LLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173
Query: 208 SSDH 211
+ DH
Sbjct: 174 NDDH 177
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNL 105
++ +IG G+ V + VA+K INL++ + + + E +A+ H N
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN- 69
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI---D 162
I++ +S K D LV + + GS+ D + E K ++ IA +
Sbjct: 70 --IVSYYTSFVVK--DELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILRE 124
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
V +EYLH N Q +H D+K N+LL D + DFG+S FL++ T ++ +
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 223 IGIKGTVGYVAP 234
+ GT ++AP
Sbjct: 182 V---GTPCWMAP 190
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 29 MEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR 88
+EK +VS + K F + IGQG+ G+VY + VA++ +NL+Q+
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 89 SFVAECEALRNIRHRNLTKIITICSSIDSK-GADFKALVFEYMENGSLEDWLHQTNDHLE 147
+ E +R ++ N I + +DS D +V EY+ GSL D + +T ++
Sbjct: 63 LIINEILVMRENKNPN------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMD 114
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
+++ + R + A+E+LH N ++H DIK N+LL D + DFG +
Sbjct: 115 EGQIAAVCR-----ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
Query: 208 SSDHLDTASETPSSSIGIKGTVGYVAP 234
+ + S + GT ++AP
Sbjct: 167 TPEQ--------SKRSTMVGTPYWMAP 185
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 41 LSKATCEFSQSNM-----IGQGSYGSVYKGILGEDE---MVVAVKVIN---LKQKGAFRS 89
L TC + ++ +G GS+G V +G + VAVK + L Q A
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 90 FVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF 149
F+ E A+ ++ HRNL ++ + + K +V E GSL D L + H F
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGH---F 118
Query: 150 KLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL-- 207
L + R A+ VA + YL +H D+ N+LL + +GDFGL + L
Sbjct: 119 LLGTLSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173
Query: 208 SSDH 211
+ DH
Sbjct: 174 NDDH 177
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 32/192 (16%)
Query: 54 IGQGSYGSVYKGIL-GEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIIT 110
+G+G YG V++G GE+ VAVK+ + + + +S+ E E + RH N+ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIA 69
Query: 111 ICSSIDSKGADFK-ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
S + S+ + + L+ Y E GSL D+L T L + + I + +AS + +
Sbjct: 70 --SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAH 120
Query: 170 LH-----HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKF--LSSDHLDTASETPSSS 222
LH +P + H D+K N+L+ + + D GL+ S++ LD +
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-- 178
Query: 223 IGIKGTVGYVAP 234
GT Y+AP
Sbjct: 179 ----GTKRYMAP 186
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 29 MEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR 88
+EK +VS + K F + IGQG+ G+VY + VA++ +NL+Q+
Sbjct: 7 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 63
Query: 89 SFVAECEALRNIRHRNLTKIITICSSIDSK-GADFKALVFEYMENGSLEDWLHQTNDHLE 147
+ E +R ++ N I + +DS D +V EY+ GSL D + +T ++
Sbjct: 64 LIINEILVMRENKNPN------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMD 115
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
+++ + R + A+E+LH N ++H DIK N+LL D + DFG +
Sbjct: 116 EGQIAAVCR-----ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 167
Query: 208 SSDHLDTASETPSSSIGIKGTVGYVAP 234
+ + S + GT ++AP
Sbjct: 168 TPEQ--------SKRSXMVGTPYWMAP 186
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS---FV 91
E A + + S +GQGS+G VY+G+ E E VA+K +N + + R F+
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 66
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---- 147
E ++ ++ +++ + S ++ E M G L+ +L +
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ SL + + +A ++A + YL+ N VH D+ N ++ D +GDFG+++
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRHRN 104
++ + +G+G+YG VYK + +VA+K I L + +G + + E L+ + H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
+ +I + S LVFE+ME L+ L + L Q I I +
Sbjct: 81 IVSLIDVIHS-----ERCLTLVFEFMEK-DLKKVLDENKTGL--------QDSQIKIYLY 126
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + H Q ++H D+KP N+L+++D + DFGL++
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRHRN 104
++ + +G+G+YG VYK + +VA+K I L + +G + + E L+ + H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
+ +I + S LVFE+ME L+ L + L Q I I +
Sbjct: 81 IVSLIDVIHS-----ERCLTLVFEFMEK-DLKKVLDENKTGL--------QDSQIKIYLY 126
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + H Q ++H D+KP N+L+++D + DFGL++
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 80 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 128
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 129 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 77 NPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYL-----LNWCV 125
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 126 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 32/192 (16%)
Query: 54 IGQGSYGSVYKGIL-GEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIIT 110
+G+G YG V++G GE+ VAVK+ + + + +S+ E E + RH N+ I
Sbjct: 45 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIA 98
Query: 111 ICSSIDSKGADFK-ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
S + S+ + + L+ Y E GSL D+L T L + + I + +AS + +
Sbjct: 99 --SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAH 149
Query: 170 LH-----HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKF--LSSDHLDTASETPSSS 222
LH +P + H D+K N+L+ + + D GL+ S++ LD +
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-- 207
Query: 223 IGIKGTVGYVAP 234
GT Y+AP
Sbjct: 208 ----GTKRYMAP 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 127 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 79 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 127
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 128 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 29 MEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR 88
+EK +VS + K F + IGQG+ G+VY + VA++ +NL+Q+
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 89 SFVAECEALRNIRHRNLTKIITICSSIDSK-GADFKALVFEYMENGSLEDWLHQTNDHLE 147
+ E +R ++ N I + +DS D +V EY+ GSL D + +T ++
Sbjct: 63 LIINEILVMRENKNPN------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMD 114
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
+++ + R + A+E+LH N ++H DIK N+LL D + DFG +
Sbjct: 115 EGQIAAVCR-----ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
Query: 208 SSDHLDTASETPSSSIGIKGTVGYVAP 234
+ + S + GT ++AP
Sbjct: 167 TPEQ--------SKRSXMVGTPYWMAP 185
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 84/155 (54%), Gaps = 15/155 (9%)
Query: 52 NMIGQGSYGSVYKGILGEDEMVVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLTKIIT 110
+ +G+G+Y +VYKG + +VA+K I L+ ++GA + + E L++++H N I+T
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN---IVT 64
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ I ++ + LVFEY++ L+ +L + +I N+ + + + L
Sbjct: 65 LHDIIHTEKS--LTLVFEYLDK-DLKQYLDDCGN--------IINMHNVKLFLFQLLRGL 113
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + ++H D+KP N+L++ + DFGL++
Sbjct: 114 AYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 77 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 125
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 126 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 125 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E M VA+K N F+ E +R H ++ K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + F L L + A +++A+ Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKFSLDLASLILYAYQLSTALAY 506
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 507 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 29 MEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR 88
+EK +VS + K F + IGQG+ G+VY + VA++ +NL+Q+
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 89 SFVAECEALRNIRHRNLTKIITICSSIDSK-GADFKALVFEYMENGSLEDWLHQTNDHLE 147
+ E +R ++ N I + +DS D +V EY+ GSL D + +T ++
Sbjct: 63 LIINEILVMRENKNPN------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMD 114
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
+++ + R + A+E+LH N ++H DIK N+LL D + DFG +
Sbjct: 115 EGQIAAVCR-----ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
Query: 208 SSDHLDTASETPSSSIGIKGTVGYVAP 234
+ + S + GT ++AP
Sbjct: 167 TPEQ--------SKRSEMVGTPYWMAP 185
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNL 105
++ +IG G+ V + VA+K INL++ + + + E +A+ H N
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN- 74
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI---D 162
I++ +S K D LV + + GS+ D + E K ++ IA +
Sbjct: 75 --IVSYYTSFVVK--DELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILRE 129
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
V +EYLH N Q +H D+K N+LL D + DFG+S FL++ T ++ +
Sbjct: 130 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 223 IGIKGTVGYVAP 234
+ GT ++AP
Sbjct: 187 V---GTPCWMAP 195
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G +G V+ G + VAVK + + ++F+ E ++ ++H L ++ + +
Sbjct: 21 LGAGQFGEVWMGYYN-NSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ ++ EYM GSL D+L E K+ L + ++ + +A + Y+
Sbjct: 79 REEPI-----YIITEYMAKGSLLDFLKSD----EGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
+H D++ +NVL+ ++ + DFGL++ + D+ TA E G K + + A
Sbjct: 130 N---YIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTARE------GAKFPIKWTA 179
Query: 234 P 234
P
Sbjct: 180 P 180
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNIRHR 103
+F +G+G +G+VY + + ++A+KV+ L++ G E E ++RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVNIAI 161
N+ ++ A L+ EY G++ + E+ KLS QR I
Sbjct: 73 NILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSRFDEQRTATYI 118
Query: 162 -DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPS 220
++A+A+ Y H ++H DIKP N+LL ++ + DFG S S DT
Sbjct: 119 TELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT------ 169
Query: 221 SSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 170 ----LCGTLDYLPP 179
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 46/196 (23%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ----------------------- 83
+++ + IG+GSYG V D A+KV++ K+
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 84 ---KGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
+G E L+ + H N+ K++ + +D D +VFE + G +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPV----- 125
Query: 141 QTNDHLEVFKLSLIQRVNIAI---DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
+EV L + D+ IEYLH+ ++H DIKPSN+L+ D
Sbjct: 126 -----MEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIK 177
Query: 198 VGDFGLS-KFLSSDHL 212
+ DFG+S +F SD L
Sbjct: 178 IADFGVSNEFKGSDAL 193
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA---FRSFVAECEALRNIRHRN 104
FS IG GS+G+VY + VVA+K ++ K + ++ + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 105 LTKIITICSSIDSKGADFKA----LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
+I +G + LV EY L +D LEV K L Q V IA
Sbjct: 116 ---------TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPL-QEVEIA 157
Query: 161 IDVASAIE---YLH-HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
A++ YLH HN M+H D+K N+LL + +GDFG + ++
Sbjct: 158 AVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 13/183 (7%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GSYG K D ++ K ++ + + V+E LR ++H N I+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN---IVRY 70
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
I + +V EY E G L + + + + RV + +A +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
+ ++H D+KP+NV LD +GDFGL++ L+ D S + GT Y
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--------TSFAKAFVGTPYY 182
Query: 232 VAP 234
++P
Sbjct: 183 MSP 185
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 47 EFSQSNM-----IGQGSYGSVYK----GILG-EDEMVVAVKVINLKQKGAFRS-FVAECE 95
E+ ++N+ IG+G++G V++ G+L E +VAVK++ + ++ F E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 96 ALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF------ 149
+ + N+ K++ +C+ L+FEYM G L ++L + H
Sbjct: 103 LMAEFDNPNIVKLLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 157
Query: 150 ------------KLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
LS +++ IA VA+ + YL VH D+ N L+ +MV
Sbjct: 158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVK 214
Query: 198 VGDFGLSK-FLSSDH 211
+ DFGLS+ S+D+
Sbjct: 215 IADFGLSRNIYSADY 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA--ECEALRNIRHRN 104
++ + IG+GSYG V+K + +VA+K + +A E L+ ++H N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
L ++ + + LVFEY ++ L H+ + + L++ +I
Sbjct: 64 LVNLLEV-----FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVK--SITWQTL 112
Query: 165 SAIEYLH-HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS--SDHLDTASET 218
A+ + H HNC +H D+KP N+L+ V + DFG ++ L+ SD+ D T
Sbjct: 113 QAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVAT 165
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E M VA+K N F+ E +R H ++ K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + + L L + A +++A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAY 126
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS----FVAECEALRNIRHRNLTKII 109
IG+GS+ +VYKG+ + E V V L+ + +S F E E L+ ++H N+ +
Sbjct: 34 IGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
S KG LV E +G+L+ +L + +V K+ +++ + + +++
Sbjct: 92 DSWEST-VKGKKCIVLVTELXTSGTLKTYLKR----FKVXKIKVLR--SWCRQILKGLQF 144
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKFLSSDHLDTASETPS 220
LH PP++H D+K N+ + + +GD GL+ + TP
Sbjct: 145 LHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE 195
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 28 PMEKQFPMVSYAELSKATCE-FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
P +Q + L+K E F +G+GSYGSVYK I E +VA+K + + +
Sbjct: 10 PPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESD 67
Query: 87 FRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFK----ALVFEYMENGSLEDWLHQT 142
+ + E ++ ++ K G+ FK +V EY GS+ D +
Sbjct: 68 LQEIIKEISIMQQCDSPHVVKYY---------GSYFKNTDLWIVMEYCGAGSVSDIIRLR 118
Query: 143 NDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFG 202
N L +++ I + + +EYLH + +H DIK N+LL+ + A + DFG
Sbjct: 119 NKTLTEDEIATILQSTL-----KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFG 170
Query: 203 LSKFLS 208
++ L+
Sbjct: 171 VAGQLT 176
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 45 TCEFSQSNM-----IGQGSYGSVYKGILGEDE---MVVAVKVIN---LKQKGAFRSFVAE 93
TC + ++ +G GS+G V +G + VAVK + L Q A F+ E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
A+ ++ HRNL ++ + + K +V E GSL D L + H F L
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGH---FLLGT 112
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL--SSDH 211
+ R A+ VA + YL +H D+ N+LL + +GDFGL + L + DH
Sbjct: 113 LSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVIN---LKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
+G+GS+G V + + VA+K I+ LK+ E L+ +RH ++ K+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ ++ D +V EY G L D++ + E Q++ AIEY
Sbjct: 77 VITT----PTDI-VMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQI------ICAIEYC 124
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS-DHLDTASETPS 220
H + +VH D+KP N+LLD+++ + DFGLS ++ + L T+ +P+
Sbjct: 125 HRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN 172
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA---FRSFVAECEALRNIRHRN 104
FS IG GS+G+VY + VVA+K ++ K + ++ + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 105 LTKIITICSSIDSKGADFKA----LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
+I +G + LV EY L +D LEV K L Q V IA
Sbjct: 77 ---------TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPL-QEVEIA 118
Query: 161 IDVASAIE---YLH-HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
A++ YLH HN M+H D+K N+LL + +GDFG + ++
Sbjct: 119 AVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 5/159 (3%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GSYG K D ++ K ++ + + V+E LR ++H N I+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN---IVRY 70
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
I + +V EY E G L + + + + RV + +A +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+ ++H D+KP+NV LD +GDFGL++ L+ D
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E M VA+K N F+ E +R H ++ K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + F L L + A +++A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKFSLDLASLILYAYQLSTALAY 126
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ +GDFGLS+++ AS+
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
E ++G+G++G V K + VA+K I + + ++F+ E L + H N+
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQI--ESESERKAFIVELRQLSRVNHPNIV 65
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
K+ C + LV EY E GSL + LH + L + + ++ + +
Sbjct: 66 KLYGAC-------LNPVCLVMEYAEGGSLYNVLHGA-EPLPYYTAA--HAMSWCLQCSQG 115
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL-DNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGI 225
+ YLH ++H D+KP N+LL V + DFG TA + +
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----------TACDIQTHMTNN 164
Query: 226 KGTVGYVAP 234
KG+ ++AP
Sbjct: 165 KGSAAWMAP 173
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 45 TCEFSQSNM-----IGQGSYGSVYKGILGE---DEMVVAVKVIN---LKQKGAFRSFVAE 93
TC + ++ +G GS+G V +G + VAVK + L Q A F+ E
Sbjct: 6 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
A+ ++ HRNL ++ + + K +V E GSL D L + H F L
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGH---FLLGT 116
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL--SSDH 211
+ R A+ VA + YL +H D+ N+LL + +GDFGL + L + DH
Sbjct: 117 LSRY--AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 45 TCEFSQSNM-----IGQGSYGSVYKGILGE---DEMVVAVKVIN---LKQKGAFRSFVAE 93
TC + ++ +G GS+G V +G + VAVK + L Q A F+ E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
A+ ++ HRNL ++ + + K +V E GSL D L + H F L
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGH---FLLGT 112
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL--SSDH 211
+ R A+ VA + YL +H D+ N+LL + +GDFGL + L + DH
Sbjct: 113 LSRY--AVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
E ++G+G++G V K + VA+K I + + ++F+ E L + H N+
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQI--ESESERKAFIVELRQLSRVNHPNIV 64
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
K+ C + LV EY E GSL + LH + L + + ++ + +
Sbjct: 65 KLYGAC-------LNPVCLVMEYAEGGSLYNVLHGA-EPLPYYTAA--HAMSWCLQCSQG 114
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL-DNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGI 225
+ YLH ++H D+KP N+LL V + DFG TA + +
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----------TACDIQTHMTNN 163
Query: 226 KGTVGYVAP 234
KG+ ++AP
Sbjct: 164 KGSAAWMAP 172
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 67 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 112
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S DT
Sbjct: 113 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT--- 166
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 167 -------LCGTLDYLPP 176
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 125 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 86 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 134
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 135 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 45 TCEFSQSNM-----IGQGSYGSVYKGILGEDE---MVVAVKVIN---LKQKGAFRSFVAE 93
TC + ++ +G GS+G V +G + VAVK + L Q A F+ E
Sbjct: 2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
A+ ++ HRNL ++ + + K +V E GSL D L + H F L
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGH---FLLGT 112
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL--SSDH 211
+ R A+ VA + YL +H D+ N+LL + +GDFGL + L + DH
Sbjct: 113 LSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 127 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 45 TCEFSQSNM-----IGQGSYGSVYKGILGE---DEMVVAVKVIN---LKQKGAFRSFVAE 93
TC + ++ +G GS+G V +G + VAVK + L Q A F+ E
Sbjct: 6 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
A+ ++ HRNL ++ + + K +V E GSL D L + H F L
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGH---FLLGT 116
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL--SSDH 211
+ R A+ VA + YL +H D+ N+LL + +GDFGL + L + DH
Sbjct: 117 LSRY--AVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 73 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 121
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 122 QIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 54 IGQGSYGSVYKG-----ILGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 105
+GQGS+G VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE----VFKLSLIQRVNIAI 161
+++ + S KG +V E M +G L+ +L E +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++A + YL+ VH ++ N ++ +D +GDFG+++
Sbjct: 138 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 83 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 131
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 132 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 79 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 127
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 128 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 54 IGQGSYGSVYKG-----ILGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNL 105
+GQGS+G VY+G I GE E VAVK +N + + R F+ E ++ ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 83
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE----VFKLSLIQRVNIAI 161
+++ + S KG +V E M +G L+ +L E +L + + +A
Sbjct: 84 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++A + YL+ VH ++ N ++ +D +GDFG+++
Sbjct: 139 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 79 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 127
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 128 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 79 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 127
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 128 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 125 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 70 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 118
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 119 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 101 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 149
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 150 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 82 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 130
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 131 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 27/183 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLTKIITI 111
IG+G YG V+ G ++ VAVKV ++ S+ E E + + RH N+ I
Sbjct: 45 IGKGRYGEVWMGKWRGEK--VAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFI-- 97
Query: 112 CSSIDSKGADFKA-LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ I G+ + L+ +Y ENGSL D+L T L + +A S + +L
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLCHL 150
Query: 171 HHNC-----QPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLS-SDHLDTASETPSSSI 223
H +P + H D+K N+L+ + + D GL+ KF+S ++ +D P++ +
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP---PNTRV 207
Query: 224 GIK 226
G K
Sbjct: 208 GTK 210
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 34/175 (19%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
F++ IG+GS+G V+KGI + VVA+K+I+L++ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE------------- 55
Query: 108 IITICSSIDSK------GADFK----ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
IT+ S DS G+ K ++ EY+ GS D LE L Q
Sbjct: 56 -ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIA 107
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
I ++ ++YLH + +H DIK +NVLL + DFG++ L+ +
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 159
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 34/175 (19%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
F++ IG+GS+G V+KGI + VVA+K+I+L++ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE------------- 70
Query: 108 IITICSSIDSK------GADFK----ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
IT+ S DS G+ K ++ EY+ GS D LE L Q
Sbjct: 71 -ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIA 122
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
I ++ ++YLH + +H DIK +NVLL + DFG++ L+ +
Sbjct: 123 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 34/175 (19%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
F++ IG+GS+G V+KGI + VVA+K+I+L++ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE------------- 55
Query: 108 IITICSSIDSK------GADFK----ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
IT+ S DS G+ K ++ EY+ GS D LE L Q
Sbjct: 56 -ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIA 107
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
I ++ ++YLH + +H DIK +NVLL + DFG++ L+ +
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 159
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+D++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKDFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VAVK+I+ Q + + E ++ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + LV EY G + D+L E + +++ SA++Y
Sbjct: 80 EV---IETEKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQY 128
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD DM + DFG S +F + LDT +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 27 LPMEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGED---EMVVAVKVINLKQ 83
+P + P AE + +F +++G G++ V IL ED + +VA+K I K
Sbjct: 1 MPGAVEGPRWKQAEDIRDIYDFR--DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKA 55
Query: 84 -KGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQT 142
+G S E L I+H N I+ + +S G + L+ + + G L D + +
Sbjct: 56 LEGKEGSMENEIAVLHKIKHPN---IVALDDIYESGGHLY--LIMQLVSGGELFDRIVEK 110
Query: 143 NDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVL---LDNDMVAHVG 199
+ E LI V A++YLH +VH D+KP N+L LD D +
Sbjct: 111 GFYTERDASRLI------FQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 200 DFGLSKFLSSDHLDTASETPSSSIGIK-GTVGYVAP 234
DFGLSK E P S + GT GYVAP
Sbjct: 162 DFGLSKM----------EDPGSVLSTACGTPGYVAP 187
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E + VA+K N F+ E +R H ++ K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + + L L + A +++A+ Y
Sbjct: 106 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAY 154
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 155 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G +G V+ G + VAVK + + ++F+ E ++ ++H L ++ + +
Sbjct: 20 LGAGQFGEVWMGYYN-NSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ ++ E+M GSL D+L E K+ L + ++ + +A + Y+
Sbjct: 78 KEEPI-----YIITEFMAKGSLLDFLKSD----EGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
+H D++ +NVL+ ++ + DFGL++ + D+ TA E G K + + A
Sbjct: 129 N---YIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTARE------GAKFPIKWTA 178
Query: 234 P 234
P
Sbjct: 179 P 179
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E + VA+K N F+ E +R H ++ K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + + L L + A +++A+ Y
Sbjct: 83 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAY 131
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 132 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VAVK+I+ Q + + E ++ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + LV EY G + D+L E + +++ SA++Y
Sbjct: 80 EV---IETEKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQY 128
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD DM + DFG S +F + LDT +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 34/175 (19%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
F++ IG+GS+G V+KGI + VVA+K+I+L++ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE------------- 75
Query: 108 IITICSSIDSK------GADFK----ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
IT+ S DS G+ K ++ EY+ GS D LE L Q
Sbjct: 76 -ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-------ALDLLEPGPLDETQIA 127
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
I ++ ++YLH + +H DIK +NVLL + DFG++ L+ +
Sbjct: 128 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 179
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E + VA+K N F+ E +R H ++ K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + + L L + A +++A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAY 126
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E M VA+K N F+ E +R H ++ K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + F L L + A +++A+ Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKFSLDLASLILYAYQLSTALAY 506
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ +GDFGLS+++ AS+
Sbjct: 507 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E + VA+K N F+ E +R H ++ K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + + L L + A +++A+ Y
Sbjct: 80 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAY 128
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 129 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ + L+D++ + L L LI+ +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFL-SMDLKDFMDASA--LTGIPLPLIK--SYLFQ 114
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E + VA+K N F+ E +R H ++ K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + + L L + A +++A+ Y
Sbjct: 81 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAY 129
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 54 IGQGSYGSVYKGILGEDE---MVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
IG+G +G V++GI E + VA+K N F+ E +R H ++ K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ + + ++ E G L +L + + L L + A +++A+ Y
Sbjct: 75 GVITE------NPVWIIMELCTLGELRSFLQ-----VRKYSLDLASLILYAYQLSTALAY 123
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
L VH DI NVL+ ++ +GDFGLS+++ AS+
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
F++ + IG+GS+G VYKGI + VVA+K+I+L++ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE------------- 67
Query: 108 IITICSSIDSK------GADFKA----LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
IT+ S DS G+ K+ ++ EY+ GS D L LE ++ I R
Sbjct: 68 -ITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILR- 123
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
++ ++YLH + +H DIK +NVLL + DFG++ L+ +
Sbjct: 124 ----EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 171
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 21/200 (10%)
Query: 41 LSKATC-EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS-FVAECEALR 98
L TC + +G G +G V + I + VA+K + R + E + ++
Sbjct: 9 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 68
Query: 99 NIRHRNLTKIITICSSIDSKGA-DFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
+ H N+ + + D L EY E G L +L+Q + + + +
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---R 125
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSKFLSSDHLDT 214
+ D++SA+ YLH N ++H D+KP N++L ++ + D G +K L L T
Sbjct: 126 TLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 182
Query: 215 ASETPSSSIGIKGTVGYVAP 234
GT+ Y+AP
Sbjct: 183 E---------FVGTLQYLAP 193
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 21/200 (10%)
Query: 41 LSKATC-EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS-FVAECEALR 98
L TC + +G G +G V + I + VA+K + R + E + ++
Sbjct: 8 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 67
Query: 99 NIRHRNLTKIITICSSIDSKGA-DFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
+ H N+ + + D L EY E G L +L+Q + + + +
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---R 124
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSKFLSSDHLDT 214
+ D++SA+ YLH N ++H D+KP N++L ++ + D G +K L L T
Sbjct: 125 TLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 181
Query: 215 ASETPSSSIGIKGTVGYVAP 234
GT+ Y+AP
Sbjct: 182 E---------FVGTLQYLAP 192
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ + L+D++ + L L LI+ +
Sbjct: 64 PNIVKLLDVIHTENKL-----YLVFEFL-SMDLKDFMDASA--LTGIPLPLIK--SYLFQ 113
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G + + E+ KLS QR
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPRGEV---------YKELQKLSKFDEQRTA 116
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 165
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 166 --SRRXXLXGTLDYLPP 180
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 30/197 (15%)
Query: 27 LPMEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINL 81
+P+ Q E+S + F + +G+ +G VYKG L GE VA+K +
Sbjct: 9 MPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD 66
Query: 82 KQKGAFRS-FVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
K +G R F E ++H N+ ++ + + +++F Y +G L ++L
Sbjct: 67 KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL-----SMIFSYCSHGDLHEFLV 121
Query: 141 QTNDHLEV----------FKLSLIQRVNIAIDVASAIEYL--HHNCQPPMVHGDIKPSNV 188
+ H +V L V++ +A+ +EYL HH +VH D+ NV
Sbjct: 122 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNV 176
Query: 189 LLDNDMVAHVGDFGLSK 205
L+ + + + D GL +
Sbjct: 177 LVYDKLNVKISDLGLFR 193
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 50 QSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKII 109
++G+G +G K E V+ +K + + R+F+ E + +R + H N+ K I
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ K +F + EY++ G+L + + + QRV+ A D+AS + Y
Sbjct: 74 GVLYK--DKRLNF---ITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAY 123
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
LH ++H D+ N L+ + V DFGL++ +
Sbjct: 124 LHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLM 158
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VAVK+I+ Q + + E ++ + H N+ K+
Sbjct: 15 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWL--HQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ I+++ + LV EY G + D+L H E R + SA+
Sbjct: 73 EV---IETEKTLY--LVMEYASGGEVFDYLVAHGWMKEKEA-------RAKFR-QIVSAV 119
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
+Y H Q +VH D+K N+LLD DM + DFG S +F + LDT +P
Sbjct: 120 QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 169
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFG +K L ++ + +E
Sbjct: 127 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 67 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 112
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T S
Sbjct: 113 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS- 168
Query: 218 TPSSSIGIKGTVGYVAP 234
GT+ Y+ P
Sbjct: 169 ---------GTLDYLPP 176
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 30/197 (15%)
Query: 45 TCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR-SFVAECEALRNIRHR 103
+ +F +++G+G+YG V +VA+K I K F + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQ-------TNDHLEVFKLSLIQR 156
N+ I I + F+ Y+ ++ LH+ ++DH++ F ++
Sbjct: 70 NIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
A++ LH + ++H D+KPSN+L++++ V DFGL++ + D +
Sbjct: 124 ---------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 217 ETPSSSIGIKGTVGYVA 233
T S G YVA
Sbjct: 172 PTGQQS----GMTEYVA 184
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFG +K L ++ + +E
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 80 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 128
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFG +K L ++ + +E
Sbjct: 129 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 30/197 (15%)
Query: 45 TCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR-SFVAECEALRNIRHR 103
+ +F +++G+G+YG V +VA+K I K F + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQ-------TNDHLEVFKLSLIQR 156
N+ I I + + ++ E M+ LH+ ++DH++ F ++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
A++ LH + ++H D+KPSN+L++++ V DFGL++ + D +
Sbjct: 124 ---------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 217 ETPSSSIGIKGTVGYVA 233
T S G V +VA
Sbjct: 172 PTGQQS----GMVEFVA 184
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 29 MEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR 88
+EK +VS + K F + IGQG+ G+VY + VA++ +NL+Q+
Sbjct: 7 LEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 63
Query: 89 SFVAECEALRNIRHRNLTKIITICSSIDSK-GADFKALVFEYMENGSLEDWLHQTNDHLE 147
+ E +R ++ N I + +DS D +V EY+ GSL D + +T ++
Sbjct: 64 LIINEILVMRENKNPN------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMD 115
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
+++ + R + A+E+LH N ++H +IK N+LL D + DFG +
Sbjct: 116 EGQIAAVCR-----ECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQI 167
Query: 208 SSDHLDTASETPSSSIGIKGTVGYVAP 234
+ + S + GT ++AP
Sbjct: 168 TPEQ--------SKRSTMVGTPYWMAP 186
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 28 PMEKQFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVK---VINLKQK 84
P + P + Y L+ F IG+G + VY+ D + VA+K + +L
Sbjct: 18 PQKALRPDMGYNTLA----NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA 73
Query: 85 GAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTND 144
A + E + L+ + H N+ K S I+ + +V E + G L +
Sbjct: 74 KARADCIKEIDLLKQLNHPNVIKYYA--SFIEDNELN---IVLELADAGDLSRMI----K 124
Query: 145 HLEVFKLSLIQRV--NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFG 202
H + K + +R + + SA+E++H ++H DIKP+NV + V +GD G
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 181
Query: 203 LSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
L +F SS TA+ + + GT Y++P
Sbjct: 182 LGRFFSSK--TTAAHS------LVGTPYYMSP 205
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 39 AELSKATCEFSQSNMIGQGSYGSVYKGILGEDEM---VVAVKVINLKQ-KGAFRSFVAEC 94
AE K EF ++ +G G++ V +L E++ + AVK I K KG S E
Sbjct: 17 AEDIKKIFEFKET--LGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEI 71
Query: 95 EALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI 154
LR I+H N+ + I S + LV + + G L D + + + E +LI
Sbjct: 72 AVLRKIKHENIVALEDIYES-----PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI 126
Query: 155 QRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFL-SSD 210
++V A+ YLH + +VH D+KP N+L D + + DFGLSK D
Sbjct: 127 RQV------LDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 211 HLDTASETPSSSIGIKGTVGYVAP 234
+ TA TP GYVAP
Sbjct: 178 VMSTACGTP----------GYVAP 191
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRHRN 104
++ + IG+G+YG+V+K E +VA+K + L +G S + E L+ ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL--EVFKLSLIQRVNIAID 162
+ ++ + S D K LVFE+ + L+ + N L E+ K L Q
Sbjct: 63 IVRLHDVLHS-DKK----LTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQ------- 109
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H ++H D+KP N+L++ + + DFGL++
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + +L E VAVK+I+ Q + + E ++ + H N+ K+
Sbjct: 23 IGKGNFAKVKLARHVLTGRE--VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + LV EY G + D+L E + +++ SA++Y
Sbjct: 81 EV---IETEKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQY 129
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD DM + DFG S +F + LDT +P
Sbjct: 130 CH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSP 177
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VAV++I+ Q + + E ++ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + LV EY G + D+L E + +++ SA++Y
Sbjct: 80 EV---IETEKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQY 128
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD DM + DFG S +F + LDT +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++ G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 83 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 131
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 132 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 92 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 137
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S D
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD--- 191
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 192 -------LCGTLDYLPP 201
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK---QKGAFRSFVAECEALRNIRHR 103
+F +IG+GS+G V +E+ AVKV+ K +K + ++E RN+ +
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE----RNVLLK 94
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI-AID 162
N+ + + AD V +Y+ G L HL+ + L R A +
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGEL-------FYHLQRERCFLEPRARFYAAE 147
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
+ASA+ YLH +V+ D+KP N+LLD+ + DFGL K E S++
Sbjct: 148 IASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--------ENIEHNSTT 196
Query: 223 IGIKGTVGYVAP 234
GT Y+AP
Sbjct: 197 STFCGTPEYLAP 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 33/194 (17%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNIRHR 103
+F +G+G +G+VY + + ++A+KV+ L++ G E E ++RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVNIAI 161
N+ ++ A L+ EY G++ + E+ KLS QR I
Sbjct: 73 NILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSRFDEQRTATYI 118
Query: 162 -DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPS 220
++A+A+ Y H ++H DIKP N+LL ++ + DFG S S S
Sbjct: 119 TELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPS----------S 165
Query: 221 SSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 166 RRTTLCGTLDYLPP 179
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 39 AELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECE 95
A+ A +F +G+G +G+VY + + ++A+KV+ L++ G E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 96 ALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI- 154
++RH N+ ++ A L+ EY G++ + E+ KLS
Sbjct: 61 IQSHLRHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFD 106
Query: 155 -QRVNIAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
QR I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 107 EQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 160
Query: 213 DTASETPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 161 -------SRRAALCGTLDYLPP 175
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VA+K+I+ Q + + E ++ + H N+ K+
Sbjct: 20 IGKGNFAKVKLARHILTGRE--VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + L+ EY G + D+L E S +++ SA++Y
Sbjct: 78 EV---IETEKTLY--LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------VSAVQY 126
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD DM + DFG S +F LDT +P
Sbjct: 127 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSP 174
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 53 MIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR--SFVAECEALRNIRHRNLTKIIT 110
++G G++ V+ + A+K I K+ AFR S E L+ I+H N+ +
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
I S LV + + G L D + + + E +IQ+V SA++YL
Sbjct: 74 IYES-----TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV------LSAVKYL 122
Query: 171 HHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
H N +VH D+KP N+L + + + DFGLSK + + TA TP
Sbjct: 123 HENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP-------- 171
Query: 228 TVGYVAP 234
GYVAP
Sbjct: 172 --GYVAP 176
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 92 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 137
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--- 191
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 192 -------LCGTLDYLPP 201
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFG +K L ++ + +E
Sbjct: 127 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S D
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD--- 168
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 169 -------LCGTLDYLPP 178
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G + + E+ KLS QR
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPRGEV---------YKELQKLSKFDEQRTA 116
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--- 170
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 171 -------LCGTLDYLPP 180
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 83 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 131
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFG +K L ++ + +E
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++G G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFG +K L ++ + +E
Sbjct: 125 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 20/110 (18%)
Query: 134 SLEDWLHQTNDHLEVFKLSLIQR-----VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
+L+DW+++ + SL R ++I I +A A+E+LH ++H D+KPSN+
Sbjct: 147 NLKDWMNR--------RCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNI 195
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETP----SSSIGIKGTVGYVAP 234
D V VGDFGL + D + TP ++ G GT Y++P
Sbjct: 196 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSP 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G +G V+ + VAVK + + +F+AE ++ ++H L K+ + +
Sbjct: 23 LGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ ++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 81 K------EPIYIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 128
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
Q +H D++ +N+L+ +V + DFGL++ + D+ TA E G K + + A
Sbjct: 129 -QRNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTARE------GAKFPIKWTA 180
Query: 234 P 234
P
Sbjct: 181 P 181
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 103 RNLTKIITICSSIDSKGADFKALVFEY--MENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
N+ K++ + + + LVFE+ M+ D T L + K L Q
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ----- 114
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 115 --LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--- 165
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 166 -------LCGTLDYLPP 175
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++ G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 83 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 131
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 132 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G +G V+ + VAVK + + +F+AE ++ ++H L K+ + +
Sbjct: 196 LGAGQFGEVWMATYNK-HTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ ++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 254 K------EPIYIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 301
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
Q +H D++ +N+L+ +V + DFGL++ + D+ TA E G K + + A
Sbjct: 302 -QRNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTARE------GAKFPIKWTA 353
Query: 234 P 234
P
Sbjct: 354 P 354
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 160
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 161 --SRRTDLCGTLDYLPP 175
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 65 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 110
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 111 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 159
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 160 --SRRTTLCGTLDYLPP 174
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGI-LGEDEMV-VAVKVINLKQ---KGAFRSFVAECEALRNIR 101
EF + ++ G++G+VYKG+ + E E V + V + L++ A + + E + ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
+ ++ +++ IC + + L+ + M G L D++ + D++ L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+A + YL +VH D+ NVL+ + DFGL+K L ++ + +E
Sbjct: 125 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 70 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 115
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T
Sbjct: 116 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--- 169
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 170 -------LCGTLDYLPP 179
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEY--MENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
N+ K++ + + + LVFE+ M+ D T L + K L Q
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ----- 112
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 113 --LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 52 NMIGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
+ +G+G++GSV Y + +VAVK + R F E + L+ + + K
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ G LV EY+ +G L D+L + L+ +L L + + +
Sbjct: 73 YRGVSYG---PGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 124
Query: 168 EYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
EYL C VH D+ N+L++++ + DFGL+K L D P S
Sbjct: 125 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 67 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 112
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 113 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 161
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 162 --SRRTDLCGTLDYLPP 176
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 163
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 164 --SRRAALCGTLDYLPP 178
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 163
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 164 --SRRTTLCGTLDYLPP 178
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 69 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 118
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 69 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 118
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIA 160
N+ K++ + + + LVFE++ + D T L + K L Q
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQ----- 114
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 115 --LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 114
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 64 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 113
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 160
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 161 --SRRTDLCGTLDYLPP 175
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 116
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--- 170
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 171 -------LCGTLDYLPP 180
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + + H+N+ +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 99 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 154 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + + H+N+ +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 113 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 168 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 66 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 115
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 116
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--- 170
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 171 -------LCGTLDYLPP 180
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 34/175 (19%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
F++ IG+GS+G V+KGI + VVA+K+I+L++ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE------------- 71
Query: 108 IITICSSIDSK------GADFKA----LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
IT+ S DS G+ K ++ EY+ GS D L + F+++ + +
Sbjct: 72 -ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLK- 127
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
++ ++YLH + +H DIK +NVLL + DFG++ L+ +
Sbjct: 128 ----EILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 52 NMIGQGSYGSVYKGILGED---EMVVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLTK 107
+++G G++ V IL ED + +VA+K I + +G S E L I+H N
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN--- 77
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
I+ + +S G + L+ + + G L D + + + E LI V A+
Sbjct: 78 IVALDDIYESGGHLY--LIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDAV 129
Query: 168 EYLHHNCQPPMVHGDIKPSNVL---LDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIG 224
+YLH +VH D+KP N+L LD D + DFGLSK E P S +
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----------EDPGSVLS 176
Query: 225 IK-GTVGYVAP 234
GT GYVAP
Sbjct: 177 TACGTPGYVAP 187
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 71 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 116
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 165
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 166 --SRRTDLCGTLDYLPP 180
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 160
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 161 --SRRTELCGTLDYLPP 175
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 160
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 161 --SRRTXLCGTLDYLPP 175
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 52 NMIGQGSYGSVYKGILGED---EMVVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLTK 107
+++G G++ V IL ED + +VA+K I + +G S E L I+H N
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN--- 77
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
I+ + +S G + L+ + + G L D + + + E LI V A+
Sbjct: 78 IVALDDIYESGGHLY--LIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDAV 129
Query: 168 EYLHHNCQPPMVHGDIKPSNVL---LDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIG 224
+YLH +VH D+KP N+L LD D + DFGLSK E P S +
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----------EDPGSVLS 176
Query: 225 IK-GTVGYVAP 234
GT GYVAP
Sbjct: 177 TACGTPGYVAP 187
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 83 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 128
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T
Sbjct: 129 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--- 182
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 183 -------LCGTLDYLPP 192
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 114
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 64 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 113
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S T
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--- 168
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 169 -------LCGTLDYLPP 178
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 112
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 112
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 66 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 115
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 110
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 110
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 64 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 113
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 68 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 113
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 114 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 162
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 163 --SRRXXLCGTLDYLPP 177
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 66 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 111
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 160
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 161 --SRRXXLCGTLDYLPP 175
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 110
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 52 NMIGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
+ +G+G++GSV Y + +VAVK + R F E + L+ + + K
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ G LV EY+ +G L D+L + L+ +L L + + +
Sbjct: 76 YRGVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 127
Query: 168 EYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
EYL C VH D+ N+L++++ + DFGL+K L D
Sbjct: 128 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLD 167
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 112
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 163
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 164 --SRRXXLCGTLDYLPP 178
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VAVK+I+ Q + + E ++ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + LV EY G + D+L E + +++ SA++Y
Sbjct: 80 EV---IETEKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQY 128
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD DM + DFG S +F + LD P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP 176
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 52 NMIGQGSYGSVYKGILGED---EMVVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLTK 107
+++G G++ V IL ED + +VA+K I + +G S E L I+H N
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN--- 77
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
I+ + +S G + L+ + + G L D + + + E LI V A+
Sbjct: 78 IVALDDIYESGGHLY--LIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDAV 129
Query: 168 EYLHHNCQPPMVHGDIKPSNVL---LDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIG 224
+YLH +VH D+KP N+L LD D + DFGLSK E P S +
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----------EDPGSVLS 176
Query: 225 IK-GTVGYVAP 234
GT GYVAP
Sbjct: 177 TACGTPGYVAP 187
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 63 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 108
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 109 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-------- 157
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 158 --SRRTTLCGTLDYLPP 172
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 28/200 (14%)
Query: 45 TCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR-SFVAECEALRNIRHR 103
+ +F +++G+G+YG V +VA+K I K F + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQ-------TNDHLEVFKLSLIQR 156
N+ I I + F+ Y+ ++ LH+ ++DH++ F ++
Sbjct: 70 NIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR- 123
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
A++ LH + ++H D+KPSN+L++++ V DFGL++ + D +
Sbjct: 124 ---------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 217 ETPSSS--IGIKGTVGYVAP 234
T S T Y AP
Sbjct: 172 PTGQQSGMTEXVATRWYRAP 191
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 63 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 112
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 110
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 52 NMIGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
+ +G+G++GSV Y + +VAVK + R F E + L+ + + K
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ G LV EY+ +G L D+L + L+ +L L + + +
Sbjct: 77 YRGVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 128
Query: 168 EYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
EYL C VH D+ N+L++++ + DFGL+K L D
Sbjct: 129 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLD 168
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 139 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 194 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGILG-----EDEMVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTK 107
+G G++G VY+G + + VAVK + + + F+ E + H+N+ +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 113 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 168 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 90 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 145 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 45/200 (22%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAF-----------RSFVAECEALR 98
+G G+YG V K G E A+KVI Q KG + E L+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEK--AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 99 NIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVN 158
++ H N+ K+ + D K + LV E+ E G L + + N H K N
Sbjct: 102 SLDHPNIIKLFDVFE--DKK---YFYLVTEFYEGGELFEQI--INRH----KFDECDAAN 150
Query: 159 IAIDVASAIEYLH-HNCQPPMVHGDIKPSNVLLDND---MVAHVGDFGLSKFLSSDHLDT 214
I + S I YLH HN +VH DIKP N+LL+N + + DFGLS F S D+
Sbjct: 151 IMKQILSGICYLHKHN----IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY--- 203
Query: 215 ASETPSSSIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 204 ---KLRDRL---GTAYYIAP 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 52 NMIGQGSYGSV----YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
+ +G+G++GSV Y + +VAVK + R F E + L+ + + K
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ G LV EY+ +G L D+L + L+ +L L + + +
Sbjct: 89 YRGVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 140
Query: 168 EYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
EYL C VH D+ N+L++++ + DFGL+K L D
Sbjct: 141 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLD 180
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 98 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 153 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 115 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 170 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 39 AELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECE 95
A+ A +F +G+G +G+VY + ++A+KV+ L++ G E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 96 ALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI- 154
++RH N+ ++ DS L+ EY G++ + E+ KLS
Sbjct: 61 IQSHLRHPNILRLYGYFH--DSTRV---YLILEYAPLGTV---------YRELQKLSKFD 106
Query: 155 -QRVNIAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
QR I ++A+A+ Y H ++H DIKP N+LL + + DFG S S
Sbjct: 107 EQRTATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 160
Query: 213 DTASETPSSSIGIKGTVGYVAP 234
S + GT+ Y+ P
Sbjct: 161 -------SRRAALCGTLDYLPP 175
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 99 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 154 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE+++ L+ ++ + L L LI+ +
Sbjct: 65 PNIVKLLDVIHTENKL-----YLVFEHVDQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 114
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRHRN 104
++ + IG+G+YG+V+K E +VA+K + L +G S + E L+ ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL--EVFKLSLIQRVNIAID 162
+ ++ + S D K LVFE+ + L+ + N L E+ K L Q
Sbjct: 63 IVRLHDVLHS-DKK----LTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQ------- 109
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H ++H D+KP N+L++ + + +FGL++
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 116 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 171 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 105 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 160 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 50 QSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFV-AECEALRNIR-HRNLTK 107
Q +++G+G++ V I AVK+I KQ G RS V E E L + HRN+ +
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+I D LVFE M GS+ +H+ E+ ++Q DVASA+
Sbjct: 76 LIEFFEEEDRF-----YLVFEKMRGGSILSHIHKRRHFNELEASVVVQ------DVASAL 124
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDN-DMVAHVG--DFGLSKFLSSDHLDTASETPSSSIG 224
++LH+ + H D+KP N+L ++ + V+ V DFGL + + + TP +
Sbjct: 125 DFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP-ELLT 180
Query: 225 IKGTVGYVAP 234
G+ Y+AP
Sbjct: 181 PCGSAEYMAP 190
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 98 CIGV--SLQSLP---RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 153 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 125 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 180 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 113 CIGV--SLQSLP---RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 168 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 42 SKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI- 100
S+ T EF + IG G +GSV+K + D + A+K + K V E ALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 101 RHRNLTKIITICSSIDSKGADFKALV-FEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
H L + + + D L+ EY GSL D + + + FK + ++ ++
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK--DL 118
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+ V + Y+H +VH DIKPSN+ +
Sbjct: 119 LLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 42 SKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI- 100
S+ T EF + IG G +GSV+K + D + A+K + K V E ALR +
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 58
Query: 101 RHRNLTKIITICSSIDSKGADFKALV-FEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
H L + + + D L+ EY GSL D + + + FK + ++ ++
Sbjct: 59 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK--DL 116
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+ V + Y+H +VH DIKPSN+ +
Sbjct: 117 LLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 42 SKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI- 100
S+ T EF + IG G +GSV+K + D + A+K + K V E ALR +
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 62
Query: 101 RHRNLTKIITICSSIDSKGADFKALV-FEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
H L + + + D L+ EY GSL D + + + FK + ++ ++
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK--DL 120
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+ V + Y+H +VH DIKPSN+ +
Sbjct: 121 LLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 42 SKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI- 100
S+ T EF + IG G +GSV+K + D + A+K + K V E ALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 101 RHRNLTKIITICSSIDSKGADFKALV-FEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
H L + + + D L+ EY GSL D + + + FK + ++ ++
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK--DL 118
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+ V + Y+H +VH DIKPSN+ +
Sbjct: 119 LLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGAFRS---FVAECEALRNIRHRNLTK 107
+G G++G VY+G + D + V V L + + + F+ E + H+N+ +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAIDVASA 166
I + S+ S + ++ E M G L+ +L +T + L+++ +++A D+A
Sbjct: 99 CIGV--SLQSLP---RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLD---NDMVAHVGDFGLSK 205
+YL N +H DI N LL VA +GDFG+++
Sbjct: 154 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VAV++I+ Q + + E ++ + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + LV EY G + D+L E + +++ SA++Y
Sbjct: 80 EV---IETEKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQY 128
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD DM + DFG S +F + LD +P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSP 176
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VA+K+I+ Q + + E ++ + H N+ K+
Sbjct: 23 IGKGNFAKVKLARHILTGRE--VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + L+ EY G + D+L E S +++ SA++Y
Sbjct: 81 EV---IETEKTLY--LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------VSAVQY 129
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD DM + DFG S +F LD P
Sbjct: 130 CH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAP 177
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 139
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 140 -GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYKGIL-----GEDEMVVAVKVINLKQKGAFRS-FVAE 93
E+S + F + +G+ +G VYKG L GE VA+K + K +G R F E
Sbjct: 5 EISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 62
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEV----- 148
++H N+ ++ + + +++F Y +G L ++L + H +V
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPL-----SMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 149 -----FKLSLIQRVNIAIDVASAIEYL--HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDF 201
L V++ +A+ +EYL HH +VH D+ NVL+ + + + D
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDL 172
Query: 202 GLSK 205
GL +
Sbjct: 173 GLFR 176
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF-RSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 135
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 136 -GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH 178
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 135
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 136 -GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+K I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIA 160
N+ K++ + + + LVFE++ + D T L + K L Q
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQ----- 110
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 111 --LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 139
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 140 -GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 135
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 136 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 178
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 27/193 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK---QKGAFRSFVAECEALRNIRHR 103
+F ++G+GS+ +V A+K++ + ++ E + + + H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 104 NLTKIITICSSIDSKGADFKALVF--EYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
K+ C D K L F Y +NG L ++ + E R A
Sbjct: 98 FFVKLY-FCFQDDEK------LYFGLSYAKNGELLKYIRKIGSFDET-----CTRFYTA- 144
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
++ SA+EYLH ++H D+KP N+LL+ DM + DFG +K LS + +
Sbjct: 145 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX--- 198
Query: 222 SIGIKGTVGYVAP 234
GT YV+P
Sbjct: 199 ---FVGTAQYVSP 208
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILR--------- 139
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 140 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 41 LSKATCEFSQSNMIGQGSYGSVYKGI-LGEDEMVVAVKVINLK--QKGAFRSFVAECEAL 97
L +A ++ IG+G+YG V+K L VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 98 RNIR---HRNLTKIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLS 152
R++ H N+ ++ +C+ + LVFE+++ + D + + E K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 153 LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ Q + +++LH + +VH D+KP N+L+ + + DFGL++ S
Sbjct: 126 MFQ-------LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF-RSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 135
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 136 -GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 41 LSKATCEFSQSNMIGQGSYGSVYKGI-LGEDEMVVAVKVINLK--QKGAFRSFVAECEAL 97
L +A ++ IG+G+YG V+K L VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 98 RNIR---HRNLTKIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLS 152
R++ H N+ ++ +C+ + LVFE+++ + D + + E K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 153 LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ Q + +++LH + +VH D+KP N+L+ + + DFGL++ S
Sbjct: 126 MFQ-------LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 41 LSKATCEFSQSNMIGQGSYGSVYKGI-LGEDEMVVAVKVINLK--QKGAFRSFVAECEAL 97
L +A ++ IG+G+YG V+K L VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 98 RNIR---HRNLTKIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLS 152
R++ H N+ ++ +C+ + LVFE+++ + D + + E K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 153 LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
+ Q + +++LH + +VH D+KP N+L+ + + DFGL++ S
Sbjct: 126 MFQ-------LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 54 IGQGSYGSVYKGI--LGEDEMVVAVKVINL-KQKGAFRSFVAECEALRNIRHRNLTKIIT 110
+G G++GSV +G+ + + ++ VA+KV+ +K + E + + + + + ++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+C A+ LV E G L +L + + V ++ + V+ ++YL
Sbjct: 78 VCQ------AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYL 126
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+ VH D+ NVLL N A + DFGLSK L +D
Sbjct: 127 E---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 137
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 138 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 180
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 139
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 140 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 140
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 141 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 183
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 141
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 142 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 184
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 132
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 133 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 175
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 139
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 140 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 140
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 141 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 183
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 105
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 106 TKIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
I I + + +V + ME L H +NDH+ F +++
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------- 155
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 156 --GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 198
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 133
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 134 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 69 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 114
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + +FG S S T
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT--- 168
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 169 -------LCGTLDYLPP 178
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 51 SNMIGQGSYGSVYKGILGEDEMVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
S+++GQG+ +V++G + + A+KV N+ + E E L+ + H+N+ K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
I ++ K L+ E+ GSL L + ++ + L + + + DV + +
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNH 127
Query: 170 LHHNCQPPMVHGDIKPSNVLL----DNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGI 225
L N +VH +IKP N++ D V + DFG ++ L D + +
Sbjct: 128 LRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---------EQFVSL 175
Query: 226 KGTVGYVAP 234
GT Y+ P
Sbjct: 176 YGTEEYLHP 184
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 133
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 134 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 143
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 144 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 186
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 135
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 136 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 178
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNI 100
A +F +G+G +G+VY + + ++A+KV+ L++ G E E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI--QRVN 158
RH N+ ++ A L+ EY G++ + E+ KLS QR
Sbjct: 68 RHPNILRLYGYFHD-----ATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 113
Query: 159 IAI-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I ++A+A+ Y H ++H DIKP N+LL + + +FG S S T
Sbjct: 114 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT--- 167
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT+ Y+ P
Sbjct: 168 -------LCGTLDYLPP 177
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 23 PIDTLPMEKQFPMVSYAELSKATCEFSQSNMI------GQGSYGSVYKGI--LGEDEMVV 74
P+DT E P EL + N++ G G++GSV +G+ + + ++ V
Sbjct: 309 PMDTSVFES--PFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDV 366
Query: 75 AVKVINL-KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
A+KV+ +K + E + + + + + ++I +C A+ LV E G
Sbjct: 367 AIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AEALMLVMEMAGGG 420
Query: 134 SLEDWLHQTNDHLEVFKLS-LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDN 192
L +L + + V ++ L+ +V++ + ++H N + NVLL N
Sbjct: 421 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN---------LAARNVLLVN 471
Query: 193 DMVAHVGDFGLSKFLSSD 210
A + DFGLSK L +D
Sbjct: 472 RHYAKISDFGLSKALGAD 489
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 53 MIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITIC 112
++G+G+YG VY G +++ +A+K I + + E ++++H+N I+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN---IVQYL 85
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQT----NDHLEVFKLSLIQRVNIAIDVASAIE 168
S G F + E + GSL L D+ + Q + ++
Sbjct: 86 GSFSENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-------ILEGLK 136
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDN-DMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
YLH N +VH DIK NVL++ V + DFG SK L+ ++ +ET G
Sbjct: 137 YLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTET------FTG 185
Query: 228 TVGYVAP 234
T+ Y+AP
Sbjct: 186 TLQYMAP 192
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 27/167 (16%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G G V+ + + + VA+K I L + + + E + +R + H N+ K+ I
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 114 SIDSKGADFKA---------LVFEYMENGSLEDWLHQ---TNDHLEVFKLSLIQRVNIAI 161
S+ D +V EYME L + L Q +H +F L++
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLR------ 131
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDN-DMVAHVGDFGLSKFL 207
++Y+H ++H D+KP+N+ ++ D+V +GDFGL++ +
Sbjct: 132 ----GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 51 SNMIGQGSYGSVYKGILGEDEMVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
S+++GQG+ +V++G + + A+KV N+ + E E L+ + H+N+ K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
I ++ K L+ E+ GSL L + ++ + L + + + DV + +
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNH 127
Query: 170 LHHNCQPPMVHGDIKPSNVLL----DNDMVAHVGDFGLSKFLSSD 210
L N +VH +IKP N++ D V + DFG ++ L D
Sbjct: 128 LRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNIRHR 103
+F +G+G +G+VY +++ ++A+KV+ L+++G E E ++RH
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ ++ D K L+ E+ G L L + E + ++ ++
Sbjct: 75 NILRMYNYFH--DRKRI---YLMLEFAPRGELYKELQKHGRFDEQRSATFME------EL 123
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
A A+ Y H ++H DIKP N+L+ + DFG S
Sbjct: 124 ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNIRHR 103
+F +G+G +G+VY +++ ++A+KV+ L+++G E E ++RH
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ ++ D K L+ E+ G L L + E + ++ ++
Sbjct: 76 NILRMYNYFH--DRKRI---YLMLEFAPRGELYKELQKHGRFDEQRSATFME------EL 124
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
A A+ Y H ++H DIKP N+L+ + DFG S
Sbjct: 125 ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 105
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 106 TKIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
I I + + +V + ME L H +NDH+ F +++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------- 137
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 138 --GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 180
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q AF++ E + +R + H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 132
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q AF++ E + +R + H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 132
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 53 MIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITIC 112
++G+G+YG VY G +++ +A+K I + + E ++++H+N I+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN---IVQYL 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQT----NDHLEVFKLSLIQRVNIAIDVASAIE 168
S G F + E + GSL L D+ + Q + ++
Sbjct: 72 GSFSENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-------ILEGLK 122
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDN-DMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
YLH N +VH DIK NVL++ V + DFG SK L+ ++ +ET G
Sbjct: 123 YLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTET------FTG 171
Query: 228 TVGYVAP 234
T+ Y+AP
Sbjct: 172 TLQYMAP 178
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 86/205 (41%), Gaps = 38/205 (18%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN---LKQKGAFRSFVAE 93
++AE C M+G+GS+G V K + AVKVIN K K + + E
Sbjct: 19 TFAERYNIVC------MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILRE 71
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
E L+ + H N+ K+ I S +V E G L D + + + S
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSF-----YIVGELYTGGELFDEIIKRK------RFSE 120
Query: 154 IQRVNIAIDVASAIEYLH-HNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSS 209
I V S I Y+H HN +VH D+KP N+LL++ D + DFGLS
Sbjct: 121 HDAARIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLS----- 171
Query: 210 DHLDTASETPSSSIGIKGTVGYVAP 234
T + + GT Y+AP
Sbjct: 172 ----TCFQQNTKMKDRIGTAYYIAP 192
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 86/205 (41%), Gaps = 38/205 (18%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN---LKQKGAFRSFVAE 93
++AE C M+G+GS+G V K + AVKVIN K K + + E
Sbjct: 19 TFAERYNIVC------MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILRE 71
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
E L+ + H N+ K+ I S +V E G L D + + + S
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSF-----YIVGELYTGGELFDEIIKRK------RFSE 120
Query: 154 IQRVNIAIDVASAIEYLH-HNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSS 209
I V S I Y+H HN +VH D+KP N+LL++ D + DFGLS
Sbjct: 121 HDAARIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLS----- 171
Query: 210 DHLDTASETPSSSIGIKGTVGYVAP 234
T + + GT Y+AP
Sbjct: 172 ----TCFQQNTKMKDRIGTAYYIAP 192
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 114 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 164
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + + GT YV+P
Sbjct: 165 LLNEDMHIQITDFGTAKVLSPESKQARANS------FVGTAQYVSP 204
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G++G VYK E ++ A KVI+ K + ++ E + L + H N+ K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
++ ++ E+ G+++ + + L ++ ++ + + A+ YLH N
Sbjct: 105 YENNLW-----ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLHDN 154
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K N+L D + DFG+S
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+ I L + +G + + E L+ + H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE---VVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 62 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 111
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Query: 48 FSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINL--KQKGAFRSFVAECEALRNIRH 102
F + IG+G+YG VYK + GE VVA+ I L + +G + + E L+ + H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE---VVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K++ + + + LVFE++ L+ ++ + L L LI+ +
Sbjct: 61 PNIVKLLDVIHTENKL-----YLVFEFLHQ-DLKKFMDASA--LTGIPLPLIK--SYLFQ 110
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ + + H + ++H D+KP N+L++ + + DFGL++
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G++G VYK E ++ A KVI+ K + ++ E + L + H N+ K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
++ ++ E+ G+++ + + L ++ ++ + + A+ YLH N
Sbjct: 105 YENNLW-----ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLHDN 154
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K N+L D + DFG+S
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 110 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 160
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + + GT YV+P
Sbjct: 161 LLNEDMHIQITDFGTAKVLSPESKQARANS------FVGTAQYVSP 200
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G++G VYK E ++ A KVI+ K + ++ E + L + H N+ K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
++ ++ E+ G+++ + + L ++ ++ + + A+ YLH N
Sbjct: 105 YENNLW-----ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLHDN 154
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
++H D+K N+L D + DFG+S
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 105
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 106 TKIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
I I + + +V + ME L H +NDH+ F +++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR-------- 137
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 138 --GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDH 180
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 91 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 141
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 142 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 181
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLT 106
++ + IG+G+YG V +++ VA++ I+ + + + + E + L RH N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 107 KIITICSSIDSKGADFKALVFEYMENG--SLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
I I + + +V + ME L H +NDH+ F +++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR--------- 139
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 140 -GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 90 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 140
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 141 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 180
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 89 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 139
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + S+ ++ + GT YV+P
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPE-----SKQARANXFV-GTAQYVSP 179
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 86/205 (41%), Gaps = 38/205 (18%)
Query: 37 SYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN---LKQKGAFRSFVAE 93
++AE C M+G+GS+G V K + AVKVIN K K + + E
Sbjct: 19 TFAERYNIVC------MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILRE 71
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
E L+ + H N+ K+ I S +V E G L D + + + S
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSF-----YIVGELYTGGELFDEIIKRK------RFSE 120
Query: 154 IQRVNIAIDVASAIEYLH-HNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSS 209
I V S I Y+H HN +VH D+KP N+LL++ D + DFGLS
Sbjct: 121 HDAARIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIIDFGLS----- 171
Query: 210 DHLDTASETPSSSIGIKGTVGYVAP 234
T + + GT Y+AP
Sbjct: 172 ----TCFQQNTKMKDRIGTAYYIAP 192
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 88 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 138
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + S+ ++ + GT YV+P
Sbjct: 139 LLNEDMHIQITDFGTAKVLSPE-----SKQARANXFV-GTAQYVSP 178
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
++ SA+EYLH ++H D+KP N+LL+ DM + DFG +K LS + + +
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS--- 193
Query: 222 SIGIKGTVGYVAP 234
GT YV+P
Sbjct: 194 ---FVGTAQYVSP 203
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 111 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 161
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + + GT YV+P
Sbjct: 162 LLNEDMHIQITDFGTAKVLSPE------SKQARANAFVGTAQYVSP 201
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNIRHR 103
+F +G+G +G+VY +++ ++A+KV+ L+++G E E ++RH
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ ++ D K L+ E+ G L L + E + ++ ++
Sbjct: 75 NILRMYNYFH--DRKRI---YLMLEFAPRGELYKELQKHGRFDEQRSATFME------EL 123
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
A A+ Y H ++H DIKP N+L+ + DFG S
Sbjct: 124 ADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q AF++ E + +R + H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 132
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 47 EFSQSNMIGQGSYGSVYKGIL---GED-EMVVAVKVI--NLKQKGAFRSFVAECEALRNI 100
E + ++G G++G+VYKGI GE+ ++ VA+KV+ N K A + + E + +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK-ANKEILDEAYVMAGV 76
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
+++++ IC + + LV + M G L D + + L L +N
Sbjct: 77 GSPYVSRLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGSQDL-----LNWC 125
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
+ +A + YL +VH D+ NVL+ + + DFGL++ L D
Sbjct: 126 MQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 173
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 32/220 (14%)
Query: 28 PMEKQFPMVSYAELSKATC-----------EFSQSNMIGQGSYGSVYKGILGEDEMVVAV 76
P+ ++ ++ Y E +K +F +IG+G++G V L + V A+
Sbjct: 45 PLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAM 104
Query: 77 KVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLE 136
K++N K + R+ A R++ +K IT + LV +Y G L
Sbjct: 105 KILN-KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL-YLVMDYYVGGDLL 162
Query: 137 DWLHQTNDHL--EVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDM 194
L + D L E+ + L + V IAID + Y VH DIKP N+L+D +
Sbjct: 163 TLLSKFEDRLPEEMARFYLAEMV-IAIDSVHQLHY---------VHRDIKPDNILMDMNG 212
Query: 195 VAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFG L D T SS+ + GT Y++P
Sbjct: 213 HIRLADFGSCLKLMEDG------TVQSSVAV-GTPDYISP 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 33/197 (16%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF---------RSFVAECEALR 98
+ ++G+G V + I AVK+I++ G+F + + E + LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 99 NIR-HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
+ H N II + + ++ F LVF+ M+ G L D+L E LS +
Sbjct: 79 KVSGHPN---IIQLKDTYETN--TFFFLVFDLMKKGELFDYL------TEKVTLSEKETR 127
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I + I LH + +VH D+KP N+LLD+DM + DFG S LD +
Sbjct: 128 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC-----QLDPGEK 179
Query: 218 TPSSSIGIKGTVGYVAP 234
S + GT Y+AP
Sbjct: 180 LRS----VCGTPSYLAP 192
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 95 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 145
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + S+ ++ + GT YV+P
Sbjct: 146 LLNEDMHIQITDFGTAKVLSPE-----SKQARANXFV-GTAQYVSP 185
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 111 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 161
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 162 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 201
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 27/195 (13%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKG--- 85
Q P E + +F ++ +G G++G V + LG+++ V+ V V LK
Sbjct: 34 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 86 AFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTND 144
+ ++E + + ++ +H N+ ++ C+ G ++ EY G L ++L + +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKSR 146
Query: 145 HLEV--------FKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMV 195
LE LS ++ + VA + +L NC +H D+ NVLL N V
Sbjct: 147 VLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHV 202
Query: 196 AHVGDFGLSKFLSSD 210
A +GDFGL++ + +D
Sbjct: 203 AKIGDFGLARDIMND 217
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 163
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 164 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 203
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 163
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 164 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 203
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
++ SA+EYLH ++H D+KP N+LL+ DM + DFG +K LS + S+ +
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----SKQARA 188
Query: 222 SIGIKGTVGYVAP 234
+ + GT YV+P
Sbjct: 189 NXFV-GTAQYVSP 200
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 114 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 164
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 165 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 204
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 111 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 161
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 162 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 201
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 116 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 166
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 167 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 206
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 111 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 161
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 162 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 201
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 163
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 164 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 203
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 151 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 204
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 205 XXKKTTNGRLPVK----WMAP 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 15/152 (9%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G +G V+ + VAVK + + +F+AE ++ ++H L K+ + +
Sbjct: 190 LGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ ++ E+M GSL D+L E K L + ++ + +A + ++
Sbjct: 248 K------EPIYIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMAFIE-- 295
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
Q +H D++ +N+L+ +V + DFGL++
Sbjct: 296 -QRNYIHRDLRAANILVSASLVCKIADFGLAR 326
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 163
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 164 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 203
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 129 YMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNV 188
Y +NG L ++ + E R A ++ SA+EYLH ++H D+KP N+
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI 163
Query: 189 LLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
LL+ DM + DFG +K LS + + GT YV+P
Sbjct: 164 LLNEDMHIQITDFGTAKVLSPESKQARANX------FVGTAQYVSP 203
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 21/189 (11%)
Query: 51 SNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFV-AECEALRNIR-HRNLTKI 108
S ++G+G+Y V + ++ AVK+I KQ G RS V E E L + ++N+ ++
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
I D++ LVFE ++ GS+ + Q H + S + R DVA+A++
Sbjct: 77 IEFFED-DTRF----YLVFEKLQGGSILAHI-QKQKHFNEREASRVVR-----DVAAALD 125
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDN-DMVAHVG--DFGLSKFLSSDHLDTASETPSSSIGI 225
+LH + H D+KP N+L ++ + V+ V DF L + ++ T TP +
Sbjct: 126 FLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 226 KGTVGYVAP 234
G+ Y+AP
Sbjct: 183 -GSAEYMAP 190
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKG--- 85
Q P E + +F ++ +G G++G V + LG+++ V+ V V LK
Sbjct: 26 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 83
Query: 86 AFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN- 143
+ ++E + + ++ +H N+ ++ C+ G ++ EY G L ++L +
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKAE 138
Query: 144 ---DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVG 199
D + L L ++ + VA + +L NC +H D+ NVLL N VA +G
Sbjct: 139 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIG 194
Query: 200 DFGLSKFLSSD 210
DFGL++ + +D
Sbjct: 195 DFGLARDIMND 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 52 NMIGQGSYGSVYKGIL---GEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNLTK 107
+IG+G +G VY G ++ + A+K ++ + + +F+ E +R + H N+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+I I + +G ++ YM +G L ++ + V L ++ + VA +
Sbjct: 87 LIGIM--LPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVARGM 137
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
EYL + VH D+ N +LD V DFGL++ + + + + + +K
Sbjct: 138 EYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 228 T 228
T
Sbjct: 195 T 195
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKG--- 85
Q P E + +F ++ +G G++G V + LG+++ V+ V V LK
Sbjct: 34 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 86 AFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN- 143
+ ++E + + ++ +H N+ ++ C+ G ++ EY G L ++L +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKAE 146
Query: 144 ---DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVG 199
D + L L ++ + VA + +L NC +H D+ NVLL N VA +G
Sbjct: 147 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIG 202
Query: 200 DFGLSKFLSSD 210
DFGL++ + +D
Sbjct: 203 DFGLARDIMND 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 11/155 (7%)
Query: 47 EFSQSNMI---GQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHR 103
+F Q N + + G ++KG +++VV V + R F EC LR H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ ++ C S A L+ + GSL + LH+ + F + Q V A+D
Sbjct: 68 NVLPVLGACQ---SPPAPHPTLITHWXPYGSLYNVLHEGTN----FVVDQSQAVKFALDX 120
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHV 198
A +L H +P + + +V +D D A +
Sbjct: 121 ARGXAFL-HTLEPLIPRHALNSRSVXIDEDXTARI 154
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 41 LSKATCEFSQSNMI-----GQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGA---FRS 89
L EF + N++ G+G +G V K L V V LK+ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 90 FVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN------ 143
++E L+ + H ++ K+ CS L+ EY + GSL +L ++
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 144 ------------DHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD 191
DH + L++ ++ A ++ ++YL + +VH D+ N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 192 NDMVAHVGDFGLSK 205
+ DFGLS+
Sbjct: 185 EGRKMKISDFGLSR 198
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 50 QSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFV-AECEALRNIR-HRNLTK 107
Q +++G+G++ V I AVK+I KQ G RS V E E L + HRN+ +
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+I D LVFE M GS+ +H+ E+ ++Q DVASA+
Sbjct: 76 LIEFFEEEDRF-----YLVFEKMRGGSILSHIHKRRHFNELEASVVVQ------DVASAL 124
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDN-DMVAHVG--DFGLSKFLSSDHLDTASETPSSSIG 224
++LH+ + H D+KP N+L ++ + V+ V DF L + + + TP +
Sbjct: 125 DFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP-ELLT 180
Query: 225 IKGTVGYVAP 234
G+ Y+AP
Sbjct: 181 PCGSAEYMAP 190
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINL-----KQKGAFRSFVAECEALRNIRHRNLTKI 108
IG+GS+G ED +K IN+ K++ R VA L N++H N I
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA---VLANMKHPN---I 85
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ S + G+ + +V +Y E G D + N V Q ++ + + A++
Sbjct: 86 VQYRESFEENGSLY--IVMDYCEGG---DLFKRINAQKGVL-FQEDQILDWFVQICLALK 139
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
++H ++H DIK N+ L D +GDFG+++ L+S
Sbjct: 140 HVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 41 LSKATCEFSQSNMI-----GQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGA---FRS 89
L EF + N++ G+G +G V K L V V LK+ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 90 FVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN------ 143
++E L+ + H ++ K+ CS L+ EY + GSL +L ++
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 144 ------------DHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD 191
DH + L++ ++ A ++ ++YL + +VH D+ N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 192 NDMVAHVGDFGLSK 205
+ DFGLS+
Sbjct: 185 EGRKMKISDFGLSR 198
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 74/150 (49%), Gaps = 22/150 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGE-------DEMVVAVKVINLKQKGAFRSFVAECEALRNI 100
F++S +GQG++ ++KG+ E E V +KV++ + SF + +
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
H++L +C D LV E+++ GSL+ +L + + + + + ++ +A
Sbjct: 70 SHKHLVLNYGVCVC-----GDENILVQEFVKFGSLDTYLKKNKNCINI-----LWKLEVA 119
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+A+A+ +L N ++HG++ N+LL
Sbjct: 120 KQLAAAMHFLEENT---LIHGNVCAKNILL 146
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 41 LSKATCEFSQSNMI-----GQGSYGSVYKGI---LGEDEMVVAVKVINLKQKGA---FRS 89
L EF + N++ G+G +G V K L V V LK+ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 90 FVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN------ 143
++E L+ + H ++ K+ CS L+ EY + GSL +L ++
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 144 ------------DHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD 191
DH + L++ ++ A ++ ++YL + +VH D+ N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVA 184
Query: 192 NDMVAHVGDFGLSK 205
+ DFGLS+
Sbjct: 185 EGRKMKISDFGLSR 198
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 49/206 (23%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS---------FVAECEAL 97
E+ S +G G+ G V + VA+K+I+ K+K A S E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 69
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED------WLHQTNDHLEVFKL 151
+ + H + KI + D +V E ME G L D L + L +++
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLS 208
L A++YLH N ++H D+KP NVLL + D + + DFG SK L
Sbjct: 124 LL------------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
L + GT Y+AP
Sbjct: 169 ETSLMRT---------LCGTPTYLAP 185
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 49/206 (23%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS---------FVAECEAL 97
E+ S +G G+ G V + VA+K+I+ K+K A S E E L
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 68
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED------WLHQTNDHLEVFKL 151
+ + H + KI + D +V E ME G L D L + L +++
Sbjct: 69 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLS 208
L A++YLH N ++H D+KP NVLL + D + + DFG SK L
Sbjct: 123 LL------------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 167
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
L + GT Y+AP
Sbjct: 168 ETSLMRT---------LCGTPTYLAP 184
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 49/206 (23%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS---------FVAECEAL 97
E+ S +G G+ G V + VA+K+I+ K+K A S E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 69
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED------WLHQTNDHLEVFKL 151
+ + H + KI + D +V E ME G L D L + L +++
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLS 208
L A++YLH N ++H D+KP NVLL + D + + DFG SK L
Sbjct: 124 LL------------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
L + GT Y+AP
Sbjct: 169 ETSLMRT---------LCGTPTYLAP 185
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 49/206 (23%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS---------FVAECEAL 97
E+ S +G G+ G V + VA+K+I+ K+K A S E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 69
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED------WLHQTNDHLEVFKL 151
+ + H + KI + D +V E ME G L D L + L +++
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLS 208
L A++YLH N ++H D+KP NVLL + D + + DFG SK L
Sbjct: 124 LL------------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
L + GT Y+AP
Sbjct: 169 ETSLMRT---------LCGTPTYLAP 185
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H++ ++I+ V+ V+ ++Y
Sbjct: 79 GICE------AESWMLVMEMAELGPLNKYLQQ-NRHVK--DKNIIELVH---QVSMGMKY 126
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTV 229
L + VH D+ NVLL A + DFGLSK L +D ++T K V
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG-----KWPV 178
Query: 230 GYVAP 234
+ AP
Sbjct: 179 KWYAP 183
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 30/202 (14%)
Query: 42 SKATC------EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK---QKGAFRSFVA 92
S ATC +F N++G+GS+ VY+ + VA+K+I+ K + G +
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 93 ECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLS 152
E + ++H ++ ++ + +++ LV E NG + +L V S
Sbjct: 61 EVKIHCQLKHPSILELYNYF-----EDSNYVYLVLEMCHNGEMNRYLKN-----RVKPFS 110
Query: 153 LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHL 212
+ + + + + YLH + ++H D+ SN+LL +M + DFGL+ L H
Sbjct: 111 ENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH- 166
Query: 213 DTASETPSSSIGIKGTVGYVAP 234
+ GT Y++P
Sbjct: 167 -------EKHYTLCGTPNYISP 181
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 132
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 49/206 (23%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS---------FVAECEAL 97
E+ S +G G+ G V + VA+K+I+ K+K A S E E L
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 75
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED------WLHQTNDHLEVFKL 151
+ + H + KI + D +V E ME G L D L + L +++
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLS 208
L A++YLH N ++H D+KP NVLL + D + + DFG SK L
Sbjct: 130 LL------------AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 174
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
L + GT Y+AP
Sbjct: 175 ETSLMRT---------LCGTPTYLAP 191
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN-LKQKGAFRSFVAECEALRNIRHRNL 105
++ + IG+G+YG V +++ VA+K I+ + + + + E + L RH N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 106 TKIITICSSIDSKGADFKALVFEYM--ENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
I I + + LV M + L H +NDH+ F +++
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILR-------- 155
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+LL+ + DFGL++ DH
Sbjct: 156 --GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 198
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 22/170 (12%)
Query: 46 CEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHR 103
E + +IG G +G VY+ DE+ V + + + E + ++H
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ + +C + LV E+ G L N L ++ VN A+ +
Sbjct: 67 NIIALRGVCLKEPNL-----CLVMEFARGGPL-------NRVLSGKRIPPDILVNWAVQI 114
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLL-----DNDM---VAHVGDFGLSK 205
A + YLH P++H D+K SN+L+ + D+ + + DFGL++
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 151 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 204
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 205 YYKKTTNGRLPVK----WMAP 221
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 151 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 204
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 205 YYKKTTNGRLPVK----WMAP 221
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 81 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 136 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 189
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 190 YYKKTTNGRLPVK----WMAP 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 37/204 (18%)
Query: 38 YAELSKATCEFSQSNMIGQGSYGSVYKG---ILGEDEMVVAVKVINLKQKGA-FRSFVAE 93
Y EL K + IG G + V + GE +VA+K+++ G+ E
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGE---MVAIKIMDKNTLGSDLPRIKTE 58
Query: 94 CEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL 153
EAL+N+RH+++ ++ + + A+ +V EY G L D++ + D L + +
Sbjct: 59 IEALKNLRHQHICQLYHVLET-----ANKIFMVLEYCPGGELFDYI-ISQDRLSEEETRV 112
Query: 154 IQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGL---SKFLSSD 210
+ R + SA+ Y+H H D+KP N+L D + DFGL K
Sbjct: 113 VFR-----QIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164
Query: 211 HLDTASETPSSSIGIKGTVGYVAP 234
HL T G++ Y AP
Sbjct: 165 HLQTCC----------GSLAYAAP 178
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H++ ++I+ V+ V+ ++Y
Sbjct: 75 GICE------AESWMLVMEMAELGPLNKYLQQ-NRHVK--DKNIIELVH---QVSMGMKY 122
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTV 229
L + VH D+ NVLL A + DFGLSK L +D ++T K V
Sbjct: 123 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 174
Query: 230 GYVAP 234
+ AP
Sbjct: 175 KWYAP 179
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 132
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 132
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 89 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 144 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 197
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 198 YYKKTTNGRLPVK----WMAP 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H V ++I+ V+ V+ ++Y
Sbjct: 85 GICE------AESWMLVMEMAELGPLNKYLQQ-NRH--VKDKNIIELVH---QVSMGMKY 132
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTV 229
L + VH D+ NVLL A + DFGLSK L +D ++T K V
Sbjct: 133 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 184
Query: 230 GYVAP 234
+ AP
Sbjct: 185 KWYAP 189
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 151 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 204
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 205 YYKKTTNGRLPVK----WMAP 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 39 AELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEA 96
A ++ T ++ +G+G++ V + + A K+IN K+ A + E
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 97 LRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
R ++H N I+ + SI +G F LVF+ + G L + ++
Sbjct: 84 CRLLKHPN---IVRLHDSISEEG--FHYLVFDLVTGGELFE---------DIVAREYYSE 129
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDND---MVAHVGDFGLSKFLSSDHLD 213
+ + + +E ++H Q +VH D+KP N+LL + + DFGL+ + +
Sbjct: 130 ADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-- 187
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+ G GT GY++P
Sbjct: 188 ------QAWFGFAGTPGYLSP 202
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 88 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 143 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 196
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 197 YYKKTTNGRLPVK----WMAP 213
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 132
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 78
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 133
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+GS G V VAVK ++L+++ E +R+ H N ++ + S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN---VVDMYS 109
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
S D +V E++E G+L D + T + E Q + + V A+ YLH+
Sbjct: 110 SYLV--GDELWVVMEFLEGGALTDIVTHTRMNEE-------QIATVCLSVLRALSYLHNQ 160
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
++H DIK ++LL +D + DFG +S E P + GT ++A
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVS-------KEVPKRKX-LVGTPYWMA 209
Query: 234 P 234
P
Sbjct: 210 P 210
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 23 PIDTLPMEKQF-------PMVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVA 75
P+DT E F P Y + T E + +G G++G+V KG ++V
Sbjct: 342 PMDTEVFESPFADPEEIRPKEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQMKKVVKT 398
Query: 76 VKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYME 131
V V LK + A + +AE ++ + + + ++I IC A+ LV E E
Sbjct: 399 VAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVMEMAE 452
Query: 132 NGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD 191
G L +L Q N H++ + + + V+ ++YL + VH D+ NVLL
Sbjct: 453 LGPLNKYLQQ-NRHVKDKNI-----IELVHQVSMGMKYLEESN---FVHRDLAARNVLLV 503
Query: 192 NDMVAHVGDFGLSKFLSSD 210
A + DFGLSK L +D
Sbjct: 504 TQHYAKISDFGLSKALRAD 522
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 85 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 140 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 193
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 194 YYKKTTNGRLPVK----WMAP 210
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 90
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 145
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 96
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 151
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 85
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 140
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 81
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 136
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H++ ++I+ V+ V+ ++Y
Sbjct: 79 GICE------AESWMLVMEMAELGPLNKYLQQ-NRHVK--DKNIIELVH---QVSMGMKY 126
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTV 229
L + VH D+ NVLL A + DFGLSK L +D ++T K V
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 178
Query: 230 GYVAP 234
+ AP
Sbjct: 179 KWYAP 183
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 144
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 45 TCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRH 102
T E+ IG+G++ V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N I+ + SI +G F LVF+ + G L + + + E IQ++
Sbjct: 63 SN---IVRLHDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----- 112
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDND---MVAHVGDFGLSKFLSSDHLDTASETP 219
+E + H Q +VH D+KP N+LL + + DFGL+ + D
Sbjct: 113 ----LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-------- 160
Query: 220 SSSIGIKGTVGYVAP 234
+ G GT GY++P
Sbjct: 161 QAWFGFAGTPGYLSP 175
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 29/195 (14%)
Query: 46 CEFSQSNMIGQGSYGSVY--KGILGED-EMVVAVKVIN---LKQKGAFRSFVAECEALRN 99
+F ++GQGS+G V+ K I G D + A+KV+ LK + R+ + E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 82
Query: 100 IRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
+ H I+ + + ++G + L+ +++ G L L + EV + +
Sbjct: 83 VNH---PFIVKLHYAFQTEGKLY--LILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 132
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A ++A A+++LH +++ D+KP N+LLD + + DFGLSK S DH A
Sbjct: 133 A-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKA---- 183
Query: 220 SSSIGIKGTVGYVAP 234
GTV Y+AP
Sbjct: 184 ---YSFCGTVEYMAP 195
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H++ ++I+ V+ V+ ++Y
Sbjct: 73 GICE------AESWMLVMEMAELGPLNKYLQQ-NRHVK--DKNIIELVH---QVSMGMKY 120
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTV 229
L + VH D+ NVLL A + DFGLSK L +D ++T K V
Sbjct: 121 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 172
Query: 230 GYVAP 234
+ AP
Sbjct: 173 KWYAP 177
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE----MVVAVKVINLKQKGA---FRSFVAECEALRNI-RHRN 104
+G+G++G V +G D+ V V V LK ++E E ++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L H +LS
Sbjct: 137 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ A VA +EYL C +H D+ NVL+ D V + DFGL++ + H+D
Sbjct: 192 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIH--HID 245
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 246 YYKKTTNGRLPVK----WMAP 262
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 113
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL-IQRVNIAI-DVA 164
+ SS + K + LV +Y + + +++ H K +L + V + + +
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 166
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL-IQRVNIAI-DVA 164
+ SS + K + LV +Y + + +++ H K +L + V + + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF---------RSFVAECEALR 98
+ ++G+G V + I AVK+I++ G+F + + E + LR
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 99 NIR-HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
+ H N II + + ++ F LVF+ M+ G L D+L E LS +
Sbjct: 66 KVSGHPN---IIQLKDTYETNT--FFFLVFDLMKKGELFDYL------TEKVTLSEKETR 114
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I + I LH + +VH D+KP N+LLD+DM + DFG S LD +
Sbjct: 115 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC-----QLDPGEK 166
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 167 LRE----VCGTPSYLAP 179
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H++ ++I+ V+ V+ ++Y
Sbjct: 95 GICE------AESWMLVMEMAELGPLNKYLQQ-NRHVK--DKNIIELVH---QVSMGMKY 142
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTV 229
L + VH D+ NVLL A + DFGLSK L +D ++T K V
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 194
Query: 230 GYVAP 234
+ AP
Sbjct: 195 KWYAP 199
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H++ ++I+ V+ V+ ++Y
Sbjct: 95 GICE------AESWMLVMEMAELGPLNKYLQQ-NRHVK--DKNIIELVH---QVSMGMKY 142
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTV 229
L + VH D+ NVLL A + DFGLSK L +D ++T K V
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 194
Query: 230 GYVAP 234
+ AP
Sbjct: 195 KWYAP 199
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 33/197 (16%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF---------RSFVAECEALR 98
+ ++G+G V + I AVK+I++ G+F + + E + LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 99 NIR-HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
+ H N II + + ++ F LVF+ M+ G L D+L E LS +
Sbjct: 79 KVSGHPN---IIQLKDTYETNT--FFFLVFDLMKKGELFDYL------TEKVTLSEKETR 127
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
I + I LH + +VH D+KP N+LLD+DM + DFG S LD +
Sbjct: 128 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC-----QLDPGEK 179
Query: 218 TPSSSIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 180 LRE----VCGTPSYLAP 192
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 82
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 137
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 144
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 115
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL-IQRVNIAI-DVA 164
+ SS + K + LV +Y+ + +++ H K +L + V + + +
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYV-----PETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 105
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLH--QTNDHLEVFKLSLIQRVNIAIDVA 164
+ SS + K + LV +Y+ H + L V + L +
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-----YQLF 160
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H++ ++I+ V+ V+ ++Y
Sbjct: 93 GICE------AESWMLVMEMAELGPLNKYLQQ-NRHVK--DKNIIELVH---QVSMGMKY 140
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTV 229
L + VH D+ NVLL A + DFGLSK L +D ++T K V
Sbjct: 141 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 192
Query: 230 GYVAP 234
+ AP
Sbjct: 193 KWYAP 197
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 27/195 (13%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKG--- 85
Q P E + +F ++ +G G++G V + LG+++ V+ V V LK
Sbjct: 34 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 86 AFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTND 144
+ ++E + + ++ +H N+ ++ C+ G ++ EY G L ++L + +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKSR 146
Query: 145 HLEV---FKL-----SLIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMV 195
LE F + S ++ + VA + +L NC +H D+ NVLL N V
Sbjct: 147 VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHV 202
Query: 196 AHVGDFGLSKFLSSD 210
A +GDFGL++ + +D
Sbjct: 203 AKIGDFGLARDIMND 217
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ + +IG GS+G VY+ L + +VA+K + Q F++ E + +R + H N+ +
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 156
Query: 108 I-ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL-IQRVNIAI-DVA 164
+ SS + K + LV +Y + + +++ H K +L + V + + +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
++ Y+H + H DIKP N+LLD D V + DFG +K L
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLTKIITI 111
IG+G+YG VYK E A+K I L+++ G + + E L+ ++H N+ K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE--VFKLSLIQRVNIAIDVASAIEY 169
+ LVFE+++ L+ L LE K L+Q +N I Y
Sbjct: 69 IHTKKRL-----VLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLN-------GIAY 115
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
H ++H D+KP N+L++ + + DFGL++
Sbjct: 116 CHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGE-------DEMVVAVKVINLKQKGAFRSFVAECEALRNI 100
F++S +GQG++ ++KG+ E E V +KV++ + SF + +
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
H++L +C D LV E+++ GSL+ +L + + + + + ++ +A
Sbjct: 70 SHKHLVLNYGVCFC-----GDENILVQEFVKFGSLDTYLKKNKNCINI-----LWKLEVA 119
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+A A+ +L N ++HG++ N+LL
Sbjct: 120 KQLAWAMHFLEENT---LIHGNVCAKNILL 146
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLTKIITI 111
IG+G+YG VYK E A+K I L+++ G + + E L+ ++H N+ K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE--VFKLSLIQRVNIAIDVASAIEY 169
+ LVFE+++ L+ L LE K L+Q +N I Y
Sbjct: 69 IHT-----KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLN-------GIAY 115
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
H ++H D+KP N+L++ + + DFGL++
Sbjct: 116 CHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 28 PMEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ 83
PM ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KL 57
Query: 84 KGAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED 137
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 58 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 117
Query: 138 WLH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDM 194
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 118 IVKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDC 164
Query: 195 VAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 165 ELKILDFGL-----------ARHTDDEMTGYVATRWYRAP 193
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 19/161 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG---AFR-SFVAECEALRNIRHRNLTKII 109
+G G++G+V KG ++V V V LK + A + +AE ++ + + + ++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
IC A+ LV E E G L +L Q N H++ + + + V+ ++Y
Sbjct: 438 GICE------AESWMLVMEMAELGPLNKYLQQ-NRHVKDKNI-----IELVHQVSMGMKY 485
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
L + VH D+ NVLL A + DFGLSK L +D
Sbjct: 486 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 523
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLTKIITI 111
IG+G+YG VYK E A+K I L+++ G + + E L+ ++H N+ K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE--VFKLSLIQRVNIAIDVASAIEY 169
+ LVFE+++ L+ L LE K L+Q +N I Y
Sbjct: 69 IHTKKRL-----VLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLN-------GIAY 115
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
H ++H D+KP N+L++ + + DFGL++
Sbjct: 116 CHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 54 IGQGSYGSVY--KGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKII 109
IG+G++ V + IL E VAVK+I+ Q + + E + + H N+ K+
Sbjct: 22 IGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
+ I+++ + LV EY G + D+L E + +++ SA++Y
Sbjct: 80 EV---IETEKTLY--LVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI------VSAVQY 128
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS-KFLSSDHLDTASETP 219
H Q +VH D+K N+LLD D + DFG S +F + LD P
Sbjct: 129 CH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP 176
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 32/195 (16%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+FS +IG+G +G VY + + A+K ++ K R + + E L + R +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 243
Query: 107 KIIT-------ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
+++ +C S D + + + M G L H + + + ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL---------HYHLSQHGVFSEADM 294
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A I L H +V+ D+KP+N+LLD + D GL+ D + + P
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 220 SSSIGIKGTVGYVAP 234
+S+ GT GY+AP
Sbjct: 348 HASV---GTHGYMAP 359
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 32/195 (16%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+FS +IG+G +G VY + + A+K ++ K R + + E L + R +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 243
Query: 107 KIIT-------ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
+++ +C S D + + + M G L L Q VF + ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMR--FY 297
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A ++ +E++H+ +V+ D+KP+N+LLD + D GL+ D + + P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 220 SSSIGIKGTVGYVAP 234
+S+ GT GY+AP
Sbjct: 348 HASV---GTHGYMAP 359
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 23/167 (13%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
++ +IG GS+G V++ L E + V KV+ Q F++ E + +R ++H N+
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL---QDKRFKN--RELQIMRIVKHPNVVD 96
Query: 108 IITIC-SSIDSKGADFKALVFEYMENGSLEDWLH-----QTNDHLEVFKLSLIQRVNIAI 161
+ S+ D K F LV EY+ H QT L + KL + Q
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML-LIKLYMYQ------ 149
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDM-VAHVGDFGLSKFL 207
+ ++ Y+H + H DIKP N+LLD V + DFG +K L
Sbjct: 150 -LLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 32/195 (16%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+FS +IG+G +G VY + + A+K ++ K R + + E L + R +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 243
Query: 107 KIIT-------ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
+++ +C S D + + + M G L L Q VF + ++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMR--FY 297
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A ++ +E++H+ +V+ D+KP+N+LLD + D GL+ D + + P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 220 SSSIGIKGTVGYVAP 234
+S+ GT GY+AP
Sbjct: 348 HASV---GTHGYMAP 359
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 32/195 (16%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+FS +IG+G +G VY + + A+K ++ K R + + E L + R +
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 242
Query: 107 KIIT-------ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
+++ +C S D + + + M G L H + + + ++
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL---------HYHLSQHGVFSEADM 293
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A I L H +V+ D+KP+N+LLD + D GL+ D + + P
Sbjct: 294 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 346
Query: 220 SSSIGIKGTVGYVAP 234
+S+ GT GY+AP
Sbjct: 347 HASV---GTHGYMAP 358
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 37/197 (18%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS------FVAECEALRNIR 101
+ + +G G+YG V +L +D++ A + I + +K + + + E L+ +
Sbjct: 23 YQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H N+ K+ D + LV E G L D + K S + I
Sbjct: 80 HPNIMKLYEFFE--DKRNY---YLVMEVYRGGELFDEIILRQ------KFSEVDAAVIMK 128
Query: 162 DVASAIEYLH-HNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTASE 217
V S YLH HN +VH D+KP N+LL++ D + + DFGLS H + +
Sbjct: 129 QVLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVGGK 179
Query: 218 TPSSSIGIKGTVGYVAP 234
GT Y+AP
Sbjct: 180 MKERL----GTAYYIAP 192
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 33/195 (16%)
Query: 48 FSQSNMIGQGSYGS-VYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI-RHRNL 105
F +++G G+ G+ VY+G+ D VAVK I L + +F E + LR H N+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRI-LPECFSFAD--REVQLLRESDEHPNV 80
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN-DHLEVFKLSLIQRVNIAIDVA 164
+ C+ D + F+ + E + +L++++ Q + HL + ++L+Q+
Sbjct: 81 IRYF--CTEKDRQ---FQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTT------ 128
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLD-----NDMVAHVGDFGLSKFLSSDHLDTASETP 219
S + +LH +VH D+KP N+L+ + A + DFGL K L+ +
Sbjct: 129 SGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA-----VGRHSF 180
Query: 220 SSSIGIKGTVGYVAP 234
S G+ GT G++AP
Sbjct: 181 SRRSGVPGTEGWIAP 195
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 29/195 (14%)
Query: 46 CEFSQSNMIGQGSYGSVY--KGILGED-EMVVAVKVIN---LKQKGAFRSFVAECEALRN 99
+F ++GQGS+G V+ K I G D + A+KV+ LK + R+ + E + L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 83
Query: 100 IRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
+ H I+ + + ++G + L+ +++ G L L + EV + +
Sbjct: 84 VNH---PFIVKLHYAFQTEGKLY--LILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 133
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A ++A A+++LH +++ D+KP N+LLD + + DFGLSK S DH
Sbjct: 134 A-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDH-------E 181
Query: 220 SSSIGIKGTVGYVAP 234
+ GTV Y+AP
Sbjct: 182 KKAYSFCGTVEYMAP 196
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 52 NMIGQGSYGSVYKGIL-GEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLTKI 108
+IG+G +G VY G GE VA+++I++++ + ++F E A R RH N+
Sbjct: 39 ELIGKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ C S A++ + +L + L+V K IA ++ +
Sbjct: 95 MGACMS-----PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR-----QIAQEIVKGMG 144
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGL 203
YLH ++H D+K NV DN V + DFGL
Sbjct: 145 YLHAKG---ILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 10/162 (6%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLT 106
F ++G G+YG VYKG + + A+KV+++ E L+ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 107 KIITICSSIDSKGADFK-ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
+ G D + LV E+ GS+ D + T K + ++ IA
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-------KGNTLKEEWIAYICRE 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
+ L H Q ++H DIK NVLL + + DFG+S L
Sbjct: 138 ILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 29/195 (14%)
Query: 46 CEFSQSNMIGQGSYGSVY--KGILGED-EMVVAVKVIN---LKQKGAFRSFVAECEALRN 99
+F ++GQGS+G V+ K I G D + A+KV+ LK + R+ + E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 82
Query: 100 IRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
+ H I+ + + ++G + L+ +++ G L L + EV + +
Sbjct: 83 VNH---PFIVKLHYAFQTEGKLY--LILDFLRGGDLFTRLSK-----EVMFTEEDVKFYL 132
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A ++A A+++LH +++ D+KP N+LLD + + DFGLSK S DH A
Sbjct: 133 A-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKA---- 183
Query: 220 SSSIGIKGTVGYVAP 234
GTV Y+AP
Sbjct: 184 ---YSFCGTVEYMAP 195
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 64
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 65 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 116
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 53 MIGQ-GSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITI 111
+IG+ G +G VYK E ++ A KVI+ K + ++ E + L + H N+ K++
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
++ ++ E+ G+++ + + L ++ ++ + + A+ YLH
Sbjct: 76 FYYENNLW-----ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLH 125
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
N ++H D+K N+L D + DFG+S
Sbjct: 126 DN---KIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 64
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 65 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 116
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V K +++A K+I+L+ K A R+ + L+ + N
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 74
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 75 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKEAKRIPE----EILGKVSIA--VLRG 126
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+ YL Q ++H D+KPSN+L+++ + DFG+S L +D+ + +
Sbjct: 127 LAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANS------FV 174
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 175 GTRSYMAP 182
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 64
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 65 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 116
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 126
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 127 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 178
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 179 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+GS G V + +VAVK ++L+++ E +R+ +H N+ ++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 88
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D +V E++E G+L D + T + E Q + + V A+ LH
Sbjct: 89 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 139
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
++H DIK ++LL +D + DFG +S E P + GT ++A
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLV-GTPYWMA 188
Query: 234 P 234
P
Sbjct: 189 P 189
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 26/172 (15%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF-RSFVAECEALRNIRHRNLT 106
++Q IG+G+YG V + VA+K I+ + + + + E + L RH N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQ-------TNDHLEVFKLSLIQRVNI 159
I I + + +A+ Y+ +E L++ +NDH+ F +++
Sbjct: 105 GIRDIL-----RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILR---- 155
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDH 211
++Y+H ++H D+KPSN+L++ + DFGL++ +H
Sbjct: 156 ------GLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEH 198
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+GS G V + +VAVK ++L+++ E +R+ +H N+ ++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 84
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D +V E++E G+L D + T + E Q + + V A+ LH
Sbjct: 85 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 135
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
++H DIK ++LL +D + DFG +S E P + GT ++A
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLV-GTPYWMA 184
Query: 234 P 234
P
Sbjct: 185 P 185
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 64
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 65 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 116
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 49/206 (23%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS---------FVAECEAL 97
E+ S +G G+ G V + VA+++I+ K+K A S E E L
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIIS-KRKFAIGSAREADPALNVETEIEIL 208
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED------WLHQTNDHLEVFKL 151
+ + H + KI + D +V E ME G L D L + L +++
Sbjct: 209 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLS 208
L A++YLH N ++H D+KP NVLL + D + + DFG SK L
Sbjct: 263 LL------------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 307
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
L + GT Y+AP
Sbjct: 308 ETSLMRT---------LCGTPTYLAP 324
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 64
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 65 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 116
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 45 TCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRH 102
T E+ +G+G++ V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N I+ + SI +G F LVF+ + G L + + + E IQ++
Sbjct: 63 PN---IVRLHDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----- 112
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLSSDHLDTASETP 219
+E ++H +VH D+KP N+LL + DFGL+ + D
Sbjct: 113 ----LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-------- 160
Query: 220 SSSIGIKGTVGYVAP 234
+ G GT GY++P
Sbjct: 161 QAWFGFAGTPGYLSP 175
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+GS G V + +VAVK ++L+++ E +R+ +H N+ ++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 93
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D +V E++E G+L D + T + E Q + + V A+ LH
Sbjct: 94 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 144
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
++H DIK ++LL +D + DFG +S E P + GT ++A
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLV-GTPYWMA 193
Query: 234 P 234
P
Sbjct: 194 P 194
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+GS G V + +VAVK ++L+++ E +R+ +H N+ ++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 95
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D +V E++E G+L D + T + E Q + + V A+ LH
Sbjct: 96 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 146
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
++H DIK ++LL +D + DFG +S E P + GT ++A
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKXLV-GTPYWMA 195
Query: 234 P 234
P
Sbjct: 196 P 196
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 49/206 (23%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS---------FVAECEAL 97
E+ S +G G+ G V + VA+++I+ K+K A S E E L
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIIS-KRKFAIGSAREADPALNVETEIEIL 194
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLED------WLHQTNDHLEVFKL 151
+ + H + KI + D +V E ME G L D L + L +++
Sbjct: 195 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLS 208
L A++YLH N ++H D+KP NVLL + D + + DFG SK L
Sbjct: 249 LL------------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
L + GT Y+AP
Sbjct: 294 ETSLMRT---------LCGTPTYLAP 310
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 45 TCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRH 102
T E+ +G+G++ V + + A K+IN K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N I+ + SI +G F LVF+ + G L + + + E IQ++
Sbjct: 63 PN---IVRLHDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----- 112
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLSSDHLDTASETP 219
+E ++H +VH D+KP N+LL + DFGL+ + D
Sbjct: 113 ----LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-------- 160
Query: 220 SSSIGIKGTVGYVAP 234
+ G GT GY++P
Sbjct: 161 QAWFGFAGTPGYLSP 175
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 67
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 68 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 119
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 120 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 29/197 (14%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKG--- 85
Q P E + +F ++ +G G++G V + LG+++ V+ V V LK
Sbjct: 34 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 86 AFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN- 143
+ ++E + + ++ +H N+ ++ C+ G ++ EY G L ++L +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKRP 146
Query: 144 ---------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDND 193
H +LS ++ + VA + +L NC +H D+ NVLL N
Sbjct: 147 PGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNG 202
Query: 194 MVAHVGDFGLSKFLSSD 210
VA +GDFGL++ + +D
Sbjct: 203 HVAKIGDFGLARDIMND 219
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 91
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 92 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 143
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 144 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 41/199 (20%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS------FVAECEALRNIR 101
+ + +G G+YG V +L +D++ A + I + +K + + + E L+ +
Sbjct: 6 YQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW--LHQTNDHLEVFKLSLIQRVNI 159
H N+ K+ D + LV E G L D L Q K S + I
Sbjct: 63 HPNIMKLYEFFE--DKRNY---YLVMEVYRGGELFDEIILRQ--------KFSEVDAAVI 109
Query: 160 AIDVASAIEYLH-HNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTA 215
V S YLH HN +VH D+KP N+LL++ D + + DFGLS H +
Sbjct: 110 MKQVLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSA-----HFEVG 160
Query: 216 SETPSSSIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 161 GKMKERL----GTAYYIAP 175
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G+G+YG V K ++AVK I R+ V E R + +++ C
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI--------RATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 114 -SIDSKGADFKA----LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
++ GA F+ + E M+ SL+ + Q D + ++ + IA+ + A+E
Sbjct: 67 FTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALE 123
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+LH ++H D+KPSNVL++ + DFG+S +L D
Sbjct: 124 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+GS G V + +VAVK ++L+++ E +R+ +H N+ ++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D +V E++E G+L D + T + E Q + + V A+ LH
Sbjct: 142 V-----GDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 189
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVA 233
++H DIK ++LL +D + DFG +S E P + GT ++A
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-------KEVPRRKX-LVGTPYWMA 238
Query: 234 P 234
P
Sbjct: 239 P 239
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 27/186 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G+G+YG V K ++AVK I R+ V E R + +++ C
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI--------RATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 114 -SIDSKGADFKA----LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
++ GA F+ + E M+ SL+ + Q D + ++ + IA+ + A+E
Sbjct: 111 FTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALE 167
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
+LH ++H D+KPSNVL++ + DFG+S +L +D+ ++T + G
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDA-----GC 216
Query: 229 VGYVAP 234
Y+AP
Sbjct: 217 KPYMAP 222
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + + +G G+ G V+K +V+A K+I+L+ K A R+ + L+ + N
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 83
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
I+ + S G ++ E+M+ GSL+ L + E ++ +V+IA V
Sbjct: 84 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIA--VIKG 135
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
+ YL + ++H D+KPSN+L+++ + DFG+S
Sbjct: 136 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+GS G V + +VAVK ++L+++ E +R+ +H N+ ++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D +V E++E G+L D + T + E Q + + V A+ LH
Sbjct: 219 V-----GDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 266
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
++H DIK ++LL +D + DFG +S +
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 41/221 (18%)
Query: 27 LPMEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK 82
L M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 4 LEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----K 59
Query: 83 QKGAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLE 136
F+S + E L++++H N+ ++ + + S + ++ L
Sbjct: 60 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 119
Query: 137 DWLH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDND 193
+ + T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNED 166
Query: 194 MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 167 CELKILDFGL-----------ARHTDDEMTGYVATRWYRAP 196
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G+G+YG V K + AVK I R+ V E R + +++ C
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI--------RATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 114 -SIDSKGADFK---ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
++ GA F+ + + + SL+ + Q D + ++ + IA+ + A+E+
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEH 151
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
LH ++H D+KPSNVL++ DFG+S +L D
Sbjct: 152 LHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 37/176 (21%)
Query: 47 EFSQSNMIGQGSYG---SVYKGILGEDEMVVAVKVINLKQKGAF------RSFVAECEAL 97
E+ IG G+YG S + + G+ VA+K I AF + + E + L
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQ---VAIKKI----PNAFDVVTNAKRTLRELKIL 108
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKAL--VFEYMENGSLEDWLHQTN----DHLEVFKL 151
++ +H N+ I I G +FK++ V + ME+ L +H + +H+ F
Sbjct: 109 KHFKHDNIIAIKDILRPTVPYG-EFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLY 166
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
L++ ++Y+H + Q ++H D+KPSN+L++ + +GDFG+++ L
Sbjct: 167 QLLR----------GLKYMH-SAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 93/230 (40%), Gaps = 41/230 (17%)
Query: 18 GSVRKPIDTLPMEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMV 73
G V + L M ++ P EL+K E + + +G G+YGSV + +
Sbjct: 13 GLVPRGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLR 72
Query: 74 VAVKVINLKQKGAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVF 127
VAVK K F+S + E L++++H N+ ++ + + S +
Sbjct: 73 VAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 128
Query: 128 EYMENGSLEDWLH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIK 184
++ L + + T+DH++ +++ ++Y+H ++H D+K
Sbjct: 129 THLMGADLNNIVKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLK 175
Query: 185 PSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
PSN+ ++ D + DFGL A T G T Y AP
Sbjct: 176 PSNLAVNEDCELKILDFGL-----------ARHTDDEMTGYVATRWYRAP 214
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 41/221 (18%)
Query: 27 LPMEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK 82
L M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 5 LEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----K 60
Query: 83 QKGAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLE 136
F+S + E L++++H N+ ++ + + S + ++ L
Sbjct: 61 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 137 DWLH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDND 193
+ + T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNED 167
Query: 194 MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 168 CELKILDFGL-----------ARHTDDEMTGYVATRWYRAP 197
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LHQ---TNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKXQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDXE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 41/221 (18%)
Query: 27 LPMEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK 82
L M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 5 LEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----K 60
Query: 83 QKGAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLE 136
F+S + E L++++H N+ ++ + + S + ++ L
Sbjct: 61 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 137 DWLH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDND 193
+ + T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNED 167
Query: 194 MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 168 SELKILDFGL-----------ARHTDDEMTGYVATRWYRAP 197
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 37/176 (21%)
Query: 47 EFSQSNMIGQGSYG---SVYKGILGEDEMVVAVKVINLKQKGAF------RSFVAECEAL 97
E+ IG G+YG S + + G+ VA+K I AF + + E + L
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQ---VAIKKI----PNAFDVVTNAKRTLRELKIL 107
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKAL--VFEYMENGSLEDWLHQTN----DHLEVFKL 151
++ +H N+ I I G +FK++ V + ME+ L +H + +H+ F
Sbjct: 108 KHFKHDNIIAIKDILRPTVPYG-EFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLY 165
Query: 152 SLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
L++ ++Y+H + Q ++H D+KPSN+L++ + +GDFG+++ L
Sbjct: 166 QLLR----------GLKYMH-SAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
+G+G++ V + + + A K+IN K+ A F+ E R ++H N I+ +
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN---IVRL 69
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
SI + F LVF+ + G L + + + E IQ+ + +I Y H
Sbjct: 70 HDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------ILESIAYCH 121
Query: 172 HNCQPPMVHGDIKPSNVLLDND---MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
N +VH ++KP N+LL + + DFGL+ ++ + G GT
Sbjct: 122 SNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------EAWHGFAGT 169
Query: 229 VGYVAP 234
GY++P
Sbjct: 170 PGYLSP 175
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI--NLKQKGAFR-SFVAECEALRNIRHRN 104
+ ++G G V+ D VAVKV+ +L + +F F E + + H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
+ + + ++ +V EY++ +L D +H ++ + + + D
Sbjct: 74 IVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADAC 126
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIG 224
A+ + H N ++H D+KP+N+L+ V DFG+++ + +D ++ +T
Sbjct: 127 QALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAI-ADSGNSVXQT----AA 178
Query: 225 IKGTVGYVAP 234
+ GT Y++P
Sbjct: 179 VIGTAQYLSP 188
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI--NLKQKGAFR-SFVAECEALRNIRHRN 104
+ ++G G V+ D VAVKV+ +L + +F F E + + H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
+ + + ++ +V EY++ +L D +H ++ + + + D
Sbjct: 74 IVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADAC 126
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIG 224
A+ + H N ++H D+KP+N+++ V DFG+++ + +D ++ ++T
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQT----AA 178
Query: 225 IKGTVGYVAP 234
+ GT Y++P
Sbjct: 179 VIGTAQYLSP 188
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI--NLKQKGAFR-SFVAECEALRNIRHRN 104
+ ++G G V+ D VAVKV+ +L + +F F E + + H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
+ + + ++ +V EY++ +L D +H ++ + + + D
Sbjct: 74 IVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADAC 126
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIG 224
A+ + H N ++H D+KP+N+++ V DFG+++ + +D ++ ++T
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQT----AA 178
Query: 225 IKGTVGYVAP 234
+ GT Y++P
Sbjct: 179 VIGTAQYLSP 188
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 174
Query: 233 AP 234
AP
Sbjct: 175 AP 176
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
+G+G++ V + + + A K+IN K+ A F+ E R ++H N I+ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN---IVRL 70
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
SI + F LVF+ + G L + + + E IQ+ + +I Y H
Sbjct: 71 HDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------ILESIAYCH 122
Query: 172 HNCQPPMVHGDIKPSNVLLDND---MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
N +VH ++KP N+LL + + DFGL+ ++ + G GT
Sbjct: 123 SNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------EAWHGFAGT 170
Query: 229 VGYVAP 234
GY++P
Sbjct: 171 PGYLSP 176
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
+G+G++ V + + + A K+IN K+ A F+ E R ++H N I+ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN---IVRL 70
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
SI + F LVF+ + G L + + + E IQ+ + +I Y H
Sbjct: 71 HDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------ILESIAYCH 122
Query: 172 HNCQPPMVHGDIKPSNVLLDND---MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
N +VH ++KP N+LL + + DFGL+ ++ + G GT
Sbjct: 123 SNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS---------EAWHGFAGT 170
Query: 229 VGYVAP 234
GY++P
Sbjct: 171 PGYLSP 176
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 28/186 (15%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
+G+G++ V + + + A K+IN K+ A F+ E R ++H N I+ +
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN---IVRL 93
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
SI + F LVF+ + G L + + + E IQ+ + +I Y H
Sbjct: 94 HDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------ILESIAYCH 145
Query: 172 HNCQPPMVHGDIKPSNVLLDND---MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
N +VH ++KP N+LL + + DFGL+ ++ + G GT
Sbjct: 146 SNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---------AWHGFAGT 193
Query: 229 VGYVAP 234
GY++P
Sbjct: 194 PGYLSP 199
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LHQ---TNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKXQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEM----VV 74
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTV 60
Query: 75 AVKVINLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEY 129
AVK++ ++GA R+ ++E + L +I H N+ ++ C+ G +V E+
Sbjct: 61 AVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EF 113
Query: 130 MENGSLEDWLHQTNDHLEVFK------LSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDI 183
+ G+L +L + +K L+L + + VA +E+L +H D+
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 184 KPSNVLLDNDMVAHVGDFGLSKFLSSD 210
N+LL V + DFGL++ + D
Sbjct: 171 AARNILLSEKNVVKIXDFGLARDIYKD 197
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN---LKQKGAFRSFVAECEALRNIRHR 103
+F +IG+G++G V + E + A+K++N + ++ F E + L N +
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAID 162
+T + + + LV +Y G L L + D L E I + +AID
Sbjct: 135 WITAL-----HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID 189
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
+I LH+ VH DIKP NVLLD + + DFG ++ D T SS
Sbjct: 190 ---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG------TVQSS 234
Query: 223 IGIKGTVGYVAP 234
+ + GT Y++P
Sbjct: 235 VAV-GTPDYISP 245
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGXVATRWYRAP 191
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 29/195 (14%)
Query: 48 FSQSNMIGQGSYGSVY--KGILGEDE-----MVVAVKVINLKQKGAFRSFVAECEALRNI 100
F ++G G+YG V+ + I G D M V K +++ E + L +I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
R + ++K L+ +Y+ G L L Q E V I
Sbjct: 116 RQSPFLVTLHYAFQTETK----LHLILDYINGGELFTHLSQRERFTE-------HEVQIY 164
Query: 161 I-DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
+ ++ A+E+LH + +++ DIK N+LLD++ + DFGLSK +D + A +
Sbjct: 165 VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-- 219
Query: 220 SSSIGIKGTVGYVAP 234
GT+ Y+AP
Sbjct: 220 -----FCGTIEYMAP 229
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
+F ++G+G++G V IL ++ A+K++ + K V E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI- 159
RH LT + + D V EY G L + H + + ++ +R
Sbjct: 63 RHPFLTALKYAFQTHDRL-----CFVMEYANGGEL--FFHLSRE-----RVFTEERARFY 110
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA+EYLH +V+ DIK N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
+F ++G+G++G V IL ++ A+K++ + K V E L+N
Sbjct: 9 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI- 159
RH LT + + D V EY G L + H + + ++ +R
Sbjct: 66 RHPFLTALKYAFQTHDRL-----CFVMEYANGGEL--FFHLSRE-----RVFTEERARFY 113
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA+EYLH +V+ DIK N++LD D + DFGL K
Sbjct: 114 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
+F ++G+G++G V IL ++ A+K++ + K V E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI- 159
RH LT + + D V EY G L + H + + ++ +R
Sbjct: 63 RHPFLTALKYAFQTHDRL-----CFVMEYANGGEL--FFHLSRE-----RVFTEERARFY 110
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA+EYLH +V+ DIK N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G+G Y V++ I + V VK++ +K + E + L N+R IIT+
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLR--GGPNIITLAD 99
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ + ALVFE++ N + D+ F + ++ A++Y H
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM---------YEILKALDYCHSM 150
Query: 174 CQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
++H D+KP NV++D++ + D+GL++F
Sbjct: 151 G---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 67
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 68 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 127
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 128 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDXE 174
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 175 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 202
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN---LKQKGAFRSFVAECEALRNIRHR 103
+F +IG+G++G V + E + A+K++N + ++ F E + L N +
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL-EVFKLSLIQRVNIAID 162
+T + + + LV +Y G L L + D L E I + +AID
Sbjct: 151 WITAL-----HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID 205
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
+I LH+ VH DIKP NVLLD + + DFG ++ D T SS
Sbjct: 206 ---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG------TVQSS 250
Query: 223 IGIKGTVGYVAP 234
+ + GT Y++P
Sbjct: 251 VAV-GTPDYISP 261
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
+F ++G+G++G V IL ++ A+K++ + K V E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI- 159
RH LT + + D V EY G L + H + + ++ +R
Sbjct: 63 RHPFLTALKYAFQTHDRL-----CFVMEYANGGEL--FFHLSRE-----RVFTEERARFY 110
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA+EYLH +V+ DIK N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
+F ++G+G++G V IL ++ A+K++ + K V E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI- 159
RH LT + + D V EY G L + H + + ++ +R
Sbjct: 63 RHPFLTALKYAFQTHDRL-----CFVMEYANGGEL--FFHLSRE-----RVFTEERARFY 110
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA+EYLH +V+ DIK N++LD D + DFGL K
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 68
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 69 KPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 128
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 129 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 175
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 176 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
+F ++G+G++G V IL ++ A+K++ + K V E L+N
Sbjct: 6 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI- 159
RH LT + + D V EY G L + H + + ++ +R
Sbjct: 63 RHPFLTALKYAFQTHDRL-----CFVMEYANGGEL--FFHLSRE-----RVFTEERARFY 110
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
++ SA+EYLH +V+ DIK N++LD D + DFGL K SD
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-------- 159
Query: 220 SSSIGIKGTVGYVAP 234
++ GT Y+AP
Sbjct: 160 ATMKXFCGTPEYLAP 174
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 74 VAVKVI--NLKQKGAFR-SFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYM 130
VAVKV+ +L + +F F E + + H + + + ++ +V EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEA-ETPAGPLPYIVMEYV 98
Query: 131 ENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+ +L D +H ++ + + + D A+ + H N ++H D+KP+N+++
Sbjct: 99 DGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 191 DNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
V DFG+++ + +D ++ ++T + GT Y++P
Sbjct: 150 SATNAVKVMDFGIARAI-ADSGNSVTQT----AAVIGTAQYLSP 188
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 68
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 69 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 128
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 129 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 175
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 176 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 68
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 69 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 128
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 129 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 175
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 176 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 203
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 75
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 76 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 135
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 136 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 182
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 183 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 210
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
+F ++G+G++G V IL ++ A+K++ + K V E L+N
Sbjct: 11 DFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI- 159
RH LT + + D V EY G L + H + + ++ +R
Sbjct: 68 RHPFLTALKYAFQTHDRL-----CFVMEYANGGEL--FFHLSRE-----RVFTEERARFY 115
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
++ SA+EYLH +V+ DIK N++LD D + DFGL K SD
Sbjct: 116 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-------- 164
Query: 220 SSSIGIKGTVGYVAP 234
++ GT Y+AP
Sbjct: 165 ATMKXFCGTPEYLAP 179
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG+GS+G V + + + A+K +N + ++ R+ E + ++ + H L +
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFL---VN 79
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ S + F +V + + G L L Q N H + + L ++ A++YL
Sbjct: 80 LWYSFQDEEDMF--MVVDLLLGGDLRYHLQQ-NVHFKEETVKLF-----ICELVMALDYL 131
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVG 230
+ ++H D+KP N+LLD H+ DF ++ L ET +++ GT
Sbjct: 132 QNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAML-------PRETQITTMA--GTKP 179
Query: 231 YVAP 234
Y+AP
Sbjct: 180 YMAP 183
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 58
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 119 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDSE 165
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 166 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 193
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 67
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 68 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 127
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 128 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 174
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 175 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 202
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 76
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 77 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 137 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 183
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 184 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 211
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 35 MVSYAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN---LKQKGAFRSFV 91
+V E+ +F +IG+G++ V + + V A+K++N + ++G F
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 92 AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHL--EVF 149
E + L N R +T++ + ++ LV EY G L L + + + E+
Sbjct: 110 EERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 150 KLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+ L + V +AID + Y VH DIKP N+LLD + DFG L +
Sbjct: 165 RFYLAEIV-MAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214
Query: 210 DHLDTASETPSSSIGIKGTVGYVAP 234
D T S + + GT Y++P
Sbjct: 215 DG------TVRSLVAV-GTPDYLSP 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 58
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 119 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 165
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 166 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 193
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G++G VYK E + A KVI K + ++ E E L H + K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL---- 74
Query: 114 SIDSKGADFK----ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
GA + ++ E+ G+++ + + + L ++ ++ R + A+ +
Sbjct: 75 -----GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR-----QMLEALNF 124
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
LH ++H D+K NVL+ + + DFG+S
Sbjct: 125 LHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSVYKGI---LGEDEMVVAVKVINLKQKG--- 85
Q P E + +F ++ +G G++G V + LG+++ V+ V V LK
Sbjct: 19 QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 76
Query: 86 AFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN- 143
+ ++E + + ++ +H N+ ++ C+ G ++ EY G L ++L +
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAE 131
Query: 144 ----------------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPS 186
D + L L ++ + VA + +L NC +H D+
Sbjct: 132 AMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAAR 187
Query: 187 NVLLDNDMVAHVGDFGLSKFLSSD 210
NVLL N VA +GDFGL++ + +D
Sbjct: 188 NVLLTNGHVAKIGDFGLARDIMND 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G++G VYK E + A KVI K + ++ E E L H + K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL---- 82
Query: 114 SIDSKGADFK----ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEY 169
GA + ++ E+ G+++ + + + L ++ ++ R + A+ +
Sbjct: 83 -----GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR-----QMLEALNF 132
Query: 170 LHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLS 204
LH ++H D+K NVL+ + + DFG+S
Sbjct: 133 LHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 34/207 (16%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEM----VV 74
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTV 60
Query: 75 AVKVINLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEY 129
AVK++ ++GA R+ ++E + L +I H N+ ++ C+ G +V E+
Sbjct: 61 AVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EF 113
Query: 130 MENGSLEDWLHQTNDHLEVFK------LSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDI 183
+ G+L +L + +K L+L + + VA +E+L +H D+
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 184 KPSNVLLDNDMVAHVGDFGLSKFLSSD 210
N+LL V + DFGL++ + D
Sbjct: 171 AARNILLSEKNVVKICDFGLARDIYKD 197
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEM----VV 74
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 6 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTV 62
Query: 75 AVKVINLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEY 129
AVK++ ++GA R+ ++E + L +I H N+ ++ C+ G +V E+
Sbjct: 63 AVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EF 115
Query: 130 MENGSLEDWLHQTNDHLEVFK--------LSLIQRVNIAIDVASAIEYLHHNCQPPMVHG 181
+ G+L +L + +K L+L + + VA +E+L +H
Sbjct: 116 CKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHR 172
Query: 182 DIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
D+ N+LL V + DFGL++ + D
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKD 201
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 42 SKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA----ECEAL 97
+K ++ +++G+GSYG V + + E AVK++ K+ + A E + L
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
R +RH+N+ +++ + + + + +V EY G + + D + + + Q
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKM---YMVMEYCVCG-----MQEMLDSVPEKRFPVCQAH 112
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK----FLSSDHLD 213
+ +EYLH +VH DIKP N+LL + G+++ F + D
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 214 TASETPS 220
T+ +P+
Sbjct: 170 TSQGSPA 176
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 74 VAVKVI--NLKQKGAFR-SFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYM 130
VAVKV+ +L + +F F E + + H + + + ++ +V EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYV 98
Query: 131 ENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+ +L D +H ++ + + + D A+ + H N ++H D+KP+N+++
Sbjct: 99 DGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 191 DNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
V DFG+++ + +D ++ ++T + GT Y++P
Sbjct: 150 SATNAVKVMDFGIARAI-ADSGNSVTQT----AAVIGTAQYLSP 188
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 42/185 (22%)
Query: 40 ELSKATCEFSQS----NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF--RSFVAE 93
EL+K E Q +G G+YGSV VAVK ++ + R E
Sbjct: 18 ELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE 77
Query: 94 CEALRNIRHRN---LTKIITICSSIDS----------KGADFKALVFEYMENGSLEDWLH 140
L++++H N L + T +SI+ GAD +V ++ +L D
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KSQALSD--- 130
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
+H++ L++ ++Y+H ++H D+KPSNV ++ D + D
Sbjct: 131 ---EHVQFLVYQLLR----------GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILD 174
Query: 201 FGLSK 205
FGL++
Sbjct: 175 FGLAR 179
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI---NLKQKGAFRSFVAECEALRNIRHR 103
+F +G+G +G+VY + +VA+KV+ ++++G E E ++ H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
N+ ++ D + L+ EY G L L ++ E ++++ ++
Sbjct: 84 NILRLYNYF--YDRRRI---YLILEYAPRGELYKELQKSCTFDEQRTATIME------EL 132
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A A+ Y H ++H DIKP N+LL + DFG S S T
Sbjct: 133 ADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC------- 182
Query: 224 GIKGTVGYVAP 234
GT+ Y+ P
Sbjct: 183 ---GTLDYLPP 190
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+GS G V VAVK+++L+++ E +R+ +H N+ ++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
G + L+ E+++ G+L D + Q +L+ Q + V A+ YLH
Sbjct: 113 V----GEELWVLM-EFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLHAQ 160
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
++H DIK ++LL D + DFG +S D
Sbjct: 161 G---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 194
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + IG G+YGSV + + VAVK K
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 63
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 64 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 124 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDXELK 170
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 171 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 196
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNL 105
+S IG G V++ +L E + + A+K +NL++ S+ E L ++ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 68
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGS--LEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
KII + D + D ++ ME G+ L WL + + +R + ++
Sbjct: 69 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 117
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ +H Q +VH D+KP+N L+ + M+ + DFG++ + DT S S +
Sbjct: 118 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQV 170
Query: 224 GIKGTVGYVAP 234
GTV Y+ P
Sbjct: 171 ---GTVNYMPP 178
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 74 VAVKVI--NLKQKGAFR-SFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYM 130
VAVKV+ +L + +F F E + + H + + + ++ +V EY+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYV 115
Query: 131 ENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLL 190
+ +L D +H ++ + + + D A+ + H N ++H D+KP+N+++
Sbjct: 116 DGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 166
Query: 191 DNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
V DFG+++ + +D ++ ++T + + GT Y++P
Sbjct: 167 SATNAVKVMDFGIARAI-ADSGNSVTQTAA----VIGTAQYLSP 205
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNL 105
+S IG G V++ +L E + + A+K +NL++ S+ E L ++ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 67
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGS--LEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
KII + D + D ++ ME G+ L WL + + +R + ++
Sbjct: 68 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 116
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ +H Q +VH D+KP+N L+ + M+ + DFG++ + DT S S +
Sbjct: 117 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQV 169
Query: 224 GIKGTVGYVAP 234
GTV Y+ P
Sbjct: 170 ---GTVNYMPP 177
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG+G+YGSV K + ++AVK I RS V E E + + ++ + C
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI--------RSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV-------NIAIDVASA 166
I F +F + + + + D + S++ V I + A
Sbjct: 82 YI----VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
+ +L N + ++H DIKPSN+LLD + DFG+S L +D+ ++T +
Sbjct: 138 LNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQL----VDSIAKTRDA----- 186
Query: 227 GTVGYVAP 234
G Y+AP
Sbjct: 187 GCRPYMAP 194
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
+ S +E+LH Q +++ D+KP NVLLD+D + D GL+ L + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 223 IGIKGTVGYVAP 234
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRNIRHRNLTKIITI 111
+G+G++ V + + A K+IN K+ A + E R ++H N I+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN---IVRL 86
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
SI +G + L+F+ + G L + + + E IQ++ +E +
Sbjct: 87 HDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQI---------LEAVL 135
Query: 172 HNCQPPMVHGDIKPSNVLLDNDM---VAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
H Q +VH D+KP N+LL + + + DFGL+ + + + G GT
Sbjct: 136 HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ--------QAWFGFAGT 187
Query: 229 VGYVAP 234
GY++P
Sbjct: 188 PGYLSP 193
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNL 105
+S IG G V++ +L E + + A+K +NL++ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 87
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGS--LEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
KII + D + D ++ ME G+ L WL + + +R + ++
Sbjct: 88 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 136
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ +H Q +VH D+KP+N L+ + M+ + DFG++ + DT S S +
Sbjct: 137 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQV 189
Query: 224 GIKGTVGYVAP 234
GTV Y+ P
Sbjct: 190 ---GTVNYMPP 197
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
+ S +E+LH Q +++ D+KP NVLLD+D + D GL+ L + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 223 IGIKGTVGYVAP 234
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
+ S +E+LH Q +++ D+KP NVLLD+D + D GL+ L + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 223 IGIKGTVGYVAP 234
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
+ S +E+LH Q +++ D+KP NVLLD+D + D GL+ L + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 223 IGIKGTVGYVAP 234
G GT G++AP
Sbjct: 348 -GYAGTPGFMAP 358
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNL 105
+S IG G V++ +L E + + A+K +NL++ S+ E L ++ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 71
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGS--LEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
KII + D + D ++ ME G+ L WL + + +R + ++
Sbjct: 72 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 120
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ +H Q +VH D+KP+N L+ + M+ + DFG++ + DT S S +
Sbjct: 121 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQV 173
Query: 224 GIKGTVGYVAP 234
GTV Y+ P
Sbjct: 174 ---GTVNYMPP 181
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEMVVAVKV 78
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 5 DELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTV 61
Query: 79 -INLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMEN 132
+ + ++GA R+ ++E + L +I H N+ ++ C+ G +V E+ +
Sbjct: 62 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKF 117
Query: 133 GSLEDWLHQTNDHLEVFK---------LSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
G+L +L + +K L+L + + VA +E+L C +H D
Sbjct: 118 GNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHRD 173
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+ N+LL V + DFGL++ + D
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKD 201
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N+ ++ C+ G + ++ EY G
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D +T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI--NNIDXXKKTTNGRLPVK----WMAP 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N+ ++ C+ G + ++ EY G
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D +T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI--NNIDXXKKTTNGRLPVK----WMAP 228
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEMVVAVKV 78
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 79 -INLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMEN 132
+ + ++GA R+ ++E + L +I H N+ ++ C+ G +V E+ +
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKF 116
Query: 133 GSLEDWLHQTNDHLEVFK----------LSLIQRVNIAIDVASAIEYL-HHNCQPPMVHG 181
G+L +L + +K L+L + + VA +E+L C +H
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 172
Query: 182 DIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
D+ N+LL V + DFGL++ + D
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKD 201
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMAGFVATRWYRAP 191
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ D+GL A T G T Y AP
Sbjct: 164 LKILDYGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNL 105
+S IG G V++ +L E + + A+K +NL++ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGS--LEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
KII + D + D ++ ME G+ L WL + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 164
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ +H Q +VH D+KP+N L+ + M+ + DFG++ + DT S S +
Sbjct: 165 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQV 217
Query: 224 GIKGTVGYVAP 234
GTV Y+ P
Sbjct: 218 ---GTVNYMPP 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMAGFVATRWYRAP 191
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 63
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 64 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 124 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDXELK 170
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 171 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 196
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 233 AP 234
AP
Sbjct: 175 AP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 233 AP 234
AP
Sbjct: 175 AP 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 233 AP 234
AP
Sbjct: 175 AP 176
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 233 AP 234
AP
Sbjct: 175 AP 176
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 233 AP 234
AP
Sbjct: 175 AP 176
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNL 105
+S IG G V++ +L E + + A+K +NL++ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGS--LEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
KII + D + D ++ ME G+ L WL + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 164
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ +H Q +VH D+KP+N L+ + M+ + DFG++ + DT S S +
Sbjct: 165 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQV 217
Query: 224 GIKGTVGYVAP 234
GTV Y+ P
Sbjct: 218 ---GTVNYMPP 225
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 70
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 71 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 121
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 172
Query: 233 AP 234
AP
Sbjct: 173 AP 174
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A +V A+EYLH +++ D+KP N+LLD + + DFG +K++ P
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV-----------P 157
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 158 DVTYXLCGTPDYIAP 172
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 40/212 (18%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEM----VV 74
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 41 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 97
Query: 75 AVKVINLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEY 129
AVK++ ++GA R+ ++E + L +I H N+ ++ C+ G +V E+
Sbjct: 98 AVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EF 150
Query: 130 MENGSLEDWLHQTNDHLEVFK----------LSLIQRVNIAIDVASAIEYL-HHNCQPPM 178
+ G+L +L + +K L+L + + VA +E+L C
Sbjct: 151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---- 206
Query: 179 VHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+H D+ N+LL V + DFGL++ + D
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 233 AP 234
AP
Sbjct: 175 AP 176
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G G++G V++ + V K IN + E + + H K+I +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH---PKLINLHD 115
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ + K L+ E++ G L D + E +K+S + +N ++++H +
Sbjct: 116 AFEDKYE--MVLILEFLSGGELFDRIAA-----EDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 174 CQPPMVHGDIKPSNVLLDNDMVAHVG--DFGLSKFLSSDHL 212
+VH DIKP N++ + + V DFGL+ L+ D +
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 164 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEMVVAVKV 78
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 79 -INLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMEN 132
+ + ++GA R+ ++E + L +I H N+ ++ C+ G +V E+ +
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKF 116
Query: 133 GSLEDWLHQTNDHLEVFK----------LSLIQRVNIAIDVASAIEYL-HHNCQPPMVHG 181
G+L +L + +K L+L + + VA +E+L C +H
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 172
Query: 182 DIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
D+ N+LL V + DFGL++ + D
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKD 201
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 65
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 126 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 172
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 173 ILDFGL-----------ARHTADEMTGYVATRWYRAP 198
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N IIT+ + G + ++ EY G
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKN---IITLLGACTQDGPLY--VIVEYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D +T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVK----WMAP 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + VAVK K
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLS 76
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 77 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 137 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 183
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 184 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 211
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 65
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 126 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 172
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 173 ILDFGL-----------ARHTADEMTGYVATRWYRAP 198
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + VAVK K
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLS 75
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 76 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 135
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 136 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 182
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 183 LKILDFGL-----------ARHTDDEMTGYVATRWYRAP 210
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEMVVAVKV 78
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 79 -INLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMEN 132
+ + ++GA R+ ++E + L +I H N+ ++ C+ G +V E+ +
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKF 116
Query: 133 GSLEDWLHQTNDHLEVFK----------LSLIQRVNIAIDVASAIEYL-HHNCQPPMVHG 181
G+L +L + +K L+L + + VA +E+L C +H
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 172
Query: 182 DIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
D+ N+LL V + DFGL++ + D
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKD 201
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 49 SQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKI 108
S++ ++G G +G V+K + +A K+I + E + + H NL
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL--- 148
Query: 109 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
I + + +SK LV EY++ G L D + E + L+ + + + I
Sbjct: 149 IQLYDAFESKND--IVLVMEYVDGGELFDRIID-----ESYNLTELDTILFMKQICEGIR 201
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVG--DFGLSK 205
++H Q ++H D+KP N+L N + DFGL++
Sbjct: 202 HMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 41/214 (19%)
Query: 34 PMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS 89
P EL+K E + + +G G+YGSV + + VAVK K F+S
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQS 57
Query: 90 FV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH--- 140
+ E L++++H N+ ++ + + S + ++ L + +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 117
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D + D
Sbjct: 118 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 164
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
FGL A T G T Y AP
Sbjct: 165 FGL-----------ARHTDDEMTGYVATRWYRAP 187
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 65
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 126 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 172
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 173 ILDFGL-----------ARHTADEMTGYVATRWYRAP 198
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 25 DTLPMEKQFPMVSYAELSKATCEFSQSNM-----IGQGSYGSVYKG-ILGEDEMVVAVKV 78
D LP+++ + Y + EF + + +G+G++G V + G D+ V
Sbjct: 6 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 62
Query: 79 -INLKQKGA----FRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMEN 132
+ + ++GA R+ ++E + L +I H N+ ++ C+ G +V E+ +
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKF 118
Query: 133 GSLEDWLHQTNDHLEVFK----------LSLIQRVNIAIDVASAIEYL-HHNCQPPMVHG 181
G+L +L + +K L+L + + VA +E+L C +H
Sbjct: 119 GNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC----IHR 174
Query: 182 DIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
D+ N+LL V + DFGL++ + D
Sbjct: 175 DLAARNILLSEKNVVKICDFGLARDIYKD 203
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 41/214 (19%)
Query: 34 PMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS 89
P EL+K E + + +G G+YGSV + + VAVK K F+S
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQS 58
Query: 90 FV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH--- 140
+ E L++++H N+ ++ + + S + ++ L + +
Sbjct: 59 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 118
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D + D
Sbjct: 119 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 165
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
FGL A T G T Y AP
Sbjct: 166 FGL-----------ARHTDDEMTGYVATRWYRAP 188
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 41/214 (19%)
Query: 34 PMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS 89
P EL+K E + + +G G+YGSV + + VAVK K F+S
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQS 58
Query: 90 FV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH--- 140
+ E L++++H N+ ++ + + S + ++ L + +
Sbjct: 59 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 118
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D + D
Sbjct: 119 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 165
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
FGL A T G T Y AP
Sbjct: 166 FGL-----------ARHTDDEMTGYVATRWYRAP 188
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 41/214 (19%)
Query: 34 PMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS 89
P EL+K E + + +G G+YGSV + + VAVK K F+S
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQS 59
Query: 90 FV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH--- 140
+ E L++++H N+ ++ + + S + ++ L + +
Sbjct: 60 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 119
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D + D
Sbjct: 120 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 166
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
FGL A T G T Y AP
Sbjct: 167 FGL-----------ARHTDDEMTGYVATRWYRAP 189
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 63
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 64 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 123
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 124 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 170
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 171 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 196
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 64
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 65 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 125 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 171
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 172 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 197
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + VAVK K
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLS 76
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 77 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 137 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 183
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 184 LKILDFGL-----------ARHTDDEMXGXVATRWYRAP 211
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 2 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 57
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 58 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 117
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 118 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 164
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 165 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 190
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N+ ++ C+ G + ++ EY G
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D +T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMRIADFGLARDI--NNIDYYKKTTNGRLPVK----WMAP 228
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 42/185 (22%)
Query: 40 ELSKATCEFSQS----NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF--RSFVAE 93
EL+K E Q +G G+YGSV VAVK ++ + R E
Sbjct: 10 ELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE 69
Query: 94 CEALRNIRHRN---LTKIITICSSIDS----------KGADFKALVFEYMENGSLEDWLH 140
L++++H N L + T +SI+ GAD +V + +L D
Sbjct: 70 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSD--- 122
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
+H++ L++ ++Y+H ++H D+KPSNV ++ D + D
Sbjct: 123 ---EHVQFLVYQLLR----------GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILD 166
Query: 201 FGLSK 205
FGL++
Sbjct: 167 FGLAR 171
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 65
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 125
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 126 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 172
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 173 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 198
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVIN---LKQKGAFRSFVAECEALRNI 100
EF ++G+G++G V IL +++ A+K++ + K + E L+N
Sbjct: 10 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
RH LT + + D V EY G L + H + + + S +
Sbjct: 67 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 115
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA++YLH + +V+ D+K N++LD D + DFGL K
Sbjct: 116 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 28/190 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
F + +G+G+ VY+ + A+KV LK+ + E L + H N+ K
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKV--LKKTVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ I + +LV E + G L D + + + E ++++ A+
Sbjct: 113 LKEIFETPTEI-----SLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEAV 161
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTASETPSSSIG 224
YLH N +VH D+KP N+L D + DFGLSK + L
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--------- 209
Query: 225 IKGTVGYVAP 234
+ GT GY AP
Sbjct: 210 VCGTPGYCAP 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 5 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 60
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 61 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 121 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 167
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 168 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 193
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 58
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 119 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 165
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 166 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 26 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 81
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 82 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 141
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 142 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 188
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 189 ILDFGL-----------ARHTDDEMXGYVATRWYRAP 214
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVIN---LKQKGAFRSFVAECEALRNI 100
EF ++G+G++G V IL +++ A+K++ + K + E L+N
Sbjct: 9 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
RH LT + + D V EY G L + H + + + S +
Sbjct: 66 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 114
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA++YLH + +V+ D+K N++LD D + DFGL K
Sbjct: 115 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVIN---LKQKGAFRSFVAECEALRNI 100
EF ++G+G++G V IL +++ A+K++ + K + E L+N
Sbjct: 11 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
RH LT + + D V EY G L + H + + + S +
Sbjct: 68 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 116
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA++YLH + +V+ D+K N++LD D + DFGL K
Sbjct: 117 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 48 FSQSNMIGQGSYGSVY--KGILGEDE-MVVAVKVINLKQKGAFRSF--VAECEALRNIRH 102
F ++G+G YG V+ + + G + + A+KV LK+ R+ A +A RNI
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKV--LKKAMIVRNAKDTAHTKAERNILE 76
Query: 103 R-NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---VFKLSLIQRVN 158
I+ + + + G + L+ EY+ G L L + +E F L+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLY--LILEYLSGGELFMQLEREGIFMEDTACFYLA------ 128
Query: 159 IAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASET 218
+++ A+ +LH Q +++ D+KP N++L++ + DFGL K S H T + T
Sbjct: 129 ---EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHT 180
Query: 219 PSSSIGIKGTVGYVAP 234
GT+ Y+AP
Sbjct: 181 ------FCGTIEYMAP 190
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 86/226 (38%), Gaps = 61/226 (26%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSF--------VAECEALRNIRHRNL 105
IGQGSYG V I + + A+K++N K R E ++ + H N+
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMN---KNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLH------------------------- 140
++ + + + LV E G L D L+
Sbjct: 91 ARLYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 141 ---QTNDHLEVFKLSL--IQR----VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD 191
N + F+ SL +QR NI + SA+ YLH+ + H DIKP N L
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFS 202
Query: 192 NDMVAHVG--DFGLSK-FLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ + DFGLSK F ++ + T + GT +VAP
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA-----GTPYFVAP 243
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 42/185 (22%)
Query: 40 ELSKATCEFSQS----NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF--RSFVAE 93
EL+K E Q +G G+YGSV VAVK ++ + R E
Sbjct: 18 ELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE 77
Query: 94 CEALRNIRHRN---LTKIITICSSIDS----------KGADFKALVFEYMENGSLEDWLH 140
L++++H N L + T +SI+ GAD +V + +L D
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSD--- 130
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
+H++ L++ ++Y+H ++H D+KPSNV ++ D + D
Sbjct: 131 ---EHVQFLVYQLLR----------GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILD 174
Query: 201 FGLSK 205
FGL++
Sbjct: 175 FGLAR 179
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 18/114 (15%)
Query: 125 LVFEYMENGSL---EDWLHQTNDHLEVFKLSLIQRVNIAID-VASAIEYLHHNCQPPMVH 180
+++EYMEN S+ +++ + + F IQ + I V ++ Y+H+ + + H
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCF--IPIQVIKCIIKSVLNSFSYIHN--EKNICH 175
Query: 181 GDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
D+KPSN+L+D + + DFG S+++ + G +GT ++ P
Sbjct: 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK----------GSRGTYEFMPP 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRP 58
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 141 Q---TNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 119 SQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDSELK 165
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL + T G T Y AP
Sbjct: 166 ILDFGLCR-----------HTDDEMTGYVATRWYRAP 191
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
EF ++G+G++G V IL +++ A+K++ + K + E L+N
Sbjct: 149 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
RH LT + + D V EY G L + H + + + S +
Sbjct: 206 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 254
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA++YLH + +V+ D+K N++LD D + DFGL K
Sbjct: 255 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 26/195 (13%)
Query: 29 MEKQFPMVSYAELSKATCE-FSQSNMIGQGSYGSV---YKGILGEDEMVVAVKVINL--- 81
M+ QF V A+ + + + Q IG G+ G V + +LG + VAVK ++
Sbjct: 4 MDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLG---INVAVKKLSRPFQ 60
Query: 82 KQKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFK--ALVFEYMENGSLEDWL 139
Q A R++ E L+ + H+N+ ++ + + +F+ LV E M + +L +
Sbjct: 61 NQTHAKRAY-RELVLLKCVNHKNIISLLNVFTP-QKTLEEFQDVYLVMELM-DANLCQVI 117
Query: 140 HQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVG 199
H DH E L Q + I++LH ++H D+KPSN+++ +D +
Sbjct: 118 HMELDH-ERMSYLLYQML-------CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKIL 166
Query: 200 DFGLSKFLSSDHLDT 214
DFGL++ S++ + T
Sbjct: 167 DFGLARTASTNFMMT 181
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N+ ++ C+ G + ++ EY G
Sbjct: 72 VKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D +T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVK----WMAP 228
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMV---VAVKVINLK---QKGAFRSFVAECEALRNI 100
EF ++G+G++G V IL +++ A+K++ + K + E L+N
Sbjct: 152 EFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
RH LT + + D V EY G L + H + + + S +
Sbjct: 209 RHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDRARFYG 257
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ SA++YLH + +V+ D+K N++LD D + DFGL K
Sbjct: 258 AEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 25/186 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINL-KQKGAFRSFVAECEALRNIRHRNLTKIITIC 112
+G G++G V+ + +K IN + + AE E L+++ H N+ KI +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ +V E E G L + + + + + + +A+ Y H
Sbjct: 90 EDYHNM-----YIVMETCEGGELLERIVSAQARGKALSEGYV--AELMKQMMNALAYFHS 142
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAH----VGDFGLSKFLSSDHLDTASETPSSSIGIKGT 228
+VH D+KP N+L D H + DFGL++ SD S GT
Sbjct: 143 QH---VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD---------EHSTNAAGT 189
Query: 229 VGYVAP 234
Y+AP
Sbjct: 190 ALYMAP 195
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N+ ++ C+ G + ++ EY G
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQ---DGPLY--VIVEYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D +T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVK----WMAP 228
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 39/198 (19%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+ + +G+G + Y+ + + V A KV V + L+ + ++
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV------------VPKSMLLKPHQKEKMS 74
Query: 107 KIITICSSIDS----------KGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
I I S+D+ + DF +V E SL + LH+ + + R
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMR 133
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
I ++YLH+N ++H D+K N+ L++DM +GDFGL+ + D
Sbjct: 134 QTI-----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----- 180
Query: 217 ETPSSSIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 181 ---ERKKDLCGTPNYIAP 195
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 39/198 (19%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+ + +G+G + Y+ + + V A KV V + L+ + ++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV------------VPKSMLLKPHQKEKMS 90
Query: 107 KIITICSSIDS----------KGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
I I S+D+ + DF +V E SL + LH+ + + R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMR 149
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
I ++YLH+N ++H D+K N+ L++DM +GDFGL+ + D +
Sbjct: 150 QTI-----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT 201
Query: 217 ETPSSSIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 202 --------LCGTPNYIAP 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 36/196 (18%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS-----FVAECEALRNIRH 102
+ + +G G+YG V +L D++ + I + +K + + + E L+ + H
Sbjct: 39 YQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
N+ K+ D + LV E + G L D + + K + + I
Sbjct: 96 PNIMKLYDFFE--DKRNY---YLVMECYKGGELFDEI------IHRMKFNEVDAAVIIKQ 144
Query: 163 VASAIEYLH-HNCQPPMVHGDIKPSNVLLDN---DMVAHVGDFGLSKFLSSDHLDTASET 218
V S + YLH HN +VH D+KP N+LL++ D + + DFGLS E
Sbjct: 145 VLSGVTYLHKHN----IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---------EN 191
Query: 219 PSSSIGIKGTVGYVAP 234
GT Y+AP
Sbjct: 192 QKKMKERLGTAYYIAP 207
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N+ ++ C+ G + ++ EY G
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI--NNIDYYKNTTNGRLPVK----WMAP 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 94/201 (46%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE------MVVAVKVI-NLKQKGAFRSFVAECEALRNI-RHRN 104
+G+G +G V +G D+ + VAVK++ + + V+E E ++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L + + +++
Sbjct: 149 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ +A +EYL C +H D+ NVL+ + V + DFGL++ + +++D
Sbjct: 204 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNID 257
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 258 YYKKTTNGRLPVK----WMAP 274
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 43/233 (18%)
Query: 15 RRRGSVRKPIDTLPMEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGED 70
++ GS P K+ P EL+K E + + +G G+YGSV +
Sbjct: 18 KKAGSAAAPFTM--SHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKS 75
Query: 71 EMVVAVKVINLKQKGAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKA 124
+ +AVK K F+S + E L++++H N+ ++ + + S
Sbjct: 76 GLKIAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDV 131
Query: 125 LVFEYMENGSLEDWLH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHG 181
+ ++ L + + T+DH++ +++ ++Y+H ++H
Sbjct: 132 YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHR 178
Query: 182 DIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
D+KPSN+ ++ D + DFGL A T G T Y AP
Sbjct: 179 DLKPSNLAVNEDCELKILDFGL-----------ARHTDDEMTGYVATRWYRAP 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG GSY + I M AVK+I+ + R E E L +R+ IIT+
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEIL--LRYGQHPNIITLKD 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D + +V E M+ G L D + L S + + + +EYLH
Sbjct: 84 VYDD--GKYVYVVTELMKGGELLDKI------LRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 174 CQPPMVHGDIKPSNVLL----DNDMVAHVGDFGLSKFLSSDH 211
+VH D+KPSN+L N + DFG +K L +++
Sbjct: 136 G---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 40 ELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVI------NLKQKGAFRS 89
E++K E + +G G+YG+V + G VA+K + L K A+R
Sbjct: 15 EVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR- 73
Query: 90 FVAECEALRNIRHRNLTKIITICSSIDSKGADFK--ALVFEYM--ENGSLEDWLHQTNDH 145
E L+++RH N+ ++ + + D DF LV +M + G L D
Sbjct: 74 ---ELRLLKHMRHENVIGLLDVFTP-DETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR 129
Query: 146 LEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++ +++ + Y+H ++H D+KP N+ ++ D + DFGL++
Sbjct: 130 IQFLVYQMLK----------GLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176
Query: 206 FLSSD 210
S+
Sbjct: 177 QADSE 181
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 39/198 (19%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+ + +G+G + Y+ + + V A KV V + L+ + ++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV------------VPKSMLLKPHQKEKMS 90
Query: 107 KIITICSSIDS----------KGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
I I S+D+ + DF +V E SL + LH+ + + R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMR 149
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
I ++YLH+N ++H D+K N+ L++DM +GDFGL+ + D
Sbjct: 150 QTI-----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----- 196
Query: 217 ETPSSSIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 197 ---ERKKXLCGTPNYIAP 211
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 39/198 (19%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+ + +G+G + Y+ + + V A KV V + L+ + ++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV------------VPKSMLLKPHQKEKMS 90
Query: 107 KIITICSSIDS----------KGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQR 156
I I S+D+ + DF +V E SL + LH+ + + R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMR 149
Query: 157 VNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTAS 216
I ++YLH+N ++H D+K N+ L++DM +GDFGL+ + D
Sbjct: 150 QTI-----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----- 196
Query: 217 ETPSSSIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 197 ---ERKKDLCGTPNYIAP 211
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 52 NMIGQGSYGSVYKGILGEDEMVVAVKVI--NLKQKGAFRSFVAECEALRNIRHRNLTKII 109
++IG GSYG V + ++ VVA+K I + + + E L + H ++ K++
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 110 TICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFK----LSLIQRVNIAIDVAS 165
I D + D +V E ++ D ++F+ L+ + + ++
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADS-----------DFKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++Y+H ++H D+KP+N L++ D V DFGL++
Sbjct: 168 GVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 15/158 (9%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTK 107
F + + +G GSYG V+K ED + AVK + FR L +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK----RSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSL--IQRVNIAIDVAS 165
C ++ + L + G H E + SL Q D
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGP------SLQQHCEAWGASLPEAQVWGYLRDTLL 168
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGL 203
A+ +LH +VH D+KP+N+ L +GDFGL
Sbjct: 169 ALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNL 105
+S IG G V++ +L E + + A+K +NL++ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 87
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGS--LEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
KII + D + D ++ ME G+ L WL + + +R + ++
Sbjct: 88 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 136
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ +H Q +VH D+KP+N L+ + M+ + DFG++ + D ++
Sbjct: 137 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQV--- 189
Query: 224 GIKGTVGYVAP 234
GTV Y+ P
Sbjct: 190 ---GTVNYMPP 197
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ FGL A T G T Y AP
Sbjct: 164 LKILGFGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+YG V + E VAVK++++K+ + E + H N+ K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG-- 72
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 233 AP 234
AP
Sbjct: 175 AP 176
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 41/214 (19%)
Query: 34 PMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS 89
P EL+K E + + +G G+YGSV + VAVK K F+S
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQS 57
Query: 90 FV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH--- 140
+ E L++++H N+ ++ + + S + ++ L + +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK 117
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D + D
Sbjct: 118 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 164
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
FGL A T G T Y AP
Sbjct: 165 FGL-----------ARHTDDEMTGYVATRWYRAP 187
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKG--------AFRSFVAECEALRNIRHRNL 105
IG G +G +Y A V+ ++ + F VA+ + ++ R
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
+ I S +FK + +M L L + + FK S + + + I +
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTV--LQLGIRMLD 162
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLL--DNDMVAHVGDFGLS-KFLSSDHLDTASETPSSS 222
+EY+H N VHGDIK +N+LL N ++ D+GLS ++ + + E P
Sbjct: 163 VLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRK- 218
Query: 223 IGIKGTVGYVA 233
G GT+ + +
Sbjct: 219 -GHNGTIEFTS 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 41/214 (19%)
Query: 34 PMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS 89
P EL+K E + + +G G+YGSV + VAVK K F+S
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQS 57
Query: 90 FV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH--- 140
+ E L++++H N+ ++ + + S + ++ L + +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 117
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D + D
Sbjct: 118 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 164
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
FGL A T G T Y AP
Sbjct: 165 FGL-----------ARHTDDEMAGFVATRWYRAP 187
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 94/201 (46%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE------MVVAVKVI-NLKQKGAFRSFVAECEALRNI-RHRN 104
+G+G +G V +G D+ + VAVK++ + + V+E E ++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L + + +++
Sbjct: 90 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ +A +EYL C +H D+ NVL+ + V + DFGL++ + +++D
Sbjct: 145 DLVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDI--NNID 198
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 199 YYKKTTNGRLPVK----WMAP 215
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 94/201 (46%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE------MVVAVKVI-NLKQKGAFRSFVAECEALRNI-RHRN 104
+G+G +G V +G D+ + VAVK++ + + V+E E ++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L + + +++
Sbjct: 92 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ +A +EYL C +H D+ NVL+ + V + DFGL++ + +++D
Sbjct: 147 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNID 200
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 201 YYKKTTNGRLPVK----WMAP 217
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 94/201 (46%), Gaps = 35/201 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDE------MVVAVKVI-NLKQKGAFRSFVAECEALRNI-RHRN 104
+G+G +G V +G D+ + VAVK++ + + V+E E ++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 105 LTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTN----------DHLEVFKLSLI 154
+ ++ C+ G + ++ EY G+L ++L + + +++
Sbjct: 95 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 155 QRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLD 213
V+ +A +EYL C +H D+ NVL+ + V + DFGL++ + +++D
Sbjct: 150 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNID 203
Query: 214 TASETPSSSIGIKGTVGYVAP 234
+T + + +K ++AP
Sbjct: 204 YYKKTTNGRLPVK----WMAP 220
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNL 105
+S IG G V++ +L E + + A+K +NL++ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 106 TKIITICSSIDSKGADFKALVFEYMENGS--LEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
KII + D + D ++ ME G+ L WL + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 164
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
A+ +H Q +VH D+KP+N L+ + M+ + DFG++ + DT S S +
Sbjct: 165 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQP---DTTSVVKDSQV 217
Query: 224 GIKGTVGYVAP 234
G V Y+ P
Sbjct: 218 ---GAVNYMPP 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 87/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + + +G G+YGSV + VAVK K
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRP 64
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 65 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 124
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 125 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 171
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 172 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 197
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 42 SKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA--FRSFVAECEALRN 99
++ T E+ +G+G++ V + + A +IN K+ A + E R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 100 IRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
++H N I+ + SI +G + L+F+ + G L + + + E IQ++
Sbjct: 67 LKHPN---IVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQI-- 119
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDM---VAHVGDFGLSKFLSSDHLDTAS 216
+E + H Q +VH ++KP N+LL + + + DFGL+ + +
Sbjct: 120 -------LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ----- 167
Query: 217 ETPSSSIGIKGTVGYVAP 234
+ G GT GY++P
Sbjct: 168 ---QAWFGFAGTPGYLSP 182
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 30/194 (15%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRN------I 100
+F M+G+GS+G V+ + A+K LK+ EC +
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
H LT + C+ + F V EY+ G L H + H K L + A
Sbjct: 77 EHPFLTHMF--CTFQTKENLFF---VMEYLNGGDL--MYHIQSCH----KFDLSRATFYA 125
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPS 220
++ +++LH +V+ D+K N+LLD D + DFG+ K + L A
Sbjct: 126 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEF 179
Query: 221 SSIGIKGTVGYVAP 234
GT Y+AP
Sbjct: 180 C-----GTPDYIAP 188
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 41/214 (19%)
Query: 34 PMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRS 89
P EL+K E + + +G G+YGSV + VAVK K F+S
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQS 57
Query: 90 FV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH--- 140
+ E L++++H N+ ++ + + S + ++ L + +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 117
Query: 141 QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGD 200
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D + D
Sbjct: 118 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 164
Query: 201 FGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
FGL A T G T Y AP
Sbjct: 165 FGL-----------ARHTDDEMTGYVATRWYRAP 187
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ D GL A T G T Y AP
Sbjct: 164 LKILDAGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ D GL A T G T Y AP
Sbjct: 164 LKILDRGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 53 MIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF--RSFVAECEALRNIRHRNLTKIIT 110
+IG+GSYG VY E VA+K +N + + + E L ++ + ++
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 111 ICSSIDSKGADFKALVFEYMENGS---LEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ D D +V E ++ + + T +H++ +L+ N
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN--------- 143
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
++H + ++H D+KP+N LL+ D V DFGL++ ++S+
Sbjct: 144 -FIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 31 KQFPMVSYAELSKATCEFSQ--SNM--IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGA 86
++ P EL+K E + N+ +G G+YGSV + VAVK K
Sbjct: 13 QERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRP 68
Query: 87 FRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLH 140
F+S + E L++++H N+ ++ + + S + ++ L + +
Sbjct: 69 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 128
Query: 141 ---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH 197
T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 129 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 175
Query: 198 VGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DFGL A T G T Y AP
Sbjct: 176 ILDFGL-----------ARHTDDEMTGYVATRWYRAP 201
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 29/193 (15%)
Query: 48 FSQSNMIGQGSYGSVY---KGILGEDEMVVAVKVIN---LKQKGAFRSFVAECEALRNIR 101
F ++GQGS+G V+ K + + A+KV+ LK + R+ + E + L ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILADVN 88
Query: 102 HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
H ++ + + ++G + L+ +++ G L L + EV + +A
Sbjct: 89 H---PFVVKLHYAFQTEGKLY--LILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLA- 137
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
++A +++LH +++ D+KP N+LLD + + DFGLSK A +
Sbjct: 138 ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--------EAIDHEKK 186
Query: 222 SIGIKGTVGYVAP 234
+ GTV Y+AP
Sbjct: 187 AYSFCGTVEYMAP 199
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ D GL A T G T Y AP
Sbjct: 164 LKILDGGL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG GSY + + M AVKVI+ + R E E L +R+ IIT+
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSK----RDPSEEIEIL--LRYGQHPNIITLKD 88
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D + LV E M G L D + L S + + + +EYLH
Sbjct: 89 VYDDGKHVY--LVTELMRGGELLDKI------LRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 174 CQPPMVHGDIKPSNVLL----DNDMVAHVGDFGLSKFLSSDH 211
+VH D+KPSN+L N + DFG +K L +++
Sbjct: 141 G---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDEM----VVAVKVINLKQKGA----FRSFVAECEALRNI-RHR 103
+G+G++G V + G D+ VAVK++ ++GA R+ ++E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 82
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFK----------LSL 153
N+ ++ C+ G +V E+ + G+L +L + +K L+L
Sbjct: 83 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 154 IQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+ + VA +E+L C +H D+ N+LL V + DFGL++ + D
Sbjct: 139 EHLICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 48 FSQSNMIGQGSYGSVY--KGILGEDE-MVVAVKVINLKQKGAFRSF--VAECEALRNIRH 102
F ++G+G YG V+ + + G + + A+KV LK+ R+ A +A RNI
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKV--LKKAMIVRNAKDTAHTKAERNILE 76
Query: 103 R-NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE---VFKLSLIQRVN 158
I+ + + + G + L+ EY+ G L L + +E F L+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLY--LILEYLSGGELFMQLEREGIFMEDTACFYLA------ 128
Query: 159 IAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASET 218
+++ A+ +LH Q +++ D+KP N++L++ + DFGL K S H T +
Sbjct: 129 ---EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHX 180
Query: 219 PSSSIGIKGTVGYVAP 234
GT+ Y+AP
Sbjct: 181 ------FCGTIEYMAP 190
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 30/194 (15%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRN------I 100
+F M+G+GS+G V+ + A+K LK+ EC +
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
H LT + C+ + F V EY+ G L H + H K L + A
Sbjct: 76 EHPFLTHMF--CTFQTKENLFF---VMEYLNGGDL--MYHIQSCH----KFDLSRATFYA 124
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPS 220
++ +++LH +V+ D+K N+LLD D + DFG+ K + L A
Sbjct: 125 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXF 178
Query: 221 SSIGIKGTVGYVAP 234
GT Y+AP
Sbjct: 179 C-----GTPDYIAP 187
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG GSY + + M AVKVI+ + R E E L +R+ IIT+
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSK----RDPSEEIEIL--LRYGQHPNIITLKD 88
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D + LV E M G L D + L S + + + +EYLH
Sbjct: 89 VYDDGKHVY--LVTELMRGGELLDKI------LRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 174 CQPPMVHGDIKPSNVLL----DNDMVAHVGDFGLSKFLSSDH 211
+VH D+KPSN+L N + DFG +K L +++
Sbjct: 141 G---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR-SFVAECEALRNIRHRNLTKIITIC 112
+G+GS+G V++ + AVK + L+ FR + C L + R I+ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPR------IVPLY 116
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
++ + + + E +E GSL + Q E L + + +EYLH
Sbjct: 117 GAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA------LEGLEYLHT 168
Query: 173 NCQPPMVHGDIKPSNVLLDND-MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
++HGD+K NVLL +D A + DFG + L D L + T I GT +
Sbjct: 169 R---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY---IPGTETH 222
Query: 232 VAP 234
+AP
Sbjct: 223 MAP 225
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 106/232 (45%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N+ ++ C+ G + ++ Y G
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVAYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D +T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVK----WMAP 228
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 54 IGQGSYGSVYKG-ILGEDEM----VVAVKVINLKQKGA----FRSFVAECEALRNI-RHR 103
+G+G++G V + G D+ VAVK++ ++GA R+ ++E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 82
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFK----------LSL 153
N+ ++ C+ K ++ E+ + G+L +L + +K L+L
Sbjct: 83 NVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 154 IQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+ + VA +E+L C +H D+ N+LL V + DFGL++ + D
Sbjct: 139 EHLICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR-SFVAECEALRNIRHRNLTKIITIC 112
+G+GS+G V++ + AVK + L+ FR + C L + R I+ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPR------IVPLY 130
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
++ + + + E +E GSL + Q E L + + +EYLH
Sbjct: 131 GAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA------LEGLEYLHT 182
Query: 173 NCQPPMVHGDIKPSNVLLDND-MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
++HGD+K NVLL +D A + DFG + L D L + T I GT +
Sbjct: 183 R---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY---IPGTETH 236
Query: 232 VAP 234
+AP
Sbjct: 237 MAP 239
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFR-SFVAECEALRNIRHRNLTKIITIC 112
+G+GS+G V++ + AVK + L+ FR + C L + R I+ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPR------IVPLY 132
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
++ + + + E +E GSL + Q E L + + +EYLH
Sbjct: 133 GAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA------LEGLEYLHT 184
Query: 173 NCQPPMVHGDIKPSNVLLDND-MVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
++HGD+K NVLL +D A + DFG + L D L + T I GT +
Sbjct: 185 R---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY---IPGTETH 238
Query: 232 VAP 234
+AP
Sbjct: 239 MAP 241
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 21/182 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLTKIITIC 112
+G+G+ G V + E VAVK++++K+ + E + + H N+ K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+ + + L EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYV 232
+ H DIKP N+LLD + DFGL+ ++ + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 233 AP 234
AP
Sbjct: 174 AP 175
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 54 IGQGSYGSVYKG-ILGEDEMVVAVKV-INLKQKGA----FRSFVAECEALRNI-RHRNLT 106
+G+G++G V + G D+ V + + ++GA R+ ++E + L +I H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFK----------LSLIQR 156
++ C+ K ++ E+ + G+L +L + +K L+L
Sbjct: 86 NLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 157 VNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+ + VA +E+L C +H D+ N+LL V + DFGL++ + D
Sbjct: 142 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F IG GS+G +Y G + VA+K+ N+K K + E + R +
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP--QLLYESKIYR------IL 59
Query: 107 KIITICSSIDSKG--ADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
+ T ++ G D+ LV + + SLED + + KLSL + +A +
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSR-----KLSLKTVLMLADQMI 113
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA---HVGDFGLSK 205
+ +E++H +H DIKP N L+ A ++ DFGL+K
Sbjct: 114 NRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 41/219 (18%)
Query: 29 MEKQFPMVSYAELSKATCE----FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQK 84
M ++ P EL+K E + + +G G+YGSV + VAVK K
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLS 56
Query: 85 GAFRSFV------AECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDW 138
F+S + E L++++H N+ ++ + + S + ++ L +
Sbjct: 57 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 139 LH---QTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+ T+DH++ +++ ++Y+H ++H D+KPSN+ ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 196 AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ DF L A T G T Y AP
Sbjct: 164 LKILDFYL-----------ARHTDDEMTGYVATRWYRAP 191
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 32/194 (16%)
Query: 52 NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAE--------CEALRNIRHR 103
+IG+G++ V + I E AVK++++ + + E C L++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH---- 85
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
I+ + + S G + +VFE+M+ L + + D V+ ++ + +
Sbjct: 86 --PHIVELLETYSSDGMLY--MVFEFMDGADLCFEIVKRADAGFVYSEAVAS--HYMRQI 139
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLSSDHLDTASETPS 220
A+ Y H N ++H D+KP NVLL +N +GDFG++ L L
Sbjct: 140 LEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG----- 191
Query: 221 SSIGIKGTVGYVAP 234
G GT ++AP
Sbjct: 192 ---GRVGTPHFMAP 202
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 54 IGQGSYGSVYKG-ILGEDEMVVAVKV-INLKQKGA----FRSFVAECEALRNI-RHRNLT 106
+G+G++G V + G D+ V + + ++GA R+ ++E + L +I H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFK----------LSLIQR 156
++ C+ K ++ E+ + G+L +L + +K L+L
Sbjct: 86 NLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 157 VNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
+ + VA +E+L C +H D+ N+LL V + DFGL++ + D
Sbjct: 142 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 106/232 (45%), Gaps = 44/232 (18%)
Query: 32 QFPM---VSYAELSK-ATCEFSQSNM-----IGQGSYGSVYKG-ILGEDE------MVVA 75
Q PM VS EL + EF + + +G+G++G V +G D+ + VA
Sbjct: 12 QDPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVA 71
Query: 76 VKVI-NLKQKGAFRSFVAECEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENG 133
VK++ + + V+E E ++ I +H+N+ ++ C+ G + ++ Y G
Sbjct: 72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVGYASKG 126
Query: 134 SLEDWLHQTN----------DHLEVFKLSLIQRVNIAIDVASAIEYL-HHNCQPPMVHGD 182
+L ++L + + +++ V+ +A +EYL C +H D
Sbjct: 127 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRD 182
Query: 183 IKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
+ NVL+ + V + DFGL++ + +++D +T + + +K ++AP
Sbjct: 183 LAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVK----WMAP 228
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLTK 107
+G G + V K + A K I +Q A R V+ E LR + H N
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN--- 76
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+IT+ +++ L+ E + G L D+L Q E S I+++ +
Sbjct: 77 VITLHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 168 EYLHHNCQPPMVHGDIKPSNV-LLDNDM-VAHVG--DFGLS 204
YLH + H D+KP N+ LLD ++ + H+ DFGL+
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLTK 107
+G G + V K + A K I +Q A R V+ E LR + H N
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN--- 76
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+IT+ +++ L+ E + G L D+L Q E S I+++ +
Sbjct: 77 VITLHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 168 EYLHHNCQPPMVHGDIKPSNV-LLDNDM-VAHVG--DFGLS 204
YLH + H D+KP N+ LLD ++ + H+ DFGL+
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 43 KATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAF--RSFVAECEALRNI 100
K + ++IG+GSYG VY VA+K +N + + + E L +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 101 RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLI---QRV 157
+ + ++ + D D +V E ++ D ++FK + Q V
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADS-----------DLKKLFKTPIFLTEQHV 133
Query: 158 N-IAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD 210
I ++ +++H + ++H D+KP+N LL+ D + DFGL++ ++SD
Sbjct: 134 KTILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 48 FSQSNMIGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIR 101
+ Q IG G+ G V + +LG + VAVK ++ Q A R++ E L+ +
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLG---INVAVKKLSRPFQNQTHAKRAY-RELVLLKCVN 81
Query: 102 HRNLTKIITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNI 159
H+N+ ++ + + +F+ LV E M + +L +H DH E L Q +
Sbjct: 82 HKNIISLLNVFTP-QKTLEEFQDVYLVMELM-DANLCQVIHMELDH-ERMSYLLYQML-- 136
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDT 214
I++LH ++H D+KPSN+++ +D + DFGL++ ++ + T
Sbjct: 137 -----CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMT 183
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSV-----YKGILGEDEMVVAVKVI----NLK 82
Q P E + F ++ +G G++G V Y I + M VAVK++ +L
Sbjct: 34 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 83 QKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQT 142
++ A S + L N H N+ ++ C+ ++ EY G L ++L +
Sbjct: 92 EREALMSELKVLSYLGN--HMNIVNLLGACTI-----GGPTLVITEYCCYGDLLNFLRRK 144
Query: 143 NDHLEVFKLS------------LIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVL 189
D K S L ++ + VA + +L NC +H D+ N+L
Sbjct: 145 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 200
Query: 190 LDNDMVAHVGDFGLSKFLSSD 210
L + + + DFGL++ + +D
Sbjct: 201 LTHGRITKICDFGLARHIKND 221
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLTK 107
+G G + V K + A K I +Q A R V+ E LR + H N
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN--- 76
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+IT+ +++ L+ E + G L D+L Q E S I+++ +
Sbjct: 77 VITLHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 168 EYLHHNCQPPMVHGDIKPSNV-LLDNDM-VAHVG--DFGLS 204
YLH + H D+KP N+ LLD ++ + H+ DFGL+
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLTK 107
+G G + V K + A K I +Q A R V+ E LR + H N
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN--- 76
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+IT+ +++ L+ E + G L D+L Q E S I+++ +
Sbjct: 77 VITLHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 168 EYLHHNCQPPMVHGDIKPSNV-LLDNDM-VAHVG--DFGLS 204
YLH + H D+KP N+ LLD ++ + H+ DFGL+
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLTK 107
+G G + V K + A K I +Q A R V+ E LR + H N
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN--- 76
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+IT+ +++ L+ E + G L D+L Q E S I+++ +
Sbjct: 77 VITLHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 168 EYLHHNCQPPMVHGDIKPSNV-LLDNDM-VAHVG--DFGLS 204
YLH + H D+KP N+ LLD ++ + H+ DFGL+
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFV------AECEALRNIRHRNLTK 107
+G G + V K + A K I +Q A R V E LR + H N
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN--- 76
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ +++ L+ E + G L D+L Q E S I+++ +
Sbjct: 77 IITLHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 168 EYLHHNCQPPMVHGDIKPSNV-LLDNDM-VAHVG--DFGLS 204
YLH + H D+KP N+ LLD ++ + H+ DFGL+
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSV-----YKGILGEDEMVVAVKVI----NLK 82
Q P E + F ++ +G G++G V Y I + M VAVK++ +L
Sbjct: 11 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68
Query: 83 QKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQT 142
++ A S + L N H N+ ++ C+ ++ EY G L ++L +
Sbjct: 69 EREALMSELKVLSYLGN--HMNIVNLLGACTI-----GGPTLVITEYCCYGDLLNFLRRK 121
Query: 143 NDHLEVFKLS------------LIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVL 189
D K S L ++ + VA + +L NC +H D+ N+L
Sbjct: 122 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 177
Query: 190 LDNDMVAHVGDFGLSKFLSSD 210
L + + + DFGL++ + +D
Sbjct: 178 LTHGRITKICDFGLARDIKND 198
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 22/129 (17%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
++++ + ++K D LV M G L+ ++ H+ + V A ++ +
Sbjct: 246 VVSLAYAYETK--DALCLVLTLMNGGDLKFHIY----HMGQAGFPEARAVFYAAEICCGL 299
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI--GI 225
E LH +V+ D+KP N+LLD+ + D GL A P G
Sbjct: 300 EDLHRE---RIVYRDLKPENILLDDHGHIRISDLGL-----------AVHVPEGQTIKGR 345
Query: 226 KGTVGYVAP 234
GTVGY+AP
Sbjct: 346 VGTVGYMAP 354
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSV-----YKGILGEDEMVVAVKVI----NLK 82
Q P E + F ++ +G G++G V Y I + M VAVK++ +L
Sbjct: 27 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 84
Query: 83 QKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQT 142
++ A S + L N H N+ ++ C+ ++ EY G L ++L +
Sbjct: 85 EREALMSELKVLSYLGN--HMNIVNLLGACTI-----GGPTLVITEYCCYGDLLNFLRRK 137
Query: 143 NDHLEVFKLS------------LIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVL 189
D K S L ++ + VA + +L NC +H D+ N+L
Sbjct: 138 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 193
Query: 190 LDNDMVAHVGDFGLSKFLSSD 210
L + + + DFGL++ + +D
Sbjct: 194 LTHGRITKICDFGLARDIKND 214
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 22/129 (17%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
++++ + ++K D LV M G L+ ++ H+ + V A ++ +
Sbjct: 246 VVSLAYAYETK--DALCLVLTLMNGGDLKFHIY----HMGQAGFPEARAVFYAAEICCGL 299
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI--GI 225
E LH +V+ D+KP N+LLD+ + D GL A P G
Sbjct: 300 EDLHRE---RIVYRDLKPENILLDDHGHIRISDLGL-----------AVHVPEGQTIKGR 345
Query: 226 KGTVGYVAP 234
GTVGY+AP
Sbjct: 346 VGTVGYMAP 354
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSV-----YKGILGEDEMVVAVKVI----NLK 82
Q P E + F ++ +G G++G V Y I + M VAVK++ +L
Sbjct: 34 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 83 QKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQT 142
++ A S + L N H N+ ++ C+ ++ EY G L ++L +
Sbjct: 92 EREALMSELKVLSYLGN--HMNIVNLLGACTI-----GGPTLVITEYCCYGDLLNFLRRK 144
Query: 143 NDHLEVFKLS------------LIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVL 189
D K S L ++ + VA + +L NC +H D+ N+L
Sbjct: 145 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 200
Query: 190 LDNDMVAHVGDFGLSKFLSSD 210
L + + + DFGL++ + +D
Sbjct: 201 LTHGRITKICDFGLARDIKND 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 22/190 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F+ ++G+GS+G V E + A+K+ LK+ + EC + R L
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEK-RVLALL 76
Query: 107 KIITICSSIDS--KGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVA 164
+ + S + D V EY+ G L + Q V K Q V A +++
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ------VGKFKEPQAVFYAAEIS 130
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIG 224
+ +LH +++ D+K NV+LD++ + DFG+ K D + T
Sbjct: 131 IGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRE-------- 179
Query: 225 IKGTVGYVAP 234
GT Y+AP
Sbjct: 180 FCGTPDYIAP 189
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 32 QFPMVSYAELSKATCEFSQSNMIGQGSYGSV-----YKGILGEDEMVVAVKVI----NLK 82
Q P E + F ++ +G G++G V Y I + M VAVK++ +L
Sbjct: 29 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 86
Query: 83 QKGAFRSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQT 142
++ A S + L N H N+ ++ C+ ++ EY G L ++L +
Sbjct: 87 EREALMSELKVLSYLGN--HMNIVNLLGACTI-----GGPTLVITEYCCYGDLLNFLRRK 139
Query: 143 NDHLEVFKLS------------LIQRVNIAIDVASAIEYL-HHNCQPPMVHGDIKPSNVL 189
D K S L ++ + VA + +L NC +H D+ N+L
Sbjct: 140 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 195
Query: 190 LDNDMVAHVGDFGLSKFLSSD 210
L + + + DFGL++ + +D
Sbjct: 196 LTHGRITKICDFGLARDIKND 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 36/205 (17%)
Query: 44 ATCE------FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLK--------QKGAFRS 89
A CE +S + +G G++G V+ + E V VK I + +
Sbjct: 16 AACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK 75
Query: 90 FVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVF 149
E L + H N+ K++ I +++G F LV E ++GS D + H
Sbjct: 76 VTLEIAILSRVEHANIIKVLDI---FENQG--FFQLVME--KHGSGLDLFAFIDRHP--- 125
Query: 150 KLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSS 209
+L I + SA+ YL ++H DIK N+++ D + DFG + +L
Sbjct: 126 RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182
Query: 210 DHLDTASETPSSSIGIKGTVGYVAP 234
L GT+ Y AP
Sbjct: 183 GKLFYT---------FCGTIEYCAP 198
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSF-VAECEALRNIRHRNLTKIITIC 112
+G+GS+G V++ + AVK + L+ FR+ + C L + R I+ +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSPR------IVPLY 151
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
++ + + + E +E GSL + + E L + + +EYLH
Sbjct: 152 GAV--REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA------LEGLEYLHS 203
Query: 173 NCQPPMVHGDIKPSNVLLDNDMV-AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
++HGD+K NVLL +D A + DFG + L D L + T I GT +
Sbjct: 204 R---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY---IPGTETH 257
Query: 232 VAP 234
+AP
Sbjct: 258 MAP 260
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G+G+YG VYK + + + ++ G S E LR ++H N+ + +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 114 SIDSKGADFKA-LVFEYMENGSLEDWLHQTNDHL------EVFKLSLIQRVNIAIDVASA 166
S AD K L+F+Y E+ D H H + +L ++ +
Sbjct: 89 S----HADRKVWLLFDYAEH----DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH----VGDFGLSKFLSS 209
I YLH N ++H D+KP+N+L+ + + D G ++ +S
Sbjct: 141 IHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + IG GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EYM G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + IG GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EYM G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 22/157 (14%)
Query: 54 IGQGSYGSVYKG--ILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G +Y G I +E+ + ++ + K E + + ++ I
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRW 72
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C + D+ +V E + SLED + + K SL + +A + S IEY+H
Sbjct: 73 CGA----EGDYNVMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIH 122
Query: 172 HNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSK 205
+H D+KP N L+ + ++ DFGL+K
Sbjct: 123 ---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 22/157 (14%)
Query: 54 IGQGSYGSVYKG--ILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G +Y G I +E+ + ++ + K E + + ++ I
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRW 70
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C + D+ +V E + SLED + + K SL + +A + S IEY+H
Sbjct: 71 CGA----EGDYNVMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIH 120
Query: 172 HNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSK 205
+H D+KP N L+ + ++ DFGL+K
Sbjct: 121 ---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 52 NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITI 111
+IG+GS+G V K + VA+K++ +K R E L ++R ++ + +
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+++ F+ + E S+ + + + F L L+++ A + ++ LH
Sbjct: 162 IHMLEN--FTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK--FAHSILQCLDALH 217
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVG--DFGLS 204
N ++H D+KP N+LL + + DFG S
Sbjct: 218 KN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
+YLH N ++H D+K N+ L+ D+ +GDFGL+ + D + + G
Sbjct: 131 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--------LCG 179
Query: 228 TVGYVAP 234
T Y+AP
Sbjct: 180 TPNYIAP 186
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
+YLH N ++H D+K N+ L+ D+ +GDFGL+ + D + + G
Sbjct: 135 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--------LCG 183
Query: 228 TVGYVAP 234
T Y+AP
Sbjct: 184 TPNYIAP 190
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
+YLH N ++H D+K N+ L+ D+ +GDFGL+ + D + + G
Sbjct: 131 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--------LCG 179
Query: 228 TVGYVAP 234
T Y+AP
Sbjct: 180 TPNYIAP 186
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 40 ELSKATCEFSQSNMIGQGSYGSVYK----GILGED-EMVVAVKVINLKQKGAFR-SFVAE 93
E + EF + ++G G++G V GI + VAVK++ K + R + ++E
Sbjct: 41 EFPRENLEFGK--VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 94 CEALRNI-RHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQ-----TNDHLE 147
+ + + H N+ ++ C+ G + L+FEY G L ++L + D +E
Sbjct: 99 LKMMTQLGSHENIVNLLGACTL---SGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIE 153
Query: 148 V---FKLSLIQRVNI---------AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMV 195
+L + +N+ A VA +E+L VH D+ NVL+ + V
Sbjct: 154 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKV 210
Query: 196 AHVGDFGLSKFLSSD 210
+ DFGL++ + SD
Sbjct: 211 VKICDFGLARDIMSD 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSF-VAECEALRNIRHRNLTKIITIC 112
+G+GS+G V++ + AVK + L+ FR+ + C L + R I+ +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSPR------IVPLY 132
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
++ + + + E +E GSL + + E L + + +EYLH
Sbjct: 133 GAV--REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA------LEGLEYLHS 184
Query: 173 NCQPPMVHGDIKPSNVLLDNDMV-AHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGY 231
++HGD+K NVLL +D A + DFG + L D L T I GT +
Sbjct: 185 R---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY---IPGTETH 238
Query: 232 VAP 234
+AP
Sbjct: 239 MAP 241
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y +L + VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIIS 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + +F+ LV E M + +L + DH E L Q +
Sbjct: 88 LLNVFTP-QKTLEEFQDVYLVMELM-DANLXQVIQMELDH-ERMSYLLYQ-------MLX 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 26/191 (13%)
Query: 48 FSQSNMIGQGSYGSVYKGILGEDEMVVAVKVIN---LKQKGAFRSFVAECEALRNIR-HR 103
F ++G+GS+G V + E + AVKV+ + Q + E L R H
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDV 163
LT++ + D V E++ G L + ++ + + A ++
Sbjct: 85 FLTQLFCCFQTPDRL-----FFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEI 133
Query: 164 ASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSI 223
SA+ +LH +++ D+K NVLLD++ + DFG+ K + + TA+
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT------- 183
Query: 224 GIKGTVGYVAP 234
GT Y+AP
Sbjct: 184 -FCGTPDYIAP 193
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 53 MIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITIC 112
+IG+GS+G V K + VA+K++ +K R E L ++R ++ + +
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHH 172
+++ F+ + E S+ + + + F L L+++ A + ++ LH
Sbjct: 163 HMLEN--FTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK--FAHSILQCLDALHK 218
Query: 173 NCQPPMVHGDIKPSNVLLDNDMVAHVG--DFGLS 204
N ++H D+KP N+LL + + DFG S
Sbjct: 219 N---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
IG GSY + I AVK+I+ + R E E L +R+ IIT+
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSK----RDPTEEIEIL--LRYGQHPNIITLKD 83
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
D + +V E + G L D + L S + + + +EYLH
Sbjct: 84 VYDD--GKYVYVVTELXKGGELLDKI------LRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 174 CQPPMVHGDIKPSNVLL----DNDMVAHVGDFGLSKFLSSDH 211
+VH D+KPSN+L N + DFG +K L +++
Sbjct: 136 G---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 108 IITICSSI-------DSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIA 160
I+ CS+ D+ A+F L+ + G L ++L + LS + I
Sbjct: 88 IVQFCSAASIGKEESDTGQAEF--LLLTELCKGQLVEFLKKMESR---GPLSCDTVLKIF 142
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
A++++H +PP++H D+K N+LL N + DFG + +S
Sbjct: 143 YQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLX 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQ--TNDHLEVFKLSLIQRVNIA 160
R T II + ++ + ALVFEY+ N + L+Q T+ + + L++
Sbjct: 90 RGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQ-LYQILTDFDIRFYMYELLK----- 143
Query: 161 IDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+ + D+GL++F
Sbjct: 144 -----ALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 182
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 22/157 (14%)
Query: 54 IGQGSYGSVYKG--ILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITI 111
IG GS+G +Y G I +E+ + ++ + K E + + ++ I
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKLECVKTKHP----QLHIESKFYKMMQGGVGIPSIKW 72
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
C + D+ +V E + SLED + + K SL + +A + S IEY+H
Sbjct: 73 CGA----EGDYNVMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIH 122
Query: 172 HNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSK 205
+H D+KP N L+ + ++ DFGL+K
Sbjct: 123 ---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
+YLH N ++H D+K N+ L+ D+ +GDFGL+ + D + G
Sbjct: 129 QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--------ERKKVLCG 177
Query: 228 TVGYVAP 234
T Y+AP
Sbjct: 178 TPNYIAP 184
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
R T II + ++ + ALVFEY+ N + L+Q L F + +
Sbjct: 95 RGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQ-LYQI---LTDFDIRFY-----MYE 145
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+ A++Y H ++H D+KP NV++D+ + D+GL++F
Sbjct: 146 LLKALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 187
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITICS 113
+G+G Y V++ I + VAVK++ +K + + E LR IIT+
Sbjct: 45 LGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGG-----PNIITLAD 99
Query: 114 SIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHN 173
+ + ALVFE++ N + L+QT L + + ++ A++Y H
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKALDYCH-- 148
Query: 174 CQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
++H D+KP NVL+D++ + D+GL++F
Sbjct: 149 -SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEF 181
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 27/161 (16%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVIN------LKQKGAFRSFVAECEALRNIRHRNLTK 107
+G G+YGSV I VA+K ++ + K A+R E L++++H N+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLKHMQHENVIG 87
Query: 108 IITICSSIDS--KGADFKALVFEYMENGSLEDWLHQTN-DHLEVFKLSLIQRVNIAIDVA 164
++ + + S DF LV +M QT+ + K S + + +
Sbjct: 88 LLDVFTPASSLRNFYDF-YLVMPFM----------QTDLQKIMGLKFSEEKIQYLVYQML 136
Query: 165 SAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++Y+H +VH D+KP N+ ++ D + DFGL++
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLA 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y +L + VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIIS 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + +F+ LV E M+ +L + DH E L Q +
Sbjct: 88 LLNVFTP-QKTLEEFQDVYLVMELMD-ANLXQVIQMELDH-ERMSYLLYQ-------MLC 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 30/147 (20%)
Query: 88 RSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE 147
R F+AE + H ++ +I D G +V EY+ SL+ Q
Sbjct: 130 RQFLAE------VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ------ 177
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFL 207
KL + + + +++ A+ YLH +V+ D+KP N++L + + + +S+
Sbjct: 178 --KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLIDLGAVSRIN 232
Query: 208 SSDHLDTASETPSSSIGIKGTVGYVAP 234
S +L GT G+ AP
Sbjct: 233 SFGYL-------------YGTPGFQAP 246
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
+YLH N ++H D+K N+ L+ D+ +GDFGL+ + D + G
Sbjct: 155 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--------ERKKVLCG 203
Query: 228 TVGYVAP 234
T Y+AP
Sbjct: 204 TPNYIAP 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 53 MIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLTKIITI 111
+IG+G++G V + V A+K+++ K + RS A R+I N ++ +
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 112 -CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
C+ D K + +V EYM G L + L D E + V +A+D ++
Sbjct: 141 FCAFQDDK---YLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMG-- 194
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSD---HLDTASETPS 220
++H D+KP N+LLD + DFG + H DTA TP
Sbjct: 195 -------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
+YLH N ++H D+K N+ L+ D+ +GDFGL+ + D + G
Sbjct: 153 QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--------ERKKVLCG 201
Query: 228 TVGYVAP 234
T Y+AP
Sbjct: 202 TPNYIAP 208
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 123 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 174
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K ++ +
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGATWTLC 220
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 221 GTPEYLAP 228
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y +L + VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIS 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + +F+ LV E M + +L + DH E L Q +
Sbjct: 88 LLNVFTP-QKTLEEFQDVYLVMELM-DANLXQVIQMELDH-ERMSYLLYQ-------MLX 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y +L + VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIS 80
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + +F+ LV E M+ +L + DH E L Q +
Sbjct: 81 LLNVFTP-QKTLEEFQDVYLVMELMD-ANLXQVIQMELDH-ERMSYLLYQ-------MLX 130
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE 217
+ + + A+ YL + ++H D+KPSN+LLD + DFG+S L D S
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 218 TPSSSIGIKGTVGYVAP 234
G Y+AP
Sbjct: 186 ---------GCAAYMAP 193
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + IG GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRRIG------RFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + S A +
Sbjct: 95 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRRIG------RFSEPHARFYAAQIVLT 146
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 192
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 193 GTPEYLAP 200
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEYSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEYSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEYSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y IL E VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVVAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIG 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + S +F+ +V E M + +L + DH E L Q +
Sbjct: 88 LLNVFTPQKSL-EEFQDVYIVMELM-DANLSQVIQMELDH-ERMSYLLYQ-------MLV 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y IL E VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIG 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + S +F+ +V E M + +L + DH E L Q +
Sbjct: 88 LLNVFTPQKSL-EEFQDVYIVMELM-DANLSQVIQMELDH-ERMSYLLYQ-------MLV 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y IL E VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIG 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + S +F+ +V E M + +L + DH E L Q +
Sbjct: 88 LLNVFTPQKSL-EEFQDVYIVMELM-DANLSQVIQMELDH-ERMSYLLYQ-------MLC 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 52 NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITI 111
+IG+G +G V K + VA+K++ +K R E L ++R ++ + +
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 112 CSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLH 171
+++ F+ + E S+ + + + F L L+++ A + ++ LH
Sbjct: 162 IHMLEN--FTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK--FAHSILQCLDALH 217
Query: 172 HNCQPPMVHGDIKPSNVLLDNDMVAHVG--DFGLS 204
N ++H D+KP N+LL + + DFG S
Sbjct: 218 KN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 123 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 174
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
EYLH +++ D+KP N+L+D V DFG +K
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + S A +
Sbjct: 89 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRRIG------RFSEPHARFYAAQIVLT 140
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----------RVKGRTWXLC 186
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 187 GTPEYLAP 194
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y IL E VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIG 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + S +F+ +V E M + +L + DH E L Q +
Sbjct: 88 LLNVFTPQKSL-EEFQDVYIVMELM-DANLSQVIQMELDH-ERMSYLLYQ-------MLV 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y IL E VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIG 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + S +F+ +V E M + +L + DH E L Q +
Sbjct: 88 LLNVFTPQKSL-EEFQDVYIVMELM-DANLSQVIQMELDH-ERMSYLLYQ-------MLC 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 103 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 154
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 200
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
EYLH +++ D+KP N+L+D V DFG +K
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 103 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 154
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 200
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 103 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 154
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 200
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVIN------LKQKGAFRSFVAECEALRNIRHRNLTK 107
+G G+YGSV I VA+K ++ + K A+R E L++++H N+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR----ELLLLKHMQHENVIG 105
Query: 108 IITICSSIDS--KGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + S DF LV +M+ Q +E F IQ + +
Sbjct: 106 LLDVFTPASSLRNFYDF-YLVMPFMQTDL------QKIMGME-FSEEKIQ--YLVYQMLK 155
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
++Y+H +VH D+KP N+ ++ D + DFGL++
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
EYLH +++ D+KP N+L+D V DFG +K
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 19/182 (10%)
Query: 39 AELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAEC---- 94
AEL ++ I GSYG+V G+ E V +V N G + +++
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 95 EALRNIR------HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEV 148
LR IR H N+ + I + LV E M D +D V
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT----DLAQVIHDQRIV 130
Query: 149 FKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
IQ I + LH + +VH D+ P N+LL ++ + DF L++ +
Sbjct: 131 ISPQHIQYFMYHILLG-----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDT 185
Query: 209 SD 210
+D
Sbjct: 186 AD 187
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 103 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 154
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 200
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + S A +
Sbjct: 88 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRRIG------RFSEPHARFYAAQIVLT 139
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 140 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWTLC 185
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 186 GTPEYLAP 193
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 19/182 (10%)
Query: 39 AELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAEC---- 94
AEL ++ I GSYG+V G+ E V +V N G + +++
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 95 EALRNIR------HRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEV 148
LR IR H N+ + I + LV E M D +D V
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT----DLAQVIHDQRIV 130
Query: 149 FKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLS 208
IQ I + LH + +VH D+ P N+LL ++ + DF L++ +
Sbjct: 131 ISPQHIQYFMYHILLG-----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDT 185
Query: 209 SD 210
+D
Sbjct: 186 AD 187
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 52 NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA----LRNIRHRNLTK 107
++IG+GS+G V K ++ VA+K+I K K AF + A+ E L N +H K
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLN-QAQIEVRLLELMN-KHDTEMK 115
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ + LVFE M + +L D L TN L+L ++ A + +A+
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN--FRGVSLNLTRK--FAQQMCTAL 170
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVG--DFGLS 204
+L + ++H D+KP N+LL N + + DFG S
Sbjct: 171 LFL-ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y +L + VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIIS 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + +F+ LV E M+ +L + DH E L Q +
Sbjct: 88 LLNVFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQ-------MLC 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINL---KQKGAFRSFVAECEALRNIRHRNLTK 107
IG G+ G V Y IL E VA+K ++ Q A R++ E ++ + H+N+
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIG 87
Query: 108 IITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVAS 165
++ + + S +F+ +V E M + +L + DH E L Q +
Sbjct: 88 LLNVFTPQKSL-EEFQDVYIVMELM-DANLSQVIQMELDH-ERMSYLLYQ-------MLC 137
Query: 166 AIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 52 NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA----LRNIRHRNLTK 107
++IG+GS+G V K ++ VA+K+I K K AF + A+ E L N +H K
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLN-QAQIEVRLLELMN-KHDTEMK 115
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ + LVFE M + +L D L TN L+L ++ A + +A+
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN--FRGVSLNLTRK--FAQQMCTAL 170
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDN--DMVAHVGDFGLS 204
+L + ++H D+KP N+LL N + DFG S
Sbjct: 171 LFL-ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS 208
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + E A +
Sbjct: 95 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRRIGRFXEP------HARFYAAQIVLT 146
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 192
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 193 GTPEYLAP 200
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 103 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 154
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 200
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHR-----NLTKI 108
+G G + +V+ + + VA+KV+ + + + E L+++R+ N +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-ETALDEIRLLKSVRNSDPNDPNREMV 87
Query: 109 ITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+ + G + +VFE + + L+ W+ ++N + L +++ I V
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGHHLLK-WIIKSN--YQGLPLPCVKK--IIQQVLQG 142
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL 190
++YLH C+ ++H DIKP N+LL
Sbjct: 143 LDYLHTKCR--IIHTDIKPENILL 164
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 52 NMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEA----LRNIRHRNLTK 107
++IG+GS+G V K ++ VA+K+I K K AF + A+ E L N +H K
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLN-QAQIEVRLLELMN-KHDTEMK 96
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+ + LVFE M + +L D L TN L+L ++ A + +A+
Sbjct: 97 YYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTN--FRGVSLNLTRK--FAQQMCTAL 151
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVG--DFGLS 204
+L + ++H D+KP N+LL N + + DFG S
Sbjct: 152 LFL-ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 189
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 103 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 154
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWTLC 200
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 84/186 (45%), Gaps = 15/186 (8%)
Query: 54 IGQG--SYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIITI 111
+G+G SY + +G+ D A+K I ++ E + R H N+ +++
Sbjct: 37 LGEGGFSYVDLVEGL--HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 112 CSSIDSKGADFKA-LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
C + +GA +A L+ + + G+L + + + D L+ Q + + + + +E +
Sbjct: 95 C--LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF--LTEDQILWLLLGICRGLEAI 150
Query: 171 HHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASE--TPSSSIGIKGT 228
H H D+KP+N+LL ++ + D G S + H++ + + T + T
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLG-SMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 229 VGYVAP 234
+ Y AP
Sbjct: 207 ISYRAP 212
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + E A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGRFXEP------HARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 96
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + E A +
Sbjct: 97 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGRFXEP------HARFYAAQIVLT 148
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 194
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 195 GTPEYLAP 202
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHR-----NLTKI 108
+G G + +V+ + + VA+KV+ + + + E L+++R+ N +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-ETALDEIRLLKSVRNSDPNDPNREMV 103
Query: 109 ITICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
+ + G + +VFE + + L+ W+ ++N + L +++ I V
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLK-WIIKSN--YQGLPLPCVKK--IIQQVLQG 158
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLL 190
++YLH C+ ++H DIKP N+LL
Sbjct: 159 LDYLHTKCR--IIHTDIKPENILL 180
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+++D V DFGL+K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + E A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGRFXEP------HARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + E A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGRFXEP------HARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 11/159 (6%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + E A +
Sbjct: 123 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRRIGRFXEP------HARFYAAQIVLT 174
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
EYLH +++ D+KP N+L+D V DFG +K
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + + A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFAEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+L+D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A + EYLH +++ D+KP N+L+D V DFG +K
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVK 193
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 11/159 (6%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY+ G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
EYLH +++ D+KP N+++D V DFG +K
Sbjct: 154 FEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+++D V DFGL+K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 125 LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIK 184
+V EYM G L + L D E + V +A+D ++ ++H D+K
Sbjct: 151 MVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR---------DVK 200
Query: 185 PSNVLLDNDMVAHVGDFGLSKFLSSDHL---DTASETPS 220
P N+LLD + DFG ++ + + DTA TP
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 34 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 83
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 84 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 134
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 135 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A + EYLH +++ D+KP N+L+D V DFG +K
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 27/146 (18%)
Query: 93 ECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLS 152
E LR IRH N IIT+ ++K D L+ E + G L D+L + E
Sbjct: 65 EVNILREIRHPN---IITLHDIFENK-TDV-VLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 153 LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH----VGDFGLSKFLS 208
++++ + YLH + H D+KP N++L + V + + DFG++ +
Sbjct: 120 FLKQI------LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI- 169
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
E + I GT +VAP
Sbjct: 170 --------EAGNEFKNIFGTPEFVAP 187
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 37 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 86
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 87 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 137
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 138 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 27/146 (18%)
Query: 93 ECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLS 152
E LR IRH N IIT+ ++K D L+ E + G L D+L + E
Sbjct: 79 EVNILREIRHPN---IITLHDIFENK-TDV-VLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 153 LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH----VGDFGLSKFLS 208
++++ + YLH + H D+KP N++L + V + + DFG++ +
Sbjct: 134 FLKQI------LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI- 183
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
E + I GT +VAP
Sbjct: 184 --------EAGNEFKNIFGTPEFVAP 201
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 81
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 133 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A + EYLH +++ D+KP N+L+D V DFG +K
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A + EYLH +++ D+KP N+L+D V DFG +K
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 91
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M+ +L + DH E L Q + I+
Sbjct: 92 VFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQ-------MLCGIK 141
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 128
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M+ +L + DH E L Q + I+
Sbjct: 129 VFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQML-------CGIK 178
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 179 HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 89
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M+ +L + DH E L Q + I+
Sbjct: 90 VFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQ-------MLCGIK 139
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 140 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 90
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M+ +L + DH E L Q + I+
Sbjct: 91 VFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQ-------MLCGIK 140
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.9 bits (76), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 125 LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIK 184
+V EYM G L + L D E + V +A+D ++ ++H D+K
Sbjct: 146 MVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR---------DVK 195
Query: 185 PSNVLLDNDMVAHVGDFGLSKFLSSDHL---DTASETPS 220
P N+LLD + DFG ++ + + DTA TP
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 33.9 bits (76), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 33 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 82
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 83 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 133
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 134 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 33.9 bits (76), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSS 222
+ + YLH N +VH D+KP N+LL + + +GD + F S + A E
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSS--IYPLGDIKIVDFGMSRKIGHACELRE-- 192
Query: 223 IGIKGTVGYVAP 234
I GT Y+AP
Sbjct: 193 --IMGTPEYLAP 202
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 90
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M + +L + DH E L Q + I+
Sbjct: 91 VFTP-QKTLEEFQDVYLVMELM-DANLCQVIQMELDH-ERMSYLLYQ-------MLCGIK 140
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 27/146 (18%)
Query: 93 ECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLS 152
E LR IRH N IIT+ ++K D L+ E + G L D+L + E
Sbjct: 58 EVNILREIRHPN---IITLHDIFENK-TDV-VLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 153 LIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH----VGDFGLSKFLS 208
++++ + YLH + H D+KP N++L + V + + DFG++ +
Sbjct: 113 FLKQI------LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI- 162
Query: 209 SDHLDTASETPSSSIGIKGTVGYVAP 234
E + I GT +VAP
Sbjct: 163 --------EAGNEFKNIFGTPEFVAP 180
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 125 LVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIK 184
+V EYM G L + L D E + V +A+D ++ ++H D+K
Sbjct: 151 MVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHR---------DVK 200
Query: 185 PSNVLLDNDMVAHVGDFGLSKFLSSDHL---DTASETPS 220
P N+LLD + DFG ++ + + DTA TP
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 91
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M + +L + DH E L Q + I+
Sbjct: 92 VFTP-QKTLEEFQDVYLVMELM-DANLCQVIQMELDH-ERMSYLLYQ-------MLCGIK 141
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 83
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M+ +L + DH E L Q + I+
Sbjct: 84 VFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQ-------MLCGIK 133
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 81
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 133 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 81
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 133 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 84
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M+ +L + DH E L Q + I+
Sbjct: 85 VFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQ-------MLCGIK 134
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 81
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 84
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M+ +L + DH E L Q + I+
Sbjct: 85 VFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQ-------MLCGIK 134
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 32 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 81
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 132
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 133 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y IL E VA+K ++ R F + A R R L K +
Sbjct: 26 IGSGAQGIVCAAYDAIL---ERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVN 75
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID-------- 162
+ I L+ + SLE++ +E+ +L Q + + +D
Sbjct: 76 HKNII--------GLLNVFTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLL 126
Query: 163 --VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+ I++LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 127 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 54 IGQGSYGSV---YKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLTKIIT 110
IG G+ G V Y +L + + + Q A R++ E ++ + H+N+ ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 128
Query: 111 ICSSIDSKGADFK--ALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIE 168
+ + +F+ LV E M+ +L + DH E L Q + I+
Sbjct: 129 VFTP-QKTLEEFQDVYLVMELMD-ANLCQVIQMELDH-ERMSYLLYQML-------CGIK 178
Query: 169 YLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSK 205
+LH ++H D+KPSN+++ +D + DFGL++
Sbjct: 179 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY G + L + + + S A +
Sbjct: 103 FLVKLEFSFKDNSNLY--MVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 154
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+++D V DFG +K + +
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVKGRTWXLC 200
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
R IIT+ + + ALVFE++ N + D+ F + +
Sbjct: 89 RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM---------YE 139
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+ A++Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 140 ILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 33/191 (17%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLTK 107
+G G + V K + A K I ++ + R V+ E L+ I+H N
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN--- 75
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+IT+ ++K L+ E + G L D+L + E ++++ + +
Sbjct: 76 VITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQI------LNGV 127
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA----HVGDFGLSKFLSSDHLDTASETPSSSI 223
YLH + Q + H D+KP N++L + V + DFGL+ +D +E +
Sbjct: 128 YYLH-SLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKN--- 176
Query: 224 GIKGTVGYVAP 234
I GT +VAP
Sbjct: 177 -IFGTPAFVAP 186
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 144
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+++D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 144
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 144
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 103 RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAID 162
R IIT+ + + ALVFE++ N + D+ F + +
Sbjct: 94 RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM---------YE 144
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+ A++Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 ILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 186
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 144
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 143
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 144 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 143
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 144 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 144
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 144
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 43 KATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAEC-EALRNIR 101
K F M GQG++G+V G M VA+K + Q FR+ + + L +
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV--IQDPRFRNRELQIMQDLAVLH 77
Query: 102 HRNLTKIITICSSIDSKGAD--FKALVFEYMENGSLEDWLHQTNDH------------LE 147
H N+ ++ + ++ + + +V EY + D LH+ + ++
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEY-----VPDTLHRCCRNYYRRQVAPPPILIK 132
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDN-DMVAHVGDFGLSKF 206
VF LI+ + H + H DIKP NVL++ D + DFG +K
Sbjct: 133 VFLFQLIRSIGCL-----------HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181
Query: 207 LSSDHLDTA 215
LS + A
Sbjct: 182 LSPSEPNVA 190
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 144
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + L+QT L + + ++ A+
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT---LTDYDIRFY-----MYEILKAL 142
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 143 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMV-----VAVKV-----------INLKQKGAF 87
A E+ IGQG +G +Y + E V VKV + Q+ A
Sbjct: 33 AKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 88 RSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE 147
+ + R +++ + K D G ++ ++ + GS +++ N
Sbjct: 93 PEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRF--GSDLQKIYEAN---- 145
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD--NDMVAHVGDFGLS 204
+ S + +++ + +EY+H + VHGDIK SN+LL+ N ++ D+GL+
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 44 ATCEFSQSNMIGQGSYGSVYKGILGEDEMV-----VAVKV-----------INLKQKGAF 87
A E+ IGQG +G +Y + E V VKV + Q+ A
Sbjct: 33 AKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 88 RSFVAECEALRNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLE 147
+ + R +++ + K D G ++ ++ + GS +++ N
Sbjct: 93 PEQIQKWIRTRKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRF--GSDLQKIYEAN---- 145
Query: 148 VFKLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD--NDMVAHVGDFGLS 204
+ S + +++ + +EY+H + VHGDIK SN+LL+ N ++ D+GL+
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVI-NLKQKGAFRSFVAECEALRNIRHRNLTKIITIC 112
+G G++G V +++ AVKV+ N+K+ RS E + L+ I++ ++ +
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT--RSAKIEADILKKIQNDDINNNNIVK 100
Query: 113 SSIDSKGADFKALVFEYMENGSLEDWLHQTND---HLEVFKLSLIQRVNIAIDVASAIEY 169
D L+FE + SL + + + N H+E KL I++ A+ Y
Sbjct: 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKL-------YCIEILKALNY 152
Query: 170 LHHNCQPPMVHGDIKPSNVLLDN 192
L + + H D+KP N+LLD+
Sbjct: 153 LR---KMSLTHTDLKPENILLDD 172
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 33/187 (17%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAE---CEALRNIRHRNLTKIIT 110
+G+GS+ K + + AVK+I+ + + + + CE H N+ K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG-----HPNIVKLHE 73
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ + F LV E + G L + + + H + S I R + SA+ ++
Sbjct: 74 V---FHDQLHTF--LVMELLNGGELFERI-KKKKHFSETEASYIMR-----KLVSAVSHM 122
Query: 171 HHNCQPPMVHGDIKPSNVLL---DNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKG 227
H +VH D+KP N+L ++++ + DFG ++ D + +TP
Sbjct: 123 H---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPCF------ 171
Query: 228 TVGYVAP 234
T+ Y AP
Sbjct: 172 TLHYAAP 178
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 54 IGQGSYGSVYKGI-LGEDEMVVAVKVINLKQKGAFRSFVA-ECEALRNIRHRNL-TKIIT 110
+G+G++G V + + + VA+K+I + G +R E L+ I+ ++ K +
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKII--RNVGKYREAARLEINVLKKIKEKDKENKFLC 84
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ S + FE + + E +L + N + + L ++ ++A + A+ +L
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGKNTFE-FLKENN--FQPYPLPHVR--HMAYQLCHALRFL 139
Query: 171 HHNCQPPMVHGDIKPSNVLLDN 192
H N + H D+KP N+L N
Sbjct: 140 HEN---QLTHTDLKPENILFVN 158
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 179 VHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIKGTVGYVAP 234
H D+KP N+L+ D A++ DFG++ + + L T GT+ Y AP
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT-------VGTLYYXAP 204
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 54 IGQGSYGSVYKGI-LGEDEMVVAVKVINLKQKGAFRSFVA-ECEALRNIRHRNL-TKIIT 110
+G+G++G V + + + VA+K+I + G +R E L+ I+ ++ K +
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKII--RNVGKYREAARLEINVLKKIKEKDKENKFLC 93
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ S + FE + + E +L + N + + L ++ ++A + A+ +L
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGKNTFE-FLKENN--FQPYPLPHVR--HMAYQLCHALRFL 148
Query: 171 HHNCQPPMVHGDIKPSNVLLDN 192
H N + H D+KP N+L N
Sbjct: 149 HEN---QLTHTDLKPENILFVN 167
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRHRNLT 106
+F + +G GS+G V E A+K+++ ++ + R ++ N
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 107 KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASA 166
++ + S + +V EY G + L + + + S A +
Sbjct: 102 FLVKLEFSFKDNSNLY--MVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVLT 153
Query: 167 IEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSSSIGIK 226
EYLH +++ D+KP N+++D V DFG +K + +
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVKGRTWXLC 199
Query: 227 GTVGYVAP 234
GT Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 54 IGQGSYGSVYKGI-LGEDEMVVAVKVINLKQKGAFRSFVA-ECEALRNIRHRNL-TKIIT 110
+G+G++G V + + + VA+K+I + G +R E L+ I+ ++ K +
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKII--RNVGKYREAARLEINVLKKIKEKDKENKFLC 116
Query: 111 ICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAIEYL 170
+ S + FE + + E +L + N + + L ++ ++A + A+ +L
Sbjct: 117 VLMSDWFNFHGHMCIAFELLGKNTFE-FLKENN--FQPYPLPHVR--HMAYQLCHALRFL 171
Query: 171 HHNCQPPMVHGDIKPSNVLLDN 192
H N + H D+KP N+L N
Sbjct: 172 HEN---QLTHTDLKPENILFVN 190
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A + EYLH +++ D+KP N+++D V DFG +K
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
IIT+ + + ALVFE++ N + D+ F + ++ A+
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRFYM---------YEILKAL 144
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
+Y H ++H D+KP NV++D++ + D+GL++F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A + EYLH +++ D+KP N+++D V DFG +K
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A + EYLH +++ D+KP N+++D V DFG +K
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 194 GRTWXLCGTPEYLAP 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 160 AIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETP 219
A + EYLH +++ D+KP N+++D V DFG +K
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 192
Query: 220 SSSIGIKGTVGYVAP 234
+ + GT Y+AP
Sbjct: 193 GRTWXLCGTPEYLAP 207
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 108 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 157
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 158 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 196
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 33/191 (17%)
Query: 54 IGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVA------ECEALRNIRHRNLTK 107
+G G + V K + A K I ++ + R V+ E L+ I+H N
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN--- 75
Query: 108 IITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAIDVASAI 167
+IT+ ++K L+ E + G L D+L + E ++++ + +
Sbjct: 76 VITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQI------LNGV 127
Query: 168 EYLHHNCQPPMVHGDIKPSNVLLDNDMVA----HVGDFGLSKFLSSDHLDTASETPSSSI 223
YLH + Q + H D+KP N++L + V + DFGL+ +D +E +
Sbjct: 128 YYLH-SLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKN--- 176
Query: 224 GIKGTVGYVAP 234
I GT +VAP
Sbjct: 177 -IFGTPEFVAP 186
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 88 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 137
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 138 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 88 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 137
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 138 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 89 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 138
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 139 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 177
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 136
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 137 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 28/169 (16%)
Query: 54 IGQGSYGSVYKGILGEDEMV-----VAVKV-----------INLKQKGAFRSFVAECEAL 97
IGQG +G +Y + E V VKV + Q+ A + +
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 98 RNIRHRNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRV 157
R +++ + K D G ++ ++ + GS +++ N + S +
Sbjct: 103 RKLKYLGVPKYWG-SGLHDKNGKSYRFMIMDRF--GSDLQKIYEAN----AKRFSRKTVL 155
Query: 158 NIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLD--NDMVAHVGDFGLS 204
+++ + +EY+H + VHGDIK SN+LL+ N ++ D+GL+
Sbjct: 156 QLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 136
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 137 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 38 YAELSKATCEFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEAL 97
Y + + + F + IG+G++ SVY + A + ++K A + + +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVY--------LATAQLQVGPEEKIALKHLIPTSHPI 64
Query: 98 RNIRHRNLTKIITICSSIDS--------KGADFKALVFEYMENGSLEDWLHQTNDHLEVF 149
R + +T+ D+ + D + Y+E+ S D L+
Sbjct: 65 RIAAE---LQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN--------- 112
Query: 150 KLSLIQRVNIAIDVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAH-VGDFGLSK 205
LS + +++ A++ +H Q +VH D+KPSN L + + + + DFGL++
Sbjct: 113 SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 136
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 137 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 136
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 137 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 28/193 (14%)
Query: 47 EFSQSNMIGQGSYGSVYKGILGEDEMVVAVKVINLKQKGAFRSFVAECEALRNIRH---- 102
+F +IG+GSY V L + + + A+KV+ K + + + ++ +H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVV----KKELVNDDEDIDWVQTEKHVFEQ 61
Query: 103 -RNLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDHLEVFKLSLIQRVNIAI 161
N ++ + S ++ F V EY+ G L H KL +
Sbjct: 62 ASNHPFLVGLHSCFQTESRLF--FVIEYVNGGDL--MFHMQRQR----KLPEEHARFYSA 113
Query: 162 DVASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVAHVGDFGLSKFLSSDHLDTASETPSS 221
+++ A+ YLH +++ D+K NVLLD++ + D+G+ K +
Sbjct: 114 EISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------EGLRPGDT 162
Query: 222 SIGIKGTVGYVAP 234
+ GT Y+AP
Sbjct: 163 TSXFCGTPNYIAP 175
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 104 NLTKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQTNDH-LEVFKLSLIQRVNIAID 162
N+ K++ I SK +L+FEY+ N + D+ + + L++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLK------- 136
Query: 163 VASAIEYLHHNCQPPMVHGDIKPSNVLLDNDMVA-HVGDFGLSKF 206
A++Y H ++H D+KP NV++D+++ + D+GL++F
Sbjct: 137 ---ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,640,090
Number of Sequences: 62578
Number of extensions: 256600
Number of successful extensions: 2483
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 1107
length of query: 234
length of database: 14,973,337
effective HSP length: 96
effective length of query: 138
effective length of database: 8,965,849
effective search space: 1237287162
effective search space used: 1237287162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)