BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039261
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8XYZ2|SDHF2_CAEBR Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Caenorhabditis briggsae GN=CBG20928 PE=3 SV=1
Length = 122
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP--DLWKWLTGQEQP 126
RLLY+SK+RG LE D++LG + EE++ M E +KA ++N E+ DL+ +L+ ++ P
Sbjct: 38 RLLYQSKKRGILENDILLGNFAEENLKKMSEPELKAYDKLINGEHMEWDLFYYLSNKKTP 97
Query: 127 PEAVKTNPVFSALHNKV 143
PE V+ V+ + V
Sbjct: 98 PEDVEKCSVYQKVKKFV 114
>sp|Q9NA72|SDHF2_CAEEL Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Caenorhabditis elegans GN=Y57A10A.29 PE=3 SV=1
Length = 119
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP--DLWKWLTGQEQP 126
RLLY+SK+RG LE D++LG + E+++ M E +KA ++N E+ DL+ +L+ ++ P
Sbjct: 35 RLLYQSKKRGILENDILLGDFAEQNLKKMSEPELKAYDKLINGEHMEWDLFYYLSNKKSP 94
Query: 127 PEAVKTNPVFSALHNKV 143
PE V++ V+ + V
Sbjct: 95 PEDVESCQVYQKVKKFV 111
>sp|Q54B20|SDHF2_DICDI Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Dictyostelium discoideum GN=DDB_G0293946 PE=3 SV=1
Length = 141
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 25 SIASASPAASFETLLRPQYRWVSNTTQSLDIDLSNDEKKKRLFN----------RLLYRS 74
SI + F T + + SN I DE K ++ N +LLY+S
Sbjct: 4 SIKQIKSSIGFITTNTTRRNFCSNKIGGFTIKNVEDESKIKINNEISEIEKLRKKLLYQS 63
Query: 75 KQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPEAVKT 132
K+RG LE DL+LG + +IH + E+ ++ +L +PD++ W+ + + PE +T
Sbjct: 64 KERGMLENDLLLGSFATLNIHKLTESQLRDYNLLLQQPDPDIFNWILKKAEVPEEFET 121
>sp|Q5WWK6|Y1447_LEGPL Uncharacterized protein lpl1447 OS=Legionella pneumophila (strain
Lens) GN=lpl1447 PE=3 SV=1
Length = 79
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RLL++ + RG LELDLVL K++ I + EN +KA ++L +P+L+ WL G E+P +
Sbjct: 8 RLLWKCR-RGMLELDLVLQKFIANEIDRLTENQLKAFDNLLTHNDPNLYAWLMGHEEPEK 66
Query: 129 AV 130
+
Sbjct: 67 EL 68
>sp|B6JZ70|SDHF2_SCHJY Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Schizosaccharomyces japonicus (strain yFS275 /
FY16936) GN=emi5 PE=3 SV=1
Length = 143
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 61 EKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWL 120
E +K L +RL+Y+S++RG LE DL+L + +E++ + +K ++LN + D+ W
Sbjct: 48 ETEKLLRSRLVYQSRKRGILETDLILSGFAKEYLSKYNVELLKEYDNLLNEADWDILYWC 107
Query: 121 TGQEQPPEAVKTNPVFSALHNKVMNNLNSYAS 152
TG+ Q PE L+++V+ +L Y S
Sbjct: 108 TGERQAPE--------HWLNSRVLRDLKEYLS 131
>sp|Q5X4Y4|Y1536_LEGPA Uncharacterized protein lpp1536 OS=Legionella pneumophila (strain
Paris) GN=lpp1536 PE=3 SV=1
Length = 79
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RLL++ + RG LELDL+L K++ I + EN +KA ++L +P L+ WL G E+P +
Sbjct: 8 RLLWKCR-RGMLELDLLLQKFIANEIDRLTENQLKAFDNLLTHNDPSLYAWLMGHEEPEK 66
Query: 129 AV 130
+
Sbjct: 67 EL 68
>sp|P0CR32|SDHF2_CRYNJ Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=EMI5 PE=3 SV=1
Length = 175
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 61 EKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWL 120
E +K L RL+Y++++RG LE DL+L + + + +MD +K +L+ + D++ W
Sbjct: 73 EDEKTLRARLIYQTRKRGTLETDLILSTFARDELPNMDFEEMKQFDKLLDEPDWDIFYWS 132
Query: 121 TGQEQPPEAVKTNPVFSALHNKVMN 145
+ PP K P+ L N
Sbjct: 133 VKKRDPPARWKGTPLLEKLQKHAKN 157
>sp|P0CR33|SDHF2_CRYNB Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=EMI5 PE=3 SV=1
Length = 175
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 61 EKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWL 120
E +K L RL+Y++++RG LE DL+L + + + +MD +K +L+ + D++ W
Sbjct: 73 EDEKTLRARLIYQTRKRGTLETDLILSTFARDELPNMDFEEMKQFDKLLDEPDWDIFYWS 132
Query: 121 TGQEQPPEAVKTNPVFSALHNKVMN 145
+ PP K P+ L N
Sbjct: 133 VKKRDPPARWKGTPLLEKLQKHAKN 157
>sp|Q10440|SDHF2_SCHPO Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=emi5 PE=3 SV=1
Length = 139
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 10 NVHRILRSSAVANRSSIASASPAASFETLLRPQYRWVSNTTQSLDIDLSNDEKKKRLFNR 69
N+ +LRS+ NR PQ R+ +T L + E + + R
Sbjct: 9 NITTLLRSARCMNRM----------------PQLRF-EHTKGDLKRVNRSYETRDAMLAR 51
Query: 70 LLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPEA 129
L Y+S++RG LE DL+L + ++ I + ++ +L+ + D+ W +G+ + PE
Sbjct: 52 LKYQSRKRGILETDLLLSNFAKDQIDKYPVSLLREYDQLLDEPDWDILYWCSGEREAPEK 111
Query: 130 VKTNPVFSAL 139
K++ VF L
Sbjct: 112 WKSSQVFKEL 121
>sp|Q178L7|SDHF2_AEDAE Succinate dehydrogenase assembly factor 2, mitochondrial OS=Aedes
aegypti GN=AAEL005866 PE=3 SV=1
Length = 161
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 51 QSLDIDLSNDEKKKRL---FNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVD 107
+SL I + ++K + L +RLLY+S++RG LE L+L + +H+ SMD K
Sbjct: 50 KSLPIPIYKEKKNEPLQLQKSRLLYQSRKRGMLENGLLLSTFAAKHLESMDVKQTKLYDQ 109
Query: 108 VLNLENP--DLWKWLTGQEQPPEAVKTNPVFSALHNKVMN 145
++N+ D++ W TG +P A N + + L + V N
Sbjct: 110 LINMPTNDWDIFYWATGV-KPTPAEYDNEIMALLKDHVKN 148
>sp|Q6LMR2|Y3099_PHOPR Uncharacterized protein PBPRA3099 OS=Photobacterium profundum
GN=PBPRA3099 PE=3 SV=1
Length = 88
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 57 LSNDEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDL 116
LS+DE+ + L + +RG LELD+++ + EE + + + + V +L ++PDL
Sbjct: 4 LSSDERAR------LKWACRRGMLELDVIIMPFFEECLDDLPDQEQRDFVSLLTSDDPDL 57
Query: 117 WKWLTGQEQPPEAVKTNPVFSALHNKVMNNLNS 149
+ W+ G + NP +A+ +K++ + NS
Sbjct: 58 FTWMMGHGR-----SENPAHAAMVDKIVAHNNS 85
>sp|Q82SG6|Y2372_NITEU Uncharacterized protein NE2372 OS=Nitrosomonas europaea (strain
ATCC 19718 / NBRC 14298) GN=NE2372 PE=3 SV=1
Length = 77
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
R+ +R + RG LELD+VL ++++ H +DE+ ++ +L+L + DLW + G + P
Sbjct: 6 RMRWRCR-RGMLELDIVLQRFIDNHYEQLDEHQLELFEMLLSLSDHDLWNIIIGNTKEPN 64
Query: 129 AVKTNPVFSAL 139
+ PV L
Sbjct: 65 N-QFQPVLKLL 74
>sp|Q6FQ93|SDHF2_CANGA Succinate dehydrogenase assembly factor 2, mitochondrial OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=EMI5 PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RL+Y+S++RG LE DL+L + +H+ SM + +LN + D++ W+T
Sbjct: 60 RLIYQSRKRGILETDLLLSGFAAKHLRSMTNEELDEYDALLNELDWDIYYWVTKN----- 114
Query: 129 AVKTNPV 135
KT+PV
Sbjct: 115 -YKTSPV 120
>sp|Q87LM9|Y2582_VIBPA Uncharacterized protein VP2582 OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=VP2582 PE=3 SV=1
Length = 86
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 74 SKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQ 123
+ +RG LELD+V+ + EE +++E + V +L ++PDL+ W+ G
Sbjct: 13 ACRRGMLELDVVIMPFFEECFDALNEQEQRDFVSLLECDDPDLFTWVMGH 62
>sp|B4J5U3|SDHF2_DROGR Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Drosophila grimshawi GN=GH20828 PE=3 SV=1
Length = 147
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLN-LENP-DLWKWLTGQEQP 126
RLLY+S++RG LE DL+L + +++ DE+ +++N + N D++ W TG +
Sbjct: 54 RLLYQSRKRGMLENDLLLSTFAHKYLKDFDEDETAIYDELINGVSNDWDIYYWATGVKPT 113
Query: 127 PEAVKTNPVFSALHNKVMNN 146
P +T+ + L V N
Sbjct: 114 PPQYETD-IMELLKQHVKNT 132
>sp|A5DJ67|SDHF2_PICGU Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566
/ DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=EMI5
PE=3 SV=2
Length = 135
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLT 121
RL+Y+S++RG LE DL+L ++ ++H+ S+ ++ + +L+ + D++ W T
Sbjct: 45 RLVYQSRKRGILESDLLLSRFAKKHLDSLSDSQLDEYDQLLDEPDWDIYYWAT 97
>sp|A3KP74|SDHF2_DANRE Succinate dehydrogenase assembly factor 2, mitochondrial OS=Danio
rerio GN=sdhaf2 PE=2 SV=1
Length = 158
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 5 RRAVINVHRI-LRSSA--VANRSSIASASPAASFETLLRPQYRWVSNTTQSLDIDLSNDE 61
R+ V +V R LR + V R A E L P W ++LDI
Sbjct: 8 RKVVCSVCRASLRPTVCPVVYRGYRGDAPEPTILEIPLPP---WQERAGEALDI------ 58
Query: 62 KKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP--DLWKW 119
K+KRL LY S++RG LE ++L + ++++++M E+ +K ++N + D++ W
Sbjct: 59 KRKRL----LYESRKRGMLENCILLSLFAKQYLNTMSESQLKQYDRLINEPSNDWDIYYW 114
Query: 120 LTGQEQPPEAVK 131
T + PE +
Sbjct: 115 ATDTQPTPEVYQ 126
>sp|C4R0B5|SDHF2_PICPG Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Komagataella pastoris (strain GS115 / ATCC 20864)
GN=EMI5 PE=3 SV=1
Length = 190
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQP-- 126
RL+Y+S++RG LE DL+L ++ + ++ +M ++ D+LN + D++ W +
Sbjct: 96 RLVYQSRKRGILETDLLLSRFAKRYLPTMSVEEMEEYDDLLNELDWDIYYWAVKNYEVTP 155
Query: 127 -PEAVKTNPVFSALHNKVMNN 146
PE K + + + L NN
Sbjct: 156 LPEKWKDSKILAKLQEMSANN 176
>sp|B0XK69|SDHF2_CULQU Succinate dehydrogenase assembly factor 2, mitochondrial OS=Culex
quinquefasciatus GN=CPIJ019830 PE=3 SV=1
Length = 159
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 68 NRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP--DLWKWLTGQEQ 125
+RLLY+S++RG LE L+L + +++ S+D K ++N+ D++ W TG +
Sbjct: 68 SRLLYQSRKRGMLENGLLLSTFAAKYLESLDARQTKLYDTLINMPTNDWDIFYWATGVKP 127
Query: 126 PPEAVKTNPVFSALHNKVMN 145
P+ N + + L V N
Sbjct: 128 TPQEYD-NEIMNMLKEHVKN 146
>sp|Q5E305|Y2096_VIBF1 Uncharacterized protein VF_2096 OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=VF_2096 PE=3 SV=1
Length = 86
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 74 SKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQ 123
+ +RG LELD+V+ + +E + E +A V +L ++PDL+ W+ G
Sbjct: 13 ACRRGMLELDVVIMPFFDECFEELTEAEQQAFVSLLECDDPDLFTWVMGH 62
>sp|A6ZND9|SDHF2_YEAS7 Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Saccharomyces cerevisiae (strain YJM789) GN=EMI5 PE=3
SV=1
Length = 162
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RL+Y+S++RG LE DL+L + +++ M+E ++ +LN + D++ W T +
Sbjct: 68 RLIYQSRKRGILETDLLLSGFAAKYLKKMNEEELEEYDSLLNELDWDIYYWAT------K 121
Query: 129 AVKTNPV 135
KT+P+
Sbjct: 122 NFKTSPL 128
>sp|B3LIY9|SDHF2_YEAS1 Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Saccharomyces cerevisiae (strain RM11-1a) GN=EMI5
PE=3 SV=1
Length = 162
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RL+Y+S++RG LE DL+L + +++ M+E ++ +LN + D++ W T +
Sbjct: 68 RLIYQSRKRGILETDLLLSGFAAKYLKKMNEEELEEYDSLLNELDWDIYYWAT------K 121
Query: 129 AVKTNPV 135
KT+P+
Sbjct: 122 NFKTSPL 128
>sp|Q08230|SDHF2_YEAST Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=EMI5 PE=1 SV=1
Length = 162
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RL+Y+S++RG LE DL+L + +++ M+E ++ +LN + D++ W T +
Sbjct: 68 RLIYQSRKRGILETDLLLSGFAAKYLKKMNEEELEEYDSLLNELDWDIYYWAT------K 121
Query: 129 AVKTNPV 135
KT+P+
Sbjct: 122 NFKTSPL 128
>sp|Q608F1|Y1541_METCA Uncharacterized protein MCA1541 OS=Methylococcus capsulatus (strain
ATCC 33009 / NCIMB 11132 / Bath) GN=MCA1541 PE=3 SV=1
Length = 83
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 68 NRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPP 127
RLL+ S +RG ELD VL +V D + +A +L+L++ DLW+ LTG +P
Sbjct: 5 GRLLW-SCRRGMAELDRVLALYVHGAYQEADVSERQAFERLLDLQDADLWRCLTGLARPE 63
Query: 128 E 128
+
Sbjct: 64 D 64
>sp|B4KPG8|SDF2B_DROMO Succinate dehydrogenase assembly factor 2-B, mitochondrial
OS=Drosophila mojavensis GN=GI20928 PE=3 SV=1
Length = 157
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 68 NRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLN-LENP-DLWKWLTGQEQ 125
RL+Y+S++RG LE DL+L + +++ + D++N + N D++ W TG +Q
Sbjct: 61 QRLMYQSRKRGMLENDLLLSTFAHKYLKDFNAEQTALYDDLINGVSNDWDIYYWATGVKQ 120
Query: 126 PPEAVKTNPV-FSALHNKVMNNLNSYASPE 154
P+ T + LH + + PE
Sbjct: 121 TPKEYDTEIMKLLKLHVDNAERVTRFRQPE 150
>sp|Q8DC84|Y1557_VIBVU Uncharacterized protein VV1_1557 OS=Vibrio vulnificus (strain
CMCP6) GN=VV1_1557 PE=3 SV=1
Length = 86
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 76 QRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQ 123
+RG LELD+V+ + EE + E + V +L ++PDL+ W+ G
Sbjct: 15 RRGMLELDVVVMPFFEECFEKLSEQEQRDFVSLLECDDPDLFTWVMGH 62
>sp|B6HRA4|SDHF2_PENCW Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075
/ Wisconsin 54-1255) GN=emi5 PE=3 SV=1
Length = 310
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RLLY+S++RG LE DL+L + + ++ M+ + + L+ + D++ W T Q+ P E
Sbjct: 148 RLLYQSRKRGILESDLLLSTFADVYLGKMNYDQLVEYDSFLDENDWDIYYWAT-QDSPEE 206
Query: 129 AVKTNP 134
+ P
Sbjct: 207 ISPSTP 212
>sp|Q756Q4|SDHF2_ASHGO Succinate dehydrogenase assembly factor 2, mitochondrial OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=EMI5 PE=3 SV=1
Length = 160
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 13 RILRSSAVANRSSIASASPAASFETLLRPQYRWVSNTTQSLDIDLS--------NDEKKK 64
R S A A +A A + +L R S Q D+ L N+E +
Sbjct: 3 RFSFSHAFAGSYGLAPARATRFYPRILPFAARAYSADKQGDDVILRVKVAPIKRNNETLE 62
Query: 65 RLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQE 124
+ RL+Y+S++RG LE DL+L + +++ M + ++LN + D++ W T
Sbjct: 63 QQRARLVYQSRKRGILETDLLLSGFAAKYLKHMTAEELNEYDELLNELDWDIYYWATKNS 122
Query: 125 QP---PEAVKTNPVFSALHNKVMNNLNSYA 151
PE + H+K++ L +Y+
Sbjct: 123 DASPLPEKWQ--------HSKILRKLQAYS 144
>sp|Q0CSY3|SDHF2_ASPTN Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=emi5 PE=3 SV=1
Length = 295
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RLLY+S++RG LE DL+L + + ++ M+ ++ L+ + D++ W T Q+ P E
Sbjct: 152 RLLYQSRKRGILESDLLLSTFADVYLAKMNHEQLQEYDRFLDENDWDIYYWAT-QDAPEE 210
Query: 129 AV 130
Sbjct: 211 GT 212
>sp|B8NT06|SDHF2_ASPFN Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 /
NRRL 3357 / JCM 12722 / SRRC 167) GN=emi5 PE=3 SV=1
Length = 292
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPE 128
RLLY+S++RG LE DL+L + + ++ M++ ++ L+ + D++ W T Q+ P E
Sbjct: 149 RLLYQSRKRGILESDLLLSTFADVYLSKMNKEQLQEYDRFLDENDWDIYYWAT-QDPPTE 207
>sp|B4LKE5|SDHF2_DROVI Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Drosophila virilis GN=GJ20144 PE=3 SV=1
Length = 158
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 68 NRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVL--NLENP-DLWKWLTGQE 124
RLLY+S++RG LE DL+L +V +++ DE+ AL D L + N D++ W T +
Sbjct: 68 QRLLYQSRKRGMLENDLLLSTFVAKYLKDFDEDET-ALYDKLINGVSNDWDIYYWATETK 126
Query: 125 QPPEAVKTNPVFSALHNKVMNN 146
P T+ + L V N
Sbjct: 127 PTPPEYDTD-IMKLLKQHVKNT 147
>sp|Q8PKT3|Y2079_XANAC Uncharacterized protein XAC2079 OS=Xanthomonas axonopodis pv. citri
(strain 306) GN=XAC2079 PE=3 SV=1
Length = 109
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 57 LSNDEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDL 116
+ ++ ++ L +L +R + RG ELD + G+++++ + + +L+ E+ L
Sbjct: 24 VESEMDEQTLLKKLRWRCR-RGMRELDQLFGRYLDQRWAQAPDAERAVFLQLLDCEDDKL 82
Query: 117 WKWLTGQEQPPEAV 130
W+W G E P+A
Sbjct: 83 WRWFMGYEACPDAA 96
>sp|Q7MHM8|Y2841_VIBVY Uncharacterized protein VV2841 OS=Vibrio vulnificus (strain YJ016)
GN=VV2841 PE=3 SV=1
Length = 86
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 76 QRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQ 123
+RG LELD+V+ + EE + E + V +L ++PDL+ W+ G
Sbjct: 15 RRGMLELDVVVMPFFEECFDKLSEQEQRDFVSLLECDDPDLFTWVMGH 62
>sp|Q8C6I2|SDHF2_MOUSE Succinate dehydrogenase assembly factor 2, mitochondrial OS=Mus
musculus GN=Sdhaf2 PE=2 SV=1
Length = 164
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP----DLWKWLTGQE 124
RLLY S++RG LE ++L + +E++H+M E + ++N P D++ W T +
Sbjct: 67 RLLYESRKRGMLENCILLSLFAKEYLHNMTEKQLNLYDRLIN--EPSNDWDIYYWATEAK 124
Query: 125 QPPEAVKTNPVFSALHNKVMNNLNSYA 151
PE N+VM L +A
Sbjct: 125 PAPE---------IFENEVMELLREFA 142
>sp|Q6CND9|SDHF2_KLULA Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=EMI5 PE=3
SV=1
Length = 163
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 46 VSNTTQSLDIDLSNDEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKAL 105
+ T +SLD KKR RL+Y+S++RG LE DL+L ++ +++ M ++
Sbjct: 57 IKRTGESLD--------KKRA--RLIYQSRKRGILETDLLLSRFAAKYLKEMTPEQLEEY 106
Query: 106 VDVLNLENPDLWKWLT 121
+LN + D++ W T
Sbjct: 107 DQLLNELDWDIYYWAT 122
>sp|Q5R4W7|SDHF2_PONAB Succinate dehydrogenase assembly factor 2, mitochondrial OS=Pongo
abelii GN=SDHAF2 PE=2 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 28/157 (17%)
Query: 2 ASLRRAVINVHRILRS--SAVANRSSIASASPAASFETLLR-PQYRWVSNTTQSLDIDLS 58
S R ++ H +L S + R SPA S + L+ P W T +S++
Sbjct: 9 TSSRMLALSRHSLLSPLLSVTSFRCFYRGDSPADSQKDLIEIPLPPWQERTDESIET--- 65
Query: 59 NDEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP---- 114
KR RLLY S++RG LE ++L + +EH+ M E + ++N P
Sbjct: 66 -----KR--ARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLIN--EPSNDW 116
Query: 115 DLWKWLTGQEQPPEAVKTNPVFSALHNKVMNNLNSYA 151
D++ W T + PE + N+VM L +A
Sbjct: 117 DIYYWATEAKPAPEVFE---------NEVMALLRDFA 144
>sp|B4GG58|SDF2B_DROPE Succinate dehydrogenase assembly factor 2-B, mitochondrial
OS=Drosophila persimilis GN=GL17204 PE=3 SV=1
Length = 157
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 57 LSNDEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLN-LENP- 114
L DE + RLLY+S++RG LE DL+L +V +H+ D++N + N
Sbjct: 56 LRPDEPLETRKQRLLYQSRKRGMLENDLLLSTFVAKHLRDFSAAQTAQYDDLINGVSNDW 115
Query: 115 DLWKWLTGQEQPPEAVKTNPVFSALHNKVMNNLNSYASPETRSE 158
D++ W A +T P ++M L + E R +
Sbjct: 116 DIFYW---------ATETKPTPPQYDTEIMRMLKQHVKNEERVQ 150
>sp|Q3ZBC2|SDHF2_BOVIN Succinate dehydrogenase assembly factor 2, mitochondrial OS=Bos
taurus GN=SDHAF2 PE=2 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 28/158 (17%)
Query: 7 AVINVHRIL-RSSAVANRSSIASASPAASFETLLRPQYRWVSNTTQSLDI--------DL 57
AV+ V L R AV+ R + SP+ S T R YR S T D+
Sbjct: 2 AVVAVFPALARMLAVSRRRLV---SPSLSM-TSCRRCYRGDSPTDSQKDMIEIPLPPWQE 57
Query: 58 SNDEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP--- 114
DE + RLLY S++RG LE ++L + +EH+ M E + ++N P
Sbjct: 58 RTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLIN--EPSND 115
Query: 115 -DLWKWLTGQEQPPEAVKTNPVFSALHNKVMNNLNSYA 151
D++ W T + PE N+VM L +A
Sbjct: 116 WDIYYWATEAKPAPE---------IFENEVMTLLRDFA 144
>sp|Q9KPA2|Y2471_VIBCH Uncharacterized protein VC_2471 OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=VC_2471
PE=1 SV=1
Length = 86
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 74 SKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQ 123
+ +RG LELD+V+ + EE S+ E+ V +L ++PDL+ W+ G
Sbjct: 13 ACRRGMLELDVVIMPFFEECFDSLTESEQDDFVALLESDDPDLFAWVMGH 62
>sp|B9W8P6|SDHF2_CANDC Succinate dehydrogenase assembly factor 2, mitochondrial OS=Candida
dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 /
NCPF 3949 / NRRL Y-17841) GN=EMI5 PE=3 SV=1
Length = 155
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLT 121
RLLY+S++RG LE DL+L ++ ++++ +M + +L+ + D++ W T
Sbjct: 56 RLLYQSRKRGILESDLLLSRFADKYLKTMTMEELDEYDKLLDEADWDIYYWAT 108
>sp|Q6C202|SDHF2_YARLI Succinate dehydrogenase assembly factor 2, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=EMI5
PE=3 SV=1
Length = 145
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQ--- 125
RLLY+S++RG LE DL+L ++ + ++ M ++ +L+ + D++ W T +
Sbjct: 55 RLLYQSRKRGILETDLLLSRYAKLYLKDMTREELEEYDKLLDEPDWDIFYWATRNDNIKP 114
Query: 126 PPEAVKTNPVFSALHNKVMNN 146
PE +PV L N
Sbjct: 115 CPERWAKSPVMEKLRELAENK 135
>sp|B1P1W2|SDHF2_ARTSF Succinate dehydrogenase assembly factor 2, mitochondrial OS=Artemia
franciscana PE=2 SV=1
Length = 137
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP--DLWKWLTGQEQP 126
RLLY+S++RG LE L+L + ++ +HSM + ++NL + D++ W G +
Sbjct: 63 RLLYQSRKRGMLENCLLLSTFAKKFLHSMTPLQLDQYDRLINLPSNDWDIYNWSVGVKPT 122
Query: 127 PEAVKT 132
PE +T
Sbjct: 123 PEEFET 128
>sp|B3MI37|SDF2A_DROAN Succinate dehydrogenase assembly factor 2-A, mitochondrial
OS=Drosophila ananassae GN=GF11110 PE=3 SV=1
Length = 156
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 68 NRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLN-LENP-DLWKWLT-GQE 124
RLLY+S++RG LE DL+L +V +++ S + D++N + N D++ W T +
Sbjct: 66 QRLLYQSRKRGMLENDLLLSTFVAKYLKSFTADQTAQYDDLINGVSNDWDIFYWATETKP 125
Query: 125 QPPE 128
PPE
Sbjct: 126 TPPE 129
>sp|Q83D70|Y870_COXBU Uncharacterized protein CBU_0870 OS=Coxiella burnetii (strain RSA
493 / Nine Mile phase I) GN=CBU_0870 PE=3 SV=1
Length = 82
Score = 38.1 bits (87), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 76 QRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQP 126
+RG LELD++L ++ EE S+ +N + +L+ +P L+ WL G P
Sbjct: 15 RRGMLELDILLERFYEEKFRSLTKNEKEIFNQLLDQPDPLLYDWLLGHVTP 65
>sp|Q9NX18|SDHF2_HUMAN Succinate dehydrogenase assembly factor 2, mitochondrial OS=Homo
sapiens GN=SDHAF2 PE=1 SV=1
Length = 166
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP----DLWKWLTGQE 124
RLLY S++RG LE ++L + +EH+ M E + ++N P D++ W T +
Sbjct: 69 RLLYESRKRGMLENCILLSLFAKEHLQHMTEKQLNLYDRLIN--EPSNDWDIYYWATEAK 126
Query: 125 QPPEAVKTNPVFSALHNKVMNNLNSYA 151
PE N+VM L +A
Sbjct: 127 PAPE---------IFENEVMALLRDFA 144
>sp|Q8ZHJ5|Y897_YERPE Putative antitoxin YPO0897/y3282/YP_3594 OS=Yersinia pestis
GN=YPO0897 PE=3 SV=1
Length = 88
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 76 QRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPEA 129
+RG ELD+ + + E S+ +N +A + +L ++PDL+ WL +P ++
Sbjct: 14 RRGMRELDISIMPFFEYEYDSLSDNEKQAFIRLLECDDPDLFNWLMNHGEPQDS 67
>sp|Q666S3|Y3173_YERPS Putative antitoxin YPTB3173 OS=Yersinia pseudotuberculosis serotype
I (strain IP32953) GN=YPTB3173 PE=3 SV=1
Length = 88
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 76 QRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQPPEA 129
+RG ELD+ + + E S+ +N +A + +L ++PDL+ WL +P ++
Sbjct: 14 RRGMRELDISIMPFFEYEYDSLSDNEKQAFIRLLECDDPDLFNWLMNHGEPQDS 67
>sp|Q5RJQ7|SDHF2_RAT Succinate dehydrogenase assembly factor 2, mitochondrial OS=Rattus
norvegicus GN=Sdhaf2 PE=2 SV=1
Length = 164
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 69 RLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENP----DLWKWLTGQE 124
RLLY S++RG LE ++L + +E++H+M E + ++N P D++ W T +
Sbjct: 67 RLLYESRKRGMLENCILLSLFAKEYLHNMTEKQLNLYDRLIN--EPSNDWDIYYWATEAK 124
Query: 125 QPPEAVKTNPVFSALHNKVMNNLNSYA 151
PE N+VM L +
Sbjct: 125 PAPE---------IFENEVMELLREFT 142
>sp|B4KN44|SDF2A_DROMO Succinate dehydrogenase assembly factor 2-A, mitochondrial
OS=Drosophila mojavensis GN=GI20197 PE=3 SV=1
Length = 157
Score = 37.4 bits (85), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 60 DEKKKRLFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLN-LENP-DLW 117
DE + RLLY+S++RG LE DL+L +V +++ D ++N + N D++
Sbjct: 59 DEPLETRKQRLLYQSRKRGMLENDLLLSTFVAKYLKDFDAEETAQYDQLINGVSNDWDIY 118
Query: 118 KWLTGQEQPPEAVKTNPVFSALHNKVMNN 146
W T + P T+ V L V N
Sbjct: 119 YWATNTKPTPPEYDTD-VMKLLKQHVKNT 146
>sp|Q8P8V6|Y2128_XANCP Uncharacterized protein XCC2128 OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=XCC2128 PE=3 SV=1
Length = 86
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 66 LFNRLLYRSKQRGFLELDLVLGKWVEEHIHSMDENGIKALVDVLNLENPDLWKWLTGQEQ 125
L +L +R + RG ELD + G++++ + +L+ E+ LW+W G E
Sbjct: 10 LLKKLRWRCR-RGMRELDQLFGRYLDRRWAQAPAAERAVFLQLLDCEDDKLWRWFMGYEA 68
Query: 126 PPEA 129
P+A
Sbjct: 69 CPDA 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,500,951
Number of Sequences: 539616
Number of extensions: 2885786
Number of successful extensions: 8104
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 8003
Number of HSP's gapped (non-prelim): 131
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 57 (26.6 bits)