BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039263
(492 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03795|YM30_YEAST Uncharacterized membrane protein YMR155W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1
SV=1
Length = 547
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 185/461 (40%), Gaps = 52/461 (11%)
Query: 42 AGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGS 100
AG Y+F Y+ + + S + LSFS +G + +G+L+G++ + +P L IGS
Sbjct: 32 AGTPYLFSFYAPQLLSKCHIPVSASSKLSFSLTIGSSLMGILAGIVVDRSPKLSCL-IGS 90
Query: 101 IMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVK-NFPESRGSV 159
+ F Y ++ L + + L + IG S S A V C NFP+ RG+
Sbjct: 91 MCVFIAYLILNLCYKHEWSSTFLISLSL-VLIGYGSVS--GFYASVKCANTNFPQHRGTA 147
Query: 160 LGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANE 219
GLSG + + L +G+N + + + +L A + L + + I A
Sbjct: 148 GAFPVSLYGLSGMVFSYLCSKLFGENIEHVFI---FLMVACGCMILVGYFSLDIFSNAEG 204
Query: 220 LKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGS----------ASLVLILLFLPI 269
K + +V + +N +Y+GS + L F
Sbjct: 205 DDASIKEWELQKSRETDDNIVPLYENSN-----DYIGSPVRSSSPATYETYALSDNFQET 259
Query: 270 AIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGE 329
+ E + S +P L ++ H + E + AQ ++F
Sbjct: 260 SEFFALE-DRQLSNRPLLSPSSPHTKYDFEDENTSKNTVGENSAQKSMRLHVFQSLKSST 318
Query: 330 ---DYTILQALFSIDMLIIFIATTCGVGGTLTA---IDNLGQIGSSLGYPARSTTTFVSL 383
Y +L L + ++ I+ VG + A L Q+ + T +SL
Sbjct: 319 FIGYYIVLGILQGVGLMYIY-----SVGFMVQAQVSTPPLNQLPINAEKIQSLQVTLLSL 373
Query: 384 VSIWNYLGRVVAGFASEILLKKYKIPR--PLLFTFVLLF---SCVGHPFIAYGIPN---- 434
+S + GR+ +G S+ L+KK+K R ++ +L+F + + H F + P+
Sbjct: 374 LS---FCGRLSSGPISDFLVKKFKAQRLWNIVIASLLVFLASNKISHDFSSIEDPSLRAS 430
Query: 435 ----SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLY 471
++ S I G+ FG + +I+++ FG YSTL+
Sbjct: 431 KSFKNISVCSAIFGYSFGVLFGTFPSIVADRFGTNGYSTLW 471
>sp|Q96TW9|MCH1_HANAN Probable transporter MCH1 OS=Hansenula anomala GN=MCH1 PE=3 SV=1
Length = 489
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 182/452 (40%), Gaps = 85/452 (18%)
Query: 35 SLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNVGV-LSGLINEITPPW 93
SL+ AG+ +F L++ ++ L Y Q +N++ +G + + + G + + P
Sbjct: 35 SLISCLCAGSVLLFALFTPVLQHQLHYTQFQINIIGSFTSIGMYLPLPVLGYLADCHGP- 93
Query: 94 VVLAIGSIMNFF-GYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNF 152
V+L++ S++ F GY LA T W + + + + S AL+TC K +
Sbjct: 94 VLLSVISVLFFSPGY---TLAATVVQNDWSFWYLAISFGLIGCATSALYFTALLTCAKIY 150
Query: 153 PESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVFLRTFRIIK 212
P+S+G + GLS I ++ +L ++ L R F++
Sbjct: 151 PKSKGLTISAPVTCYGLSSLIGSR-------------VLKLSCLQKNGDLDLYRCFKL-- 195
Query: 213 IVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIV 272
+ LY LGL F++V SAS+V
Sbjct: 196 -----------FSFLYFFLGL------------------FDWV-SASVV----------S 215
Query: 273 IKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYT 332
I+ ++ LRK ED + P L P Q + + V P+ +
Sbjct: 216 IERDVLLRKH-----EDGENTPLLT-----DPNQEHENNDDLV---------PNHKSKF- 255
Query: 333 ILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGR 392
L+ + I ++ + +G + I N+G + ++ P + V++ ++++ L R
Sbjct: 256 -LKFIKDISTYVLLFSLLLSIGPSEMYITNMGSLVKAIT-PNSLISDQVAIHAVFSTLSR 313
Query: 393 VVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG--IPNSLYAASVIIGFCFGAQ 450
+ G S+ L+ Y+I R L +++ FIA + + Y S + GF +G
Sbjct: 314 LSLGALSDFLVTNYQISRSWLLLSIIVLGFFTQIFIATSTFVKDQYYIISALSGFSYGGL 373
Query: 451 WPLLFAIISEIFGLKYYSTLYNFGAVASPVGA 482
+ L +I I+G + + + + +A +G+
Sbjct: 374 FTLYPTVIFSIWGPEIFGSAWGSFMIAPAIGS 405
>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=MCH1 PE=3 SV=1
Length = 486
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 328 GEDYTILQALFSIDMLIIFIATTCGVGGTLTAI-DNLGQIGSSL---GYPARSTTTFVSL 383
G + L+ F+ +F+ +GG +N+G I ++ + S +T VSL
Sbjct: 259 GHEGATLKEFFTDKTAWLFLLCFVFIGGPFEMFQNNMGAILDTVTVENADSPSFSTHVSL 318
Query: 384 VSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI----PNSLYAA 439
+ ++ + R+V GF+SE + + + RP+L + + L + H + GI N+ Y +
Sbjct: 319 FATFSTVSRLVVGFSSEAM--ESHVSRPVLLSVIALVAACIHLMVPSGIFTVFDNAKYFS 376
Query: 440 SVII--GFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGA 482
V I GF +G+ + L+ I+++++G+ T++ +A VG+
Sbjct: 377 VVTIVNGFSYGSSFTLVPTIVTKVWGIANLGTIWGSFILALAVGS 421
>sp|P37662|YHJX_ECOLI Inner membrane protein YhjX OS=Escherichia coli (strain K12)
GN=yhjX PE=1 SV=1
Length = 402
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 329 EDYTILQALFSID--MLIIFIATTCGVGGTLTAIDNLGQIGSSLGY-PARSTTTFVSLVS 385
+DYT+ +++ ML + T C G L I I SL + S V+++S
Sbjct: 203 KDYTLAESMRKPQYWMLAVMFLTACMSG--LYVIGVAKDIAQSLAHLDVVSAANAVTVIS 260
Query: 386 IWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSL--YAASVII 443
I N GR+V G S+ KI R + T + S VG + + N++ +AA +
Sbjct: 261 IANLSGRLVLGILSD------KIARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACV 314
Query: 444 GFCFGAQWPLLFAIISEIFGL----KYYSTLY 471
F FG + +++SE FGL K Y +Y
Sbjct: 315 AFNFGGTITVFPSLVSEFFGLNNLAKNYGVIY 346
>sp|Q08777|MCH5_YEAST Riboflavin transporter MCH5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MCH5 PE=1 SV=2
Length = 521
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 358 TAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFV 417
+A+ G +S G A T + ++++ GR V G+ S+ + LL F+
Sbjct: 348 SALTYYGSYATSHGISANDAYTLIMIINVCGIPGRWVPGYLSDKFGRFNVAIATLLTLFI 407
Query: 418 LLFSCVGHPFIAYGIP-NSLYAASVIIGFCFGAQWPLLFAIISEI-----FGLKYYSTLY 471
++F VG ++ +G ++Y S + GFC G+ + LL +I FG K YST+Y
Sbjct: 408 VMF--VG--WLPFGTNLTNMYVISALYGFCSGSVFSLLPVCCGQISKTEEFG-KRYSTMY 462
Query: 472 ---NFGA-VASPVGAYILNVKVAGQ 492
FG V P+ I+++K
Sbjct: 463 FVVGFGTLVGIPITGAIISIKTTAD 487
>sp|Q7RTY0|MOT13_HUMAN Monocarboxylate transporter 13 OS=Homo sapiens GN=SLC16A13 PE=2
SV=1
Length = 426
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 381 VSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI---PNSLY 437
+S+V+I + +GRVV+G+ + +P P+ +L + G + + P +L
Sbjct: 255 LSVVAISDLVGRVVSGWLGD------AVPGPVTRLLMLWTTLTGVSLALFPVAQAPTALV 308
Query: 438 AASVIIGFCFGAQWPLLFAIISEIFGLK 465
A +V GF GA PL F+++ E+ G +
Sbjct: 309 ALAVAYGFTSGALAPLAFSVLPELIGTR 336
>sp|O31569|YFHA_BACSU Probable siderophore transport system permease protein YfhA
OS=Bacillus subtilis (strain 168) GN=yfhA PE=1 SV=1
Length = 343
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 27/123 (21%)
Query: 83 SGLINEITPPWVVLAIGSIMNFFGY------FMIWLAVTGRIPKPQVWQMCLYICIGANS 136
+GL PPW V FFG MI ++ R+P+ + +C +C+ A
Sbjct: 33 AGLGQRFIPPWDVAK-----TFFGAGSKLDELMI---MSFRMPR-ILTALCAGVCLAA-- 81
Query: 137 QSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWL 196
GA++ + P + ++G+ G A+ L F+ D S +L + ++WL
Sbjct: 82 -----AGAILQGLVRNPLASPDIIGITGG-----AAVAVVLLMMFFSDRSSSLTISLSWL 131
Query: 197 PAA 199
PAA
Sbjct: 132 PAA 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,077,195
Number of Sequences: 539616
Number of extensions: 7165176
Number of successful extensions: 20879
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 20857
Number of HSP's gapped (non-prelim): 50
length of query: 492
length of database: 191,569,459
effective HSP length: 122
effective length of query: 370
effective length of database: 125,736,307
effective search space: 46522433590
effective search space used: 46522433590
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)