Query 039263
Match_columns 492
No_of_seqs 108 out of 654
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 07:57:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039263.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039263hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 4.1E-71 8.9E-76 599.1 30.3 452 25-492 23-510 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 4.4E-54 9.5E-59 420.7 21.8 245 28-272 1-249 (250)
3 TIGR00890 2A0111 Oxalate/Forma 99.9 7.6E-25 1.6E-29 223.0 16.9 339 27-481 1-343 (377)
4 KOG2504 Monocarboxylate transp 99.9 3.1E-23 6.6E-28 223.4 16.5 384 27-483 43-438 (509)
5 PLN00028 nitrate transmembrane 99.8 5.2E-19 1.1E-23 189.8 16.1 358 28-487 35-401 (476)
6 PRK11663 regulatory protein Uh 99.8 1.3E-18 2.9E-23 184.0 17.8 155 14-176 8-165 (434)
7 TIGR00892 2A0113 monocarboxyla 99.8 2.5E-18 5.4E-23 183.4 19.7 363 26-481 15-381 (455)
8 PRK09556 uhpT sugar phosphate 99.8 3.9E-18 8.6E-23 182.2 19.8 360 26-475 25-391 (467)
9 PRK11551 putative 3-hydroxyphe 99.8 4.3E-18 9.3E-23 177.4 19.4 340 23-476 8-351 (406)
10 TIGR00881 2A0104 phosphoglycer 99.8 7.7E-18 1.7E-22 171.5 17.3 338 45-477 11-354 (379)
11 TIGR00893 2A0114 d-galactonate 99.8 3.3E-18 7.2E-23 174.3 13.7 345 45-481 10-359 (399)
12 PRK09705 cynX putative cyanate 99.8 2.7E-17 5.9E-22 171.8 19.2 318 35-474 14-334 (393)
13 TIGR00895 2A0115 benzoate tran 99.7 2.6E-17 5.6E-22 169.0 16.1 366 25-481 12-386 (398)
14 PRK11273 glpT sn-glycerol-3-ph 99.7 4.6E-17 1E-21 173.2 18.0 147 26-176 25-174 (452)
15 PRK03699 putative transporter; 99.7 1.4E-16 3E-21 166.2 19.4 339 25-485 2-349 (394)
16 TIGR00891 2A0112 putative sial 99.7 1.6E-16 3.5E-21 163.9 18.7 148 23-177 5-155 (405)
17 PRK12307 putative sialic acid 99.7 2.1E-16 4.5E-21 165.8 19.0 350 27-485 15-377 (426)
18 TIGR00712 glpT glycerol-3-phos 99.7 1.8E-16 3.9E-21 167.9 17.7 148 26-177 23-173 (438)
19 TIGR02332 HpaX 4-hydroxyphenyl 99.7 1.3E-16 2.9E-21 167.8 16.3 143 27-176 5-150 (412)
20 TIGR00896 CynX cyanate transpo 99.7 4.3E-16 9.2E-21 159.8 18.2 309 46-474 17-327 (355)
21 PRK03545 putative arabinose tr 99.7 6.7E-16 1.5E-20 160.6 19.8 336 26-486 5-350 (390)
22 TIGR00886 2A0108 nitrite extru 99.7 2.2E-16 4.9E-21 161.5 15.5 124 42-172 14-140 (366)
23 TIGR00897 2A0118 polyol permea 99.6 8.2E-15 1.8E-19 153.4 19.8 340 26-476 13-357 (402)
24 TIGR00894 2A0114euk Na(+)-depe 99.6 1E-14 2.3E-19 155.3 17.8 335 58-486 70-413 (465)
25 TIGR00710 efflux_Bcr_CflA drug 99.6 2E-14 4.4E-19 147.7 18.1 327 27-473 4-339 (385)
26 PF07690 MFS_1: Major Facilita 99.6 1.6E-16 3.5E-21 160.6 2.3 329 48-483 15-349 (352)
27 PRK15034 nitrate/nitrite trans 99.6 1.6E-14 3.5E-19 153.7 17.4 142 30-174 34-179 (462)
28 TIGR00900 2A0121 H+ Antiporter 99.6 6.1E-15 1.3E-19 149.6 12.6 331 32-474 5-342 (365)
29 TIGR00898 2A0119 cation transp 99.6 1.5E-14 3.2E-19 155.6 16.1 346 43-481 103-458 (505)
30 TIGR00903 2A0129 major facilit 99.6 4.3E-14 9.2E-19 147.0 18.7 314 45-476 7-323 (368)
31 TIGR00711 efflux_EmrB drug res 99.6 4.3E-14 9.4E-19 150.4 18.3 373 47-487 20-406 (485)
32 PRK05122 major facilitator sup 99.6 1.9E-13 4.2E-18 142.2 21.0 127 44-170 31-160 (399)
33 TIGR00879 SP MFS transporter, 99.6 3.8E-14 8.2E-19 148.6 15.4 149 26-178 21-183 (481)
34 PRK03893 putative sialic acid 99.6 4E-13 8.7E-18 143.9 23.5 155 22-183 12-169 (496)
35 PRK10213 nepI ribonucleoside t 99.6 1.8E-13 3.9E-18 143.3 19.8 143 25-174 15-160 (394)
36 TIGR00885 fucP L-fucose:H+ sym 99.5 1.4E-13 3.1E-18 145.1 17.7 336 37-466 10-354 (410)
37 cd06174 MFS The Major Facilita 99.5 1.6E-13 3.6E-18 137.7 16.7 295 45-481 15-313 (352)
38 PRK14995 methyl viologen resis 99.5 5.4E-13 1.2E-17 143.9 20.4 378 27-473 3-391 (495)
39 COG2223 NarK Nitrate/nitrite t 99.5 2.4E-13 5.1E-18 140.1 16.3 320 45-484 30-364 (417)
40 PRK03633 putative MFS family t 99.5 2.4E-13 5.1E-18 141.2 16.1 295 47-469 24-321 (381)
41 PRK12382 putative transporter; 99.5 7.7E-13 1.7E-17 137.5 19.8 126 45-170 32-160 (392)
42 PRK10091 MFS transport protein 99.5 4.9E-13 1.1E-17 138.9 18.2 122 46-174 20-143 (382)
43 PRK10504 putative transporter; 99.5 1.5E-12 3.2E-17 138.8 21.7 361 44-474 25-394 (471)
44 PRK10473 multidrug efflux syst 99.5 8.7E-13 1.9E-17 137.1 18.3 137 27-171 2-140 (392)
45 PRK09528 lacY galactoside perm 99.5 7.3E-13 1.6E-17 139.3 16.6 336 26-473 10-355 (420)
46 PRK11043 putative transporter; 99.5 7.4E-13 1.6E-17 138.0 16.5 138 28-172 5-144 (401)
47 PRK10133 L-fucose transporter; 99.5 3E-12 6.6E-17 136.1 21.5 354 26-468 22-381 (438)
48 PRK15402 multidrug efflux syst 99.5 9.1E-13 2E-17 137.7 17.1 140 24-170 7-149 (406)
49 TIGR00883 2A0106 metabolite-pr 99.5 1.1E-12 2.5E-17 134.1 16.8 325 45-473 9-352 (394)
50 PRK15075 citrate-proton sympor 99.5 1.9E-12 4.2E-17 137.0 18.1 139 25-170 10-165 (434)
51 TIGR01299 synapt_SV2 synaptic 99.4 1.1E-12 2.3E-17 147.3 15.6 146 26-178 163-311 (742)
52 PRK10406 alpha-ketoglutarate t 99.4 1.9E-12 4.2E-17 136.9 16.7 139 25-164 17-166 (432)
53 PRK10642 proline/glycine betai 99.4 2.3E-12 4.9E-17 138.8 17.3 133 30-167 16-163 (490)
54 COG2271 UhpC Sugar phosphate p 99.4 3.8E-12 8.3E-17 131.3 16.7 126 46-178 46-173 (448)
55 TIGR00887 2A0109 phosphate:H+ 99.4 9E-12 1.9E-16 134.5 19.8 143 30-173 16-166 (502)
56 PRK11652 emrD multidrug resist 99.4 1.3E-11 2.7E-16 128.5 19.0 135 24-166 4-140 (394)
57 PRK10077 xylE D-xylose transpo 99.4 1.1E-11 2.4E-16 132.1 18.8 122 53-174 36-172 (479)
58 TIGR00899 2A0120 sugar efflux 99.4 1.2E-11 2.6E-16 126.8 18.0 145 334-485 193-343 (375)
59 PRK11646 multidrug resistance 99.4 1.1E-11 2.3E-16 130.1 17.9 141 25-174 9-151 (400)
60 PRK10489 enterobactin exporter 99.4 2E-12 4.3E-17 135.8 12.3 340 31-486 22-369 (417)
61 PRK10054 putative transporter; 99.4 4E-12 8.8E-17 133.1 14.1 127 41-174 20-148 (395)
62 PRK09952 shikimate transporter 99.4 1.4E-11 3.1E-16 130.8 18.3 143 26-174 18-177 (438)
63 PRK09874 drug efflux system pr 99.4 3.1E-11 6.7E-16 125.5 19.3 119 47-173 32-157 (408)
64 TIGR00901 2A0125 AmpG-related 99.4 7.7E-12 1.7E-16 128.2 14.3 320 51-476 10-352 (356)
65 PRK11102 bicyclomycin/multidru 99.4 1.2E-11 2.5E-16 127.4 15.2 122 46-174 8-131 (377)
66 TIGR00889 2A0110 nucleoside tr 99.3 4.6E-11 9.9E-16 126.3 16.1 138 332-475 200-350 (418)
67 PRK08633 2-acyl-glycerophospho 99.3 7.9E-11 1.7E-15 138.8 18.2 329 49-476 30-365 (1146)
68 KOG2532 Permease of the major 99.3 5E-11 1.1E-15 127.5 14.7 301 56-451 65-380 (466)
69 TIGR00882 2A0105 oligosacchari 99.2 3E-10 6.5E-15 118.4 18.6 135 332-473 207-347 (396)
70 PRK06814 acylglycerophosphoeth 99.2 2.7E-10 5.8E-15 134.7 16.1 139 332-476 217-377 (1140)
71 TIGR00902 2A0127 phenyl propri 99.2 1.1E-09 2.5E-14 113.8 18.4 134 332-472 197-331 (382)
72 PRK11128 putative 3-phenylprop 99.1 2.1E-09 4.5E-14 111.7 17.5 136 332-474 197-333 (382)
73 PRK15011 sugar efflux transpor 99.1 4.6E-09 1E-13 109.7 19.7 99 368-473 245-344 (393)
74 TIGR00792 gph sugar (Glycoside 99.1 1.6E-09 3.5E-14 113.9 15.1 135 332-474 214-359 (437)
75 COG0738 FucP Fucose permease [ 99.1 1.3E-08 2.8E-13 105.0 20.8 328 49-477 33-367 (422)
76 PRK11010 ampG muropeptide tran 99.1 3.1E-09 6.6E-14 114.8 16.7 118 52-174 35-159 (491)
77 PRK11195 lysophospholipid tran 99.1 3.6E-09 7.8E-14 110.8 16.0 129 28-168 4-134 (393)
78 PRK11902 ampG muropeptide tran 99.0 2.4E-09 5.3E-14 112.0 14.5 116 53-174 24-146 (402)
79 KOG2563 Permease of the major 99.0 8.1E-09 1.8E-13 107.6 15.3 141 22-164 37-182 (480)
80 PRK15403 multidrug efflux syst 98.9 1.4E-08 3.1E-13 107.0 15.5 122 45-173 32-155 (413)
81 TIGR00805 oat sodium-independe 98.9 1.1E-09 2.5E-14 121.7 7.1 126 47-172 51-222 (633)
82 PF13347 MFS_2: MFS/sugar tran 98.9 2.3E-08 5E-13 105.7 13.7 318 52-474 25-363 (428)
83 PRK09584 tppB putative tripept 98.9 3.2E-07 7E-12 99.4 22.2 128 45-178 37-170 (500)
84 COG2814 AraJ Arabinose efflux 98.8 8.4E-07 1.8E-11 92.5 21.7 337 27-486 10-356 (394)
85 KOG0569 Permease of the major 98.8 3.5E-07 7.6E-12 97.9 18.7 333 52-469 42-404 (485)
86 TIGR00806 rfc RFC reduced fola 98.8 2.2E-07 4.8E-12 98.7 16.3 127 42-176 39-168 (511)
87 PRK09669 putative symporter Ya 98.7 1.4E-07 3E-12 100.2 14.4 136 332-474 221-367 (444)
88 TIGR00924 yjdL_sub1_fam amino 98.7 2.3E-06 5.1E-11 92.1 22.6 126 48-180 30-163 (475)
89 PRK10207 dipeptide/tripeptide 98.7 2.7E-06 5.9E-11 92.0 23.0 139 29-173 13-158 (489)
90 KOG2533 Permease of the major 98.7 2.2E-07 4.8E-12 100.2 12.9 327 55-474 72-403 (495)
91 TIGR02718 sider_RhtX_FptX side 98.6 1.7E-06 3.6E-11 90.1 17.2 137 332-474 200-345 (390)
92 PRK09848 glucuronide transport 98.6 8.3E-07 1.8E-11 94.3 14.8 149 332-487 220-384 (448)
93 PRK10429 melibiose:sodium symp 98.6 7.5E-07 1.6E-11 95.7 14.6 134 334-474 225-372 (473)
94 PF00083 Sugar_tr: Sugar (and 98.4 1.4E-09 3.1E-14 115.0 -11.0 103 65-172 47-152 (451)
95 TIGR01272 gluP glucose/galacto 98.4 6.1E-06 1.3E-10 83.9 14.2 133 335-474 135-270 (310)
96 COG2807 CynX Cyanate permease 98.3 2.5E-05 5.3E-10 80.0 17.7 316 29-465 11-328 (395)
97 TIGR00710 efflux_Bcr_CflA drug 98.3 5.4E-06 1.2E-10 85.1 11.2 134 44-179 221-356 (385)
98 KOG0254 Predicted transporter 98.1 6.5E-05 1.4E-09 81.6 16.8 322 65-473 90-435 (513)
99 PRK15462 dipeptide/tripeptide 98.1 0.0002 4.4E-09 77.5 20.3 132 44-182 24-161 (493)
100 TIGR00788 fbt folate/biopterin 98.1 9.5E-05 2.1E-09 79.6 17.6 123 40-168 36-165 (468)
101 TIGR01299 synapt_SV2 synaptic 98.1 4.2E-06 9.1E-11 94.6 7.4 144 335-484 158-306 (742)
102 KOG0255 Synaptic vesicle trans 98.1 0.00015 3.3E-09 78.7 18.0 119 48-174 101-222 (521)
103 PRK15011 sugar efflux transpor 98.1 2.8E-05 6E-10 81.2 11.4 126 45-177 232-359 (393)
104 PF06609 TRI12: Fungal trichot 98.0 0.0004 8.7E-09 76.5 20.5 130 25-163 38-171 (599)
105 KOG3764 Vesicular amine transp 98.0 2.3E-05 4.9E-10 81.0 10.1 109 55-170 95-208 (464)
106 PRK11462 putative transporter; 98.0 0.00014 3.1E-09 78.0 16.8 108 57-166 38-154 (460)
107 cd06174 MFS The Major Facilita 98.0 1.8E-05 3.9E-10 79.2 9.3 133 44-183 190-326 (352)
108 PRK10642 proline/glycine betai 98.0 3.4E-05 7.5E-10 83.2 10.6 132 42-177 263-397 (490)
109 TIGR00899 2A0120 sugar efflux 98.0 4.9E-05 1.1E-09 77.7 10.9 119 53-178 224-343 (375)
110 TIGR00902 2A0127 phenyl propri 98.0 4.2E-05 9E-10 79.6 10.3 144 29-183 208-354 (382)
111 PRK10213 nepI ribonucleoside t 97.9 9.2E-06 2E-10 85.1 5.3 113 358-476 38-151 (394)
112 TIGR00897 2A0118 polyol permea 97.9 5.8E-05 1.3E-09 79.0 11.1 137 44-183 237-375 (402)
113 PRK11551 putative 3-hydroxyphe 97.9 4.7E-05 1E-09 79.3 10.1 132 45-183 236-369 (406)
114 PRK10406 alpha-ketoglutarate t 97.9 6.3E-05 1.4E-09 79.6 11.1 120 44-166 258-380 (432)
115 TIGR01301 GPH_sucrose GPH fami 97.9 0.00066 1.4E-08 73.2 18.9 133 40-174 12-168 (477)
116 TIGR00879 SP MFS transporter, 97.9 3.8E-05 8.3E-10 80.4 9.2 138 45-183 300-444 (481)
117 PRK15402 multidrug efflux syst 97.8 0.00011 2.4E-09 76.7 11.5 140 45-186 231-372 (406)
118 TIGR00883 2A0106 metabolite-pr 97.8 9.2E-05 2E-09 75.6 10.4 120 41-164 231-354 (394)
119 PRK09528 lacY galactoside perm 97.8 8.8E-05 1.9E-09 78.0 10.2 155 48-209 246-404 (420)
120 PRK03545 putative arabinose tr 97.8 0.00011 2.5E-09 76.3 11.0 115 52-173 229-344 (390)
121 PRK09556 uhpT sugar phosphate 97.8 6.6E-05 1.4E-09 80.4 9.2 115 363-483 52-172 (467)
122 TIGR00711 efflux_EmrB drug res 97.8 3.4E-05 7.4E-10 82.1 6.5 126 55-183 282-409 (485)
123 PRK11043 putative transporter; 97.8 0.00022 4.7E-09 74.3 12.4 141 41-183 215-356 (401)
124 PRK10489 enterobactin exporter 97.8 9.2E-05 2E-09 77.7 9.6 148 50-204 244-395 (417)
125 TIGR00890 2A0111 Oxalate/Forma 97.8 9.2E-05 2E-09 75.1 9.2 127 51-182 227-355 (377)
126 PRK10504 putative transporter; 97.8 2.9E-05 6.2E-10 82.8 5.4 132 339-476 9-141 (471)
127 KOG0253 Synaptic vesicle trans 97.7 0.0018 4E-08 66.7 17.4 163 30-202 79-244 (528)
128 TIGR00886 2A0108 nitrite extru 97.7 5.6E-05 1.2E-09 77.2 6.8 128 341-475 2-132 (366)
129 TIGR00889 2A0110 nucleoside tr 97.7 7.2E-05 1.6E-09 79.2 7.7 147 30-182 212-369 (418)
130 PRK03633 putative MFS family t 97.7 5.3E-05 1.1E-09 78.6 6.6 143 338-486 4-151 (381)
131 TIGR02718 sider_RhtX_FptX side 97.7 0.00017 3.8E-09 74.9 10.2 150 29-182 211-364 (390)
132 TIGR00880 2_A_01_02 Multidrug 97.7 0.00017 3.7E-09 62.0 8.4 97 79-182 14-111 (141)
133 PRK14995 methyl viologen resis 97.7 0.00011 2.3E-09 79.5 8.5 132 46-181 276-410 (495)
134 PRK10077 xylE D-xylose transpo 97.7 0.0003 6.4E-09 75.0 11.8 129 48-179 290-421 (479)
135 PRK11102 bicyclomycin/multidru 97.7 0.00033 7.2E-09 72.0 11.5 145 45-194 210-358 (377)
136 PRK10091 MFS transport protein 97.7 6.5E-05 1.4E-09 78.1 6.3 132 340-477 3-135 (382)
137 PRK15075 citrate-proton sympor 97.7 0.00029 6.2E-09 74.6 11.3 118 44-165 253-374 (434)
138 PF03825 Nuc_H_symport: Nucleo 97.7 0.0024 5.3E-08 67.4 18.0 135 332-473 199-341 (400)
139 PRK11128 putative 3-phenylprop 97.7 0.00023 5E-09 73.9 10.0 126 29-164 208-334 (382)
140 TIGR00893 2A0114 d-galactonate 97.6 0.00019 4E-09 72.9 9.0 134 47-183 233-372 (399)
141 PF11700 ATG22: Vacuole efflux 97.6 0.0024 5.1E-08 69.1 17.7 152 331-486 272-437 (477)
142 COG2270 Permeases of the major 97.6 0.00077 1.7E-08 70.5 13.1 114 369-487 282-399 (438)
143 TIGR00891 2A0112 putative sial 97.6 0.00014 2.9E-09 75.0 7.7 117 362-484 34-151 (405)
144 PF07690 MFS_1: Major Facilita 97.6 6E-05 1.3E-09 75.9 4.8 114 365-484 22-136 (352)
145 PRK03699 putative transporter; 97.6 8.5E-05 1.8E-09 77.5 5.8 129 340-474 7-136 (394)
146 PRK15403 multidrug efflux syst 97.6 9.8E-05 2.1E-09 77.9 6.3 114 355-474 31-145 (413)
147 KOG1330 Sugar transporter/spin 97.6 0.00014 3E-09 76.7 7.1 130 26-162 29-161 (493)
148 TIGR00901 2A0125 AmpG-related 97.6 0.0001 2.2E-09 75.4 6.2 116 51-167 232-354 (356)
149 PRK11663 regulatory protein Uh 97.6 7.7E-05 1.7E-09 79.1 5.1 136 340-481 23-159 (434)
150 TIGR00892 2A0113 monocarboxyla 97.6 0.00038 8.1E-09 74.5 10.4 121 51-176 263-387 (455)
151 TIGR00924 yjdL_sub1_fam amino 97.5 0.00017 3.7E-09 77.7 7.4 138 341-484 11-160 (475)
152 PRK15034 nitrate/nitrite trans 97.5 0.00032 6.8E-09 75.3 9.0 122 73-195 296-442 (462)
153 TIGR00900 2A0121 H+ Antiporter 97.5 5.5E-05 1.2E-09 76.5 2.9 134 342-481 1-140 (365)
154 PRK11010 ampG muropeptide tran 97.5 0.00037 8E-09 75.5 9.4 149 27-180 223-374 (491)
155 TIGR02332 HpaX 4-hydroxyphenyl 97.5 0.00022 4.7E-09 75.2 7.0 111 366-482 34-145 (412)
156 TIGR00881 2A0104 phosphoglycer 97.5 0.00015 3.3E-09 73.6 5.6 113 364-482 19-132 (379)
157 PRK03893 putative sialic acid 97.5 0.00012 2.6E-09 78.4 5.1 131 341-477 21-152 (496)
158 PRK11195 lysophospholipid tran 97.4 0.00011 2.4E-09 76.9 4.2 129 339-475 2-130 (393)
159 PRK12382 putative transporter; 97.4 0.00023 5E-09 73.9 6.5 134 337-476 12-155 (392)
160 PF05977 MFS_3: Transmembrane 97.4 0.003 6.5E-08 69.1 15.3 93 61-156 42-136 (524)
161 PRK09584 tppB putative tripept 97.4 0.00031 6.8E-09 76.2 7.6 126 334-465 14-144 (500)
162 PRK09952 shikimate transporter 97.4 0.0011 2.4E-08 70.4 11.4 131 45-178 266-400 (438)
163 TIGR00712 glpT glycerol-3-phos 97.4 0.00028 6.1E-09 74.8 6.5 111 365-481 51-166 (438)
164 PRK12307 putative sialic acid 97.4 0.00028 6.2E-09 73.9 6.4 116 362-483 40-156 (426)
165 PRK11652 emrD multidrug resist 97.4 0.00032 6.9E-09 72.9 6.7 130 343-478 11-141 (394)
166 KOG4686 Predicted sugar transp 97.4 0.0011 2.4E-08 66.0 9.9 126 339-475 263-394 (459)
167 PRK10054 putative transporter; 97.4 0.00018 3.9E-09 75.4 4.8 129 340-474 7-137 (395)
168 TIGR00882 2A0105 oligosacchari 97.3 0.00093 2E-08 69.6 9.4 136 60-202 250-389 (396)
169 TIGR00895 2A0115 benzoate tran 97.3 0.00049 1.1E-08 70.4 7.2 113 363-481 40-153 (398)
170 PRK15462 dipeptide/tripeptide 97.3 0.00034 7.5E-09 75.7 6.0 114 368-487 38-160 (493)
171 PRK11273 glpT sn-glycerol-3-ph 97.2 0.00052 1.1E-08 73.1 6.7 110 365-481 54-168 (452)
172 PRK11902 ampG muropeptide tran 97.2 0.0013 2.7E-08 68.9 8.6 122 51-178 232-359 (402)
173 PRK08633 2-acyl-glycerophospho 97.2 0.0015 3.3E-08 77.4 10.1 119 49-174 253-374 (1146)
174 PRK09874 drug efflux system pr 97.2 0.0013 2.8E-08 68.2 8.4 130 339-475 13-148 (408)
175 PRK06814 acylglycerophosphoeth 97.1 0.0027 5.9E-08 75.6 11.7 151 29-181 228-393 (1140)
176 PLN00028 nitrate transmembrane 97.1 0.0013 2.7E-08 70.9 8.0 115 363-484 59-178 (476)
177 KOG0252 Inorganic phosphate tr 97.1 0.015 3.3E-07 61.6 15.0 121 61-182 81-207 (538)
178 PRK10473 multidrug efflux syst 97.0 0.00069 1.5E-08 70.3 5.1 111 358-474 21-132 (392)
179 TIGR00896 CynX cyanate transpo 97.0 0.001 2.3E-08 68.0 6.3 108 363-477 23-130 (355)
180 COG2223 NarK Nitrate/nitrite t 97.0 0.0013 2.7E-08 68.8 6.8 136 43-182 232-373 (417)
181 PRK11646 multidrug resistance 97.0 0.00088 1.9E-08 70.3 5.6 128 340-474 11-140 (400)
182 PRK09705 cynX putative cyanate 97.0 0.0026 5.6E-08 66.5 9.0 128 341-475 7-138 (393)
183 PRK05122 major facilitator sup 96.9 0.0014 3E-08 68.1 6.4 121 348-474 24-153 (399)
184 PTZ00207 hypothetical protein; 96.9 0.00092 2E-08 73.8 5.2 138 342-487 27-173 (591)
185 TIGR01272 gluP glucose/galacto 96.9 0.0028 6.1E-08 64.4 8.3 118 52-178 164-284 (310)
186 PRK10133 L-fucose transporter; 96.9 0.0018 3.8E-08 69.1 6.3 137 341-484 27-172 (438)
187 TIGR00898 2A0119 cation transp 96.8 0.0011 2.3E-08 71.4 4.5 116 363-484 112-231 (505)
188 PF03209 PUCC: PUCC protein; 96.8 0.11 2.4E-06 54.5 18.6 134 332-473 200-341 (403)
189 PRK10207 dipeptide/tripeptide 96.8 0.0028 6E-08 68.7 7.0 109 367-481 42-155 (489)
190 TIGR00792 gph sugar (Glycoside 96.7 0.0052 1.1E-07 64.5 8.7 105 63-173 256-369 (437)
191 TIGR00880 2_A_01_02 Multidrug 96.7 0.0021 4.5E-08 55.1 4.6 95 381-481 4-99 (141)
192 PF01306 LacY_symp: LacY proto 96.7 0.027 5.9E-07 59.5 13.5 65 47-111 26-93 (412)
193 TIGR00887 2A0109 phosphate:H+ 96.6 0.0027 5.8E-08 68.7 5.7 101 376-482 57-164 (502)
194 COG2211 MelB Na+/melibiose sym 96.6 0.065 1.4E-06 57.5 15.6 115 57-174 41-165 (467)
195 PRK09848 glucuronide transport 96.4 0.0091 2E-07 63.4 8.2 104 56-164 256-368 (448)
196 TIGR00903 2A0129 major facilit 96.4 0.0042 9.2E-08 64.7 5.4 115 363-484 14-129 (368)
197 PF03825 Nuc_H_symport: Nucleo 96.4 0.024 5.3E-07 59.9 10.8 151 26-183 206-363 (400)
198 COG3104 PTR2 Dipeptide/tripept 96.3 0.018 3.9E-07 61.6 9.1 126 334-467 23-151 (498)
199 PF05977 MFS_3: Transmembrane 96.2 0.025 5.3E-07 62.0 9.8 140 32-180 224-369 (524)
200 COG2814 AraJ Arabinose efflux 96.1 0.013 2.8E-07 61.5 7.0 132 340-477 13-145 (394)
201 TIGR00894 2A0114euk Na(+)-depe 95.9 0.011 2.4E-07 63.0 5.8 106 370-481 71-179 (465)
202 TIGR00805 oat sodium-independe 95.9 0.0026 5.6E-08 71.2 0.6 108 363-476 56-215 (633)
203 PF06609 TRI12: Fungal trichot 95.9 0.016 3.5E-07 64.0 6.8 125 337-469 37-166 (599)
204 COG2270 Permeases of the major 95.8 0.029 6.3E-07 59.0 7.9 100 56-162 280-381 (438)
205 PF13347 MFS_2: MFS/sugar tran 95.6 0.065 1.4E-06 56.6 10.1 143 27-177 225-381 (428)
206 TIGR00885 fucP L-fucose:H+ sym 95.6 0.015 3.3E-07 61.3 5.3 117 364-486 27-151 (410)
207 KOG0569 Permease of the major 95.6 0.083 1.8E-06 57.1 10.8 166 44-214 285-457 (485)
208 KOG0254 Predicted transporter 95.4 0.048 1E-06 59.3 8.5 82 378-465 92-174 (513)
209 KOG2615 Permease of the major 95.2 0.049 1.1E-06 56.7 6.9 100 379-484 72-179 (451)
210 PF01770 Folate_carrier: Reduc 95.1 0.54 1.2E-05 49.7 14.8 59 51-109 26-87 (412)
211 KOG0255 Synaptic vesicle trans 95.1 0.031 6.8E-07 60.6 5.6 93 375-473 118-211 (521)
212 PF11700 ATG22: Vacuole efflux 95.0 0.22 4.9E-06 53.9 11.7 120 32-156 287-413 (477)
213 KOG2325 Predicted transporter/ 94.9 6.5 0.00014 42.6 22.4 382 23-425 27-470 (488)
214 PRK10429 melibiose:sodium symp 94.7 0.12 2.5E-06 55.6 8.8 61 80-142 283-343 (473)
215 TIGR00788 fbt folate/biopterin 94.2 0.058 1.3E-06 58.1 5.0 132 40-176 267-405 (468)
216 PF03092 BT1: BT1 family; Int 94.1 0.19 4E-06 53.7 8.6 112 49-163 10-129 (433)
217 PF05631 DUF791: Protein of un 94.1 0.072 1.6E-06 55.0 5.1 86 44-142 54-140 (354)
218 TIGR01301 GPH_sucrose GPH fami 94.0 0.067 1.4E-06 57.9 4.9 114 360-474 24-157 (477)
219 COG3104 PTR2 Dipeptide/tripept 93.9 0.083 1.8E-06 56.7 5.3 122 59-187 56-183 (498)
220 TIGR00806 rfc RFC reduced fola 93.8 0.086 1.9E-06 56.8 5.3 113 365-484 51-165 (511)
221 PF03137 OATP: Organic Anion T 92.8 0.032 7E-07 61.3 0.1 73 36-111 12-86 (539)
222 PF01306 LacY_symp: LacY proto 92.1 0.087 1.9E-06 55.8 2.3 99 79-184 275-375 (412)
223 KOG2816 Predicted transporter 92.1 0.39 8.5E-06 51.8 7.3 162 9-182 223-390 (463)
224 PF00083 Sugar_tr: Sugar (and 91.9 0.012 2.6E-07 62.2 -4.6 101 376-482 47-151 (451)
225 KOG2504 Monocarboxylate transp 91.9 0.48 1E-05 51.8 7.7 138 37-179 306-445 (509)
226 KOG2615 Permease of the major 91.8 0.51 1.1E-05 49.4 7.3 132 42-184 41-181 (451)
227 COG0477 ProP Permeases of the 91.3 0.72 1.6E-05 43.7 7.6 111 50-165 23-138 (338)
228 KOG1330 Sugar transporter/spin 90.9 0.099 2.2E-06 55.6 1.2 114 364-483 57-171 (493)
229 KOG0252 Inorganic phosphate tr 90.5 0.69 1.5E-05 49.5 6.9 140 24-166 296-450 (538)
230 PRK09669 putative symporter Ya 90.3 0.39 8.5E-06 50.9 5.2 95 368-462 38-138 (444)
231 COG2271 UhpC Sugar phosphate p 90.3 0.42 9.1E-06 50.5 5.2 107 365-477 54-161 (448)
232 KOG2533 Permease of the major 89.0 0.74 1.6E-05 50.1 6.1 112 369-486 75-191 (495)
233 KOG4686 Predicted sugar transp 88.6 0.83 1.8E-05 46.1 5.5 135 26-173 264-403 (459)
234 COG2807 CynX Cyanate permease 88.1 1.3 2.9E-05 46.0 6.8 104 363-473 35-138 (395)
235 COG2211 MelB Na+/melibiose sym 86.8 6.7 0.00014 42.3 11.5 84 59-149 265-351 (467)
236 TIGR00926 2A1704 Peptide:H+ sy 85.6 1.3 2.8E-05 50.0 5.7 62 51-112 10-73 (654)
237 PF06813 Nodulin-like: Nodulin 83.9 4.9 0.00011 39.7 8.3 75 347-428 7-83 (250)
238 TIGR00926 2A1704 Peptide:H+ sy 83.2 2.2 4.7E-05 48.2 6.1 92 369-465 17-117 (654)
239 PF12832 MFS_1_like: MFS_1 lik 82.1 0.54 1.2E-05 37.7 0.6 43 364-406 24-66 (77)
240 PRK11462 putative transporter; 81.7 2.3 5E-05 45.6 5.4 49 369-417 39-87 (460)
241 COG0477 ProP Permeases of the 81.5 4.4 9.4E-05 38.2 6.8 95 376-476 40-138 (338)
242 KOG3098 Uncharacterized conser 81.2 7 0.00015 42.1 8.8 150 25-174 237-404 (461)
243 KOG3764 Vesicular amine transp 81.0 3.7 8E-05 43.4 6.3 108 373-486 104-221 (464)
244 KOG2816 Predicted transporter 80.2 59 0.0013 35.2 15.5 111 371-487 273-388 (463)
245 PF12832 MFS_1_like: MFS_1 lik 79.0 1.3 2.8E-05 35.4 1.9 51 51-102 23-74 (77)
246 KOG0253 Synaptic vesicle trans 78.8 2.6 5.5E-05 44.3 4.3 88 81-175 399-487 (528)
247 PF03209 PUCC: PUCC protein; 78.5 19 0.00041 38.1 10.7 102 57-162 237-341 (403)
248 PF05978 UNC-93: Ion channel r 78.5 3.5 7.6E-05 37.7 4.8 82 79-168 53-135 (156)
249 TIGR00939 2a57 Equilibrative N 70.4 1.2E+02 0.0025 32.6 14.6 20 378-397 310-329 (437)
250 PF06779 DUF1228: Protein of u 69.7 7.3 0.00016 31.9 4.0 66 45-110 8-74 (85)
251 PF02487 CLN3: CLN3 protein; 65.3 1.9E+02 0.0042 30.7 20.8 76 379-462 285-364 (402)
252 KOG2532 Permease of the major 56.8 9.7 0.00021 41.2 3.3 107 370-482 68-177 (466)
253 KOG3626 Organic anion transpor 53.5 35 0.00076 38.9 7.1 72 21-93 385-459 (735)
254 PF05978 UNC-93: Ion channel r 52.8 38 0.00081 31.0 6.0 94 382-485 48-145 (156)
255 PF05631 DUF791: Protein of un 51.8 77 0.0017 33.0 8.7 120 340-469 37-157 (354)
256 COG0738 FucP Fucose permease [ 51.0 1.2E+02 0.0026 32.3 10.0 153 21-183 229-383 (422)
257 KOG2563 Permease of the major 49.2 43 0.00094 36.0 6.5 141 38-180 275-417 (480)
258 PRK03612 spermidine synthase; 48.1 20 0.00044 39.3 4.1 52 437-489 114-169 (521)
259 PF11947 DUF3464: Protein of u 46.8 4.8 0.0001 36.7 -0.8 39 436-474 105-144 (153)
260 KOG3762 Predicted transporter 42.0 12 0.00026 41.0 1.2 53 56-108 38-91 (618)
261 PF01733 Nucleoside_tran: Nucl 37.2 12 0.00026 37.9 0.2 20 379-398 186-205 (309)
262 KOG2325 Predicted transporter/ 33.5 1.6E+02 0.0035 32.1 8.0 112 343-460 37-156 (488)
263 KOG3762 Predicted transporter 26.7 67 0.0014 35.5 3.7 48 359-406 30-77 (618)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-71 Score=599.15 Aligned_cols=452 Identities=19% Similarity=0.261 Sum_probs=378.0
Q ss_pred ccchHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccccccceeeeccCCcHHHHHHHHHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
..+||++++++++++.++|+.|.|++|+++|++++|+||+|+++++..+...+++.+++|++.||+|||.++++|.++.+
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999866655556677799999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcCC
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGD 184 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~ 184 (492)
+||+++++++++.+. .++|+++++.++.|+|.++.++++++++.+|||++||+++|+.+++.|+|++++++++..++.+
T Consensus 103 iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~ 181 (591)
T PTZ00207 103 LGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD 181 (591)
T ss_pred HHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888774 4589999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhcccccccccc--------chhhh-----------------HHHHHHHHHHHHHHHHHH
Q 039263 185 NSKALILLIAWLPAAISFVFLRTFRIIKIVRQ--------ANELK-----------------IFYKMLYISLGLAGFLMV 239 (492)
Q Consensus 185 ~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~--------~~~~~-----------------~f~~~~~~~~~~~~~l~v 239 (492)
+.+.+++++++.+.+++++...++|.+|++++ +++.+ +|...+++.+++++|+++
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~ 261 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPL 261 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999998875321 22222 677777888899999999
Q ss_pred HhhhhcccccCccchhhhhHHHH-HHHhhh-hhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccc
Q 039263 240 VIILQNKYAFKRFEYVGSASLVL-ILLFLP-IAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCC 317 (492)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~-~ll~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (492)
.+++++++++++..+..++++++ ++++.| +++|.+.... ++++ ++ +++ +..+.+++. ++..+++++ .+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~-~~~~-~~----~~~--~~~~~~~~~-~~~~~~~~~-~~ 331 (591)
T PTZ00207 262 QGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDG-KRPH-DD----SDG--KAKEHVEAG-EEVSAAEDK-VV 331 (591)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc-CCcC-CC----ccc--ccccccccc-ccccccccc-cc
Confidence 99999999999999999988777 778888 7888876211 1111 00 000 000000000 000000000 01
Q ss_pred ccccc-CCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhhc-CC-CCCccch-hhhHHHhhhhhhhc
Q 039263 318 TENIF-MPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSL-GY-PARSTTT-FVSLVSIWNYLGRV 393 (492)
Q Consensus 318 ~~~~~-~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~sl-g~-~~~~~~~-~Vsl~Si~N~~GRl 393 (492)
.++.+ .+|++++ |++|.+++.|||++|+.++|+.|+|++++||++||++|+ |+ ++.+.++ +|+++|+||++||+
T Consensus 332 ~~~~~~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl 409 (591)
T PTZ00207 332 ETDVDYIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRL 409 (591)
T ss_pred cccccCCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHH
Confidence 11122 3366665 999999999999999999999999999999999999999 77 3332233 89999999999999
Q ss_pred ccchhhHHHhhhcC----CCchHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcc
Q 039263 394 VAGFASEILLKKYK----IPRPLLFTFVLLFSCVGHPFIAYGIP-NSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYS 468 (492)
Q Consensus 394 ~~G~lSD~~~~~~~----~~R~~~l~i~~~l~~~~~ll~~~~~~-~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g 468 (492)
.+|++| .+.+|++ +||+.+++++++ +++++++++...+ ..||++++++|+|||.+|++.|++++|+|| ||+|
T Consensus 410 ~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g 486 (591)
T PTZ00207 410 CMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPA 486 (591)
T ss_pred HHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchH
Confidence 999998 4445554 999999999999 8888888777776 799999999999999999999999999999 9999
Q ss_pred cccccceehhhHHHHHHhhhccCC
Q 039263 469 TLYNFGAVASPVGAYILNVKVAGQ 492 (492)
Q Consensus 469 ~nyg~~~la~~~gs~l~~~~l~g~ 492 (492)
+|||++.+++|+|+++||++++|+
T Consensus 487 ~~yN~~~~a~pigs~~~n~~l~G~ 510 (591)
T PTZ00207 487 KHYNFCFLGSVLSAIFLNRLLYGE 510 (591)
T ss_pred HHhhHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999985
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=4.4e-54 Score=420.74 Aligned_cols=245 Identities=47% Similarity=0.842 Sum_probs=235.7
Q ss_pred hHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHHH
Q 039263 28 RWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGY 107 (492)
Q Consensus 28 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy 107 (492)
||+++++++++|+++|+.|.||+|||+||+++|+||+|+|++++++|+|.++|+++|+++||+|||.++++|+++.++||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcCCChh
Q 039263 108 FMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSK 187 (492)
Q Consensus 108 ~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~ 187 (492)
+++|++++++++++++|++|++.+++++|++|+||++++||+||||++||+|+|++|+++||||+||+++|+++|++|++
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccccc----ccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHH
Q 039263 188 ALILLIAWLPAAISFVFLRTFRIIKIV----RQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLI 263 (492)
Q Consensus 188 ~fllfla~~~~~v~~~~~~~i~~~~~~----~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 263 (492)
+|++|+++.|.++++++++++|.+|++ ++++++++|.....+++++++|+++.++++++.++++..+.....++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999863 3456688898888888999999999999999999999999999999899
Q ss_pred HHhhhhhhh
Q 039263 264 LLFLPIAIV 272 (492)
Q Consensus 264 ll~~p~~~~ 272 (492)
+|++|+++|
T Consensus 241 lL~~Pl~i~ 249 (250)
T PF06813_consen 241 LLLLPLAIP 249 (250)
T ss_pred HHHhhhhcc
Confidence 999999876
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=7.6e-25 Score=222.96 Aligned_cols=339 Identities=22% Similarity=0.291 Sum_probs=234.2
Q ss_pred chHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFF 105 (492)
Q Consensus 27 ~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~ 105 (492)
+||..+++.+...++.|..|.|+.+.|++++++|+|.+|++++.....++.. ..++.|.+.||+|+|.++.++.++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 4788899999999999999999999999999999999999998666667765 489999999999999999999999988
Q ss_pred HHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcCCC
Q 039263 106 GYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGDN 185 (492)
Q Consensus 106 Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~ 185 (492)
|+.++... .+.|.+.....+.|.+.+..+.++.....+|||++||++.++.....++|+.+..++...+.+.
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 152 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINL- 152 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhc-
Confidence 87554432 2356565555578888888888888889999999999999999888888877765544432210
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHH
Q 039263 186 SKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILL 265 (492)
Q Consensus 186 ~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll 265 (492)
.+-+..|. + .++..++..
T Consensus 153 -------------------------------~~~~~~f~----~---~~~~~~~~~------------------------ 170 (377)
T TIGR00890 153 -------------------------------EGVPAAFI----Y---MGIIFLLVI------------------------ 170 (377)
T ss_pred -------------------------------ccHHHHHH----H---HHHHHHHHH------------------------
Confidence 00011111 1 000000000
Q ss_pred hhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHH
Q 039263 266 FLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLII 345 (492)
Q Consensus 266 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWll 345 (492)
.+.....++ ++++. ++++ + + .+.++.+.++.+|++++|.+
T Consensus 171 -~~~~~~~~~-----------------~~~~~-~~~~-------~------------~--~~~~~~~~~~~~~~~~~~~~ 210 (377)
T TIGR00890 171 -VLGAFLIGY-----------------PPGQL-IKTN-------I------------E--VSVKDYTVWEMLRTPQFWVL 210 (377)
T ss_pred -HHHHHheec-----------------Cchhc-cccC-------c------------c--cchhhhhHHHHHcCccHHHH
Confidence 000000010 00000 0000 0 0 00012356789999999999
Q ss_pred HHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHH
Q 039263 346 FIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGH 425 (492)
Q Consensus 346 f~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ 425 (492)
+..+++.......+.+...++.++++.++.+.+...++.++.+..||+.+|+++||++||+ .+.+..+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~------~~~~~~~~~~~~~ 284 (377)
T TIGR00890 211 YLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK------TMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------hhhHHHHHHHHHH
Confidence 9888776655555555566677788877666777889999999999999999999996643 2334444555554
Q ss_pred HHHHhcC--Cc-hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 426 PFIAYGI--PN-SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 426 ll~~~~~--~~-~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
++....+ .. .++....+.|+++|..++++|+++.|.++.++.++.+|+......+|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 343 (377)
T TIGR00890 285 AAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVA 343 (377)
T ss_pred HHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence 4433322 11 23345667899999999999999999999999999888865544333
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.1e-23 Score=223.37 Aligned_cols=384 Identities=21% Similarity=0.274 Sum_probs=255.0
Q ss_pred chHHHHHHHHHH-HHhhCcccccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLI-MAVAGATYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 27 ~Rw~~l~a~~~i-~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
--|.+.+++.++ ..+-|..+.++++-+++++.++-+.+|.+++ ++...+.-..+++.+.+.||+|.|.+.++|+++.+
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 358888888766 4566889999999999999999999998887 55555555569999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCchhHHHH-HHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMC-LYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~-~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
+|+.+-..+ .++|+++ .|+++.|+|.++.|..+++...++|++||++|+|+..++.|+|..+++.+.+.+++
T Consensus 123 ~g~~lssF~-------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~ 195 (509)
T KOG2504|consen 123 LGLLLSSFA-------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLS 195 (509)
T ss_pred HHHHHHHHH-------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHH
Confidence 997643322 2367765 68999999999999999999999999999999999999999999999888777665
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHH
Q 039263 184 DNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLI 263 (492)
Q Consensus 184 ~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 263 (492)
. .+....+.....+. +-. +..-
T Consensus 196 ~--------------------------------~G~r~~~l~~~~~~-------l~~-------------------~~~~ 217 (509)
T KOG2504|consen 196 K--------------------------------YGWRGALLIFGGIS-------LNV-------------------LVAG 217 (509)
T ss_pred H--------------------------------hCcHHHHHHHHHHH-------HHH-------------------HHHH
Confidence 3 11122222111110 000 0000
Q ss_pred HHhhhhhhhhHHh--hhhccCCCCccccCCCCCccc-cccCCCCCCCCCCccccccccccccCCCC--CCCccc---HHH
Q 039263 264 LLFLPIAIVIKEE--ISLRKSKKPSLEDANSHPELK-IVTELPPQQASPSTEAQVCCTENIFMPPD--RGEDYT---ILQ 335 (492)
Q Consensus 264 ll~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~t---~~~ 335 (492)
.+.-|.....+++ .+.+.++ .+.+..+.+.... .+++... +. .+ ++.+...++.+++.+ ..+..- -++
T Consensus 218 ~~~rp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 293 (509)
T KOG2504|consen 218 ALLRPLSPPKKPNEEKDLRNSA-ASVESTPKPVELRISERDSGL-KK-LS-LSNLATLKRGPDKWRNSPLQAFLSMLDLS 293 (509)
T ss_pred HHcCCCCcCCCchhhhhhcccc-ccccccccccccccccCCCCC-Cc-cc-ccchhhhhhCCccccccchhhhhhhhhHH
Confidence 0111111111000 0000000 0000000000000 0000000 00 00 000000000001000 011111 368
Q ss_pred HhcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHH
Q 039263 336 ALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFT 415 (492)
Q Consensus 336 ~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~ 415 (492)
++|++.||.+.+...+....-..-..-+...+++.|+++.+++..++++++.|..||++.|++.|+-. +++.+...
T Consensus 294 ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~----~~~~~~~~ 369 (509)
T KOG2504|consen 294 LLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG----IRALVLFL 369 (509)
T ss_pred HHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc----cchHHHHH
Confidence 99999999998877776665555555677888899999999999999999999999999999999874 24455555
Q ss_pred HHHHHHHHHHHHHHhc-CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHH
Q 039263 416 FVLLFSCVGHPFIAYG-IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAY 483 (492)
Q Consensus 416 i~~~l~~~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~ 483 (492)
++.+...++.+..... +...+...+++.|++.|...++.|.++.|+.|+.+++.-||+..+...++..
T Consensus 370 ~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l 438 (509)
T KOG2504|consen 370 LTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGAL 438 (509)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHH
Confidence 6666666665443332 2346788888999999999999999999999999999999997665555543
No 5
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.80 E-value=5.2e-19 Score=189.78 Aligned_cols=358 Identities=12% Similarity=0.130 Sum_probs=199.6
Q ss_pred hHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHH
Q 039263 28 RWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFG 106 (492)
Q Consensus 28 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~G 106 (492)
+|..........+..-..|.++.+.|++++++|+|++|.+++.+...++..+ .++.|++.||+|+|.++.++.++..++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 3444444444444444478999999999999999999999887666676665 599999999999999999988888777
Q ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCC
Q 039263 107 YFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDN 185 (492)
Q Consensus 107 y~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~ 185 (492)
..+.... ++ .+.+.+..++.|.+.+.. ..+.....+||| ++||++.|+..+...+++.+-..+.
T Consensus 115 ~~~~~~~-----~s--~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~------- 179 (476)
T PLN00028 115 VFCMSLV-----SS--ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM------- 179 (476)
T ss_pred HHHHHHh-----cC--HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH-------
Confidence 6543321 22 344444444455554432 333444678998 4799999997665555544432211
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHH
Q 039263 186 SKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILL 265 (492)
Q Consensus 186 ~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll 265 (492)
|.+...+ ...-. . .....+..+.+ . ++..++.. ++..
T Consensus 180 -----------~~i~~~~----~~~~~---~--~~~gWr~~f~i-~--g~l~l~~~--------------------l~~~ 216 (476)
T PLN00028 180 -----------PLVFPLI----KDAGA---P--SFTAWRIAFFV-P--GLLHIIMG--------------------ILVL 216 (476)
T ss_pred -----------HHHHHHH----HhcCC---c--chhhhHHHHHH-H--HHHHHHHH--------------------HHHH
Confidence 1111000 00000 0 00112211111 0 00000000 0000
Q ss_pred hhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHH
Q 039263 266 FLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLII 345 (492)
Q Consensus 266 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWll 345 (492)
..+ + + .|++. . ++. ++ + .+.++.+....+++.++++++|++
T Consensus 217 ~~~-----~-~---------------~p~~~-~-~~~----~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 257 (476)
T PLN00028 217 TLG-----Q-D---------------LPDGN-Y-REL----KK-S-----------GTMPKDSFSKVLRYGVTNYRTWIL 257 (476)
T ss_pred HHc-----C-c---------------CCCCc-h-hhH----Hh-c-----------CccccccHHHHHHHHHcCchhHHH
Confidence 000 0 0 00000 0 000 00 0 000000011246788999999999
Q ss_pred HHHHHhhccceeEEecchhHHH-hhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCC-CchHHHHHHHHHHHH
Q 039263 346 FIATTCGVGGTLTAIDNLGQIG-SSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKI-PRPLLFTFVLLFSCV 423 (492)
Q Consensus 346 f~~~~~~~g~Gl~~i~n~~~I~-~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~-~R~~~l~i~~~l~~~ 423 (492)
++.+++..+....+.+....+. +..|++..+++...++..+++.+||+.+|+++||+.||++. .|.+.+.+..++..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i 337 (476)
T PLN00028 258 ALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGV 337 (476)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHH
Confidence 9887766555544444455554 44688877788888999999999999999999999987543 355555444444444
Q ss_pred HHHHHHhcCCc-hhHHHHHHHHh----hhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHHHhh
Q 039263 424 GHPFIAYGIPN-SLYAASVIIGF----CFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYILNV 487 (492)
Q Consensus 424 ~~ll~~~~~~~-~l~~~~~liG~----~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l~~~ 487 (492)
..+++...... ...+..++.++ +.|..+++.| |+ ++|+.|+++|++..+..+|+.+...
T Consensus 338 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~-~~~~~g~~~g~~~~~g~lg~~i~~~ 401 (476)
T PLN00028 338 FCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVP----FV-SRRSLGVISGLTGAGGNVGAVLTQL 401 (476)
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCc----cc-ChhhchhhhhhhhccccHHHHHHHH
Confidence 33332222111 12222333344 4455555444 43 5689999999987766666655443
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.80 E-value=1.3e-18 Score=184.04 Aligned_cols=155 Identities=14% Similarity=0.156 Sum_probs=110.1
Q ss_pred hhhccccccccccchHHHHHHHHHHHHhh-CcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCC
Q 039263 14 REMKSSSLVGVLTGRWFMVFASLLIMAVA-GATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITP 91 (492)
Q Consensus 14 ~~~~~~~~~~~~~~Rw~~l~a~~~i~l~~-Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~G 91 (492)
.||++...+.. .-||..+...++...+. -..+.++.+.|++++++|+|..|.+++.+...++.. ..++.|++.||+|
T Consensus 8 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g 86 (434)
T PRK11663 8 TDKHEIDARYR-YWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSN 86 (434)
T ss_pred CCHHHHHhHhH-HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcC
Confidence 45555554442 23444444444333333 335688899999999999999999998666666654 5899999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhh
Q 039263 92 PWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLS 170 (492)
Q Consensus 92 pr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLs 170 (492)
+|.++.++.++..++..++... + ++|.+++...+.|.+.+..+.+......+|||+ +||++.|+.....++|
T Consensus 87 ~r~~~~~~~~~~~~~~~~~~~~-----~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 159 (434)
T PRK11663 87 ARYFMGIGLIATGIINILFGFS-----S--SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVG 159 (434)
T ss_pred CchhHHHHHHHHHHHHHHHHHH-----h--HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999888886544322 2 245555544556666666677778888999985 6999999988888877
Q ss_pred HHHHHH
Q 039263 171 GAILTQ 176 (492)
Q Consensus 171 a~i~s~ 176 (492)
+.+-..
T Consensus 160 ~~~~~~ 165 (434)
T PRK11663 160 GALIPL 165 (434)
T ss_pred HHHHHH
Confidence 766543
No 7
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.79 E-value=2.5e-18 Score=183.38 Aligned_cols=363 Identities=16% Similarity=0.178 Sum_probs=215.3
Q ss_pred cchHHHHHHHHHHHHh-hCcccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAV-AGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~-~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
..||..+.++.+.+.. .+..+.++.+-+++++.+|+|+++.+++.+...++. ..+++.|++.||+|+|.+++++.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 3479888887777653 445678899999999999999999999755444443 45889999999999999999898888
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHH-HHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCL-YICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~-~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
.++..+... . ++ .|.++. ...+.|.+.+.....+.....+|||++||++.|+.....++++.+...+.....
T Consensus 95 ~~~~~~~~~--~---~~--~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 95 SLGMILASF--S---SN--VIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred HHHHHHHHH--h---hh--HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 777654322 2 22 444433 345667777766566677778999999999999988888777666533222111
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHH
Q 039263 183 GDNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVL 262 (492)
Q Consensus 183 ~~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 262 (492)
+ . .+-...|. + . ++..++..+ ..
T Consensus 168 ~--------------------------~------~gwr~~f~----~-~--~~~~~~~~v------------------~~ 190 (455)
T TIGR00892 168 E--------------------------S------FGWRGSFL----I-L--GGLLLHCCV------------------CG 190 (455)
T ss_pred H--------------------------H------hChHHHHH----H-H--HHHHHHHHH------------------HH
Confidence 0 0 00012222 1 0 000000000 00
Q ss_pred HHHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhH
Q 039263 263 ILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDM 342 (492)
Q Consensus 263 ~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~F 342 (492)
.+..| .+++.+ ..+++ +++ ..+++ . +.++. . ..+..+...+.-..+.+++++|
T Consensus 191 -~~~~~----~~~~~~--~~~~~------~~~--~~~~~------~-~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
T TIGR00892 191 -ALMRP----VGPSQR--VSKSK------SKE--GLPPD------G-STKKL-S----KKSTAEKINRFLDFSLFTHRGF 243 (455)
T ss_pred -HHhCC----CCcccc--ccccc------ccc--cCCCC------C-ccccc-c----ccchhhhhhhhcchHHhcCchH
Confidence 00000 000000 00000 000 00000 0 00000 0 0000000011112468899999
Q ss_pred HHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHH
Q 039263 343 LIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSC 422 (492)
Q Consensus 343 Wllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~ 422 (492)
|.+....++....-.+......++.++.|+++.+.+...++..+.+.++|+..|.++||...+ ..|...+.+..++..
T Consensus 244 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~~~ 321 (455)
T TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIR--PHVQYLFSFALLFNG 321 (455)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--HHHHHHHHHHHHHHH
Confidence 988776655444334444556677778888888888889999999999999999999973211 122222322233333
Q ss_pred HHHHHHHhc-CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 423 VGHPFIAYG-IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 423 ~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
++.++.... ....+++..++.|+++|......++++.|.+..++.|+.+|+..+..-+|
T Consensus 322 l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 381 (455)
T TIGR00892 322 LTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCA 381 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHH
Confidence 333332222 23345667778899999999999999999999889999988875544443
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.79 E-value=3.9e-18 Score=182.15 Aligned_cols=360 Identities=11% Similarity=0.009 Sum_probs=199.9
Q ss_pred cchHHHHHHHHHHHHhhC-cccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAG-ATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~G-t~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
+.+|..+....+.-...- .-+.+++-.|++++++|+|.+|++++.++..++.. ..++.|.+.||+|+|.++.++.++.
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 344544444433333322 35778888999999999999999998666666654 4899999999999999998888877
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
+++...+.....+.. .+++.+...-++.|.+.+....++.+...+|||+ +||++.|+......+|+++-..+...
T Consensus 105 ~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~-- 180 (467)
T PRK09556 105 AICMLGFGASLGSGS--VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALW-- 180 (467)
T ss_pred HHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHH--
Confidence 776655554333332 2366676666777888777778888889999985 79999999887777777665332211
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHH
Q 039263 183 GDNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVL 262 (492)
Q Consensus 183 ~~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 262 (492)
..+..- ..+....|. . . ++..++..+
T Consensus 181 ------------------------~~~~~~---~~~~~~~f~-~--~----g~~~~~~~i-------------------- 206 (467)
T PRK09556 181 ------------------------GANYFF---DGHVIGMFI-F--P----SIIALIIGF-------------------- 206 (467)
T ss_pred ------------------------HHHhhc---cCcchhHHH-H--H----HHHHHHHHH--------------------
Confidence 000000 000011111 0 0 000000000
Q ss_pred HHHhhhhhhhhHHhhh--hccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcch
Q 039263 263 ILLFLPIAIVIKEEIS--LRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSI 340 (492)
Q Consensus 263 ~ll~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~ 340 (492)
+.....+++++ .+.+++ +.. .++ . +++++ . ++ +++....+.-.++.+|++
T Consensus 207 -----~~~~~~~~~p~~~~~~~~~-------~~~-----~~~-----~-~~~~~-~--~~--~~~~~~~~~~~~~~l~~~ 258 (467)
T PRK09556 207 -----IGLRYGSDSPEELGWGKAE-------EIF-----GEP-----I-SEEDK-E--TE--STDMTKWQIFVEYVLKNP 258 (467)
T ss_pred -----HHHHhCCCChhhcCCCChh-------hcc-----cCc-----c-chhhh-c--cc--cccCcHHHHHHHHHHcCh
Confidence 00000011110 000000 000 000 0 00000 0 00 000000011123489999
Q ss_pred hHHHHHHHHHhhccceeEEecchhHHH-hhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 341 DMLIIFIATTCGVGGTLTAIDNLGQIG-SSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 341 ~FWllf~~~~~~~g~Gl~~i~n~~~I~-~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
.+|.+++..++..+.-..+.+-...+. +.+|++..+++...++..+++.+|++.+|+++||++||+ .........
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~----~~~~~~~~~ 334 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR----ALVACIALA 334 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc----hHHHHHHHH
Confidence 999999877765443222222233334 357888777778888899999999999999999997653 111111111
Q ss_pred HHHHHHHHHHhcCCc-hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccce
Q 039263 420 FSCVGHPFIAYGIPN-SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGA 475 (492)
Q Consensus 420 l~~~~~ll~~~~~~~-~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~ 475 (492)
......+++...... .+++...+.|++..+........+.|.+..++.|+-.|+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~ 391 (467)
T PRK09556 335 LIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKG 391 (467)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHH
Confidence 111111112222222 23455556675433333344467779999889998888864
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.79 E-value=4.3e-18 Score=177.40 Aligned_cols=340 Identities=12% Similarity=0.068 Sum_probs=210.8
Q ss_pred ccccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHH
Q 039263 23 GVLTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGS 100 (492)
Q Consensus 23 ~~~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~ 100 (492)
++.++||..++.+.++..+.+. .+.++...|++++++|+|+.|.+++.+...++..+ .++.|++.||+|+|.++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 3445899999999888888877 68899999999999999999999987777777655 789999999999999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHH
Q 039263 101 IMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYH 179 (492)
Q Consensus 101 vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~ 179 (492)
++..++..+.... + +.+.+.....+.|.+.+..+++......++|| ++||++.|+...+..+|+.+-..+..
T Consensus 88 ~~~~~~~~~~~~~-----~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 160 (406)
T PRK11551 88 ALFGLFSLATAQA-----W--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHHHHHHh-----c--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776543321 2 24556666677888888888888888999997 57999999987777666655432221
Q ss_pred HHcCCChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhH
Q 039263 180 AFYGDNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSAS 259 (492)
Q Consensus 180 ~~f~~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~ 259 (492)
... . ..+.+..|. +. . +..++..
T Consensus 161 ~~~--------------------------~------~~~~~~~~~----~~-~--~~~~~~~------------------ 183 (406)
T PRK11551 161 LAA--------------------------G------DAAWRHIFY----VG-G--VGPLLLV------------------ 183 (406)
T ss_pred HHc--------------------------c------ccCHHHHHH----HH-H--HHHHHHH------------------
Confidence 110 0 000011111 10 0 0000000
Q ss_pred HHHHHHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcc
Q 039263 260 LVLILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFS 339 (492)
Q Consensus 260 ~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t 339 (492)
.+..... +|+.+.. +++ .+ + ++ +++. .....+..+.
T Consensus 184 -~~~~~~l------~~~~~~~-----------~~~------~~----~----~~---------~~~~---~~~~~~~~~~ 219 (406)
T PRK11551 184 -PLLMRWL------PESRAFA-----------QAA------GA----G----KQ---------RAPV---LRALFGEGRA 219 (406)
T ss_pred -HHHHHhC------CCChhHH-----------hcc------Cc----c----hh---------hhhh---HHHHhhhhhh
Confidence 0000001 1100000 000 00 0 00 0000 0000011112
Q ss_pred hhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 340 IDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 340 ~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
+..+.++..+++....-..+.+...++.++.|.++.+.+...++..+.+..||+..|.++||+++|+ .+.+..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~------~~~~~~~ 293 (406)
T PRK11551 220 TATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR------VVLLIYA 293 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH------HHHHHHH
Confidence 2334444433333222223344456667778888778888889999999999999999999996542 3333333
Q ss_pred HHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccccee
Q 039263 420 FSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAV 476 (492)
Q Consensus 420 l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~l 476 (492)
.+.++.+.+.... ...+++...+.|++.++..+..++++.|.+..++.|+..|+...
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 351 (406)
T PRK11551 294 GILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVA 351 (406)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHH
Confidence 3444433332222 22455667778999988999999999999999998888887543
No 10
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.77 E-value=7.7e-18 Score=171.49 Aligned_cols=338 Identities=16% Similarity=0.153 Sum_probs=198.2
Q ss_pred ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
...++...|.+++++|+|..|.+++.....++..+ .++.|++.||+|+|.++.+|.++..++..+.... + +.
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~--~~ 83 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-----T--SL 83 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-----h--hH
Confidence 56778888999999999999999986666666654 8999999999999999999999888887665533 2 25
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISF 202 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~ 202 (492)
|.+.....+.|.+.+..+........+++|+ +||++.|+......+++.+-..+.......
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------------ 145 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE------------------ 145 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh------------------
Confidence 6666677778888888888888889999985 699999998888777766654222111110
Q ss_pred hhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccC
Q 039263 203 VFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKS 282 (492)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~ 282 (492)
. .+....|. + .++..++..+ + .....+++.+..+.
T Consensus 146 -------~------~~~~~~~~----~---~~~~~~~~~~-------------------~------~~~~~~~~~~~~~~ 180 (379)
T TIGR00881 146 -------L------YSWHWVFI----V---PGIIAIIVSL-------------------I------CFLLLRDSPQSCGL 180 (379)
T ss_pred -------c------CCchhHHH----H---HHHHHHHHHH-------------------H------HheeeCCCcccccc
Confidence 0 00011111 1 0000000000 0 00001111100000
Q ss_pred CCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecc
Q 039263 283 KKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDN 362 (492)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n 362 (492)
+ + +++++ .+ +. +++. +.+++..+..+...++.+|++.+|.+.+..++.......+...
T Consensus 181 ~----~-~~~~~-----~~------~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (379)
T TIGR00881 181 P----P-AEEMP-----NE------EP--DGDA----EKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDW 238 (379)
T ss_pred C----c-cccCc-----cc------cc--cccc----ccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00000 00 00 0000 0000011112235678899999999887766544332222222
Q ss_pred hhHHH-hhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC---CchhHH
Q 039263 363 LGQIG-SSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI---PNSLYA 438 (492)
Q Consensus 363 ~~~I~-~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~---~~~l~~ 438 (492)
...+. +.+|.++.+.+...++..+.+.+||++.|+++||..++++. ...........++...+.... .....+
T Consensus 239 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (379)
T TIGR00881 239 SPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG---PLAVFFMALIIVSLLVYWLNPAANPLMDLI 315 (379)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch---HHHHHHHHHHHHHHHHHhcCcchhHHHHHH
Confidence 33333 34677777777788999999999999999999987544321 111122222222222221111 112334
Q ss_pred HHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceeh
Q 039263 439 ASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVA 477 (492)
Q Consensus 439 ~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la 477 (492)
...+.|+..++.....+.++.|.+..++.|+..++....
T Consensus 316 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 354 (379)
T TIGR00881 316 CLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFF 354 (379)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHh
Confidence 455667766666777788999999999989888876443
No 11
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.77 E-value=3.3e-18 Score=174.29 Aligned_cols=345 Identities=14% Similarity=0.018 Sum_probs=203.7
Q ss_pred ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
.+.++...|.+++++|+|..|.+++.....++... .++.|.+.||+|+|.++.++.++..++..++... + ++
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~--~~ 82 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-----G--AY 82 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----c--CH
Confidence 46678888999999999999999986666676654 8899999999999999999998888887655432 2 25
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISF 202 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~ 202 (492)
|.+....++.|.+.+..+++......+++|+ +||++.|+.....++|+.+-..+...+.+.
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------------------ 144 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH------------------ 144 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh------------------
Confidence 6666667778888888888888889999985 799999998888887766654433222211
Q ss_pred hhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccC
Q 039263 203 VFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKS 282 (492)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~ 282 (492)
. +.+..|. + .++..++..+ +.....+++.+..+
T Consensus 145 --------~------~~~~~~~----~---~~~~~~~~~~-------------------------~~~~~~~~~~~~~~- 177 (399)
T TIGR00893 145 --------F------SWQWAFI----I---EGVLGIIWGV-------------------------LWLKFIPDPPQKAK- 177 (399)
T ss_pred --------C------CchHHHH----H---HHHHHHHHHH-------------------------HhhheecCCCCccc-
Confidence 0 0011111 1 0000000000 00000011100000
Q ss_pred CCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecc
Q 039263 283 KKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDN 362 (492)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n 362 (492)
. .+ +++++. . . + .... + ..++++++....+.++.+|++++|.+++..++.......+...
T Consensus 178 --~-~~-~~~~~~-~--~-~----~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (399)
T TIGR00893 178 --W-LT-EEEKYI-V--V-G----GLLA-E-------QQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTW 237 (399)
T ss_pred --c-CC-HHHHhh-c--c-h----hhcc-c-------cccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHH
Confidence 0 00 000000 0 0 0 0000 0 0000011112335688999999999998887766665555555
Q ss_pred hhHHHh-hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc--CCchhHHH
Q 039263 363 LGQIGS-SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG--IPNSLYAA 439 (492)
Q Consensus 363 ~~~I~~-slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~--~~~~l~~~ 439 (492)
..++.+ ..+.++.+.+...++..+.+.+|++..|.++||++||+.................+....... ......+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (399)
T TIGR00893 238 FPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALA 317 (399)
T ss_pred HHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 565554 467776677778899999999999999999999988751110000111111111111111111 12223333
Q ss_pred HHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 440 SVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 440 ~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
...++....+......++++|.+..++.|+.+++.....-+|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 359 (399)
T TIGR00893 318 LVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLG 359 (399)
T ss_pred HHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHh
Confidence 344444333378889999999999999998888864443333
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.76 E-value=2.7e-17 Score=171.84 Aligned_cols=318 Identities=13% Similarity=0.075 Sum_probs=196.8
Q ss_pred HHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHH
Q 039263 35 SLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWL 112 (492)
Q Consensus 35 ~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~ 112 (492)
...+.+.... .+..+...|++++++|+|.+|.+++.+...++. ...++.|++.||+|+|.++.+|.++..+|..+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~- 92 (393)
T PRK09705 14 LVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRE- 92 (393)
T ss_pred HHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHH-
Confidence 4444444444 477999999999999999999999755555554 4589999999999999999999999999976433
Q ss_pred HHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHH
Q 039263 113 AVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILL 192 (492)
Q Consensus 113 ~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllf 192 (492)
..++ ++.+.+.-++.|.|.+..+........|+||+|||++.|+..++..+|+.+-..+....
T Consensus 93 ----~a~~--~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l----------- 155 (393)
T PRK09705 93 ----LYPQ--SALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWL----------- 155 (393)
T ss_pred ----HCcc--hHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 2333 45566667888999998888777777899999999999987766555544443221110
Q ss_pred HHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhh
Q 039263 193 IAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIV 272 (492)
Q Consensus 193 la~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~ 272 (492)
..+. .+.+..+. . .. +..++.. . ...+
T Consensus 156 ---------------~~~~-----~~w~~~~~----~-~~--~~~~~~~-------------------~---~~~~---- 182 (393)
T PRK09705 156 ---------------VQHS-----ETWYQTLA----W-WA--LPAVVAL-------------------F---AWWW---- 182 (393)
T ss_pred ---------------HHhc-----CCHHHHHH----H-HH--HHHHHHH-------------------H---HHHH----
Confidence 0000 00011111 0 00 0000000 0 0000
Q ss_pred hHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhh
Q 039263 273 IKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCG 352 (492)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~ 352 (492)
.. + + +|++ ++ +++ .+.++.++++++|.+.+.+++.
T Consensus 183 ~~------~---~------~~~~-----~~--------------------~~~-----~~~~~~l~~~~~~~l~~~~~~~ 217 (393)
T PRK09705 183 QS------A---R------EVAS-----SH--------------------KTT-----TTPVRVVFTPRAWTLGVYFGLI 217 (393)
T ss_pred Hh------c---C------CCcc-----cc--------------------CCC-----cCCcccccCHhHHHHHHHHHHH
Confidence 00 0 0 0000 00 000 0123567888999887766554
Q ss_pred ccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC
Q 039263 353 VGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI 432 (492)
Q Consensus 353 ~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~ 432 (492)
...-..+.+-..++.++.|.+..+++...+++++++.+||+.+|.++||.+||+ .+.+...+..++.+++...+
T Consensus 218 ~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~------~~~~~~~l~~~~~~~~~~~~ 291 (393)
T PRK09705 218 NGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK------LLMLALVLQLVGFCGFIWLP 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH------HHHHHHHHHHHHHHHHHHcc
Confidence 333223334456666778888778888999999999999999999999986542 33334444444443332212
Q ss_pred CchhHHHHHHHHhhhcchhhhHHHHHHHhhcC-CCcccccccc
Q 039263 433 PNSLYAASVIIGFCFGAQWPLLFAIISEIFGL-KYYSTLYNFG 474 (492)
Q Consensus 433 ~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~-k~~g~nyg~~ 474 (492)
.....+...+.|++.|..+......+.|.+.+ ++-|+.+|++
T Consensus 292 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~ 334 (393)
T PRK09705 292 LQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFM 334 (393)
T ss_pred chHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 22222334567888998888887788888864 4556666653
No 13
>TIGR00895 2A0115 benzoate transport.
Probab=99.74 E-value=2.6e-17 Score=169.03 Aligned_cols=366 Identities=14% Similarity=0.124 Sum_probs=210.0
Q ss_pred ccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIM 102 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl 102 (492)
.+++|..+..+.+..++.|. .+.++.+.|.+.+++|++..|.+++.....++..+ .++.|.+.||+|+|.++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34567777777777777765 57788899999999999999999886666666654 78999999999999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHH
Q 039263 103 NFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAF 181 (492)
Q Consensus 103 ~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~ 181 (492)
..+++.++... + +.+.+.....+.|.+.+..+.+......+++|+ +||++.|+......+|+.+-..+...+
T Consensus 92 ~~~~~~~~~~~-----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 92 FSVFTLLCALA-----T--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHHHHc-----c--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 88887654422 2 245566667778888888888888889999985 699999998877777766554443332
Q ss_pred cCC-ChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHH
Q 039263 182 YGD-NSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASL 260 (492)
Q Consensus 182 f~~-~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 260 (492)
.+. +....+++.++.+.+..++...+++..+..
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 198 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDF---------------------------------------------- 198 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHHHHHhCCCCChH----------------------------------------------
Confidence 221 000011111111111111111111000000
Q ss_pred HHHHHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHH----H
Q 039263 261 VLILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQ----A 336 (492)
Q Consensus 261 ~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~----~ 336 (492)
..+.+.+.. ++..+ +.+++.. .++ ++ +.++ +..+++ .....++ .
T Consensus 199 -----------~~~~~~~~~---~~~~~-~~~~~~~---~~~----~~-~~~~------~~~~~~---~~~~~~~~~~~~ 246 (398)
T TIGR00895 199 -----------LVSKRPETV---RRIVN-AIAPQMQ---AEA----QS-ALPE------QKATQG---TKRSVFKALFQG 246 (398)
T ss_pred -----------HHhcCHHHH---HHHHH-HHHHhcc---ccc----cc-cccc------cccccc---hhhHHHHHHhcc
Confidence 000000000 00000 0000000 000 00 0000 000000 0111122 1
Q ss_pred hcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHH
Q 039263 337 LFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTF 416 (492)
Q Consensus 337 l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i 416 (492)
.+.+.+|.++..+++.......+.+....+.+..+.+..+.+...++.+++..+|++++|.++||+++| ..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~ 320 (398)
T TIGR00895 247 KTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR------VTALL 320 (398)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH------HHHHH
Confidence 223445555555444332221222223355556788777777888999999999999999999999653 12222
Q ss_pred HHHHHHHHHHHHH-hcCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 417 VLLFSCVGHPFIA-YGIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 417 ~~~l~~~~~ll~~-~~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
..+..+...++.. ......+++..++.|+++|.......+++.|.+..++-|+-+|+.....-+|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 386 (398)
T TIGR00895 321 LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLG 386 (398)
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence 2222222222222 2233356677788899999999999999999999888888777654433333
No 14
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.74 E-value=4.6e-17 Score=173.21 Aligned_cols=147 Identities=14% Similarity=0.168 Sum_probs=102.4
Q ss_pred cchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
+++|..+.+..+....... .+.++...|.++++ |+|+.+.+++.+...++.. ..++.|.+.||+|+|.++++|.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 25 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 3456665555544443333 24578888999988 9999999998666666654 5899999999999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHH
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQ 176 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~ 176 (492)
.++...+...-.. . .+.+.+.....+.|.+.+..+........+|||+ +||++.|+......+++.+..+
T Consensus 104 ~i~~~~~~~~~~~--~-~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 174 (452)
T PRK11273 104 AAVMLFMGFVPWA--T-SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPL 174 (452)
T ss_pred HHHHHHHHhhhcc--c-ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHH
Confidence 8777654432111 1 1244444444566666777666667778899985 6999999977777666655543
No 15
>PRK03699 putative transporter; Provisional
Probab=99.73 E-value=1.4e-16 Score=166.23 Aligned_cols=339 Identities=15% Similarity=0.128 Sum_probs=204.4
Q ss_pred ccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIM 102 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl 102 (492)
..|||.....+.+...+.|. .+.++..-|++++++|+|.+|.+.+.....++..+ .++.|++.||+|+|.++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 2 NSNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35888877777777777666 68899999999999999999999986666666654 78999999999999999988888
Q ss_pred HHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHH
Q 039263 103 NFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAF 181 (492)
Q Consensus 103 ~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~ 181 (492)
..++..+... .+ +++.+.....+.|.+.+..++.+.....++||+ +||.+.++..+..++++.+...+...+
T Consensus 82 ~~i~~~l~~~-----~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 82 MILAVAGLMF-----SH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHHHH-----cc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887654432 12 245555555666777777777777778899986 589988887777777766553332221
Q ss_pred cCCChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHH
Q 039263 182 YGDNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLV 261 (492)
Q Consensus 182 f~~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~ 261 (492)
... . .+.+..|. + . ++..++..
T Consensus 155 ~~~-------------------------~------~gw~~~f~----~-~--~~~~~~~~-------------------- 176 (394)
T PRK03699 155 LAR-------------------------S------IEWYWVYA----C-I--GLVYVAIF-------------------- 176 (394)
T ss_pred Hhc-------------------------c------ccHHHHHH----H-H--HHHHHHHH--------------------
Confidence 110 0 00011111 1 0 00000000
Q ss_pred HHHHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchh
Q 039263 262 LILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSID 341 (492)
Q Consensus 262 ~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~ 341 (492)
++..+ .+ .|++++ ++ + + + +++.. +...++.
T Consensus 177 --~~~~~----~~-----------------~p~~~~---~~----~--~-~----------~~~~~-------~~~~~~~ 206 (394)
T PRK03699 177 --ILTLF----SE-----------------FPALGK---HA----P--K-A----------DKPVA-------KEKWGIG 206 (394)
T ss_pred --HHHHh----cC-----------------Cccccc---cC----c--c-c----------cCccc-------cccCChH
Confidence 00000 00 000000 00 0 0 0 00000 0012467
Q ss_pred HHHHHHHHHhhccceeEEecchhHHHh-hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHH
Q 039263 342 MLIIFIATTCGVGGTLTAIDNLGQIGS-SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLF 420 (492)
Q Consensus 342 FWllf~~~~~~~g~Gl~~i~n~~~I~~-slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l 420 (492)
+|.+.+..++.......+.+-...+.+ .+|++..+.+..++++.+++.+||+.+|.++||+.+|+ .+.....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~------~l~~~~~~ 280 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR------ILTVLAGL 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh------HHHHHHHH
Confidence 788777666644332223334555554 46888778888899999999999999999999996542 23233333
Q ss_pred HHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc----eehhhHHHHHH
Q 039263 421 SCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG----AVASPVGAYIL 485 (492)
Q Consensus 421 ~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~----~la~~~gs~l~ 485 (492)
..+..+++.... ...+.+...+.|++.++.+++..+...|.. +++.++.++++ .++..+|+.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~p~~~ 349 (394)
T PRK03699 281 ALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KVASPKLVNFILTCGTIGTMLTFVVT 349 (394)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 333333332222 234455667779999999988888888765 45555555554 34444444443
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.72 E-value=1.6e-16 Score=163.94 Aligned_cols=148 Identities=11% Similarity=0.112 Sum_probs=119.6
Q ss_pred ccccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHH
Q 039263 23 GVLTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGS 100 (492)
Q Consensus 23 ~~~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~ 100 (492)
+..++||..+.+..+..++.+. .+..+...+++++++|+|++|.+++.....++.. ..++.|.+.||+|+|.++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~ 84 (405)
T TIGR00891 5 HLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSI 84 (405)
T ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3457899998888888888887 6888999999999999999999998655555554 4899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHH
Q 039263 101 IMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQL 177 (492)
Q Consensus 101 vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i 177 (492)
++..++..+... .+ +++.++....+.|.+.+..+.++.....+++| ++||.+.|+.....++|..+-..+
T Consensus 85 ~~~~~~~~~~~~-----~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 155 (405)
T TIGR00891 85 VLFSAGTLACGF-----AP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQV 155 (405)
T ss_pred HHHHHHHHHHHH-----hc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 888888654432 22 35666667788888888888888888899998 579999999888877776665443
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.72 E-value=2.1e-16 Score=165.76 Aligned_cols=350 Identities=14% Similarity=0.099 Sum_probs=207.9
Q ss_pred chHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 27 ~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
.||..+....+..+..+. .+..+...+.+++++|+|..|.+++.+...++..+ +++.|.+.||+|+|.++.++.++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 344555566666666666 35556677888999999999999887777777654 8899999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
++..+.... + +.|.+...-.+.|.|.+..+++......++||+ +||++.|+.....++|..+...+...+.+
T Consensus 95 ~~~~~~~~~-----~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 95 VGTGLSGLA-----S--GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHH-----h--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 887654432 2 256666666788888888888888888999985 59999999888888877665433222111
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHH
Q 039263 184 DNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLI 263 (492)
Q Consensus 184 ~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 263 (492)
. . +-+..|. +.. . .. .+
T Consensus 168 ~--------------------------~------~w~~~f~----i~~---~-~~----------------------~~- 184 (426)
T PRK12307 168 A--------------------------Y------GWRAAFF----VGL---L-PV----------------------LL- 184 (426)
T ss_pred c--------------------------C------CHHHHHH----HHH---H-HH----------------------HH-
Confidence 0 0 0011111 100 0 00 00
Q ss_pred HHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHH
Q 039263 264 LLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDML 343 (492)
Q Consensus 264 ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FW 343 (492)
.+... ...+++. .+.+ ++. +++ . + ++ + ...+....+++++++++++|
T Consensus 185 ~~~~~--~~~p~~~-~~~~---------~~~-----~~~-----~-~-~~------~---~~~~~~~~~~~~~~~~~~~~ 231 (426)
T PRK12307 185 VIYIR--ARAPESK-EWEE---------AKL-----SGK-----G-K-HS------Q---SAWSVFSLSMKGLFNRAQFP 231 (426)
T ss_pred HHHHH--HHCCCCh-HHHH---------hhh-----hcc-----c-c-cc------c---cchhhhhHHHHHHHhhchHH
Confidence 00000 0000000 0000 000 000 0 0 00 0 00000123567899999998
Q ss_pred HHHHHH---HhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHH
Q 039263 344 IIFIAT---TCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLF 420 (492)
Q Consensus 344 llf~~~---~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l 420 (492)
.....+ ++..+....+.+......++.|++..+.+...++..+++.+||+.+|.++||++||+ .+....++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~------~~~~~~~~ 305 (426)
T PRK12307 232 LTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK------TFSIGLLM 305 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH------HHHHHHHH
Confidence 655432 222222222334455566677877666777788899999999999999999996542 33333333
Q ss_pred HHHHHHHHH-hcCCchhHHHHHHHHhh--hcchhhhHHHHHHHhhcCCCcccccccc----eehhhHHHHHH
Q 039263 421 SCVGHPFIA-YGIPNSLYAASVIIGFC--FGAQWPLLFAIISEIFGLKYYSTLYNFG----AVASPVGAYIL 485 (492)
Q Consensus 421 ~~~~~ll~~-~~~~~~l~~~~~liG~~--~G~~~~~~P~i~se~FG~k~~g~nyg~~----~la~~~gs~l~ 485 (492)
..+..+.+. ........+...+.|+. ..+..++.|.++.|.|+.++.|+..|+. .++.++|+.+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 306 SFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHH
Confidence 333332222 22222233334444443 3456788999999999999889888864 33444444443
No 18
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.71 E-value=1.8e-16 Score=167.93 Aligned_cols=148 Identities=15% Similarity=0.189 Sum_probs=105.0
Q ss_pred cchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
..||..+.+..+...+... ...++...|.+++ +|+|++|.+++.....++.. ..++.|++.||+|+|..+.+|.++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 23 RLRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 3477777666665555544 4556667788876 59999999998666666664 4799999999999999999998888
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHH
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQL 177 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i 177 (492)
.++..+.... .... .+.+.++...++.|.+.+..+.+......++|| ++||++.|+.....++++.+...+
T Consensus 102 ~~~~~~~~~~--~~~~-~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l 173 (438)
T TIGR00712 102 AAVMLLMGFV--PWAT-SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLL 173 (438)
T ss_pred HHHHHHHhcc--cccc-chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHH
Confidence 8886654322 1111 224445555556677777777777777889997 579999999877777776666443
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.71 E-value=1.3e-16 Score=167.83 Aligned_cols=143 Identities=12% Similarity=-0.004 Sum_probs=109.3
Q ss_pred chHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 27 ~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
.||..+....+.-.+... .+..+.-.+++++++|+|+.|++++..+..++.. ..++.|++.||+|+|.++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 456655555554444444 5677788899999999999999998776776665 47999999999999999999999888
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHH
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQ 176 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~ 176 (492)
++..+.... ++ .+.++..-.+.|.+.+..+++......+|||+ +||++.|+.....++|..+-..
T Consensus 85 ~~~~~~~~~-----~~--~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 150 (412)
T TIGR02332 85 IASTATMFA-----TG--PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLI 150 (412)
T ss_pred HHHHHHHHh-----cC--HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887654422 32 45566666677888888777777778999995 7999999998888877665533
No 20
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.70 E-value=4.3e-16 Score=159.78 Aligned_cols=309 Identities=14% Similarity=0.078 Sum_probs=190.6
Q ss_pred cccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhH
Q 039263 46 YMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVW 124 (492)
Q Consensus 46 Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~ 124 (492)
.+++..-|++++++|+|.+|.+++.....++..+ .++.|++.||+|+|.++.+|.++..++.... ..++ .+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~------~~~~--~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR------SAPG--TA 88 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH------Hhcc--HH
Confidence 4677888999999999999999987666666654 8999999999999999999988877776432 1122 34
Q ss_pred HHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHhh
Q 039263 125 QMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVF 204 (492)
Q Consensus 125 ~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~~ 204 (492)
.+.....+.|.|.+...++.-....++||+|||++.|+.....++|..+-..+...
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~------------------------ 144 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVP------------------------ 144 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHH------------------------
Confidence 45555667777777766666666778999999999999877766666554322111
Q ss_pred hhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCCC
Q 039263 205 LRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSKK 284 (492)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~ 284 (492)
.++. . ....+..+.. .. +..++ .+ ++.. ++. + +
T Consensus 145 --l~~~------~--~~~w~~~f~~-~~--~~~~~---------------------~~-~~~~------~~~-~---~-- 177 (355)
T TIGR00896 145 --LAQH------S--GGHWQQALAW-WA--LPALL---------------------AL-LAWI------PQV-R---R-- 177 (355)
T ss_pred --HHHh------h--hhhHHHHHHH-HH--HHHHH---------------------HH-HHHh------hhh-c---c--
Confidence 0000 0 0001100000 00 00000 00 0001 100 0 0
Q ss_pred CccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecchh
Q 039263 285 PSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDNLG 364 (492)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~ 364 (492)
++++ + + + + ++.+.++++|++++|.+.+.+++....-..+.+...
T Consensus 178 -------~~~~------~-------~------------~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 221 (355)
T TIGR00896 178 -------RVAA------N-------Q------------T-T---TRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLP 221 (355)
T ss_pred -------ccCC------C-------C------------C-C---CCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0 0 0 011345788999999877655554333233344556
Q ss_pred HHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 039263 365 QIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSLYAASVIIG 444 (492)
Q Consensus 365 ~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~liG 444 (492)
++.++.|.+..+.+...++..+...+||+..|+++||+++|+ ..+.+..+++.++.+.+............++.|
T Consensus 222 ~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 296 (355)
T TIGR00896 222 AILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQR-----GIVAVLAVLQLVGLCGLLFAPMHGLWAWALVLG 296 (355)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch-----HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 677778888777888899999999999999999999985332 233344444444444333322233333566789
Q ss_pred hhhcchhhhHHHHHHHhhcC-CCcccccccc
Q 039263 445 FCFGAQWPLLFAIISEIFGL-KYYSTLYNFG 474 (492)
Q Consensus 445 ~~~G~~~~~~P~i~se~FG~-k~~g~nyg~~ 474 (492)
+++|..+.+..+.+.+.+.. ++.+..+++.
T Consensus 297 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 327 (355)
T TIGR00896 297 LGQGGAFPLALTLIGLRSRQAAQAAALSAMA 327 (355)
T ss_pred HhhhhHhHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999988888877764 4456666654
No 21
>PRK03545 putative arabinose transporter; Provisional
Probab=99.70 E-value=6.7e-16 Score=160.63 Aligned_cols=336 Identities=12% Similarity=0.047 Sum_probs=198.1
Q ss_pred cchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
++||..+..-.+.+..... .|.-+..-|++++++|+|++|++++.....++. ...++.|.+.||+|+|.+..++.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 4577655554454444433 455555679999999999999999755555554 45789999999999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
.++..+... .+ ++|.+.+.-++.|.+.+..++.+.....+++| +|||++.|+.....+++..+-..+..
T Consensus 85 ~~~~~~~~~-----~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~--- 154 (390)
T PRK03545 85 IASHVLSAL-----AW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGR--- 154 (390)
T ss_pred HHHHHHHHH-----hc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHH---
Confidence 888654432 22 25656555566777777777777777889987 58999999987777766554422211
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHH
Q 039263 183 GDNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVL 262 (492)
Q Consensus 183 ~~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 262 (492)
.+. ... +.+..|. + .. ...++... ..
T Consensus 155 -------------------~l~----~~~------gw~~~f~----~-~~-~~~~l~~~-------------------~~ 180 (390)
T PRK03545 155 -------------------VIG----QYL------GWRTTFL----A-IG-GGALITLL-------------------LL 180 (390)
T ss_pred -------------------HHH----HHh------cHHHHHH----H-HH-HHHHHHHH-------------------HH
Confidence 110 000 0011221 1 00 00000000 00
Q ss_pred HHHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhH
Q 039263 263 ILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDM 342 (492)
Q Consensus 263 ~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~F 342 (492)
. ...| ++++ + + +++ ..+.++.+|++++
T Consensus 181 ----~---~~~~-----------------~~~~----~-~--------------------~~~----~~~~~~~~~~~~~ 207 (390)
T PRK03545 181 ----I---KLLP-----------------LLPS----E-H--------------------SGS----LKSLPLLFRRPAL 207 (390)
T ss_pred ----H---HhCC-----------------CCCC----C-C--------------------cch----HHHHHHHHhCcHH
Confidence 0 0000 0000 0 0 000 1135688999999
Q ss_pred HHHHHHHHhhccceeEEecchhHHHhh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHH
Q 039263 343 LIIFIATTCGVGGTLTAIDNLGQIGSS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFS 421 (492)
Q Consensus 343 Wllf~~~~~~~g~Gl~~i~n~~~I~~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~ 421 (492)
|..+...++......+..+...++.++ .|+++.+.+...+++++.+..|++..|.++||.++| ... +...+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------~~~-~~~~~~ 280 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG------FLL-IAIALL 280 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh------HHH-HHHHHH
Confidence 977765554333222222333444444 577777778888999999999999999999987432 222 223333
Q ss_pred HHHHHHH-HhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccc----cceehhhHHHHHHh
Q 039263 422 CVGHPFI-AYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYN----FGAVASPVGAYILN 486 (492)
Q Consensus 422 ~~~~ll~-~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg----~~~la~~~gs~l~~ 486 (492)
.++..++ .... ...+.+..++.|++++.......+.+.|... ++.+.-.+ +..++.++|+.+..
T Consensus 281 ~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 281 LVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333222 2222 2345567777899888777777788888765 55555333 33445555555443
No 22
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.70 E-value=2.2e-16 Score=161.48 Aligned_cols=124 Identities=17% Similarity=0.207 Sum_probs=92.6
Q ss_pred hCcccccccccHH-HHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 039263 42 AGATYMFGLYSSD-IKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIP 119 (492)
Q Consensus 42 ~Gt~Y~fS~ys~~-L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~ 119 (492)
...-|.++.+.|+ +++++|+|+.|.+++.....++.. ..++.|.+.||+|+|.++.++.++..++..+.... ..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~--~~-- 89 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA--VQ-- 89 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--hh--
Confidence 3445889999996 999999999999998776666665 48999999999999999999999998887655432 10
Q ss_pred CchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHH
Q 039263 120 KPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGA 172 (492)
Q Consensus 120 ~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~ 172 (492)
++|.+....++.|.+.+. +..+.....+++| ++||.+.++..++..+|..
T Consensus 90 --~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 140 (366)
T TIGR00886 90 --SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGG 140 (366)
T ss_pred --hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHH
Confidence 255555555555666443 4566777889998 5799999987655444443
No 23
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.64 E-value=8.2e-15 Score=153.44 Aligned_cols=340 Identities=13% Similarity=0.103 Sum_probs=192.0
Q ss_pred cchHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
++.+...++.+..+...+..|. |-+++.+++|+|.+|.+++.+...++.. ..++.|++.||+|+|.++.++.++..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQG---WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHH---hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4555666677777777776664 3466668899999999997555555554 58999999999999999999999888
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
++..+.- ..+... .+.+.+.....+.|.|.+....+......+++| +|||++.|+..+..++|..+++++......
T Consensus 90 ~~~~~~~--~~~~~~-~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~ 166 (402)
T TIGR00897 90 VGHAAFI--VFGLGH-ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI 166 (402)
T ss_pred HHHHHHH--HHhccC-ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7754321 112211 224555555566777776665555666677775 689999999887777765555443322211
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHH
Q 039263 184 DNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLI 263 (492)
Q Consensus 184 ~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 263 (492)
+ .. +.+..+... . . +..+..+.. ..+
T Consensus 167 ~-------------------------~~------g~~~~~~~~--~--~---~~~~~~~~~---------------~~~- 192 (402)
T TIGR00897 167 P-------------------------AF------GEMNTLWSA--L--A---FVLTGGVIA---------------LFS- 192 (402)
T ss_pred c-------------------------cc------chHHHHHHH--H--H---HHHHHHHHH---------------Hhc-
Confidence 1 00 001111100 0 0 000000000 000
Q ss_pred HHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHH
Q 039263 264 LLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDML 343 (492)
Q Consensus 264 ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FW 343 (492)
.++ +++++. +++ ++ +. .+....+++.+|++.+|
T Consensus 193 ---------~~~----------------~~~~~~--~~~---------~~----------~~-~~~~~~~~~~~~~~~~~ 225 (402)
T TIGR00897 193 ---------NKD----------------IFTPQH--MQT---------RE----------KF-SELGKAATILFTNPNVL 225 (402)
T ss_pred ---------cCC----------------CCCccc--ccC---------Cc----------ch-hhHHHHHHHHHcChhHH
Confidence 000 000000 000 00 00 00011345789999999
Q ss_pred HHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHH
Q 039263 344 IIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCV 423 (492)
Q Consensus 344 llf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~ 423 (492)
.+.+..++....-....+-...+.+++|++..+.+...++..+++.+|++..|+++||++||+.. + ....+...+..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-~-~~~~l~~~~~~~ 303 (402)
T TIGR00897 226 LGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV-R-WFGGVGCGIFTL 303 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH-H-HHHHHHHHHHHH
Confidence 88776655433222222334445567788777777777888999999999999999999654311 0 111111111111
Q ss_pred HHHHHHh--cCC-chhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccccee
Q 039263 424 GHPFIAY--GIP-NSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAV 476 (492)
Q Consensus 424 ~~ll~~~--~~~-~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~l 476 (492)
...+... ... ...++..++.|++.++.... ...+.|. .++|.|+.+|+...
T Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~-~~~~~g~~~g~~~~ 357 (402)
T TIGR00897 304 ALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTL-APKHKGAAMSVLNL 357 (402)
T ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhh-CcchhHHHHHHHHH
Confidence 1111111 111 13445667778888876543 4566776 46899999997543
No 24
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.62 E-value=1e-14 Score=155.33 Aligned_cols=335 Identities=13% Similarity=0.054 Sum_probs=188.8
Q ss_pred hhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhcc
Q 039263 58 SLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANS 136 (492)
Q Consensus 58 ~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g 136 (492)
++|++..+.+.+..+..++..+ .+++|++.||+|+|.++.++.++..++..+....... ..+.+.+..++.|.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG-----GIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc-----CchHHHHHHHHHHHh
Confidence 6889999999986666666654 8999999999999999999998887776554333221 134455667788899
Q ss_pred ccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHhhhhccccccccc
Q 039263 137 QSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVFLRTFRIIKIVR 215 (492)
Q Consensus 137 ~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~ 215 (492)
.+..+.+......+||| ++||++.|+..++..+|..+-..+...+.+. . .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~----------------------~---~---- 195 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES----------------------W---G---- 195 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------------c---C----
Confidence 99999999999999998 5799999999888778777664443322110 0 0
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCCCCccccCCCCCc
Q 039263 216 QANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSKKPSLEDANSHPE 295 (492)
Q Consensus 216 ~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (492)
+-...|. +.. +..++..+ + .... .+++++. ++++ ++++
T Consensus 196 --gw~~~f~----i~~---~~~~~~~~-------------------~-~~~~-----~~~~p~~--~~~~------~~~~ 233 (465)
T TIGR00894 196 --GWPMIFY----VFG---IVGCAWSL-------------------L-WFVF-----PADDPSI--HPCI------SKFE 233 (465)
T ss_pred --CCCeehh----hhh---HHHHHHHH-------------------H-HHHH-----hcCCccc--CCCC------CHHH
Confidence 0011222 100 00000000 0 0000 0110000 0000 0000
Q ss_pred cccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecchhHHH-hhcCCCC
Q 039263 296 LKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIG-SSLGYPA 374 (492)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~-~slg~~~ 374 (492)
.+..+ + . .++ ++++. .....+++.++++++|.+++..++.......+..-+..+. +.+|++.
T Consensus 234 ~~~i~-------------~-~-~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~ 296 (465)
T TIGR00894 234 KKYIN-------------S-S-LQG-QKGST-RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSG 296 (465)
T ss_pred HHHHH-------------h-h-ccc-ccCCC-CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence 00000 0 0 000 00000 1123578999999999999877765444333333444444 3468877
Q ss_pred CccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHH----HHHHHHHHHHHHHh-cCCchh-HHHHHHHHhhhc
Q 039263 375 RSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTF----VLLFSCVGHPFIAY-GIPNSL-YAASVIIGFCFG 448 (492)
Q Consensus 375 ~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i----~~~l~~~~~ll~~~-~~~~~l-~~~~~liG~~~G 448 (492)
.+.+...++..++...++++.|+++||+.+|+...|.....+ ......+..+.... ...... .+...+.+.+.+
T Consensus 297 ~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 376 (465)
T TIGR00894 297 KENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSS 376 (465)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh
Confidence 777888889999999999999999999987755544432211 11111111111111 111122 223333344455
Q ss_pred chhhhHHHHHHHhhcCCCcccccccceehhhHHHHHHh
Q 039263 449 AQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYILN 486 (492)
Q Consensus 449 ~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l~~ 486 (492)
......-....|..+ ++.|.-.++......+|+.+..
T Consensus 377 ~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p 413 (465)
T TIGR00894 377 GPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIAS 413 (465)
T ss_pred hhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444456554 6888888887666666655543
No 25
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.61 E-value=2e-14 Score=147.68 Aligned_cols=327 Identities=15% Similarity=0.079 Sum_probs=194.0
Q ss_pred chHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFF 105 (492)
Q Consensus 27 ~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~ 105 (492)
+|+..+.+........+ ...+...-|.+++++|+|.+|.+++.....++..+ .++.|.+.||+|+|.++.++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 4 KAFALLLGCLSILGPLG-IDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFAL 82 (385)
T ss_pred hHHHHHHHHHHHHHHHH-HHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 44444444333322223 34445556889999999999999986666666654 88999999999999999999998888
Q ss_pred HHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCC
Q 039263 106 GYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGD 184 (492)
Q Consensus 106 Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~ 184 (492)
+..+.... + +++.+.....+.|.+.+..+++......+++|+ +||++.|+......++..+-..+...+.
T Consensus 83 ~~~~~~~~-----~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~-- 153 (385)
T TIGR00710 83 SSLGLALS-----N--NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL-- 153 (385)
T ss_pred HHHHHHHH-----c--cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 87654422 2 255566667788888888888888888899985 6899999988777777655433322111
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHH
Q 039263 185 NSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLIL 264 (492)
Q Consensus 185 ~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~l 264 (492)
+.. +.+..+. + .++..++.. .+
T Consensus 154 ------------------------~~~------~~~~~~~----~---~~~~~~~~~-------------------~~-- 175 (385)
T TIGR00710 154 ------------------------VWL------SWHAIFA----F---LSLAGILLS-------------------AL-- 175 (385)
T ss_pred ------------------------HHc------CHHHHHH----H---HHHHHHHHH-------------------HH--
Confidence 100 0011111 1 000000000 00
Q ss_pred HhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHH
Q 039263 265 LFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLI 344 (492)
Q Consensus 265 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWl 344 (492)
.. ...|+ ++++ ++ + + + .+....+.++.+|++++|.
T Consensus 176 --~~--~~~~~----------------~~~~-----~~----~--~-~-------------~~~~~~~~~~~~~~~~~~~ 210 (385)
T TIGR00710 176 --IF--FILPE----------------TLPY-----EA----R--I-Q-------------ISTYFETFLLLLKSKMFWG 210 (385)
T ss_pred --HH--HhCCC----------------CCCC-----cc----c--C-C-------------HHHHHHHHHHHHcCchhHH
Confidence 00 00000 0000 00 0 0 0 0000124567899999998
Q ss_pred HHHHHHhhccceeEEecchhHHHh-hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHH
Q 039263 345 IFIATTCGVGGTLTAIDNLGQIGS-SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCV 423 (492)
Q Consensus 345 lf~~~~~~~g~Gl~~i~n~~~I~~-slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~ 423 (492)
+.+...+..+.-..+......+.+ .++.++.+.+...+...+....|++..|+++||+++|+ .+.+...++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~------~~~~~~~~~~~ 284 (385)
T TIGR00710 211 YALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS------LLRMGLILFAV 284 (385)
T ss_pred HHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHH
Confidence 776554433322222222233333 56777667777788889999999999999999996543 22223333333
Q ss_pred HHHHHHh---cC--Cc-hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccc
Q 039263 424 GHPFIAY---GI--PN-SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 424 ~~ll~~~---~~--~~-~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
+.+++.. .. .. .+.....+.|++++..+...+..+.|.+. ++.++-.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 339 (385)
T TIGR00710 285 SAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASAL 339 (385)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHH
Confidence 3322211 11 11 23445667789999999999999999885 555655554
No 26
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.61 E-value=1.6e-16 Score=160.59 Aligned_cols=329 Identities=20% Similarity=0.257 Sum_probs=195.6
Q ss_pred cccccH-HHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Q 039263 48 FGLYSS-DIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQ 125 (492)
Q Consensus 48 fS~ys~-~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~ 125 (492)
+...-+ .+++++|+|..|++++.+...++.. ..++.|.+.||+|+|.++.++.++..++..+.. +. ++ .|.
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~--~~---~~--~~~ 87 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA--FA---SN--FWL 87 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH--HH---CC--HHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh--hh---hh--HHH
Confidence 334445 8899999999999998666666654 589999999999999999999999998833333 22 22 455
Q ss_pred HHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHhh
Q 039263 126 MCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVF 204 (492)
Q Consensus 126 l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~~ 204 (492)
+....++.|.+.+..+.+......+++|+ +|+++.|+......+|..+-..+...+. +
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-~-------------------- 146 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI-S-------------------- 146 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-C--------------------
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh-h--------------------
Confidence 66677788988889999999999999997 8999999998888887755533322222 1
Q ss_pred hhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCCC
Q 039263 205 LRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSKK 284 (492)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~ 284 (492)
.. +.+..|. +... .+++...+.. ... +++
T Consensus 147 -----~~------~~~~~~~----~~~~--~~~~~~il~~--------------------~~~------~~~-------- 175 (352)
T PF07690_consen 147 -----YF------GWRWAFL----ISAI--LSLIAAILFI--------------------LFL------PEP-------- 175 (352)
T ss_dssp -----HC------HHCCHHH----HHHH--HHHHHHHHHH--------------------CCC-----------------
T ss_pred -----cc------ccccccc----cccc--hhhhhhhhHh--------------------hhh------hhc--------
Confidence 00 0011222 1000 0000000000 000 000
Q ss_pred CccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecchh
Q 039263 285 PSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDNLG 364 (492)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~ 364 (492)
++++... ++ . + ++ +..+++.. + .+++..+++.+|.+++.+++....-..+.....
T Consensus 176 -------~~~~~~~-~~------~-~-~~------~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (352)
T PF07690_consen 176 -------PPPRERE-SP------K-E-SE------SKKPKPLK--P-GFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLP 230 (352)
T ss_dssp -------STTTT---SS------T-T-TT--------HHHCCC--H--CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------ccccccc-cc------c-c-cc------cccccccc--c-ccccccccchhhhhhhhhhHHHHHHHHhhcccc
Confidence 0000000 00 0 0 00 00000000 0 356778888888555544443211111223333
Q ss_pred HH-HhhcCCC-CCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc-CCchhHHHHH
Q 039263 365 QI-GSSLGYP-ARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG-IPNSLYAASV 441 (492)
Q Consensus 365 ~I-~~slg~~-~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~-~~~~l~~~~~ 441 (492)
.+ .+.++.+ ..+.+...++..+....+++..|.++||+++|+ +.........+..+...+.... .....+...+
T Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (352)
T PF07690_consen 231 LYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR---RLLIAILLLILGALGLLLLPFSSSPVWLIIALF 307 (352)
T ss_dssp HHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHH
T ss_pred hhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH---HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 33 4556776 455666678889999999999999999985432 1111122222222222111112 1234566777
Q ss_pred HHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHH
Q 039263 442 IIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAY 483 (492)
Q Consensus 442 liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~ 483 (492)
+.|+++|..+....+.+.|.+..++.|+.+|+..+..-+|..
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ 349 (352)
T PF07690_consen 308 LIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGI 349 (352)
T ss_dssp HHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999988766655544
No 27
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.60 E-value=1.6e-14 Score=153.66 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=104.3
Q ss_pred HHHHHHHHH-HHhhCcccccccccHHHHH-hhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHH
Q 039263 30 FMVFASLLI-MAVAGATYMFGLYSSDIKT-SLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFG 106 (492)
Q Consensus 30 ~~l~a~~~i-~l~~Gt~Y~fS~ys~~L~~-~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~G 106 (492)
..|..+++. .++--.-+.||.-.+++++ .+|+|.+|+.++ ++....++...++.|++.||+|||.+..++.++..++
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 344444433 3333345788888888877 799999999987 5555555555699999999999999999999998888
Q ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHH
Q 039263 107 YFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 107 y~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~ 174 (492)
..++....+...+ +++.+....++.|.+ +..+.++++...+|||+ +||++.|+..+...+|+.+.
T Consensus 114 ~~~~~~a~~~~~~--s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~ 179 (462)
T PRK15034 114 CVWLGIAVQNPNT--PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVM 179 (462)
T ss_pred HHHHHHHHcccCC--CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHH
Confidence 7655544444333 367777777777776 66788999999999995 59999999875544555544
No 28
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.60 E-value=6.1e-15 Score=149.58 Aligned_cols=331 Identities=11% Similarity=0.049 Sum_probs=196.6
Q ss_pred HHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHH
Q 039263 32 VFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFM 109 (492)
Q Consensus 32 l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~ 109 (492)
+++..+..+..+. .+..+. ..++++.+..|++++.....++.. ..++.|.+.||+|+|.++.++.++..++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPL----YVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHH
Confidence 3344444444433 234444 445578899999998666666665 4899999999999999999998887777665
Q ss_pred HHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhH
Q 039263 110 IWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKA 188 (492)
Q Consensus 110 ~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~ 188 (492)
....- .....++|.+.....+.|.+.+...++......+++| ++||++.|+......+|..+-..+...+
T Consensus 81 ~~~~~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l------- 151 (365)
T TIGR00900 81 LPFVA--LLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLM------- 151 (365)
T ss_pred HHHHH--HcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-------
Confidence 54332 1121236666666677788888888888888889998 4799999998888777765442221111
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhh
Q 039263 189 LILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLP 268 (492)
Q Consensus 189 fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p 268 (492)
.+.. +....|. +. ++..++.. +.+ ..
T Consensus 152 -------------------~~~~------g~~~~~~----~~---~~~~~~~~------------------~~~--~~-- 177 (365)
T TIGR00900 152 -------------------YATL------GIKWAIW----VD---AVGFAISA------------------LLI--VS-- 177 (365)
T ss_pred -------------------HHHh------hHHHHHH----HH---HHHHHHHH------------------HHH--Hh--
Confidence 1100 0011111 10 00000000 000 00
Q ss_pred hhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHH
Q 039263 269 IAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIA 348 (492)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~ 348 (492)
.+.+ + ++++ ++ + +.+++ .. ++.....++.+|++++|.+.+.
T Consensus 178 ----~~~~--------~------~~~~-----~~----~--~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~ 218 (365)
T TIGR00900 178 ----VRIP--------E------LAAS-----EI----Q--ALSNA------VL----RDTREGIKFVLKNPLLRTLLLL 218 (365)
T ss_pred ----cccc--------c------CCCc-----cc----c--ccchh------HH----HHHHhHHHHHHcCcHHHHHHHH
Confidence 0000 0 0000 00 0 00000 00 0001245678899999988876
Q ss_pred HHhhccceeEEecchhHHH-hh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHH
Q 039263 349 TTCGVGGTLTAIDNLGQIG-SS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHP 426 (492)
Q Consensus 349 ~~~~~g~Gl~~i~n~~~I~-~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~l 426 (492)
.++..........+..+.. +. ++.++.+.+...+..++.+.+|++..|.++||.+|| ..+.+...+..++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~ 292 (365)
T TIGR00900 219 ALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM------ALMTGAIFVIGLAIL 292 (365)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh------HHHHHHHHHHHHHHH
Confidence 6654444333332333333 33 677777777778888999999999999999987543 334444444444444
Q ss_pred HHHhcC--CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 427 FIAYGI--PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 427 l~~~~~--~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
+..... ...+++..++.|+++|.......+++.|.+..++.|+.+++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (365)
T TIGR00900 293 VVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQ 342 (365)
T ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 333322 234566777889999999999999999999988888877764
No 29
>TIGR00898 2A0119 cation transport protein.
Probab=99.60 E-value=1.5e-14 Score=155.56 Aligned_cols=346 Identities=15% Similarity=0.095 Sum_probs=196.3
Q ss_pred CcccccccccHHHHHhhCCC---hhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 039263 43 GATYMFGLYSSDIKTSLGYD---QSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRI 118 (492)
Q Consensus 43 Gt~Y~fS~ys~~L~~~~~~s---q~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i 118 (492)
+-.|.++.+.+++++++|++ +.+.+++.....+|..+ .++.|.+.||+|+|.+++++.++..++..+... .
T Consensus 103 ~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~-----~ 177 (505)
T TIGR00898 103 GWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF-----S 177 (505)
T ss_pred CcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-----c
Confidence 34577778999999999999 88888887777778765 789999999999999999998888777654332 2
Q ss_pred CCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHH
Q 039263 119 PKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLP 197 (492)
Q Consensus 119 ~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~ 197 (492)
+ +++.+.+.-++.|.+.+..+..+.....+++|+ +||.+.++...++++|..+. ++...+..+ -+..++.. ..+
T Consensus 178 ~--~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~-~~~~~~~~~-wr~~~~~~-~i~ 252 (505)
T TIGR00898 178 P--NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLL-PLVAYFIPD-WRWLQLAV-SLP 252 (505)
T ss_pred c--cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHH-HHHHHHhhH-HHHHHHHH-HHH
Confidence 2 356677777788999999889899999999985 59999988876666665443 333333221 22222222 222
Q ss_pred HHHHHhhhhcccccccc--ccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHH
Q 039263 198 AAISFVFLRTFRIIKIV--RQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKE 275 (492)
Q Consensus 198 ~~v~~~~~~~i~~~~~~--~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~ 275 (492)
.++..+...+++..|.. .+.+.++... . + .+.
T Consensus 253 ~~~~~~~~~~~~esp~~l~~~~~~~~a~~----~--------------------------------l----------~~~ 286 (505)
T TIGR00898 253 TFLFFLLSWFVPESPRWLISQGRIEEALK----I--------------------------------L----------QRI 286 (505)
T ss_pred HHHHHHHHHhcCCChHHHHHCCCHHHHHH----H--------------------------------H----------HHH
Confidence 22222222222111100 0000000000 0 0 000
Q ss_pred hhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccc
Q 039263 276 EISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGG 355 (492)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~ 355 (492)
... +..+. . ++..+.+. ++ +.+. ..+..+.+++++++++|...+...+....
T Consensus 287 ~~~------------~~~~~-~---------~~~~~~~~----~~-~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 338 (505)
T TIGR00898 287 AKI------------NGKKL-P---------AEVLSLSL----EK-DLSS-SKKQYSFLDLFRTPNLRKTTLCLMMLWFT 338 (505)
T ss_pred HHH------------cCCCC-C---------HHHHhhhh----hh-hhhh-ccCCCcHHHHhCChHHHHHHHHHHHHHHH
Confidence 000 00000 0 00000000 00 0000 01134778999999998877665443322
Q ss_pred eeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCc-
Q 039263 356 TLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPN- 434 (492)
Q Consensus 356 Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~- 434 (492)
.....+......+.++.+ ......+.++....|+++.+++.||++|| ..+.+..++..++.+++......
T Consensus 339 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr------~~~~~~~~~~~~~~l~~~~~~~~~ 409 (505)
T TIGR00898 339 TAFSYYGLVLDLGNLGGN---IYLDLFISGLVELPAKLITLLLIDRLGRR------YTMAASLLLAGVALLLLLFVPVDL 409 (505)
T ss_pred HHHHHHHHhccccccCCC---hHHHHHHHHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHcCCCc
Confidence 111111111111122221 22334566777888999999999998544 44555555556555544333222
Q ss_pred --hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 435 --SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 435 --~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
.......+.+++.++.+.+...+++|.|.+++-++-.|+.....-+|
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig 458 (505)
T TIGR00898 410 YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVG 458 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHH
Confidence 23444556678888889999999999999887777666644333333
No 30
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.59 E-value=4.3e-14 Score=147.04 Aligned_cols=314 Identities=15% Similarity=0.045 Sum_probs=177.6
Q ss_pred ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
-+.|+..-|++++++|+|.+|++++..+..++.. ..++.|.+.||+|+|.++. +++.....-.+ . .... + ++
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~~~~~-~-~~~~--~--~~ 79 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLF-GSLATFAAAAG-R-LLDP--F--NY 79 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH-HHHHHHHHHHH-H-HHHh--c--cH
Confidence 3567888899999999999999998766666654 4799999999999888654 55444433111 1 1111 1 25
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISF 202 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~ 202 (492)
+.+...-++.|.|.+. +.++.....+||| ++||++.++......+|+.+-..+...
T Consensus 80 ~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~---------------------- 136 (368)
T TIGR00903 80 EWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLK---------------------- 136 (368)
T ss_pred HHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 5566666777888775 4555566688887 579999999988888876665222111
Q ss_pred hhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccC
Q 039263 203 VFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKS 282 (492)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~ 282 (492)
.... .+-+..|. + . ++..++.. .+..... ||
T Consensus 137 ----l~~~------~gWr~~f~----~-~--~~l~~~~~-------------------~~~~~~l------p~------- 167 (368)
T TIGR00903 137 ----IYTA------GGLQLLII----P-I--AAVAAAGI-------------------ILVLAAL------PA------- 167 (368)
T ss_pred ----HHHc------cchHHHHH----H-H--HHHHHHHH-------------------HHHHHHc------CC-------
Confidence 1110 01111111 1 0 00000000 0000001 10
Q ss_pred CCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecc
Q 039263 283 KKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDN 362 (492)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n 362 (492)
+|++. ++. . + .++ ....++|.+|++++|.+++.+++....-..+.+=
T Consensus 168 ---------~p~~~---~~~-------~-~----------~~~---~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~w 214 (368)
T TIGR00903 168 ---------LPFQA---AEG-------F-G----------FKD---AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIW 214 (368)
T ss_pred ---------CCCCC---CCC-------c-c----------hHH---HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000 0 0 000 0013678999999999998888866553333333
Q ss_pred hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHH
Q 039263 363 LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASV 441 (492)
Q Consensus 363 ~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~ 441 (492)
+.++.++.|++. +.+...++..+ .|-+..++++||..||. .|........+++.+..+++.... .........
T Consensus 215 lp~~L~~~g~s~-~~~~~~~l~~~---~g~~g~~~~~d~~~r~~--~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 288 (368)
T TIGR00903 215 LEAALRPAGLED-IAGDAVALAIL---AGLIGVAVIPDRVARAG--LRSIYIRAAALLIAAFFLALAFELNRLALFAFIG 288 (368)
T ss_pred HHHHHHHCCCCh-HHHHHHHHHHH---HHHHHHHHhhHHhhhhh--hHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 666666667653 23334444444 45555699999997653 233323222333333333332222 222334445
Q ss_pred HHHhhhcchhhhHHHHHHHhhcCCCccccccccee
Q 039263 442 IIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAV 476 (492)
Q Consensus 442 liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~l 476 (492)
+.+++.++.++++.++.+|.|.+++-|+-.|+...
T Consensus 289 l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~ 323 (368)
T TIGR00903 289 IAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGF 323 (368)
T ss_pred HHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhH
Confidence 56777778888888999999998887877777544
No 31
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.58 E-value=4.3e-14 Score=150.44 Aligned_cols=373 Identities=15% Similarity=0.086 Sum_probs=209.4
Q ss_pred ccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Q 039263 47 MFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQ 125 (492)
Q Consensus 47 ~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~ 125 (492)
..+...|++++++|.|+.+.+++.+...++..+ .++.|++.||+|+|.++++|.++..++..+.. ..+ +.+.
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-----~~~--~~~~ 92 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG-----VAP--NLEL 92 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh-----CcC--CHHH
Confidence 455678999999999999999986666666654 78999999999999999999998888875433 223 2566
Q ss_pred HHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHh
Q 039263 126 MCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGD-NSKALILLIAWLPAAISFV 203 (492)
Q Consensus 126 l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~-~~~~fllfla~~~~~v~~~ 203 (492)
+...-++.|.+.+...+.+.....+++| ++||++.|+......+++.+-..+...+.+. +-..-++..+....+..++
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~ 172 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVV 172 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHH
Confidence 6667778888888888888888899997 6799999998777777766555444433332 1111122222222222222
Q ss_pred hhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcc-cccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccC
Q 039263 204 FLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNK-YAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKS 282 (492)
Q Consensus 204 ~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~ 282 (492)
.....+..+++++++.+. .. ......+............ .+..++...... ...-.........+ |.
T Consensus 173 ~~~~~~~~~~~~~~~~d~-~g---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~----- 240 (485)
T TIGR00711 173 AFFILPRDKPAASENFDF-LG---LLLLSVGLGSLLYGLSEGPERGWFDSNEILIL--SITGLVAIIAFVVW-EL----- 240 (485)
T ss_pred HHHHcCCccccccCCCcH-HH---HHHHHHHHHHHHHHHhhCCCCCCCCchHHHHH--HHHHHHHHHHHHHH-HH-----
Confidence 222222211111110011 00 0000000000000000000 000000000000 00000000000000 00
Q ss_pred CCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecc
Q 039263 283 KKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDN 362 (492)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n 362 (492)
..++| ....+.+|+++||...+..++....-....+.
T Consensus 241 --------------------------------------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (485)
T TIGR00711 241 --------------------------------------TDDNP-----LVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYL 277 (485)
T ss_pred --------------------------------------cCCCC-----ccCHHHHcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 00001 11246788999988766554432221112223
Q ss_pred hhHHHhh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHh--cCC---chh
Q 039263 363 LGQIGSS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAY--GIP---NSL 436 (492)
Q Consensus 363 ~~~I~~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~--~~~---~~l 436 (492)
..+..+. +|+++.+++.......+...+|+++.|.+.||++|| ..+.+...++.++.+++.. ... ..+
T Consensus 278 ~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (485)
T TIGR00711 278 LPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR------KLVTIGLILYAVGFYWRAFTFTPDTPFLAI 351 (485)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH------HHHHHHHHHHHHHHHHHhccCCCCCCHHHH
Confidence 3444443 677777777788888999999999999999998543 3455555666666554431 111 134
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc----eehhhHHHHHHhh
Q 039263 437 YAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG----AVASPVGAYILNV 487 (492)
Q Consensus 437 ~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~----~la~~~gs~l~~~ 487 (492)
.....+.|++.|..+......+.|.++.++.|+-.++. .++..+|+.+...
T Consensus 352 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 352 ALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999998877778888889888888877764 3445555554443
No 32
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.57 E-value=1.9e-13 Score=142.21 Aligned_cols=127 Identities=13% Similarity=0.046 Sum_probs=91.6
Q ss_pred cccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHH-hcCCCCc
Q 039263 44 ATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAV-TGRIPKP 121 (492)
Q Consensus 44 t~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~-~g~i~~~ 121 (492)
.....++....+++++|+|..+++.+..+..++.. ..++.|.+.||+|+|.++.++.++..++........ .+.....
T Consensus 31 ~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (399)
T PRK05122 31 IGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVL 110 (399)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchh
Confidence 44455567777899999999999998666666665 489999999999999999999888777765443321 1211111
Q ss_pred hhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhh
Q 039263 122 QVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLS 170 (492)
Q Consensus 122 ~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLs 170 (492)
.++.+....++.|.|.+..+.++.....+++| ++||++.|+......+|
T Consensus 111 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 160 (399)
T PRK05122 111 SLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGA 160 (399)
T ss_pred HHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHH
Confidence 23445556678888888888888777788886 67999999865544433
No 33
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.56 E-value=3.8e-14 Score=148.60 Aligned_cols=149 Identities=14% Similarity=0.054 Sum_probs=102.9
Q ss_pred cchHHHHHHHHHHHHhhC---c-ccccccccHHHHHhhCCC--------hhhhhHHHHHhhhhcc-ccccceeeeccCCc
Q 039263 26 TGRWFMVFASLLIMAVAG---A-TYMFGLYSSDIKTSLGYD--------QSTLNLLSFSKDVGGN-VGVLSGLINEITPP 92 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~G---t-~Y~fS~ys~~L~~~~~~s--------q~~l~~is~~~~vg~~-~~~~~G~~~D~~Gp 92 (492)
.++|.......++.++.. . ....+..-++++++++++ +.|.+++.....++.. ..++.|.+.||+||
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr 100 (481)
T TIGR00879 21 STYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGR 100 (481)
T ss_pred cccHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhh
Confidence 344554444444433311 1 223344455666677666 8888888666666664 58999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhH
Q 039263 93 WVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSG 171 (492)
Q Consensus 93 r~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa 171 (492)
|.+++++.++..+|..+... .... .+.|.+.....+.|.|.+..+........+++| ++||++.++...+..+|.
T Consensus 101 r~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 176 (481)
T TIGR00879 101 KKSLLIIALLFVIGAILMGL--AAFA--LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGI 176 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hccc--cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHH
Confidence 99999999988888654432 1221 224556667778888989888888888899997 579999999887777777
Q ss_pred HHHHHHH
Q 039263 172 AILTQLY 178 (492)
Q Consensus 172 ~i~s~i~ 178 (492)
.+-..+.
T Consensus 177 ~~~~~~~ 183 (481)
T TIGR00879 177 LVAYGFG 183 (481)
T ss_pred HHHHHHH
Confidence 6665544
No 34
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.56 E-value=4e-13 Score=143.86 Aligned_cols=155 Identities=14% Similarity=0.195 Sum_probs=116.2
Q ss_pred cccccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHH
Q 039263 22 VGVLTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIG 99 (492)
Q Consensus 22 ~~~~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG 99 (492)
++..++||..+.+..+..+..+. .+..+...|++++++|+|+.+.+.+.....++..+ .++.|.+.||+|+|.+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 91 (496)
T PRK03893 12 RHLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVIS 91 (496)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 34445677766666666665555 35666778999999999999999876666666654 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHH
Q 039263 100 SIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLY 178 (492)
Q Consensus 100 ~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~ 178 (492)
.++..++..++... + ++|.+.....+.|.+.+..+.+......++||+ +||++.|+......+|+.+-..+.
T Consensus 92 ~~~~~~~~~~~~~~-----~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 164 (496)
T PRK03893 92 IVLFSVGTLACGFA-----P--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVY 164 (496)
T ss_pred HHHHHHHHHHHHHH-----h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888887654432 2 356666666777888888888888888899985 689999998887777776665555
Q ss_pred HHHcC
Q 039263 179 HAFYG 183 (492)
Q Consensus 179 ~~~f~ 183 (492)
..+.+
T Consensus 165 ~~l~~ 169 (496)
T PRK03893 165 SLVVP 169 (496)
T ss_pred HHHhc
Confidence 54443
No 35
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.56 E-value=1.8e-13 Score=143.29 Aligned_cols=143 Identities=10% Similarity=0.037 Sum_probs=106.0
Q ss_pred ccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIM 102 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl 102 (492)
.++-|..+.+......+.++ .|.-.-.-|++++++|+|.+|.+.+.....++. ...++.|.+.||+|+|.+..++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 34456665555555555555 565555788999999999999998644444444 4588999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHH
Q 039263 103 NFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 103 ~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~ 174 (492)
..+++.+.... + ++|.+...-.+.|.+.+..+..+.....++|| ++||++.|+..+..++|..+-
T Consensus 95 ~~~~~~~~~~~-----~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig 160 (394)
T PRK10213 95 LTLSCLLVSFA-----N--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA 160 (394)
T ss_pred HHHHHHHHHHH-----C--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 88886543221 2 35667666677888888888888888889997 568999999888777765544
No 36
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.54 E-value=1.4e-13 Score=145.10 Aligned_cols=336 Identities=11% Similarity=0.044 Sum_probs=200.5
Q ss_pred HHHHhhCccccc-ccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHH
Q 039263 37 LIMAVAGATYMF-GLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAV 114 (492)
Q Consensus 37 ~i~l~~Gt~Y~f-S~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~ 114 (492)
...+..|..+.. +..-|++++++|+|..|.+++.....++..+ +++.|++.||+|+|.++.+|.++..+|..++...
T Consensus 10 ~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~- 88 (410)
T TIGR00885 10 SLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA- 88 (410)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-
Confidence 334444554444 3677999999999999999987777777764 8999999999999999999999999997654322
Q ss_pred hcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhH-HHHH
Q 039263 115 TGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKA-LILL 192 (492)
Q Consensus 115 ~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~-fllf 192 (492)
...+ +++.+....++.|.|.+..+++.-....+..|+ +|+...++..++.++|+.+-..+...++..+... -..
T Consensus 89 -~~~~--~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~- 164 (410)
T TIGR00885 89 -AEIM--NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD- 164 (410)
T ss_pred -Hhhc--cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh-
Confidence 2222 356666677888999999988777777778875 5898999988999888877655544443211000 000
Q ss_pred HHHHHHHHHHhhhhcccccccccc---chhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhh
Q 039263 193 IAWLPAAISFVFLRTFRIIKIVRQ---ANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPI 269 (492)
Q Consensus 193 la~~~~~v~~~~~~~i~~~~~~~~---~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~ 269 (492)
...+..+..++ +.+....+ . .|+++..+. +.+.++..
T Consensus 165 -------------~~~~~~~~~~~~~~~~~~~~w~-~--------~fl~~a~~~----------------~~~~~~~~-- 204 (410)
T TIGR00885 165 -------------VLDKLSPEELSAIKHSDLASVQ-T--------PYMIIGAVV----------------LAVALLIM-- 204 (410)
T ss_pred -------------hhhhcCHHHHHHHHHHHHHHHH-H--------HHHHHHHHH----------------HHHHHHHH--
Confidence 00000000000 00111111 1 111111000 00000000
Q ss_pred hhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHH
Q 039263 270 AIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIAT 349 (492)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~ 349 (492)
..+ .|+. +. ++ + ++++ . ..+.++.+|++++|...+..
T Consensus 205 --~~~-----------------~p~~-~~-~~----------~---------~~~~-~--~~~~~~~~~~~~~~~~~l~~ 241 (410)
T TIGR00885 205 --LTK-----------------MPAL-NH-SD----------A---------KQIS-F--SASLSRLARIRHYREGVIAQ 241 (410)
T ss_pred --Hhc-----------------CCCC-Cc-cc----------c---------cccc-c--hhhHHHHHhChhHHHHHHHH
Confidence 000 0000 00 00 0 0000 0 11345788999999988877
Q ss_pred HhhccceeEEecchhHHHhhcCC--CCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHH
Q 039263 350 TCGVGGTLTAIDNLGQIGSSLGY--PARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPF 427 (492)
Q Consensus 350 ~~~~g~Gl~~i~n~~~I~~slg~--~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll 427 (492)
++-.|......++.....+..+. ++..++...+..-..-.+||+++|++.||+.+|+ .+.+..+...+.+++
T Consensus 242 f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~------~l~i~~~~~~~~~ll 315 (410)
T TIGR00885 242 FFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK------VLMAYAIIGMALCLG 315 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHH
Confidence 77777665555566666655432 2222344555555777999999999999995432 344444455555444
Q ss_pred HHhcCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCC
Q 039263 428 IAYGIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKY 466 (492)
Q Consensus 428 ~~~~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~ 466 (492)
....+........+++|++.+.+|++.-++..+..|.+.
T Consensus 316 ~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~ 354 (410)
T TIGR00885 316 SIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT 354 (410)
T ss_pred HHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 444333344667778899999999999999999998443
No 37
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=1.6e-13 Score=137.72 Aligned_cols=295 Identities=20% Similarity=0.250 Sum_probs=201.9
Q ss_pred ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
.+.++.+.+.+.+++|.++.|.+.+.....++..+ .++.|.+.||+|+|..+.++.++..++....... + +.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~--~~ 87 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-----S--SL 87 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-----c--cH
Confidence 56788888999999999999999987777777654 8999999999999999999999999998766543 2 25
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISF 202 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~ 202 (492)
+.+.....+.|.+.+..+.+......+++|+ +|+++.++......+++.+-..+...+.+...-
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------------- 152 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGW--------------- 152 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH---------------
Confidence 6666677788888888888888889999996 899999998888777766654433322211000
Q ss_pred hhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccC
Q 039263 203 VFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKS 282 (492)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~ 282 (492)
+..+. +. ++..++..+ .. ...
T Consensus 153 -----------------~~~~~----~~---~~~~~~~~~------------------~~--~~~--------------- 173 (352)
T cd06174 153 -----------------RWLFL----IL---AILGLLLAL------------------LL--LFL--------------- 173 (352)
T ss_pred -----------------HHHHH----HH---HHHHHHHHH------------------HH--HHH---------------
Confidence 01111 10 000000000 00 000
Q ss_pred CCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecc
Q 039263 283 KKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDN 362 (492)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n 362 (492)
+ +++|.+.+..++.......+...
T Consensus 174 ------------------------------------------~--------------~~~~~~~~~~~~~~~~~~~~~~~ 197 (352)
T cd06174 174 ------------------------------------------L--------------RLLLLLALAFFLLSFGYYGLLTY 197 (352)
T ss_pred ------------------------------------------H--------------HHHHHHHHHHHHHHhHHHHHHHH
Confidence 0 45555555555544443334444
Q ss_pred hhHHHhhc-CCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHH
Q 039263 363 LGQIGSSL-GYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAAS 440 (492)
Q Consensus 363 ~~~I~~sl-g~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~ 440 (492)
..++.++. +.++.+.+...+...+.+..|++.+|.++||.+||++ .+.+...+..++.+...... ...+++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (352)
T cd06174 198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL-----LLLIGLLLAALGLLLLALAPSLALLLVAL 272 (352)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 44444443 6666666777889999999999999999999976532 44455555566555443333 33567788
Q ss_pred HHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 441 VIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 441 ~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
.+.|++.+..+...++.+.|.+..++.++.+++......+|
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLG 313 (352)
T ss_pred HHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999899998888765444333
No 38
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.52 E-value=5.4e-13 Score=143.87 Aligned_cols=378 Identities=11% Similarity=0.023 Sum_probs=210.7
Q ss_pred chHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 27 ~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
++|..+++..+..+.... .-.-++--|++.+++|.++.|.+++.++..++.. ..++.|++.||+|+|.++++|.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 567766665555555544 4455666899999999999999998666666654 57899999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC--CCCCceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP--ESRGSVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP--~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
+|..+.. ..++ .|.+...-.+.|.|.+..+.++.....++|+ ++||++.|+.....++|..+-..+ ..++
T Consensus 83 ~~~~~~~-----~a~~--~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~l-gg~l 154 (495)
T PRK14995 83 LASLAAA-----FSPT--ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLV-GGIL 154 (495)
T ss_pred HHHHHHH-----HcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHh
Confidence 8875433 2233 5666666677788888877777777779984 479999999988888776554444 4444
Q ss_pred CCCh--hHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHH
Q 039263 183 GDNS--KALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASL 260 (492)
Q Consensus 183 ~~~~--~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 260 (492)
.+.. +.-++.......+..++...+++..|.++++ +. .+... .....+.........+.. + +..........
T Consensus 155 ~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~-~~-d~~g~--~~~~~~~~~l~~~~~~~~-~-~~~~~~~~~~~ 228 (495)
T PRK14995 155 LEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQ-PL-NLGHA--LMLIVAILLLVYSAKTAL-K-GFLSLWVTSLT 228 (495)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC-CC-ChHhH--HHHHHHHHHHHHHHHhcc-c-cCCchHHHHHH
Confidence 3322 2222222211212222222222221111110 00 00000 000011111111111110 0 00000000000
Q ss_pred HHHHHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcch
Q 039263 261 VLILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSI 340 (492)
Q Consensus 261 ~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~ 340 (492)
+++-........ ..|.+ .++| .-.++++|++
T Consensus 229 ~~~~~~~l~~f~-~~e~~-------------------------------------------~~~p-----~~~~~lf~~~ 259 (495)
T PRK14995 229 LLTGALLLGLFI-RTQLA-------------------------------------------ASRP-----MIDMRLFTHR 259 (495)
T ss_pred HHHHHHHHHHHH-HHHhc-------------------------------------------CCCC-----CcCHHHhCCc
Confidence 000000000000 10000 0001 1115788889
Q ss_pred hHHHHHHHHHhhccceeEEecchhHHHh-hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 341 DMLIIFIATTCGVGGTLTAIDNLGQIGS-SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 341 ~FWllf~~~~~~~g~Gl~~i~n~~~I~~-slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
.|+...+..++....-........+..| ..|+++.+++......++...++.++.|.+.||+++| ..+....+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~------~~~~~g~~ 333 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR------LVATGGMA 333 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch------HHHHHHHH
Confidence 9887766555533221111112222333 3688877888888889999999999999999999643 23444455
Q ss_pred HHHHHHHHHHh-c--CCc-hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccc
Q 039263 420 FSCVGHPFIAY-G--IPN-SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 420 l~~~~~ll~~~-~--~~~-~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
++.++..++.. . ... ..+...++.|++.|..+......+.+....++.+.-.+.
T Consensus 334 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~ 391 (495)
T PRK14995 334 LSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAI 391 (495)
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHH
Confidence 55555433322 1 122 345667788999998888777777888877777765555
No 39
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.52 E-value=2.4e-13 Score=140.11 Aligned_cols=320 Identities=14% Similarity=0.159 Sum_probs=200.7
Q ss_pred ccccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
=+.||.-.+++++.+|+|..|..++ ++-...|+.+=++-|++.||+|||.+..++.++..+= .+|+.+...-++ +
T Consensus 30 W~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP--~~~~~~a~~~~~--~ 105 (417)
T COG2223 30 WTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP--CLGLAFAVTYPS--T 105 (417)
T ss_pred HHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH--HHHHHHHccCCc--h
Confidence 4677888899999999999999996 8888888888999999999999999999898887766 344455555443 5
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISF 202 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~ 202 (492)
|++...+.+.|.+ |..+..++....+|||+ |+|+|.||--++. +|.++... +.|.++..
T Consensus 106 ~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g~GN-~G~av~q~------------------~~P~v~~~ 165 (417)
T COG2223 106 WQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAGAGN-LGVAVAQL------------------VAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhcccc-ccHHHHHH------------------HHHHHHHH
Confidence 8888887777765 34456889999999985 6899999976333 44444422 13433322
Q ss_pred hhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccC
Q 039263 203 VFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKS 282 (492)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~ 282 (492)
.+.-.. +... .+|+....+.. + ++-. ..+
T Consensus 166 ~g~~~w-----------~~~~----------~i~~~~l~v~~-----------------v--~~~~---~~~-------- 194 (417)
T COG2223 166 FGFLAW-----------RNVA----------GIYVVALAIAA-----------------V--LAWL---GMN-------- 194 (417)
T ss_pred HhhHHH-----------HHHH----------HHHHHHHHHHH-----------------H--HHHH---HhC--------
Confidence 221000 0000 11111111100 0 0000 000
Q ss_pred CCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecc
Q 039263 283 KKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDN 362 (492)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n 362 (492)
|.++... . .++.. +...+...+++|-|.+-+.++..-|+=+-+.+-
T Consensus 195 ---------d~p~~r~---~--------------------~~~~~--~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~ 240 (417)
T COG2223 195 ---------DVPEHRA---S--------------------VKPQL--PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAY 240 (417)
T ss_pred ---------CChhhhc---c--------------------ccccc--hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0 00000 123456788999999999888877775555566
Q ss_pred hhHHHhh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-------Cc
Q 039263 363 LGQIGSS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-------PN 434 (492)
Q Consensus 363 ~~~I~~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-------~~ 434 (492)
..+..++ .|.+..+++...+++...+.+-|...|.+|||++.+| . +.+.+..++++...+...+ +.
T Consensus 241 l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r-----v-~~~~f~~~~~~~~~l~~~~~~~~~~~~~ 314 (417)
T COG2223 241 LPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR-----V-TLAVFVGMALAAALLSLFLTGFGHGGSF 314 (417)
T ss_pred HHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchh-----H-HHHHHHHHHHHHHHHHccccccccCcch
Confidence 6666664 5777777788999999999999999999999997543 2 3334444555444332221 11
Q ss_pred h-----hHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHH
Q 039263 435 S-----LYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYI 484 (492)
Q Consensus 435 ~-----l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l 484 (492)
. +....+..|++.|+.|-..|.+-.+ +.|.-=|++.....+|.+.
T Consensus 315 ~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-----~~G~v~G~vga~G~lGGf~ 364 (417)
T COG2223 315 VVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-----ETGAVTGIVGAIGGLGGFF 364 (417)
T ss_pred HHHHHHHHHHHHHhccCcchheeechHHHHh-----hhhHHHHHHHHhccccccc
Confidence 1 2333445588889999999988775 5555555555555555433
No 40
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.51 E-value=2.4e-13 Score=141.16 Aligned_cols=295 Identities=12% Similarity=0.050 Sum_probs=171.9
Q ss_pred ccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Q 039263 47 MFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQ 125 (492)
Q Consensus 47 ~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~ 125 (492)
....+-|++++++|+|.+|.+++.....++..+ .++.|++.||+|+|.++.+|.++..+++.+... .++ +|.
T Consensus 24 ~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~-----~~~--~~~ 96 (381)
T PRK03633 24 VLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL-----MVG--FWS 96 (381)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcc--HHH
Confidence 344668888899999999999987777777654 889999999999999999999988888754332 222 555
Q ss_pred HHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHhh
Q 039263 126 MCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVF 204 (492)
Q Consensus 126 l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~~ 204 (492)
+.+...+.|.+.+...........++.| ++||++.|+......+|..+-..+...+.+.
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------------------- 156 (381)
T PRK03633 97 WLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE-------------------- 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------------------
Confidence 5556677787777665554444455554 6899999987776666655543322211110
Q ss_pred hhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCCC
Q 039263 205 LRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSKK 284 (492)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~ 284 (492)
..+ ...+. ..+. ... .+ +.... +.
T Consensus 157 --~~~----------~~~~~----~~~~-----~~~--------------------~~-----~~~~~-~~--------- 180 (381)
T PRK03633 157 --LMS----------VLPWV----TGLV-----LAA--------------------IL-----PLLFT-RI--------- 180 (381)
T ss_pred --ccc----------hHHHH----HHHH-----HHH--------------------HH-----HHHHh-cc---------
Confidence 000 00000 0000 000 00 00000 00
Q ss_pred CccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHh-hccceeEEecch
Q 039263 285 PSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTC-GVGGTLTAIDNL 363 (492)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~-~~g~Gl~~i~n~ 363 (492)
++++ + + +++ +.+.++.+|++.||......+. +...+.. .+-+
T Consensus 181 -------~~~~------~---------~----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 223 (381)
T PRK03633 181 -------LNQQ------A---------E----------NHD----STSIWPMLKLRQARLGVNGCIISGIVLGSL-YGLM 223 (381)
T ss_pred -------cCCC------C---------C----------CCC----CCCHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHH
Confidence 0000 0 0 000 1134677888888875442222 1111111 1123
Q ss_pred hHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH
Q 039263 364 GQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSLYAASVII 443 (492)
Q Consensus 364 ~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~li 443 (492)
....+..|.++.+.+..+++..+.+..||+..|++.||+++| ..+.....++.++.+++. ..........+.
T Consensus 224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~------~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l~ 295 (381)
T PRK03633 224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL------LVLRVQVFVVILGSIAML--SQAAMAPALFIL 295 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH------HHHHHHHHHHHHHHHHHh--hhHHHHHHHHHH
Confidence 444556677766677888999999999999999999999554 334444444444443322 122333455566
Q ss_pred HhhhcchhhhHHHHHHHhhcCCCccc
Q 039263 444 GFCFGAQWPLLFAIISEIFGLKYYST 469 (492)
Q Consensus 444 G~~~G~~~~~~P~i~se~FG~k~~g~ 469 (492)
|++.+..+....+.+.|....++.+.
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~ 321 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVA 321 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHH
Confidence 77766666666666778876655443
No 41
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=7.7e-13 Score=137.50 Aligned_cols=126 Identities=11% Similarity=-0.039 Sum_probs=87.5
Q ss_pred ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHH-HhcCCCCch
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLA-VTGRIPKPQ 122 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~-~~g~i~~~~ 122 (492)
....++....+++++|+|.+|++++..+..++.. ..++.|.+.||+|+|.++++|.+...++.....+. ........+
T Consensus 32 ~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (392)
T PRK12382 32 GLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFK 111 (392)
T ss_pred HHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHH
Confidence 3444556667899999999999998555555554 58999999999999999998887766553222111 111111123
Q ss_pred hHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhh
Q 039263 123 VWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLS 170 (492)
Q Consensus 123 ~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLs 170 (492)
++.+...-.+.|.|.+...++......+++| ++||++.|+......++
T Consensus 112 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g 160 (392)
T PRK12382 112 FALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGA 160 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHH
Confidence 4555556677888888888888777888997 67999999865444333
No 42
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.51 E-value=4.9e-13 Score=138.94 Aligned_cols=122 Identities=7% Similarity=-0.031 Sum_probs=92.2
Q ss_pred cccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhH
Q 039263 46 YMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVW 124 (492)
Q Consensus 46 Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~ 124 (492)
+..+..-|++++++|+|.+|.+++.....++... .++.|++.||+|+|.++.++.++..++..+... .+ +.|
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~-----~~--~~~ 92 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL-----SS--SYL 92 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH-----hC--cHH
Confidence 4555677999999999999999987767777765 789999999999999999999988888654332 22 256
Q ss_pred HHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHH
Q 039263 125 QMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 125 ~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~ 174 (492)
.+....++.|.+.+...........+++|+ +|+.+.|+..+...++..+-
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 143 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLG 143 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHh
Confidence 666666778887777666556667789986 68888887666655555444
No 43
>PRK10504 putative transporter; Provisional
Probab=99.51 E-value=1.5e-12 Score=138.79 Aligned_cols=361 Identities=8% Similarity=-0.011 Sum_probs=194.8
Q ss_pred cccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCch
Q 039263 44 ATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQ 122 (492)
Q Consensus 44 t~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~ 122 (492)
..+.++.+-|.+.+++|+|+.+.+++.....++. ...++.|++.||+|+|.+.+++.++..+++.+.. + .+ +
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~--~---~~--~ 97 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCA--L---SG--T 97 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH--H---hC--C
Confidence 3456677889999999999999888755555654 3578999999999999999988888777765422 1 12 2
Q ss_pred hHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHH
Q 039263 123 VWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGD-NSKALILLIAWLPAAI 200 (492)
Q Consensus 123 ~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~-~~~~fllfla~~~~~v 200 (492)
.+.+....++.|.|.+...........+++|+ +||++.|+......+++.+-..+...+.+. +-..-+........+.
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~ 177 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIG 177 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 45566666778888887777777778899985 689998887766666665544443333321 1122222222111111
Q ss_pred HHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhc
Q 039263 201 SFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLR 280 (492)
Q Consensus 201 ~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~ 280 (492)
.++.....+..+.++.+.+..... .. ..+...+.....++. . ............+..+.. ......+|
T Consensus 178 ~~~~~~~~~~~~~~~~r~~~~~~~---~~--~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~~~~~~~---- 245 (471)
T PRK10504 178 AIATLMLMPNYTMQTRRFDLSGFL---LL--AVGMATLTLALDGSK-G-LGLSPLAIAGLVAVGVVA-LLLYLLHA---- 245 (471)
T ss_pred HHHHHHhCCCccccCCCCChHHHH---HH--HHHHHHHHHHHhcCC-c-CCcchHHHHHHHHHHHHH-HHHHHHHH----
Confidence 111111111111000000000000 00 001111111111110 0 000000000000000000 00001100
Q ss_pred cCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEe
Q 039263 281 KSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAI 360 (492)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i 360 (492)
++ + ++| .-..+.+|+++|+......++.... ....
T Consensus 246 ------------~~-------~--------------------~~~-----~~~~~l~~~~~~~~~l~~~~~~~~~-~~~~ 280 (471)
T PRK10504 246 ------------RN-------N--------------------NRA-----LFSLKLFRTRTFSLGLAGSFAGRIG-SGML 280 (471)
T ss_pred ------------hc-------C--------------------CCC-----ccCHHHhcccchHHHHHHHHHHHHH-HHHH
Confidence 00 0 000 1113578999999887766654332 2223
Q ss_pred cchh-HHHh-hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc-CCc---
Q 039263 361 DNLG-QIGS-SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG-IPN--- 434 (492)
Q Consensus 361 ~n~~-~I~~-slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~-~~~--- 434 (492)
+... +..+ .+|.++...+.......+....++.++|.++||++|| ..+.+..+++.+..+++... ...
T Consensus 281 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
T PRK10504 281 PFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR------RVLVATTLGLALVSLLFMLVALLGWYY 354 (471)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch------HHHHHHHHHHHHHHHHHHhccccccHH
Confidence 3333 3334 3677666666677777888888999999999998543 23444444444443333221 112
Q ss_pred hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 435 SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 435 ~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
.+.+...+.|++.|..++....++.+.+..++.|..+++.
T Consensus 355 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 394 (471)
T PRK10504 355 LLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLL 394 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHH
Confidence 1234456678888888888899999999988888887774
No 44
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.49 E-value=8.7e-13 Score=137.10 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=97.6
Q ss_pred chHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFF 105 (492)
Q Consensus 27 ~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~ 105 (492)
||..........+-..| .+.+..+-|++++++|.|..+.+++.....++..+ .++.|++.||+|+|..+++|.++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 2 SRFLLCSFALVLLYPAG-IDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred chHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH
Confidence 56554333333333222 34444789999999999999998876666666654 78999999999999999999998888
Q ss_pred HHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhH
Q 039263 106 GYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSG 171 (492)
Q Consensus 106 Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa 171 (492)
++.+.... + +.+.+.....+.|.+.+..+........+++| ++|+++.|+..+...+++
T Consensus 81 ~~~~~~~~-----~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~ 140 (392)
T PRK10473 81 ASLLCSLA-----E--TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIP 140 (392)
T ss_pred HHHHHHHh-----C--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 87654422 2 24445555566778888777777778889997 579999888765554443
No 45
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.48 E-value=7.3e-13 Score=139.29 Aligned_cols=336 Identities=12% Similarity=0.048 Sum_probs=172.3
Q ss_pred cchHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
++-|...+.-.+..++.| ..++.++..+++++|+|+.|++++ +..........++.|++.||+|+|.++.++.....
T Consensus 10 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWS--SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred cchHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 355555555555555444 357888889999999999999997 54444444569999999999999999877666554
Q ss_pred HHHHHHHH-HHhcCCCCchhHHHHHHHHHhhccccchhhh---hhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHH
Q 039263 105 FGYFMIWL-AVTGRIPKPQVWQMCLYICIGANSQSFANTG---ALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHA 180 (492)
Q Consensus 105 ~Gy~~~~~-~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a---~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~ 180 (492)
++...... ....... ...+.. ..+++...+....+ .+..-.++++++||++.|...+...+|..+-..+...
T Consensus 88 ~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 163 (420)
T PRK09528 88 VLFGPFFIYVFAPLLQ-YNILLG---AIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGI 163 (420)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHH
Confidence 44322111 1111100 011111 11222222222222 2222234567788999998887777776665433222
Q ss_pred HcCCChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHH
Q 039263 181 FYGDNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASL 260 (492)
Q Consensus 181 ~f~~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~ 260 (492)
+.+.+ .+..|. ...+ ..++..
T Consensus 164 l~~~~---------------------------------~~~~f~----~~~~--~~~~~~-------------------- 184 (420)
T PRK09528 164 LFNIN---------------------------------PQINFW----LGSG--SALILL-------------------- 184 (420)
T ss_pred HHhcC---------------------------------chHhHH----HHHH--HHHHHH--------------------
Confidence 11100 011121 1000 000000
Q ss_pred HHHHHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcch
Q 039263 261 VLILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSI 340 (492)
Q Consensus 261 ~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~ 340 (492)
+.....+++ ++++.+..+++ + .+++ ...-...++.+|++
T Consensus 185 -------~~~~~~~~~---------------~~~~~~~~~~~---------~---------~~~~-~~~~~~~~~~l~~~ 223 (420)
T PRK09528 185 -------VLLFFAKPD---------------APSTAKVANAL---------G---------ANAS-AVSLKDALALLKLP 223 (420)
T ss_pred -------HHHhccccc---------------ccchhhhccch---------h---------cccc-cccHHHHHHHccCC
Confidence 000000000 00000000000 0 0000 00011346788999
Q ss_pred hHHHHHHHHHhhccceeEEecchhHHHhh----cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHH
Q 039263 341 DMLIIFIATTCGVGGTLTAIDNLGQIGSS----LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTF 416 (492)
Q Consensus 341 ~FWllf~~~~~~~g~Gl~~i~n~~~I~~s----lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i 416 (492)
.+|.+.+..++....-.++.........+ .+.+....+...++..+.+..|.+.+|.++||+++|+ .+.+
T Consensus 224 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~------~~~~ 297 (420)
T PRK09528 224 KFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN------ALLL 297 (420)
T ss_pred CeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch------hhHH
Confidence 99876654333221111111112222222 2333334456667888899999999999999997653 2334
Q ss_pred HHHHHHHHHHHHHhc-CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccc
Q 039263 417 VLLFSCVGHPFIAYG-IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 417 ~~~l~~~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
..++..++.++.... ....+++...+.|+.++......-..+.|.+..|+.++.|+.
T Consensus 298 ~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 355 (420)
T PRK09528 298 AGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLV 355 (420)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeee
Confidence 444444444443332 233455556667777777766666788999999888887765
No 46
>PRK11043 putative transporter; Provisional
Probab=99.48 E-value=7.4e-13 Score=138.04 Aligned_cols=138 Identities=19% Similarity=0.088 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHH
Q 039263 28 RWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFG 106 (492)
Q Consensus 28 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~G 106 (492)
.|..+..+++.++...+.+.+.-.-+++++++|+|++|++.+.....++.. .+++.|.+.||+|+|.++.++.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 445555555555544444555555567899999999999998666677765 4899999999999999999998888777
Q ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCC-CCceeeehhHhhhhhHH
Q 039263 107 YFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPES-RGSVLGLLKGFVGLSGA 172 (492)
Q Consensus 107 y~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~~a~~GLsa~ 172 (492)
..+.... + +++.+.....+.|.|.+...........++||++ |+.+.+......++++.
T Consensus 85 ~~~~~~~-----~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (401)
T PRK11043 85 SLGMLWV-----E--SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPA 144 (401)
T ss_pred HHHHHHh-----c--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 6544321 2 2455555555666666655555455567889875 55555544444444433
No 47
>PRK10133 L-fucose transporter; Provisional
Probab=99.48 E-value=3e-12 Score=136.12 Aligned_cols=354 Identities=12% Similarity=0.093 Sum_probs=196.0
Q ss_pred cchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
++.++-++.-..+.+..|. .-.=+.+-|++++.+|+|..|.+++.+...++..+ +++.|.+.||+|+|.++.+|.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4455544444444444444 34456678999999999999999987777777654 899999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCC-ceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRG-SVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG-~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
.+|..++... ... .+++.+...-++.|.|.+..++++-....++.|++|+ ...++..++.++|+.+=..+...+.
T Consensus 102 ~~~~~l~~~~--~~a--~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 102 ALGAALFWPA--AEI--MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHH--Hhc--CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998654311 122 2356666677788999998888877777777777655 4677777777776555433221111
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHH-HHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHH
Q 039263 183 GDNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFY-KMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLV 261 (492)
Q Consensus 183 ~~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~-~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~ 261 (492)
..+ .|....- ...+..+.+ .......+. .+ -..|..+..+.. .
T Consensus 178 ~~~----------~~~~~~~---~~~~l~~~~-~~~w~~~~~~~w------~~~f~~~~~v~~----------------~ 221 (438)
T PRK10133 178 LSN----------VPHQSQD---VLDKMTPEQ-LSAYKHSLVLSV------QTPYMIIVAIVL----------------L 221 (438)
T ss_pred hcC----------Ccccchh---hhhccChhh-HHHHHHHHHHHH------HHHHHHHHHHHH----------------H
Confidence 000 0000000 000000000 000000000 00 001111000000 0
Q ss_pred HHHHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchh
Q 039263 262 LILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSID 341 (492)
Q Consensus 262 ~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~ 341 (492)
+.++.. ... .|+. . .++ + + ++ ..++ .-.+.++.+|+++
T Consensus 222 ~~~~~~-----~~~----------------~p~~-~--~~~----~--~-~~--------~~~~---~~~~~~~ll~~~~ 259 (438)
T PRK10133 222 VALLIM-----LTK----------------FPAL-Q--SDN----H--S-DA--------KQGS---FSASLSRLARIRH 259 (438)
T ss_pred HHHHHH-----Hhc----------------CCCC-C--ccc----c--c-cc--------cccc---hhhhHHHHHhCch
Confidence 000000 000 0000 0 000 0 0 00 0000 0113467899999
Q ss_pred HHHHHHHHHhhccceeEEecchhHH-Hh-hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 342 MLIIFIATTCGVGGTLTAIDNLGQI-GS-SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 342 FWllf~~~~~~~g~Gl~~i~n~~~I-~~-slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
||...+..++..+.-....+-.... .+ ..|+++.+++...+.+.++..+||+..|.+.||+++|+ .+....+
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~------~l~~~~~ 333 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK------VLAAYAL 333 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence 9987665555443321111222222 23 46888888888899999999999999999999996543 2333333
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcc
Q 039263 420 FSCVGHPFIAYGIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYS 468 (492)
Q Consensus 420 l~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g 468 (492)
+..+.+++....+...-.....+.|++.|.++...-+...|.++ ||-+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~-~~~~ 381 (438)
T PRK10133 334 IAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTK 381 (438)
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccc-hhhc
Confidence 33333333322222223456678899999999999999999997 4443
No 48
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.48 E-value=9.1e-13 Score=137.73 Aligned_cols=140 Identities=13% Similarity=0.075 Sum_probs=97.1
Q ss_pred cccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHH
Q 039263 24 VLTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSI 101 (492)
Q Consensus 24 ~~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~v 101 (492)
...+.|+..+...+.+++... ...+...-+++++++|+|+.+++.+.....++.. ..++.|.+.||+|+|.++.++.+
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 86 (406)
T PRK15402 7 LGRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVA 86 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 345666666666666654332 3334444578999999999999987656666654 47899999999999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCC-CCceeeehhHhhhhh
Q 039263 102 MNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPES-RGSVLGLLKGFVGLS 170 (492)
Q Consensus 102 l~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~~a~~GLs 170 (492)
+..++..+.... + +.|.+.....+.|.+.+...........++||++ |+.+.++......++
T Consensus 87 ~~~~~~~~~~~~-----~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 149 (406)
T PRK15402 87 FFILTCLAILLA-----Q--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLA 149 (406)
T ss_pred HHHHHHHHHHHH-----c--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence 888776554322 2 2455655666777777776666777778899864 566666655544443
No 49
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.47 E-value=1.1e-12 Score=134.11 Aligned_cols=325 Identities=14% Similarity=0.050 Sum_probs=175.7
Q ss_pred ccccccccHHHHHhhCC--ChhhhhHHHHHhhhhc------cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 039263 45 TYMFGLYSSDIKTSLGY--DQSTLNLLSFSKDVGG------NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTG 116 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~--sq~~l~~is~~~~vg~------~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g 116 (492)
.|.++...+.+++++.+ ++++.+++.+...++. ..+++.|++.||+|+|.++.++.++..++..+.... .
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~ 86 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL--P 86 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC--C
Confidence 35667778888888765 3344444322221111 236789999999999999999999888887654432 1
Q ss_pred CCCCchh---HHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHH
Q 039263 117 RIPKPQV---WQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILL 192 (492)
Q Consensus 117 ~i~~~~~---~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllf 192 (492)
....... +.+...-++.|.+.+....++.....+++| ++||++.++......+|..+-..+.....
T Consensus 87 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~---------- 156 (394)
T TIGR00883 87 SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS---------- 156 (394)
T ss_pred ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 1110001 124445567788888888888888889997 57998888877666665554432211100
Q ss_pred HHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhh
Q 039263 193 IAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIV 272 (492)
Q Consensus 193 la~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~ 272 (492)
. ... . ...+....+..+.+. ++..++. .. .. ..
T Consensus 157 ------------~-~~~---~--~~~~~~~w~~~~~~~---~~~~~~~--------------------~~----~~--~~ 189 (394)
T TIGR00883 157 ------------Y-LLG---D--DALLEWGWRIPFLVS---AVLVLIG--------------------LY----LR--RN 189 (394)
T ss_pred ------------H-hcC---H--HHhhccchHHHHHHH---HHHHHHH--------------------HH----HH--Hh
Confidence 0 000 0 000000111000010 0000000 00 00 00
Q ss_pred hHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchh--HHHHHHHHH
Q 039263 273 IKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSID--MLIIFIATT 350 (492)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~--FWllf~~~~ 350 (492)
.+|+ ++.+.. ++ ++++ ...+.++.++++. +|......+
T Consensus 190 ~~~~----------------~~~~~~-~~--------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
T TIGR00883 190 LEET----------------PVFEKA-QE--------------------KHKK---KRGPIRETLTKHRKPFLLGLGLVI 229 (394)
T ss_pred cCCC----------------hhHHHH-Hh--------------------cccc---ccCCHHHHHHhchHHHHHHHHHHH
Confidence 0100 000000 00 0000 0123466777765 776666555
Q ss_pred hhccceeEEecchhHHH-hhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHH-H
Q 039263 351 CGVGGTLTAIDNLGQIG-SSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPF-I 428 (492)
Q Consensus 351 ~~~g~Gl~~i~n~~~I~-~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll-~ 428 (492)
+......+.......+. +.+|.++.+.+...++..+.+.++++.+|.++||++||+ ..+....+....+..+ .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----~~~~~~~~~~~~~~~~~~ 304 (394)
T TIGR00883 230 ATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP-----VLIIFTVLAALLAVPLLM 304 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-----HHHHHHHHHHHHHHHHHH
Confidence 43332222233344455 446777666777788899999999999999999997643 1221111111122111 1
Q ss_pred Hh--cCCc-hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccc
Q 039263 429 AY--GIPN-SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 429 ~~--~~~~-~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
.. .... .+.....+.|+++|..++...+.+.|.+..++-++-+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 352 (394)
T TIGR00883 305 ALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASL 352 (394)
T ss_pred HHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeee
Confidence 11 1222 334556677999999999999999999998877776665
No 50
>PRK15075 citrate-proton symporter; Provisional
Probab=99.46 E-value=1.9e-12 Score=137.01 Aligned_cols=139 Identities=12% Similarity=0.005 Sum_probs=98.2
Q ss_pred ccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHH-HHHhhhhc-c-----ccccceeeeccCCcHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGG-N-----VGVLSGLINEITPPWVVL 96 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~-~-----~~~~~G~~~D~~Gpr~~~ 96 (492)
+.+||+......+..++... ...++.+.|+++++++.++.|...+ .+...++. + ..++.|.+.||+|+|.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 89 (434)
T PRK15075 10 RESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL 89 (434)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence 45677765555555555555 5678999999999999999886543 22222222 2 257889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhH--------HHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhh
Q 039263 97 AIGSIMNFFGYFMIWLAVTGRIPKPQVW--------QMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFV 167 (492)
Q Consensus 97 ~iG~vl~~~Gy~~~~~~~~g~i~~~~~~--------~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~ 167 (492)
+++.++..++..+.. ..++ ++ .+.+.-++.|.+.+....++.....+|+| ++||++.++.....
T Consensus 90 ~~~~~~~~~~~~l~~-----~~~~--~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~ 162 (434)
T PRK15075 90 IVTLSIMASGTLLIA-----FVPG--YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQ 162 (434)
T ss_pred HHHHHHHHHHHHHHH-----hCCc--HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHH
Confidence 999998887765433 2222 22 23445567888888888888888999998 57999999876655
Q ss_pred hhh
Q 039263 168 GLS 170 (492)
Q Consensus 168 GLs 170 (492)
.++
T Consensus 163 ~~g 165 (434)
T PRK15075 163 QVA 165 (434)
T ss_pred HHH
Confidence 444
No 51
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.44 E-value=1.1e-12 Score=147.32 Aligned_cols=146 Identities=16% Similarity=0.112 Sum_probs=112.9
Q ss_pred cchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
+.+|..++...+..+..|. ....+...|++++++|++..+.+++..+..+|..+ .++.|.+.||+|+|.+++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4567666666666666665 44567778999999999999999987777777765 789999999999999999988887
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHH
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLY 178 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~ 178 (492)
.++..+...+ ++ ++.+.+.-++.|+|.+.....+.....+++|. +||.+.++...+..+|+.+-..+.
T Consensus 243 ~i~~ll~afa-----~s--~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la 311 (742)
T TIGR01299 243 GFFAFFSSFV-----QG--YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA 311 (742)
T ss_pred HHHHHHHHHH-----hh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776544322 22 45566667788888888888888889999985 699999998888888777665544
No 52
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.44 E-value=1.9e-12 Score=136.90 Aligned_cols=139 Identities=13% Similarity=-0.053 Sum_probs=91.7
Q ss_pred ccchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhC---CChhhhhHH---HHHhhhhcc-ccccceeeeccCCcHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLG---YDQSTLNLL---SFSKDVGGN-VGVLSGLINEITPPWVVL 96 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~---~sq~~l~~i---s~~~~vg~~-~~~~~G~~~D~~Gpr~~~ 96 (492)
..+||..++.+.+....-.- .+.++...+.++++++ .+..|...+ -....++.. .+++.|.+.||+|+|.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l 96 (432)
T PRK10406 17 TRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM 96 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 45677666666555555444 5668888899999984 555543332 222223332 377899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCC--CchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehh
Q 039263 97 AIGSIMNFFGYFMIWLAVTGRIP--KPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLK 164 (492)
Q Consensus 97 ~iG~vl~~~Gy~~~~~~~~g~i~--~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~ 164 (492)
.++.++..++....... .+... ..+.+++...-++.|.|.+..+.++.....+|+| ++||++.++..
T Consensus 97 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~ 166 (432)
T PRK10406 97 LISVCMMCFGSLVIACL-PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQY 166 (432)
T ss_pred HHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHH
Confidence 99999888876543321 11100 0011234556678899999999999999999997 57898766543
No 53
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.44 E-value=2.3e-12 Score=138.82 Aligned_cols=133 Identities=17% Similarity=0.113 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhh-hhHHH-----HHhhhhcc-ccccceeeeccCCcHHHHHHHHH
Q 039263 30 FMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQST-LNLLS-----FSKDVGGN-VGVLSGLINEITPPWVVLAIGSI 101 (492)
Q Consensus 30 ~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~-l~~is-----~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~v 101 (492)
..++.+.+..+.-+- .+.++...+.+++.++.+..+ .+++. .+..++.- .+++.|.+.||+|+|.++.++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 344444444444443 444555677888888655433 22221 22223333 37899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCch---hH---HHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhh
Q 039263 102 MNFFGYFMIWLAVTGRIPKPQ---VW---QMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFV 167 (492)
Q Consensus 102 l~~~Gy~~~~~~~~g~i~~~~---~~---~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~ 167 (492)
+..++-.+.. ..++.. .| ++.++-++.|.|.+..++++.....+||| ++||++.++...+.
T Consensus 96 l~~i~~~~~a-----~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~ 163 (490)
T PRK10642 96 IMSISTFCIG-----LIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGS 163 (490)
T ss_pred HHHHHHHHHH-----hcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 8888865433 223211 11 24556678899999999999999999997 57999888765443
No 54
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=3.8e-12 Score=131.25 Aligned_cols=126 Identities=15% Similarity=0.193 Sum_probs=98.1
Q ss_pred cccccccHHHHHhhCCChhhhhHHH-HHhhhhccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhH
Q 039263 46 YMFGLYSSDIKTSLGYDQSTLNLLS-FSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVW 124 (492)
Q Consensus 46 Y~fS~ys~~L~~~~~~sq~~l~~is-~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~ 124 (492)
=.|++=.|+|+|++++|.+|+..++ ......+..=+..|.+.||..||....+|-++.++--.++. .. .+++
T Consensus 46 knF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~G-----fs--~s~~ 118 (448)
T COG2271 46 KNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFG-----FS--PSLF 118 (448)
T ss_pred HhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHh-----hh--hHHH
Confidence 3689999999999999999999984 44444445568999999999999988888887766554433 22 2466
Q ss_pred HHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHH
Q 039263 125 QMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLY 178 (492)
Q Consensus 125 ~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~ 178 (492)
.+.++..+-|.=+|+.-.+|-.+..+|||+ +||+..++--...-.|+++...+.
T Consensus 119 ~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 119 LFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 666666666666677778999999999996 699999998888778888885554
No 55
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.41 E-value=9e-12 Score=134.52 Aligned_cols=143 Identities=10% Similarity=0.046 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHhhCcc-cccccccHHHHHhh-----CCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHH
Q 039263 30 FMVFASLLIMAVAGAT-YMFGLYSSDIKTSL-----GYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIM 102 (492)
Q Consensus 30 ~~l~a~~~i~l~~Gt~-Y~fS~ys~~L~~~~-----~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl 102 (492)
..+..+.+..+.-|-. -..+.-.+.+++++ +.+..+.+++.....+|..+ .++.|++.||+|+|.++.++.++
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~ 95 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELII 95 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3443334444444432 22233345565542 34555666777777777755 78999999999999999999888
Q ss_pred HHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHH
Q 039263 103 NFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAI 173 (492)
Q Consensus 103 ~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i 173 (492)
..++..+........ +...++.+...-.+.|.+.+..++.+.....++|| ++||++.++...+..+|..+
T Consensus 96 ~~v~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~ 166 (502)
T TIGR00887 96 MIIATVASGLSPGSS-PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILA 166 (502)
T ss_pred HHHHHHHHHHccCcc-cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH
Confidence 888865544321111 10114556667778889999999999999999998 56999999987776665543
No 56
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.40 E-value=1.3e-11 Score=128.47 Aligned_cols=135 Identities=10% Similarity=0.026 Sum_probs=88.0
Q ss_pred cccchHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHH
Q 039263 24 VLTGRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIM 102 (492)
Q Consensus 24 ~~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl 102 (492)
.+..||+.+...+.. +..-..+.+...-|++.+++|+|+.+.+++.....++.. ..++.|.+.||+|+|.++.++.++
T Consensus 4 ~~~~~~l~~~~~~~~-~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~ 82 (394)
T PRK11652 4 QRNVNLLFMLVLLVA-VGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSI 82 (394)
T ss_pred hhhHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHH
Confidence 334555543333332 222223444555688899999999999998666666655 478999999999999999999888
Q ss_pred HHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHh
Q 039263 103 NFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGF 166 (492)
Q Consensus 103 ~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~ 166 (492)
..++....... + +++.+.....+.|.+.+.....+.....+++| ++|+.+.++....
T Consensus 83 ~~~~~~~~~~~-----~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (394)
T PRK11652 83 FILGTLVALFA-----H--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMG 140 (394)
T ss_pred HHHHHHHHHHH-----c--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 88876554321 2 24556556666777766655555445556777 4677766654433
No 57
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.40 E-value=1.1e-11 Score=132.06 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=90.4
Q ss_pred HHHHHhh--------CCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHH---hcCC-C
Q 039263 53 SDIKTSL--------GYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAV---TGRI-P 119 (492)
Q Consensus 53 ~~L~~~~--------~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~---~g~i-~ 119 (492)
+.+++.+ +++..+.+++.....++..+ .++.|++.||+|+|.+++++.++..++........ .... +
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 115 (479)
T PRK10077 36 ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPD 115 (479)
T ss_pred HHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 5566766 88889999987777777754 88999999999999999999998888765544311 0000 1
Q ss_pred Cch-hHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHH
Q 039263 120 KPQ-VWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 120 ~~~-~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~ 174 (492)
+.+ ++.+..+-++.|.+.+..+..+.....+++|+ +||++.|+...+..+|..+-
T Consensus 116 ~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~ 172 (479)
T PRK10077 116 NTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV 172 (479)
T ss_pred chhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 111 23345566888999999999999999999985 69999999877776665543
No 58
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=1.2e-11 Score=126.79 Aligned_cols=145 Identities=14% Similarity=0.070 Sum_probs=85.9
Q ss_pred HHHhcchhHHHHHHHHHhhccceeEEecchhHH-HhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchH
Q 039263 334 LQALFSIDMLIIFIATTCGVGGTLTAIDNLGQI-GSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPL 412 (492)
Q Consensus 334 ~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I-~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~ 412 (492)
++..+++++|.++...++..+...++....... .+.+|.++.+.+...++..+.+..+++..|.++||++||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~------ 266 (375)
T TIGR00899 193 RGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR------ 266 (375)
T ss_pred hhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh------
Confidence 346778888887765554433222222223333 3457777666666667777788889999999999986543
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc----eehhhHHHHHH
Q 039263 413 LFTFVLLFSCVGHPFIAYG-IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG----AVASPVGAYIL 485 (492)
Q Consensus 413 ~l~i~~~l~~~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~----~la~~~gs~l~ 485 (492)
.+.+..+...+..+..... +...+++...+.|+++|.........+.|.+. ++.++-.++. .++..+|+.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~ 343 (375)
T TIGR00899 267 LMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVG 343 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222322222222 22234555667789999888888888899885 4555555543 34444554443
No 59
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.39 E-value=1.1e-11 Score=130.10 Aligned_cols=141 Identities=16% Similarity=0.243 Sum_probs=104.5
Q ss_pred ccchHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
...+|..+....+..+..+.. +++.+..+++++|+|..+++.+.....+.. ..+++.|.+.||+|+|.++.++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 9 NLGKYFLLIDNMLVVLGFFVV--FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred cccHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 345578887777777766444 777888899999999999999755444444 45899999999999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHH
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~ 174 (492)
.++...+... + +.|.++....+.|.+.+....+......+++| |+||++.|+......+|..+-
T Consensus 87 ~~~~~~~~~~-----~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig 151 (400)
T PRK11646 87 AAGFATMAIA-----H--EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIG 151 (400)
T ss_pred HHHHHHHHHh-----c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887654321 2 25666666667777777666666666788996 589999998776666654443
No 60
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.39 E-value=2e-12 Score=135.75 Aligned_cols=340 Identities=13% Similarity=0.034 Sum_probs=187.4
Q ss_pred HHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHH
Q 039263 31 MVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFM 109 (492)
Q Consensus 31 ~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~ 109 (492)
.+++..+.++..+ ....+-|.+.++++.+..|.+.+.....++..+ .++.|.+.||+|+|.++.++.++..+++.+
T Consensus 22 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~ 98 (417)
T PRK10489 22 VFIARFISIFGLG---LLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIG 98 (417)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHH
Confidence 3344344444433 234455777778888999999987777777654 789999999999999998888887777655
Q ss_pred HHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhH
Q 039263 110 IWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKA 188 (492)
Q Consensus 110 ~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~ 188 (492)
.... ......++|.+....++.|.+.+...++......+++|+ +|+++.++......+|..+-..+.....
T Consensus 99 ~~~~--~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~------ 170 (417)
T PRK10489 99 LALN--AFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI------ 170 (417)
T ss_pred HHHH--HHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH------
Confidence 4322 111123355555555666776666667777777899975 6898888866555554433222111110
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhh
Q 039263 189 LILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLP 268 (492)
Q Consensus 189 fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p 268 (492)
... +.+..+. ... ..+++.. +++...
T Consensus 171 --------------------~~~------~~~~~~~----~~~--~~~~~~~---------------------~~~~~l- 196 (417)
T PRK10489 171 --------------------AAG------GVAWNYG----LAA--AGTFITL---------------------LPLLRL- 196 (417)
T ss_pred --------------------HHH------hhHHHHH----HHH--HHHHHHH---------------------HHHHhC-
Confidence 000 0011111 100 0000000 000000
Q ss_pred hhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHH
Q 039263 269 IAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIA 348 (492)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~ 348 (492)
++ .+++ . + + + + ++.+.....++..++++.+|.+++.
T Consensus 197 -----~~----------------~~~~-~--~-~----~--~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (417)
T PRK10489 197 -----PA----------------LPPP-P--Q-P----R--E-------------HPLRSLLAGFRFLLASPVVGGIALL 232 (417)
T ss_pred -----CC----------------CCCC-C--c-c----c--c-------------cchHHHHHHHHHHHcChHHHHHHHH
Confidence 00 0000 0 0 0 0 0 0000001134557788888877654
Q ss_pred HHhhccceeEEecchhHHHhh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHH
Q 039263 349 TTCGVGGTLTAIDNLGQIGSS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPF 427 (492)
Q Consensus 349 ~~~~~g~Gl~~i~n~~~I~~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll 427 (492)
.++....+ .+........++ +|.++...+...+...+++.+|++.+|+++||.. +...+....+++.++.++
T Consensus 233 ~~~~~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~------~~~~l~~~~~~~~~~~~~ 305 (417)
T PRK10489 233 GGLLTMAS-AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSAR------PGLLMLLSTLGSFLAVGL 305 (417)
T ss_pred HHHHHHHH-hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccC------cchHHHHHHHHHHHHHHH
Confidence 43322111 112223344455 6777777777788889999999999999888632 222333444455555544
Q ss_pred HHhcCCc-hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc----eehhhHHHHHHh
Q 039263 428 IAYGIPN-SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG----AVASPVGAYILN 486 (492)
Q Consensus 428 ~~~~~~~-~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~----~la~~~gs~l~~ 486 (492)
+...+.. .+.+...+.|++.+.......+++.|.+..++.|+..++. .++.++|+.+..
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 306 FGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred HHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 4332222 2345555667777766677778889999877778777764 344555555443
No 61
>PRK10054 putative transporter; Provisional
Probab=99.38 E-value=4e-12 Score=133.12 Aligned_cols=127 Identities=10% Similarity=0.042 Sum_probs=83.4
Q ss_pred hhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 039263 41 VAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIP 119 (492)
Q Consensus 41 ~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~ 119 (492)
..|....++..++.+++++|+|..|++++.....+.. ...++.|++.||+|+|.++.++.++..+++.++.. . +
T Consensus 20 ~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~--~---~ 94 (395)
T PRK10054 20 TIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL--V---N 94 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH--H---h
Confidence 4455555677788999999999999999754444444 45899999999999999999999988888754432 1 2
Q ss_pred CchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHH
Q 039263 120 KPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 120 ~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~ 174 (492)
+ .|.+.....+.+.+.+....+.-....+-+| ++||++.|+......+|.++-
T Consensus 95 ~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~ig 148 (395)
T PRK10054 95 N--VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVG 148 (395)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 2 3434333333343333333333333445665 468998888776666654444
No 62
>PRK09952 shikimate transporter; Provisional
Probab=99.38 E-value=1.4e-11 Score=130.75 Aligned_cols=143 Identities=12% Similarity=0.003 Sum_probs=91.4
Q ss_pred cchHHHHHHHHHHHHhhCc-ccccccccHH-HHHhh--CCChhhhhHHHH-----Hhhhhc-cccccceeeeccCCcHHH
Q 039263 26 TGRWFMVFASLLIMAVAGA-TYMFGLYSSD-IKTSL--GYDQSTLNLLSF-----SKDVGG-NVGVLSGLINEITPPWVV 95 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~-L~~~~--~~sq~~l~~is~-----~~~vg~-~~~~~~G~~~D~~Gpr~~ 95 (492)
.+||..+..+.+....-+- ...++...+. +++++ +.++. .+++.. ...++. .-+++.|.+.||+|+|.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 3555555555555554433 4455556654 45555 67765 344422 122222 235788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCch---h---HHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhh
Q 039263 96 LAIGSIMNFFGYFMIWLAVTGRIPKPQ---V---WQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVG 168 (492)
Q Consensus 96 ~~iG~vl~~~Gy~~~~~~~~g~i~~~~---~---~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~G 168 (492)
+.++.++..++..+.. ..++.. + +.+...-.+.|.|.+..+.++.....+|+|+ +||++.+....+.+
T Consensus 97 l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~ 171 (438)
T PRK09952 97 LMLTVWMMGIATALIG-----LLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYG 171 (438)
T ss_pred HHHHHHHHHHHHHHHh-----cCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence 9999888877754332 233211 1 1244455688999999999988899999985 78988888776666
Q ss_pred hhHHHH
Q 039263 169 LSGAIL 174 (492)
Q Consensus 169 Lsa~i~ 174 (492)
+|..+-
T Consensus 172 ~G~~l~ 177 (438)
T PRK09952 172 VGLLLS 177 (438)
T ss_pred HHHHHH
Confidence 665443
No 63
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.36 E-value=3.1e-11 Score=125.46 Aligned_cols=119 Identities=13% Similarity=0.065 Sum_probs=77.1
Q ss_pred ccccccHHHHHhhCCChhhh-----hHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 039263 47 MFGLYSSDIKTSLGYDQSTL-----NLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPK 120 (492)
Q Consensus 47 ~fS~ys~~L~~~~~~sq~~l-----~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~ 120 (492)
.+..+-|++.+++|++..|. +.+.....++. ...++.|.+.||+|+|.++.++.++..++..++... +
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~- 105 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA-----Q- 105 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH-----h-
Confidence 35556777778899986653 44433333333 347889999999999999999988888877654421 2
Q ss_pred chhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHH
Q 039263 121 PQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAI 173 (492)
Q Consensus 121 ~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i 173 (492)
++|.+.....+.|.+.++ +........+++| ++||.+.|+......++..+
T Consensus 106 -~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (408)
T PRK09874 106 -NIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALL 157 (408)
T ss_pred -hHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHH
Confidence 245555444455555443 3444445567776 57899988876655555433
No 64
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.36 E-value=7.7e-12 Score=128.17 Aligned_cols=320 Identities=9% Similarity=-0.004 Sum_probs=174.6
Q ss_pred ccHHHHHhhCCChhhhhHHHHHhhhhccccccceeeeccC-----CcHHHH-HHHHHHHHHHHHHHHHHHhcCCCCchhH
Q 039263 51 YSSDIKTSLGYDQSTLNLLSFSKDVGGNVGVLSGLINEIT-----PPWVVL-AIGSIMNFFGYFMIWLAVTGRIPKPQVW 124 (492)
Q Consensus 51 ys~~L~~~~~~sq~~l~~is~~~~vg~~~~~~~G~~~D~~-----Gpr~~~-~iG~vl~~~Gy~~~~~~~~g~i~~~~~~ 124 (492)
--|.+.++.|+|.+|++.+++...... ..++.|.+.||+ |+|... +++.++..+....+ .+.. +..++|
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l--~~~~--~~~~l~ 84 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL--SFLV--PSTDLP 84 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH--HcCC--cchhHH
Confidence 346778889999999999865544443 388999999998 777764 45555554443222 2221 112345
Q ss_pred HHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHh
Q 039263 125 QMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFV 203 (492)
Q Consensus 125 ~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~ 203 (492)
.+.....+.+...+..+.+.-....+++| ++||.+.|+...++.+|..+-..+...+.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~--------------------- 143 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLA--------------------- 143 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 55555555566666777777777889996 57999999988777776555533322111
Q ss_pred hhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCC
Q 039263 204 FLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSK 283 (492)
Q Consensus 204 ~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~ 283 (492)
.....+ + ......+..+.+ .++..++. .+......+
T Consensus 144 -----~~~g~~-~-~~~~~wr~~f~i---~ai~~l~~--------------------------~~~~~~~~~-------- 179 (356)
T TIGR00901 144 -----SPEFAN-T-GLITLWGYIFFW---TALLILPG--------------------------LLVTLFLAK-------- 179 (356)
T ss_pred -----hhcccc-c-ccccccHHHHHH---HHHHHHHH--------------------------HHHHHHhcc--------
Confidence 100000 0 000111111111 00100000 000000000
Q ss_pred CCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchh---HHHHHHHHHhhccceeEEe
Q 039263 284 KPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSID---MLIIFIATTCGVGGTLTAI 360 (492)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~---FWllf~~~~~~~g~Gl~~i 360 (492)
|+++. + + ++ + ++ + ++ ...++++.++++. +|.+.+..++.......+.
T Consensus 180 --------e~~~~---~-~----~~-~-~~---------~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (356)
T TIGR00901 180 --------EPQED---A-S----VP-K-PL---------T-QA--VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAAT 229 (356)
T ss_pred --------CCCcc---c-c----cc-h-hH---------H-HH--HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 0 00 0 00 0 00 0114456677765 6666554444322211222
Q ss_pred cchhHHHhhcCCCCCccchhhhHHH-hhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHh---c-----
Q 039263 361 DNLGQIGSSLGYPARSTTTFVSLVS-IWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAY---G----- 431 (492)
Q Consensus 361 ~n~~~I~~slg~~~~~~~~~Vsl~S-i~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~---~----- 431 (492)
.......+.+|+++.+.+...++.+ +...+|.+++|+++||+++|+ .+.+..++..++..++.. .
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY------ALLLFGIVQALTNAGFVWLASNGHHDG 303 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH------HHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3344455567877666666666555 578899999999999997654 233333434443332211 1
Q ss_pred ---CC-chhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccccee
Q 039263 432 ---IP-NSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAV 476 (492)
Q Consensus 432 ---~~-~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~l 476 (492)
.. ..+..+.++.++++|..+....++..|.+-+++-|+.+|+...
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 352 (356)
T TIGR00901 304 ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSS 352 (356)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence 11 1234455566999999999999999999999999998887654
No 65
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.35 E-value=1.2e-11 Score=127.44 Aligned_cols=122 Identities=11% Similarity=0.067 Sum_probs=92.9
Q ss_pred cccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhH
Q 039263 46 YMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVW 124 (492)
Q Consensus 46 Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~ 124 (492)
..|.-.-|++.+++|+|..|.+.+..+..++... .++.|.+.||+|+|.++.+|.++..++..++... ++ .+
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-----~~--~~ 80 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-----QT--ID 80 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-----cc--HH
Confidence 4556677888999999999999986666666654 8999999999999999999999888887655432 22 45
Q ss_pred HHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHH
Q 039263 125 QMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 125 ~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~ 174 (492)
.+.....+.|.+.+..+........+++|+ +||++.|+...+.+++..+-
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 131 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLA 131 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556667777777777777778889985 68999998877666655443
No 66
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=4.6e-11 Score=126.29 Aligned_cols=138 Identities=12% Similarity=0.035 Sum_probs=92.5
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCC--------CccchhhhHHHhhhhhhhcccchhhHHHh
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPA--------RSTTTFVSLVSIWNYLGRVVAGFASEILL 403 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~--------~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~ 403 (492)
+.++.+|+++||.+++..++....-..+........++.|+++ ...+...++..+....+++..|.++||++
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g 279 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG 279 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3467899999998887766642211111111122233445432 33467788889999999999999999995
Q ss_pred hhcCCCchHHHHHHHHHHHHHHHHHHhcC--C---chhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccce
Q 039263 404 KKYKIPRPLLFTFVLLFSCVGHPFIAYGI--P---NSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGA 475 (492)
Q Consensus 404 ~~~~~~R~~~l~i~~~l~~~~~ll~~~~~--~---~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~ 475 (492)
+| ..+.+..++..+...++.... . ..+++..++.|+++|......+.+++|.++.++.|+.+|+..
T Consensus 280 ~r------~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~ 350 (418)
T TIGR00889 280 IK------KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFT 350 (418)
T ss_pred cH------HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 44 345555556666544433321 1 134566778899999888899999999999998998887763
No 67
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.28 E-value=7.9e-11 Score=138.82 Aligned_cols=329 Identities=12% Similarity=-0.021 Sum_probs=182.2
Q ss_pred ccccHHHHHhhCCChhh--hhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Q 039263 49 GLYSSDIKTSLGYDQST--LNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQ 125 (492)
Q Consensus 49 S~ys~~L~~~~~~sq~~--l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~ 125 (492)
.+..+.+.+.++.+++. .+++.++..++. .+++++|.+.||+|+|.+++++.++..++..+..++.. .. ++|.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~--~~--~~~~ 105 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY--LG--WFWL 105 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH--Hc--cHHH
Confidence 44555666667776554 355544444544 35889999999999999988887765555444332221 12 2566
Q ss_pred HHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHhh
Q 039263 126 MCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVF 204 (492)
Q Consensus 126 l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~~ 204 (492)
+.+..++.|.+.+...++......+++| ++||.+.|+......+|..+-..+...+..
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~--------------------- 164 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE--------------------- 164 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 6666677788888888888888999998 479999999877766544333222111110
Q ss_pred hhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCCC
Q 039263 205 LRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSKK 284 (492)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~ 284 (492)
.+.. .. .++....+..+... .+...+.. +++.... ++
T Consensus 165 -~~~~-~~---~~~~~~~~~~~~~~----~~~~~~~~-------------------~~~~~~~------~~--------- 201 (1146)
T PRK08633 165 -SVNG-NT---PSEILGRIAPAGLV----LLAVAVLG-------------------LIFAYRL------PK--------- 201 (1146)
T ss_pred -hhcc-cc---ccccccchHHHHHH----HHHHHHHH-------------------HHHHhcC------cC---------
Confidence 0000 00 00000011100000 00000000 0000000 10
Q ss_pred CccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecchh
Q 039263 285 PSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDNLG 364 (492)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~ 364 (492)
.++.... .++ .+ ...........+++.++++.+|.+.+..++.......+.....
T Consensus 202 -------~~~~~~~-~~~--------~~---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (1146)
T PRK08633 202 -------VPAAAPE-VFD--------KK---------KYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFP 256 (1146)
T ss_pred -------CCCCCcc-ccc--------cc---------ccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 0000000 000 00 0000000012456778899999877766554444333444444
Q ss_pred HHHh-hcCCCCC-ccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHH
Q 039263 365 QIGS-SLGYPAR-STTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASV 441 (492)
Q Consensus 365 ~I~~-slg~~~~-~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~ 441 (492)
.+.+ .+|.+.. ..+...++..++..+|.+++|.++||..+++ .+.+..++++++.+++.... ...+.+..+
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG------LVPLGALGLALSLFLLPTAPSLASVLVLFF 330 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc------chhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4443 4677766 6677778888889999999999998875432 23333344444443333222 224456677
Q ss_pred HHHhhhcchhhhHHHHHHHhhcCCCccccccccee
Q 039263 442 IIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAV 476 (492)
Q Consensus 442 liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~l 476 (492)
+.|++.|.......+++.+.+..++-|+-+++..+
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~ 365 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNF 365 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHH
Confidence 88999999999999999999988888887776543
No 68
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.27 E-value=5e-11 Score=127.53 Aligned_cols=301 Identities=15% Similarity=0.099 Sum_probs=184.8
Q ss_pred HHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhh
Q 039263 56 KTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGA 134 (492)
Q Consensus 56 ~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g 134 (492)
+.+++||++|-+++-.+...|... .+|+|.++||+|.|.++..++++..++-.++=++.+- ..|.+++.=++.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~-----~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI-----GFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh-----cchhhHHHHHHhH
Confidence 568999999999998888899887 6788999999999999999999999888776433321 1233455567888
Q ss_pred ccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHhhhhccccccc
Q 039263 135 NSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVFLRTFRIIKI 213 (492)
Q Consensus 135 ~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~~~~~i~~~~~ 213 (492)
.+.+..+++.-.-..||.| ++|++..+++.++.-+|..+-.++....-+. .
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s----------------------~------ 191 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES----------------------S------ 191 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc----------------------C------
Confidence 8999998988888999998 6899999999988877766664433332211 0
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCCCCccccCCCC
Q 039263 214 VRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSKKPSLEDANSH 293 (492)
Q Consensus 214 ~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (492)
.+-+..|+....+++ +..++. ..+ ..+++. ++
T Consensus 192 ---~GW~sifY~~g~~g~---i~~~~w--------------------------~~~---~~d~P~-------------~h 223 (466)
T KOG2532|consen 192 ---LGWPSIFYVFGIVGL---IWFILW--------------------------FLF---YSDSPS-------------KH 223 (466)
T ss_pred ---CCCchHHHHHHHHHH---HHHHHH--------------------------HHH---hcCCcc-------------cC
Confidence 122344442211110 100010 000 000000 00
Q ss_pred CccccccCCCCCCCCCCccccccccccc-cCCCCCCCcccHHHHhcchhHHHHHHHHHhhcc-ceeEEecchhHHHhhcC
Q 039263 294 PELKIVTELPPQQASPSTEAQVCCTENI-FMPPDRGEDYTILQALFSIDMLIIFIATTCGVG-GTLTAIDNLGQIGSSLG 371 (492)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g-~Gl~~i~n~~~I~~slg 371 (492)
+... ++|.+..+++. ++..+++++..++++++++.+|.+|+..++..- .-++.++--..+-+-++
T Consensus 224 ~~is-------------~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~ 290 (466)
T KOG2532|consen 224 PNIS-------------EKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLG 290 (466)
T ss_pred CCCC-------------HHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC
Confidence 0000 00000000000 001111146789999999999999998777433 32222333333334488
Q ss_pred CCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCC----chHHHHHHHHHHHHHHHHHHhcC--Cc-----hhHHHH
Q 039263 372 YPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIP----RPLLFTFVLLFSCVGHPFIAYGI--PN-----SLYAAS 440 (492)
Q Consensus 372 ~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~----R~~~l~i~~~l~~~~~ll~~~~~--~~-----~l~~~~ 440 (492)
++-++.+.+.++=-+.+..-+++.|.++||+.+| .+. |..+-.+++....+.++.+.+.. .. .+-++.
T Consensus 291 f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~ 369 (466)
T KOG2532|consen 291 FDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAI 369 (466)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHH
Confidence 8889999999999999999999999999999886 443 34444555665555554443322 11 122333
Q ss_pred HHHHhhhcchh
Q 039263 441 VIIGFCFGAQW 451 (492)
Q Consensus 441 ~liG~~~G~~~ 451 (492)
.+.|++.+|..
T Consensus 370 ~~~g~~~~Gf~ 380 (466)
T KOG2532|consen 370 GLSGFNISGFY 380 (466)
T ss_pred HHcccchhhhH
Confidence 44466666654
No 69
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.24 E-value=3e-10 Score=118.43 Aligned_cols=135 Identities=11% Similarity=0.044 Sum_probs=79.3
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecc-hhHHHhhc----CCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhc
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDN-LGQIGSSL----GYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKY 406 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n-~~~I~~sl----g~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~ 406 (492)
+.+|.+|++++|.+.+..++.. .......+ .....+.. +.+....+...++..+.+..+++..|.+.||+++|+
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~ 285 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVA-CVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN 285 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 5689999999987655443322 11111111 12222221 222233455667778889999999999999996542
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccc
Q 039263 407 KIPRPLLFTFVLLFSCVGHPFIAYG-IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 407 ~~~R~~~l~i~~~l~~~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
.+.+..++..+...+.... ....+++...+.|++++......-..+.|.++.|+-++.++.
T Consensus 286 ------~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~ 347 (396)
T TIGR00882 286 ------ALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLI 347 (396)
T ss_pred ------hHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehH
Confidence 3444455555544443332 233455666667888776666666677888887776664443
No 70
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.18 E-value=2.7e-10 Score=134.68 Aligned_cols=139 Identities=14% Similarity=0.030 Sum_probs=94.3
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCc
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPR 410 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R 410 (492)
.+++..+++.+|.+.+.+++....+.++......+.+. +|.++...+...+.++++..+|.+..|.++|+..+++...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~- 295 (1140)
T PRK06814 217 LLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVP- 295 (1140)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeeh-
Confidence 46778899999998887666554443344445555554 6877777888889999999999999999988654432111
Q ss_pred hHHHHHHHHHHHHHHHHHHh---------------------cCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccc
Q 039263 411 PLLFTFVLLFSCVGHPFIAY---------------------GIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYST 469 (492)
Q Consensus 411 ~~~l~i~~~l~~~~~ll~~~---------------------~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~ 469 (492)
+..+++.+..+.+.. .....+.+..+++|++.|......++++.+....++.|+
T Consensus 296 -----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~ 370 (1140)
T PRK06814 296 -----IGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRAR 370 (1140)
T ss_pred -----HHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccccee
Confidence 111111111111111 112234566778899999999999999999999999999
Q ss_pred cccccee
Q 039263 470 LYNFGAV 476 (492)
Q Consensus 470 nyg~~~l 476 (492)
.+|+..+
T Consensus 371 v~g~~~~ 377 (1140)
T PRK06814 371 VIAANNV 377 (1140)
T ss_pred eeHHHHH
Confidence 8887543
No 71
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.17 E-value=1.1e-09 Score=113.79 Aligned_cols=134 Identities=9% Similarity=-0.083 Sum_probs=90.7
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCch
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRP 411 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~ 411 (492)
+.++.+|+++||.+.+..++..+.-..+.....+..++.|.++...+...++..+....+++.+|.+.||+++ .
T Consensus 197 ~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~------~ 270 (382)
T TIGR00902 197 AFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSA------R 270 (382)
T ss_pred hHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCH------H
Confidence 4678999999999888766655544445556666667788877777766666666666666666666665533 2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccc
Q 039263 412 LLFTFVLLFSCVGHPFIAYGIP-NSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYN 472 (492)
Q Consensus 412 ~~l~i~~~l~~~~~ll~~~~~~-~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg 472 (492)
..+.+..+...+...+....+. ..+++...+-|+++|..+......+.+. -.++.++-.+
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~ 331 (382)
T TIGR00902 271 DLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQA 331 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHH
Confidence 3455666666666555443333 3456677788999999999999999987 5556554333
No 72
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.12 E-value=2.1e-09 Score=111.73 Aligned_cols=136 Identities=10% Similarity=-0.075 Sum_probs=81.2
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCch
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRP 411 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~ 411 (492)
++++.+|++.||.+.+..++....-..+.+......++.|+++.+.+...++..+.+..+++..|.+.||.+ +.
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~------~~ 270 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWS------AR 270 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCC------HH
Confidence 568999999999876654443322112233344455667877666666666666666667776666666653 33
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 412 LLFTFVLLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 412 ~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
..+.+..+.+.+..++....+ ...+++..++.|+++|......-..+.+.- ..|.++.++..
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 333 (382)
T PRK11128 271 DLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALY 333 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHH
Confidence 345555566666554443333 234566677778888887666656555553 34445545543
No 73
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.11 E-value=4.6e-09 Score=109.66 Aligned_cols=99 Identities=10% Similarity=0.118 Sum_probs=62.7
Q ss_pred hhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHh-cCCchhHHHHHHHHhh
Q 039263 368 SSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAY-GIPNSLYAASVIIGFC 446 (492)
Q Consensus 368 ~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~-~~~~~l~~~~~liG~~ 446 (492)
+.+++++.+.+...++..+....|++++|.++||+++|+ .+........+....... .....+.+...+.+++
T Consensus 245 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 318 (393)
T PRK15011 245 NELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF------LMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIY 318 (393)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 457787777777777777888889999999999997653 122222222222212211 2222334445566778
Q ss_pred hcchhhhHHHHHHHhhcCCCccccccc
Q 039263 447 FGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 447 ~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
+|...+..+....|.+. ++-|+..++
T Consensus 319 ~g~~~~~~~~~~~~~~p-~~~g~~~~~ 344 (393)
T PRK15011 319 IGILGGIGMLYFQDLMP-GQAGSATTL 344 (393)
T ss_pred HHHHHHHHHHHHHHhCC-CCcchHHHH
Confidence 88888888888999996 556765544
No 74
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.09 E-value=1.6e-09 Score=113.93 Aligned_cols=135 Identities=13% Similarity=0.135 Sum_probs=83.2
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHH-hh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCC
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIG-SS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIP 409 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~-~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~ 409 (492)
.+++.+++++||.+.+..++.... ....+...... +. ++ ++...+...++..+...++.+++|.++||+++|+
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~--- 288 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLA-FNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI--- 288 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHH-HHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH---
Confidence 456788999999887655543222 11111111111 11 22 2233344556678889999999999999996542
Q ss_pred chHHHHHHHHHHHHHHHHHHhcC--CchhHHHHHHHHhhhcchhhhHHHHHHHh-------hcCCCcccccccc
Q 039263 410 RPLLFTFVLLFSCVGHPFIAYGI--PNSLYAASVIIGFCFGAQWPLLFAIISEI-------FGLKYYSTLYNFG 474 (492)
Q Consensus 410 R~~~l~i~~~l~~~~~ll~~~~~--~~~l~~~~~liG~~~G~~~~~~P~i~se~-------FG~k~~g~nyg~~ 474 (492)
.+.+..++..++.+.+.... ...+.+..++.|+++|.......++.+|. .|.++-|.-+++.
T Consensus 289 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 359 (437)
T TIGR00792 289 ---LFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR 359 (437)
T ss_pred ---HHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH
Confidence 33444445555554433322 12345566777999999999999999887 4667777777664
No 75
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1.3e-08 Score=104.96 Aligned_cols=328 Identities=15% Similarity=0.147 Sum_probs=204.0
Q ss_pred ccccHHHHHhhCCChhhhhHHHHHhhhhcc--ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHH
Q 039263 49 GLYSSDIKTSLGYDQSTLNLLSFSKDVGGN--VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQM 126 (492)
Q Consensus 49 S~ys~~L~~~~~~sq~~l~~is~~~~vg~~--~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l 126 (492)
.+--|++|+.+++|+.|.+++..+.. ++| .++|+|++.+|+|.|..+++|..++.+|..++|-+-..+ .+-..
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff-~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~----~y~~F 107 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFF-GGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK----SYGFF 107 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHH-HHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh----hHHHH
Confidence 45679999999999999999866544 444 389999999999999999999999999999888442222 12223
Q ss_pred HHHHHHhhccccchhhhhhhhhhhhcCCC-CCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHhhh
Q 039263 127 CLYICIGANSQSFANTGALVTCVKNFPES-RGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVFL 205 (492)
Q Consensus 127 ~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~~~ 205 (492)
+.-.++-+.|.+.-.|++-.-.....|++ .-.=..+..+|+|||+.+--.+.+.+...+..
T Consensus 108 L~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~------------------ 169 (422)
T COG0738 108 LVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVA------------------ 169 (422)
T ss_pred HHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh------------------
Confidence 33345678899999999999999999874 33334577899999999886666554432100
Q ss_pred hcccccccccc--chhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCC
Q 039263 206 RTFRIIKIVRQ--ANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSK 283 (492)
Q Consensus 206 ~~i~~~~~~~~--~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~ 283 (492)
... -++..+ ......+..+-++.++ .++++. .. .....
T Consensus 170 ~~~--~~~~~~~~~~~~~~~v~~pYl~~~--~~lvll-------------------------~v----~~~~~------- 209 (422)
T COG0738 170 LTM--SAAQILAIKGADASSVQFPYLILA--GLLVLL-------------------------AV----LILLS------- 209 (422)
T ss_pred hcc--CHHHHHHHHHHHHHhhhhHHHHHH--HHHHHH-------------------------HH----HHHhc-------
Confidence 000 000000 0000000111111110 000000 00 00000
Q ss_pred CCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecch
Q 039263 284 KPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDNL 363 (492)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~ 363 (492)
+.|+.++ . + + +..++.|.+..++.+++++|.--+..|+=+|...++=+-+
T Consensus 210 --------k~p~~~~-~-------~---~-----------~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl 259 (422)
T COG0738 210 --------KLPDLQV-A-------A---P-----------SLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL 259 (422)
T ss_pred --------cCCcCCc-c-------c---c-----------cccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 0010000 0 0 0 0001112367899999999999999999899887777777
Q ss_pred hHHHhh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHH-HHHHHHHHHHHHHhcCCchhHHHHH
Q 039263 364 GQIGSS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTF-VLLFSCVGHPFIAYGIPNSLYAASV 441 (492)
Q Consensus 364 ~~I~~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i-~~~l~~~~~ll~~~~~~~~l~~~~~ 441 (492)
-++.++ .|.++.+++..++.+=.+-..||++.-.+-.|+ +..|...+.. ..++.++. ........-..+..
T Consensus 260 ~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~----~~~k~Laf~a~~~ill~~~---~~l~~g~v~~~~l~ 332 (422)
T COG0738 260 VSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI----KPEKYLAFYALIAILLLLA---VALIGGVVALYALF 332 (422)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHH---HHHhcChHHHHHHH
Confidence 777777 677878888899999999999995544443444 3334333321 12222221 22233344456777
Q ss_pred HHHhhhcchhhhHHHHHHHhhcCCCcccccccceeh
Q 039263 442 IIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVA 477 (492)
Q Consensus 442 liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la 477 (492)
++|+..+.+|.+.=++..+..| +|-+.-=+++.++
T Consensus 333 ~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~ma 367 (422)
T COG0738 333 LIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVMA 367 (422)
T ss_pred HHHHHhHHHHHHHHHHHHhccC-ccccccceeeeeh
Confidence 8899999999999999999999 7777665665554
No 76
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.07 E-value=3.1e-09 Score=114.83 Aligned_cols=118 Identities=11% Similarity=-0.054 Sum_probs=77.0
Q ss_pred cHHHHHhhCCChhhhhHHHHHhhhhccccccceeeeccC-----CcHHH-HHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Q 039263 52 SSDIKTSLGYDQSTLNLLSFSKDVGGNVGVLSGLINEIT-----PPWVV-LAIGSIMNFFGYFMIWLAVTGRIPKPQVWQ 125 (492)
Q Consensus 52 s~~L~~~~~~sq~~l~~is~~~~vg~~~~~~~G~~~D~~-----Gpr~~-~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~ 125 (492)
-|...++.|.|.+|++.++.....- .+.++.|.+.||+ |+|.. +.++.+...++..++. +... ..++|.
T Consensus 35 l~~~l~~~g~~~~~ig~~~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a--~~~~--~~~l~~ 109 (491)
T PRK11010 35 LQAWMTVENIDLKTIGFFSLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMG--FLEP--GTQLRW 109 (491)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHH--HcCC--cchHHH
Confidence 3444455688888888863322221 3578999999999 88875 4556655555544332 2221 123555
Q ss_pred HHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHH
Q 039263 126 MCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 126 l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~ 174 (492)
+....++.+.+.+..+.+.-....+||| ++||++.|+....+.+|..+-
T Consensus 110 l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg 159 (491)
T PRK11010 110 LAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVS 159 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHH
Confidence 5555556676677777887788889998 789999999887776654444
No 77
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.05 E-value=3.6e-09 Score=110.78 Aligned_cols=129 Identities=14% Similarity=0.173 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHH
Q 039263 28 RWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFG 106 (492)
Q Consensus 28 Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~G 106 (492)
.+..+..+.++.......+.+. .+++.+++|.++.+++++..+..+.. .+++++|.+.||+|+|.+++++.++..++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFA--AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHH
Confidence 3444555555544444444333 34667888889888888755555554 45899999999999999999998888777
Q ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhh
Q 039263 107 YFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVG 168 (492)
Q Consensus 107 y~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~G 168 (492)
....... .+ . ...-++.|.+.++.+.+......+++| ++|+++.|+......
T Consensus 82 ~~~~~~~-----~~--~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~ 134 (393)
T PRK11195 82 CLLMLFG-----IH--P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTI 134 (393)
T ss_pred HHHHHHH-----HH--H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 5443221 11 1 122346788889999999999999998 579999998765543
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.05 E-value=2.4e-09 Score=112.00 Aligned_cols=116 Identities=9% Similarity=-0.044 Sum_probs=79.0
Q ss_pred HHHHHhhCCChhhhhHHHHHhhhhccccccceeeeccC-----CcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCchhHHH
Q 039263 53 SDIKTSLGYDQSTLNLLSFSKDVGGNVGVLSGLINEIT-----PPWV-VLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQM 126 (492)
Q Consensus 53 ~~L~~~~~~sq~~l~~is~~~~vg~~~~~~~G~~~D~~-----Gpr~-~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l 126 (492)
.-|++ .|+|.+|++++...... -.+.++.|.+.||+ |+|. .+.++.+...+....+. +... ..++|.+
T Consensus 24 ~~l~~-~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~--~~~~--~~~~~~l 97 (402)
T PRK11902 24 AWMTV-EGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMA--FCPP--HAALWPL 97 (402)
T ss_pred HHHHH-cCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHH--hcCc--cchHHHH
Confidence 33554 59999999998555444 35689999999999 6654 56666666655654433 2221 1235666
Q ss_pred HHHHHHhhccccchhhhhhhhhhhhcCCC-CCceeeehhHhhhhhHHHH
Q 039263 127 CLYICIGANSQSFANTGALVTCVKNFPES-RGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 127 ~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~~a~~GLsa~i~ 174 (492)
..+.++.+......+.+.-....+++|+| ||++.++...+++++..+-
T Consensus 98 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g 146 (402)
T PRK11902 98 AGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVS 146 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHH
Confidence 55555556666677777777788999865 9999999887776664444
No 79
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.99 E-value=8.1e-09 Score=107.59 Aligned_cols=141 Identities=18% Similarity=0.181 Sum_probs=102.8
Q ss_pred cccccchHHHHHHHHHHHHhhCcc-cccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHH
Q 039263 22 VGVLTGRWFMVFASLLIMAVAGAT-YMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIG 99 (492)
Q Consensus 22 ~~~~~~Rw~~l~a~~~i~l~~Gt~-Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG 99 (492)
.++..+||+.|++..+.+++.|-. =.|+..++...+-|+ +.....+. .+...+.--+++++=++.||+|-|.+.++|
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 378899999999999999999885 678888888999999 44444444 344445555789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCchhHH-HH-HHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehh
Q 039263 100 SIMNFFGYFMIWLAVTGRIPKPQVWQ-MC-LYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLK 164 (492)
Q Consensus 100 ~vl~~~Gy~~~~~~~~g~i~~~~~~~-l~-~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~ 164 (492)
+++.++|..+=..+..-.+++ ..|. ++ .=..+++...-++..-+-+-+.-||| |+|-.|..+-+
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~-~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v 182 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPP-LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGV 182 (480)
T ss_pred HHHHHHHHHHhhhccCccccc-cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHH
Confidence 999999975434333333332 2342 22 22456777777777766688999996 67887776543
No 80
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.94 E-value=1.4e-08 Score=106.98 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=83.8
Q ss_pred ccccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
...+.---|++.+++|.++.+.++. +..........++.|.+.||+|+|.++++|.++..++..+... .+ +.
T Consensus 32 ~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~--~~ 104 (413)
T PRK15403 32 TDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF-----TT--SM 104 (413)
T ss_pred HHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH-----cC--CH
Confidence 3444444457888999999998885 4443333345889999999999999999898877777543332 12 24
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAI 173 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i 173 (492)
+.+...-++.|.+.++..........++||+ +|+++.++......++..+
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPII 155 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5565556666777666555556666788986 5788888776666665443
No 81
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.93 E-value=1.1e-09 Score=121.71 Aligned_cols=126 Identities=13% Similarity=0.107 Sum_probs=97.0
Q ss_pred ccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHH--hcCC-----
Q 039263 47 MFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAV--TGRI----- 118 (492)
Q Consensus 47 ~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~--~g~i----- 118 (492)
..+.--++++++++++.+|.+++..+.+++..+ .++.|++.||+|+|..+.+|.++.++|-+++.+.- .+..
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 445556899999999999999998888888865 79999999999999999999999999987765431 0000
Q ss_pred -----------------------------------C--CchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCcee
Q 039263 119 -----------------------------------P--KPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVL 160 (492)
Q Consensus 119 -----------------------------------~--~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~ 160 (492)
. +..++.+.+.-++.|.|.+..++.......+|+|. +|++..
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 0 11223344567889999999999999999999985 689999
Q ss_pred eehhHhhhhhHH
Q 039263 161 GLLKGFVGLSGA 172 (492)
Q Consensus 161 Gi~~a~~GLsa~ 172 (492)
|+..+...+|..
T Consensus 211 ~i~~~~~~iG~~ 222 (633)
T TIGR00805 211 GILESIAVFGPA 222 (633)
T ss_pred HHHHHHHHhhhH
Confidence 987766665543
No 82
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.87 E-value=2.3e-08 Score=105.67 Aligned_cols=318 Identities=15% Similarity=0.160 Sum_probs=175.8
Q ss_pred cHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeec----cCCcHHH-HHHHHHHHHHHHHHHHHH-HhcCCC-Cchh
Q 039263 52 SSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINE----ITPPWVV-LAIGSIMNFFGYFMIWLA-VTGRIP-KPQV 123 (492)
Q Consensus 52 s~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D----~~Gpr~~-~~iG~vl~~~Gy~~~~~~-~~g~i~-~~~~ 123 (492)
.+-+.+.+|++...++++ .+.-......-++.|.+.| |+|+|.. +++|+++..+++.+++.. -.+.-. ..-.
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 444567789999998887 5555555567899999999 7886654 468999999998887754 111111 1113
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcC--CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFP--ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAIS 201 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP--~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~ 201 (492)
|....+.+. ..+-.+.+..-.......-| |+|...++.-..+..+|+.+.+.+...
T Consensus 105 ~~~~~~~l~-~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~--------------------- 162 (428)
T PF13347_consen 105 WLFVFYILF-DIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPI--------------------- 162 (428)
T ss_pred HHHHHHHHH-HHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhh---------------------
Confidence 433333333 55555554433333334444 578888888666555555443332211
Q ss_pred HhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhcc
Q 039263 202 FVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRK 281 (492)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~ 281 (492)
++..... ++..+.++....+ .++..++...+. ....||+
T Consensus 163 -----l~~~~g~---~~~~~~~~~~~~v---~~iv~~v~~~i~-------------------------~~~~ke~----- 201 (428)
T PF13347_consen 163 -----LVSWFGG---GDTSNGYRWMALV---LAIVGLVFFLIT-------------------------FFFVKER----- 201 (428)
T ss_pred -----hhhhhcc---CccchHHHHHHHH---HHHHHHHHhhhh-------------------------hheeeec-----
Confidence 1111110 1111233311111 111111110000 0000110
Q ss_pred CCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEec
Q 039263 282 SKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAID 361 (492)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~ 361 (492)
++++ + + ++++.+.-..+++..++++|+.++...++....-.+...
T Consensus 202 ----------~~~~----~---------~------------~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~ 246 (428)
T PF13347_consen 202 ----------SVEV----T---------E------------QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNT 246 (428)
T ss_pred ----------cccc----c---------c------------cccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhh
Confidence 0000 0 0 000000112457889999999988888775333322232
Q ss_pred chhHHHhh-cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHH-h--cCCchhH
Q 039263 362 NLGQIGSS-LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIA-Y--GIPNSLY 437 (492)
Q Consensus 362 n~~~I~~s-lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~-~--~~~~~l~ 437 (492)
..-...+. ++.+ ...+....+..+...++-++++.++||++||+ .+.+..++.+++.+.+. . .....++
T Consensus 247 ~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (428)
T PF13347_consen 247 FLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKK------VYIIGLLLAALGFLLLFFLGPGSPWLVL 319 (428)
T ss_pred HHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHcccee------ehhhhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 33334443 3433 44556667888999999999999999997754 33344444444444322 2 2455678
Q ss_pred HHHHHHHhhhcchhhhHHHHHHHhh-------cCCCcccccccc
Q 039263 438 AASVIIGFCFGAQWPLLFAIISEIF-------GLKYYSTLYNFG 474 (492)
Q Consensus 438 ~~~~liG~~~G~~~~~~P~i~se~F-------G~k~~g~nyg~~ 474 (492)
+..++.|+++|..+.+.+++.+|.- |.|+-|..++..
T Consensus 320 i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~ 363 (428)
T PF13347_consen 320 ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVN 363 (428)
T ss_pred HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhh
Confidence 8888999999999999999999876 456667777664
No 83
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.85 E-value=3.2e-07 Score=99.43 Aligned_cols=128 Identities=10% Similarity=0.061 Sum_probs=82.6
Q ss_pred cccccc-ccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeecc-CCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 039263 45 TYMFGL-YSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEI-TPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKP 121 (492)
Q Consensus 45 ~Y~fS~-ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~-~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~ 121 (492)
.|.+.. ....+++++|+|+++...+........+ ..+++|++.|| +|+|.++.+|.++..+|+.++... . +
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~--~---~- 110 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS--G---H- 110 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--c---c-
Confidence 344444 4556678999999987775333333333 35689999999 599999999999999998665532 1 1
Q ss_pred hhHHHHHHHHHhhccccchhhhhhhhhhhhcCCC---CCceeeehhHhhhhhHHHHHHHH
Q 039263 122 QVWQMCLYICIGANSQSFANTGALVTCVKNFPES---RGSVLGLLKGFVGLSGAILTQLY 178 (492)
Q Consensus 122 ~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~---RG~a~Gi~~a~~GLsa~i~s~i~ 178 (492)
..+.+.....+.|.|.+...........++||++ |+.+.++.-.+..+|+.+-..+.
T Consensus 111 ~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~ 170 (500)
T PRK09584 111 DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLAT 170 (500)
T ss_pred cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 1233333334556777776666667788999864 33456655566666665443333
No 84
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.79 E-value=8.4e-07 Score=92.48 Aligned_cols=337 Identities=16% Similarity=0.138 Sum_probs=206.4
Q ss_pred chHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 27 ~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
+.|..+.+=.+..++.|+ -+.-.--=||+.+.+|.|.++.... +.........+++-..+.||+.+|.+++...+++.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 444444444555666777 5888888899999999999999885 55555555568999999999999999887777777
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
+|-.+..++ ++++.+.+-=++.|...|.+...+...+.|-=| +|||.+.|++.++.-++- +.
T Consensus 90 ~~n~l~alA-------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~-v~--------- 152 (394)
T COG2814 90 VSNLLSALA-------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLAT-VL--------- 152 (394)
T ss_pred HHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHH-HH---------
Confidence 776543322 346766666677788888888888888888886 589999999877764421 11
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHH
Q 039263 184 DNSKALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLI 263 (492)
Q Consensus 184 ~~~~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 263 (492)
..++=..++-.+ +-..+|. .++ .++ ++.. ..+
T Consensus 153 ------------GvPLGt~ig~~~----------GWR~~F~---~ia-~l~---ll~~-------------------~~~ 184 (394)
T COG2814 153 ------------GVPLGTFLGQLF----------GWRATFL---AIA-VLA---LLAL-------------------LLL 184 (394)
T ss_pred ------------hccHHHHHHHHh----------hHHHHHH---HHH-HHH---HHHH-------------------HHH
Confidence 111111111000 1112222 110 000 0000 000
Q ss_pred HHhhhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHH
Q 039263 264 LLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDML 343 (492)
Q Consensus 264 ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FW 343 (492)
....| |. ++++ +...+-.+..+.+|+|+-|
T Consensus 185 ~~~lP-----~~----------------~~~~-----------------------------~~~~~~~~~~~~l~~p~v~ 214 (394)
T COG2814 185 WKLLP-----PS----------------EISG-----------------------------SLPGPLRTLLRLLRRPGVL 214 (394)
T ss_pred HHhCC-----Cc----------------cCCC-----------------------------CCCcchhHHHHHhcCchHH
Confidence 01111 00 0000 0001112457899999999
Q ss_pred HHHHHHHhhccceeEEecchhHHHhhc-CCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHH
Q 039263 344 IIFIATTCGVGGTLTAIDNLGQIGSSL-GYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSC 422 (492)
Q Consensus 344 llf~~~~~~~g~Gl~~i~n~~~I~~sl-g~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~ 422 (492)
..+++.++..+..-+.-.=++++-++. |.+....+...-++.++..+|-+..|.++|| .. |. .+.....++.
T Consensus 215 ~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~-----~~-~l~~~~~l~a 287 (394)
T COG2814 215 LGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GP-----RR-ALIAALLLLA 287 (394)
T ss_pred HHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cc-----hh-HHHHHHHHHH
Confidence 999999999988888777888888875 6677777888899999999999999999998 32 22 2333344444
Q ss_pred HHHHHHHh-cCCch-hHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcc----cccccceehhhHHHHHHh
Q 039263 423 VGHPFIAY-GIPNS-LYAASVIIGFCFGAQWPLLFAIISEIFGLKYYS----TLYNFGAVASPVGAYILN 486 (492)
Q Consensus 423 ~~~ll~~~-~~~~~-l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g----~nyg~~~la~~~gs~l~~ 486 (492)
+..+.+.+ ..... ......+.|+..+...-....-.++ .-+++-. .|-..+.++..+|+.+-.
T Consensus 288 ~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG 356 (394)
T COG2814 288 LALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGG 356 (394)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443322 22222 2333334566666666666666666 4344433 333444555555554443
No 85
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.77 E-value=3.5e-07 Score=97.87 Aligned_cols=333 Identities=17% Similarity=0.157 Sum_probs=184.9
Q ss_pred cHHHHHhhC--CChhhhhHH-H---HHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhH
Q 039263 52 SSDIKTSLG--YDQSTLNLL-S---FSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVW 124 (492)
Q Consensus 52 s~~L~~~~~--~sq~~l~~i-s---~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~ 124 (492)
.+.+.++|| .+.++++++ + .+..+|+.+ .+.+|.+.||+|+|..+.+..++..++-.++..+.. .++ ..
T Consensus 42 n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~--~~~--~e 117 (485)
T KOG0569|consen 42 NETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS--APS--FE 117 (485)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--hhh--HH
Confidence 355566888 444445554 3 334455555 578899999999999999888888888766654432 222 23
Q ss_pred HHHHHH-HHhhccccchhhhhhhhhhhhcCCC-CCceeeehhHhhhhhHHHHHHHHHH-HcCCChh-HHHHHHHHHHHHH
Q 039263 125 QMCLYI-CIGANSQSFANTGALVTCVKNFPES-RGSVLGLLKGFVGLSGAILTQLYHA-FYGDNSK-ALILLIAWLPAAI 200 (492)
Q Consensus 125 ~l~~~~-~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~~a~~GLsa~i~s~i~~~-~f~~~~~-~fllfla~~~~~v 200 (492)
+..++ ++.|..++......-+--..-=|++ ||.+.-...-++.+|-.+-..+..- +++++.. -|+++....|.++
T Consensus 118 -~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~ 196 (485)
T KOG0569|consen 118 -MLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALL 196 (485)
T ss_pred -HHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHH
Confidence 33343 5677777777777777777888975 9988877666655554444333333 3433222 4777777777777
Q ss_pred HHhhhhccccccc---cccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhh
Q 039263 201 SFVFLRTFRIIKI---VRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEI 277 (492)
Q Consensus 201 ~~~~~~~i~~~~~---~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~ 277 (492)
.++..++...-|. .++++++++-+ ..
T Consensus 197 ~l~~l~~~PESPk~Ll~~k~~~~~A~~---------------------------------------------------sl 225 (485)
T KOG0569|consen 197 QLALLPFLPESPKYLLIKKGDEEEARK---------------------------------------------------AL 225 (485)
T ss_pred HHHHHhcCCCCcchHHHHcCCHHHHHH---------------------------------------------------HH
Confidence 6666555432221 00000011100 00
Q ss_pred hhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcch----hHHHHHHHHHhhc
Q 039263 278 SLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSI----DMLIIFIATTCGV 353 (492)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~----~FWllf~~~~~~~ 353 (492)
+- ++++++++++. +++....++ ++.+++++.+++|+++++ ..++...+.++..
T Consensus 226 ~~-------y~G~~~~~~~~--------------e~~~~e~~~--~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq 282 (485)
T KOG0569|consen 226 KF-------YRGKEDVEAEI--------------EEMLREIEE--EELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQ 282 (485)
T ss_pred HH-------HhCCCcchhHH--------------HHHHHHHHH--hccccccCCcHHHHhcCcchhHHHHHHHHHHHHHH
Confidence 00 00000000000 000000000 001112356888888864 3556666777777
Q ss_pred cceeEEec-chhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHH---
Q 039263 354 GGTLTAID-NLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIA--- 429 (492)
Q Consensus 354 g~Gl~~i~-n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~--- 429 (492)
.+|...++ ..-.|-++.|.+..++...-...++.|....+++.++-||++|| ..+.+...++.+..+++.
T Consensus 283 ~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR------pLll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 283 FSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR------PLLLISLSLMAVALLLMSIAL 356 (485)
T ss_pred hcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------HHHHHHHHHHHHHHHHHHHHH
Confidence 77777666 46677778898877777777888999999999999999999643 344444444444333221
Q ss_pred --hcCC-chh-H---HHHHHHHhhhcchhh-hHHHHHHHhhcCCCccc
Q 039263 430 --YGIP-NSL-Y---AASVIIGFCFGAQWP-LLFAIISEIFGLKYYST 469 (492)
Q Consensus 430 --~~~~-~~l-~---~~~~liG~~~G~~~~-~~P~i~se~FG~k~~g~ 469 (492)
.... ... | .+..+..+.|+.-.+ +-.-+++|+|..++=++
T Consensus 357 ~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~a 404 (485)
T KOG0569|consen 357 FLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSA 404 (485)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHH
Confidence 1111 111 1 222233444444322 33357899998765443
No 86
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.75 E-value=2.2e-07 Score=98.73 Aligned_cols=127 Identities=14% Similarity=0.036 Sum_probs=95.6
Q ss_pred hCcccccccccHHHHHhhCCChhh-hhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 039263 42 AGATYMFGLYSSDIKTSLGYDQST-LNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIP 119 (492)
Q Consensus 42 ~Gt~Y~fS~ys~~L~~~~~~sq~~-l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~ 119 (492)
.-.--..|+-.|+|++.+|+|++| .+.+..+...+= ..-+++|++.||+|+|+++.++.+...+-+.++..+ .
T Consensus 39 ~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa-----~ 113 (511)
T TIGR00806 39 AQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG-----T 113 (511)
T ss_pred HHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-----H
Confidence 333456777889999999999999 777744444333 358999999999999999999988777666554432 2
Q ss_pred CchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHH
Q 039263 120 KPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQ 176 (492)
Q Consensus 120 ~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~ 176 (492)
+++.+.+.=++-|.+.+... +......+|||. +||+++|+..+..-+|.++-..
T Consensus 114 --Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~ 168 (511)
T TIGR00806 114 --SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSV 168 (511)
T ss_pred --HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24556556666677788877 999999999985 7999999988777676666544
No 87
>PRK09669 putative symporter YagG; Provisional
Probab=98.73 E-value=1.4e-07 Score=100.23 Aligned_cols=136 Identities=11% Similarity=0.105 Sum_probs=76.7
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCcc-chhhhHHHhhhhhhhcccchhhHHHhhhcCCCc
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARST-TTFVSLVSIWNYLGRVVAGFASEILLKKYKIPR 410 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~-~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R 410 (492)
..++.+|++.||.+.+..++.... ....+..............+. +.......+...+|.++++.++||++||+
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~---- 295 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLTA-VVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR---- 295 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHH-HHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH----
Confidence 457889999999987665443211 111122222111111111222 22223445667788899999999987653
Q ss_pred hHHHHHHHHHHHH-HHHHHHhcC--CchhHHHHHHHHhhhcchhhhHHHHHHHhh-------cCCCcccccccc
Q 039263 411 PLLFTFVLLFSCV-GHPFIAYGI--PNSLYAASVIIGFCFGAQWPLLFAIISEIF-------GLKYYSTLYNFG 474 (492)
Q Consensus 411 ~~~l~i~~~l~~~-~~ll~~~~~--~~~l~~~~~liG~~~G~~~~~~P~i~se~F-------G~k~~g~nyg~~ 474 (492)
.+.+..+...+ ...++.... ...+++..++.|+++|....+..++++|.. |.|.-|..++..
T Consensus 296 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~ 367 (444)
T PRK09669 296 --AFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTN 367 (444)
T ss_pred --HHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHH
Confidence 22222222222 221222211 223566777889999999999999999987 666666666663
No 88
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.70 E-value=2.3e-06 Score=92.12 Aligned_cols=126 Identities=12% Similarity=0.056 Sum_probs=88.6
Q ss_pred cccccHHHHHh--hCCChhhhhHHHHHhhhhc-cccccceeeecc-CCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 48 FGLYSSDIKTS--LGYDQSTLNLLSFSKDVGG-NVGVLSGLINEI-TPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 48 fS~ys~~L~~~--~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~-~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
++.....++++ +|+++.|.+.+......+. ...+++|++.|| +|+|.++.+|.++..+|+.++... ++ .
T Consensus 30 ~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~-----~~--~ 102 (475)
T TIGR00924 30 QGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS-----IY--P 102 (475)
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-----cc--H
Confidence 44455566777 9999999998744444444 458899999999 799999999999999998765532 22 3
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcCC----CCCceeeehhHhhhhhHHHHHHHHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFPE----SRGSVLGLLKGFVGLSGAILTQLYHA 180 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~----~RG~a~Gi~~a~~GLsa~i~s~i~~~ 180 (492)
+.+.....+.|.|.+....+.-....++||+ +|+.+.++.-....+|+++=..+...
T Consensus 103 ~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 103 DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred hHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 3344344456778787777777778899985 38888888666666665544444433
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.69 E-value=2.7e-06 Score=92.00 Aligned_cols=139 Identities=13% Similarity=0.106 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHhhCc-cccc-ccccHHHHHhhCCChhhhhHHHHHhh-hhccccccceeeecc-CCcHHHHHHHHHHHH
Q 039263 29 WFMVFASLLIMAVAGA-TYMF-GLYSSDIKTSLGYDQSTLNLLSFSKD-VGGNVGVLSGLINEI-TPPWVVLAIGSIMNF 104 (492)
Q Consensus 29 w~~l~a~~~i~l~~Gt-~Y~f-S~ys~~L~~~~~~sq~~l~~is~~~~-vg~~~~~~~G~~~D~-~Gpr~~~~iG~vl~~ 104 (492)
|..+.....+..+-.. -|.+ +.....+++.+|+++++.+++..... +.....+++|++.|| +|+|.+.++|.++..
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~ 92 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLA 92 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHH
Confidence 3334444444444333 3433 45566778899999999888643333 444457899999999 999999999999999
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCC---CCceeeehhHhhhhhHHH
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPES---RGSVLGLLKGFVGLSGAI 173 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~---RG~a~Gi~~a~~GLsa~i 173 (492)
+|+....+. . +.+ ..+.....+.+.|.+...........++||++ |+.+-++.-....+|+++
T Consensus 93 ~g~~~~~~~--~---~~~-~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~ 158 (489)
T PRK10207 93 IGYFMTGMS--L---LKP-DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI 158 (489)
T ss_pred HHHHHHHHh--c---cch-hHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH
Confidence 998766533 1 111 22333445567888888877778888999854 366666666666666553
No 90
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=2.2e-07 Score=100.18 Aligned_cols=327 Identities=18% Similarity=0.091 Sum_probs=173.6
Q ss_pred HHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHH-HHHhcCCCCchhHHHHHHHHH
Q 039263 55 IKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIW-LAVTGRIPKPQVWQMCLYICI 132 (492)
Q Consensus 55 L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~-~~~~g~i~~~~~~~l~~~~~l 132 (492)
+++..+....|++.+.+...++=. ..+|+|.+.||+++...+..-++ .+.++. +... .. +++.++..-++
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~----~w~~~~~~~~~--~~--s~~~~ialr~l 143 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGI----LWGLFGFLTAA--VH--SFPGLIALRFL 143 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHH----HHHHHHHHHHH--Hh--hhHHHHHHHHH
Confidence 678888899999998666666554 47899999999995554432222 222221 1111 22 24556555455
Q ss_pred hhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHhhhhccccc
Q 039263 133 GANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWLPAAISFVFLRTFRII 211 (492)
Q Consensus 133 ~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~~~~v~~~~~~~i~~~ 211 (492)
.|.-.+....+.....-+||. ++||+..|+..+.-++|+.+=+.|..++++=|.. ..
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~--------------------~~-- 201 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS--------------------GG-- 201 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC--------------------CC--
Confidence 555556666788888889995 6899999999998888888877777776541000 00
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCCCCccccCC
Q 039263 212 KIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSKKPSLEDAN 291 (492)
Q Consensus 212 ~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (492)
..+-+..|. + -+ +..++..+ +..+.+| ++++.-. -.+++
T Consensus 202 ----~~gW~~~Fi----I-~G--~i~~~~gi-------------------~~f~~lp------~~P~~~~----fl~~~- 240 (495)
T KOG2533|consen 202 ----LAGWRWLFI----I-EG--VITLVLGI-------------------VVFFFLP------DNPSKAW----FLTDE- 240 (495)
T ss_pred ----cCCceeehh----H-HH--HHHHHHHh-------------------eEEEEec------CChhhcc----ccchH-
Confidence 001111121 1 00 00000000 0001111 0000000 00000
Q ss_pred CCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhh-c
Q 039263 292 SHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSS-L 370 (492)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~s-l 370 (492)
|++ ...++.+ +++. +...++ .+-..++|.+++|..|.+.+..+|....--.+.+-+-.+-++ .
T Consensus 241 ek~-~~~~~~~----~~~~--------~~~~~~---~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~ 304 (495)
T KOG2533|consen 241 EKE-LVVERLR----ESPS--------GGIENK---FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG 304 (495)
T ss_pred HHH-HHHHHHH----hccC--------CCcccc---cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCC
Confidence 000 0000000 0000 000011 124578899999999999999999766544444445555666 4
Q ss_pred CCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcc
Q 039263 371 GYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGA 449 (492)
Q Consensus 371 g~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~ 449 (492)
|++..++..+-..+.+...+|=++.|++|||+..-. ..|..+.+...+...+++..+.... .... ..++-+|.
T Consensus 305 ~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~-----~~~~~~~~ 378 (495)
T KOG2533|consen 305 GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-ARRLLFIVFLCLYAIIGAISLLAAAVLPGA-----YGAFLIGP 378 (495)
T ss_pred CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHhhccchHH-----hHHHHhcc
Confidence 577777888889999999999999999999964100 0233444555566666643332211 1111 11122333
Q ss_pred hhhhHHHHHHHhhcCCCcccccccc
Q 039263 450 QWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 450 ~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
.....+..+.+.+=.++..-|++-+
T Consensus 379 ~~~~~~~~~~~~w~s~~~~g~~k~~ 403 (495)
T KOG2533|consen 379 YGLIATAIIALSWTSANLAGNTKAL 403 (495)
T ss_pred hhhHHHHHHHHhhccccccchHHhH
Confidence 3333445555555555555555543
No 91
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.59 E-value=1.7e-06 Score=90.07 Aligned_cols=137 Identities=7% Similarity=-0.081 Sum_probs=83.6
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHH-hhhhhhhcccchhhHHHhhhcCCCc
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVS-IWNYLGRVVAGFASEILLKKYKIPR 410 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~S-i~N~~GRl~~G~lSD~~~~~~~~~R 410 (492)
+.++.+|++.+|.+....++...+-..+..-.....++.|++.++.+...++.. +....|++..|.+.||+++|+
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~---- 275 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR---- 275 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH----
Confidence 467899999998777655554332222222344556678888777777777665 467789999999999997653
Q ss_pred hHHHHHHHHHHHHHH-HHHHhc-----CCc-hhHHHHHHHHhhhcchhhhHHHHHHHhhcC-CCcccccccc
Q 039263 411 PLLFTFVLLFSCVGH-PFIAYG-----IPN-SLYAASVIIGFCFGAQWPLLFAIISEIFGL-KYYSTLYNFG 474 (492)
Q Consensus 411 ~~~l~i~~~l~~~~~-ll~~~~-----~~~-~l~~~~~liG~~~G~~~~~~P~i~se~FG~-k~~g~nyg~~ 474 (492)
.+.+..++..+.. ..+... ... .++....+.+++.|..+..+.+.+.+..+. ++.|+.+++.
T Consensus 276 --~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 345 (390)
T TIGR02718 276 --TFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAV 345 (390)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 2222222221111 111111 111 123333444677888888888888888886 7778877764
No 92
>PRK09848 glucuronide transporter; Provisional
Probab=98.58 E-value=8.3e-07 Score=94.33 Aligned_cols=149 Identities=13% Similarity=0.087 Sum_probs=79.5
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHhh-cCCCCCccchhhhH-HHhhhhhhhcccchhhHHHhhhcCCC
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSS-LGYPARSTTTFVSL-VSIWNYLGRVVAGFASEILLKKYKIP 409 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~s-lg~~~~~~~~~Vsl-~Si~N~~GRl~~G~lSD~~~~~~~~~ 409 (492)
.+++.+|++.|+.+.+..++....-...........+. ++.++. .+..... ..+...++...++.++||+++|
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~---- 294 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGL-FTVLVLVQNLVGTVASAPLVPGMVARIGKK---- 294 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCcH----
Confidence 46788999999988776555433211111112222222 333221 1111111 1344555666777777777433
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCC---chhHHHHHHHHhhhcchhhhHHHHHHHhh-------cCCCcccccccce----
Q 039263 410 RPLLFTFVLLFSCVGHPFIAYGIP---NSLYAASVIIGFCFGAQWPLLFAIISEIF-------GLKYYSTLYNFGA---- 475 (492)
Q Consensus 410 R~~~l~i~~~l~~~~~ll~~~~~~---~~l~~~~~liG~~~G~~~~~~P~i~se~F-------G~k~~g~nyg~~~---- 475 (492)
..+.+..++..++.+++...+. ..+++..++.|++.|.......++.+|.= |.|+-|..++...
T Consensus 295 --~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~k 372 (448)
T PRK09848 295 --NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRK 372 (448)
T ss_pred --HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHH
Confidence 3344455555555544433221 12345566778888888888888877753 5566677776643
Q ss_pred ehhhHHHHHHhh
Q 039263 476 VASPVGAYILNV 487 (492)
Q Consensus 476 la~~~gs~l~~~ 487 (492)
+++.+|+.+...
T Consensus 373 lg~aig~~i~g~ 384 (448)
T PRK09848 373 CGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHH
Confidence 444555444433
No 93
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.58 E-value=7.5e-07 Score=95.66 Aligned_cols=134 Identities=10% Similarity=0.108 Sum_probs=76.3
Q ss_pred HHHhcchhHHHHHHHHHhhccceeEEecchhH-HHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchH
Q 039263 334 LQALFSIDMLIIFIATTCGVGGTLTAIDNLGQ-IGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPL 412 (492)
Q Consensus 334 ~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~-I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~ 412 (492)
++.++++.|+.+....++..... ...+.... ..+....+....+...++..+...++-++++.++||++||+
T Consensus 225 ~~~~~n~~~~~ll~~~~~~~~~~-~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~------ 297 (473)
T PRK10429 225 ALIYKNDQLSCLLGMALAYNIAS-NIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI------ 297 (473)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHH-HHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH------
Confidence 44568888887766554433211 11111111 11111112222334445556778888889999999997653
Q ss_pred HHHHHHHHHHHHHHHHH---hcCC---chhHHHHHHHHhhhcchhhhHHHHHHHh-------hcCCCcccccccc
Q 039263 413 LFTFVLLFSCVGHPFIA---YGIP---NSLYAASVIIGFCFGAQWPLLFAIISEI-------FGLKYYSTLYNFG 474 (492)
Q Consensus 413 ~l~i~~~l~~~~~ll~~---~~~~---~~l~~~~~liG~~~G~~~~~~P~i~se~-------FG~k~~g~nyg~~ 474 (492)
.+.+..++.+++.+.+. .... ..+.+..++.|+++|..+.+.+++++|. .|.|+-|..|++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~ 372 (473)
T PRK10429 298 LWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQ 372 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHH
Confidence 22233333333322211 1111 1345566778999999999999999999 7777777777774
No 94
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.43 E-value=1.4e-09 Score=115.03 Aligned_cols=103 Identities=18% Similarity=0.175 Sum_probs=75.7
Q ss_pred hhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHhhccccchhh
Q 039263 65 TLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPK-PQVWQMCLYICIGANSQSFANT 142 (492)
Q Consensus 65 ~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~-~~~~~l~~~~~l~g~g~~~~~~ 142 (492)
+.+++..+..+|..+ ++..|.+.||+|+|.++.++.++..+|..+.. ..+. .+.+.++..-.+.|.|.|..++
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~R~~~G~~~g~~~~ 121 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIA-----FAPSYNNFWMLLIGRFLIGFGIGGAYV 121 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccc
Confidence 455667777888876 78999999999999999999999988875433 2220 0245455555677888888877
Q ss_pred hhhhhhhhhcCC-CCCceeeehhHhhhhhHH
Q 039263 143 GALVTCVKNFPE-SRGSVLGLLKGFVGLSGA 172 (492)
Q Consensus 143 a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~ 172 (492)
.........=|+ +||....+...+..+|..
T Consensus 122 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~ 152 (451)
T PF00083_consen 122 VSPIYISEIAPPKHRGFLSSLFQLFWALGIL 152 (451)
T ss_pred ccccccccccccccccccccccccccccccc
Confidence 777777777764 799999988777665533
No 95
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.37 E-value=6.1e-06 Score=83.94 Aligned_cols=133 Identities=14% Similarity=0.128 Sum_probs=92.7
Q ss_pred HHhcchhHHHHHHHHHhhccceeEEecchhHHHhh---cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCch
Q 039263 335 QALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSS---LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRP 411 (492)
Q Consensus 335 ~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~s---lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~ 411 (492)
+.+|++++|+..+.+++-.|....+-+......+. +|+++.+.+..++.+..+-.+||++.+.+.||+++|+
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~----- 209 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR----- 209 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-----
Confidence 46889999999888888887766555545555542 4777778888899999999999999999999996543
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 412 LLFTFVLLFSCVGHPFIAYGIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 412 ~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
.+.+..++.++..++..............++|++.+..+...-+...+.++ +|-++.-+++
T Consensus 210 -~l~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~ 270 (310)
T TIGR01272 210 -YLAFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL 270 (310)
T ss_pred -HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH
Confidence 233333444444333323222333446668899999999998888888887 4445444443
No 96
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.35 E-value=2.5e-05 Score=80.02 Aligned_cols=316 Identities=15% Similarity=0.103 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHH
Q 039263 29 WFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFG 106 (492)
Q Consensus 29 w~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~G 106 (492)
|+.+++-+++.+..=+ .-+-+--=+++++.+|.|-++.+++ +.=....+.+++++..+..|+|++..+..+-++..+|
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 6666666666655544 3455556678899999999998887 4445556678999999999999999999999999888
Q ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcCCCh
Q 039263 107 YFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNS 186 (492)
Q Consensus 107 y~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~ 186 (492)
-.+ ....+ .+.+..=..++|.|++..+.=-=...-|+||+|-|..+|+-..-.+.++++-+.+.
T Consensus 91 ~~i------R~~~~--~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~la-------- 154 (395)
T COG2807 91 ILI------RSLGG--LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALA-------- 154 (395)
T ss_pred HHH------Hhccc--HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhh--------
Confidence 531 22221 33343335667777776655222223489999999999997766666655543211
Q ss_pred hHHHHHHHHHHHHHHHhhhhccccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHh
Q 039263 187 KALILLIAWLPAAISFVFLRTFRIIKIVRQANELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLF 266 (492)
Q Consensus 187 ~~fllfla~~~~~v~~~~~~~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~ 266 (492)
+ ++.++. .+-+.....+... ..++ ++.-
T Consensus 155 ----------v--------pla~~~-----~gW~~aL~~WAl~-----------allA------------------l~~W 182 (395)
T COG2807 155 ----------V--------PLAQHS-----GGWRGALGFWALL-----------ALLA------------------LLIW 182 (395)
T ss_pred ----------h--------HHHHhh-----ccHHHHHHHHHHH-----------HHHH------------------HHHH
Confidence 0 011000 0001111100000 0000 0001
Q ss_pred hhhhhhhHHhhhhccCCCCccccCCCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHH
Q 039263 267 LPIAIVIKEEISLRKSKKPSLEDANSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIF 346 (492)
Q Consensus 267 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf 346 (492)
.| +. +++ +.+ . .+. + .++-....|++.=|.+=
T Consensus 183 lP------q~---~r~---------~~~-------~------------------~~~-~----~~~~~~vw~~~~aW~vt 214 (395)
T COG2807 183 LP------QA---LRE---------QAA-------S------------------IAT-K----LVSVRKVWRSPLAWQVT 214 (395)
T ss_pred hh------hc---ccc---------ccc-------c------------------ccc-c----cccccccccCchhHHHH
Confidence 11 10 000 000 0 000 0 01112457777777666
Q ss_pred HHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHH
Q 039263 347 IATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHP 426 (492)
Q Consensus 347 ~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~l 426 (492)
+-+-..+..--.++.=+-+|.++.|+++.+++..+++..+.....-+..-.+-+|..+ +|++ .+...+.+.++..
T Consensus 215 LfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n----~r~~-~~~~~~~~l~G~~ 289 (395)
T COG2807 215 LFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKN----QRPL-VVLALLLMLVGLV 289 (395)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcc----cchH-HHHHHHHHHHHHH
Confidence 5555555544455566889999999999999999999999999988888888777432 3444 4444555555554
Q ss_pred HHHhcCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCC
Q 039263 427 FIAYGIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLK 465 (492)
Q Consensus 427 l~~~~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k 465 (492)
-+.+.+....+.-.++.|++.|+.|++.=.++.+..-..
T Consensus 290 G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a 328 (395)
T COG2807 290 GLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDA 328 (395)
T ss_pred HHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCCh
Confidence 343444444444478999999999999988888877543
No 97
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.27 E-value=5.4e-06 Score=85.09 Aligned_cols=134 Identities=16% Similarity=0.103 Sum_probs=93.8
Q ss_pred cccccccccHH-HHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 039263 44 ATYMFGLYSSD-IKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKP 121 (492)
Q Consensus 44 t~Y~fS~ys~~-L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~ 121 (492)
..+.+..+.|. +++++|+++.+.+.+.....++.. .+++.|++.||+|+|....++.++..++..++........ .
T Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 298 (385)
T TIGR00710 221 GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGL--G 298 (385)
T ss_pred HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--c
Confidence 34555556665 456899999998887555555554 4789999999999999988888877777665553321111 1
Q ss_pred hhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHH
Q 039263 122 QVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYH 179 (492)
Q Consensus 122 ~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~ 179 (492)
+.+.+.....+.|.|.+..+........+.+|++||.+.++........+.+..++..
T Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 299 SWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333445566777777777778888889999999999877665566777777655
No 98
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.14 E-value=6.5e-05 Score=81.64 Aligned_cols=322 Identities=16% Similarity=0.115 Sum_probs=182.6
Q ss_pred hhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhh
Q 039263 65 TLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTG 143 (492)
Q Consensus 65 ~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a 143 (492)
+.+++.....+|+.+ .++.|++.|++|+|.+++++.+++.+|+.+...+. + ++.+..--++.|.|.|.....
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~-----~--~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP-----S--WYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh-----h--HHHHHHHHHHhccchhhhhhc
Confidence 457888888888876 88999999999999999999999999998777553 2 444554556788888887655
Q ss_pred hhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCC--hhHHHHHHHHHHHHHHHhhhhcccccccc--ccch
Q 039263 144 ALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDN--SKALILLIAWLPAAISFVFLRTFRIIKIV--RQAN 218 (492)
Q Consensus 144 ~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~--~~~fllfla~~~~~v~~~~~~~i~~~~~~--~~~~ 218 (492)
+-.....-=|. .||..+.+..-+.. .+..+..+.+.+.+++ .=++.+.+...|.++-.+++.++..-|.. ++..
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~-~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~ 241 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFIT-IGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGR 241 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHH-HHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCC
Confidence 55555555575 79999998877776 5566666666666654 22355666666666655554443211110 0000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhcccccCccchhhhhHHHHHHHhhhhhhhhHHhhhhccCCCCccccCCCCCcccc
Q 039263 219 ELKIFYKMLYISLGLAGFLMVVIILQNKYAFKRFEYVGSASLVLILLFLPIAIVIKEEISLRKSKKPSLEDANSHPELKI 298 (492)
Q Consensus 219 ~~~~f~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (492)
.++.-. . +......++ ++ .+.+...
T Consensus 242 ~~~a~~----~-------------l~~l~g~~~---------------------------------~~-----~~~~~~~ 266 (513)
T KOG0254|consen 242 LEEAKR----S-------------LKRLRGLSP---------------------------------ED-----VEVELEL 266 (513)
T ss_pred hHHHHH----H-------------HHHHhCCCC---------------------------------cc-----hHHHHHH
Confidence 000000 0 000000000 00 0000000
Q ss_pred ccCCCCCCCCCCccccccccccccCCCCCCCcccHH----HHhcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCC
Q 039263 299 VTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTIL----QALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPA 374 (492)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~----~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~ 374 (492)
.+ .....+ ......+..+. +..+++-++..-+..+.....=-.+++-..+|.+..|..+
T Consensus 267 ~~--------------~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~ 329 (513)
T KOG0254|consen 267 LK--------------IKLLVE---AEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKS 329 (513)
T ss_pred HH--------------HHHHHh---hhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCC
Confidence 00 000000 00000000111 2345556666666666666333566777889988888764
Q ss_pred CccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc----C--------CchhH-HHHH
Q 039263 375 RSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG----I--------PNSLY-AASV 441 (492)
Q Consensus 375 ~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~----~--------~~~l~-~~~~ 441 (492)
.. .....+.++.|.++=++..++-||++| ...+......|.++++++... . ...+. ....
T Consensus 330 ~~-~~~~~~~~~v~~~~t~~~~~lvd~~gR------r~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (513)
T KOG0254|consen 330 DT-FLASIILGVVNFLGTLVATYLVDRFGR------RKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLC 402 (513)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHH
Confidence 43 445577788899998999999999954 446666666666666543211 1 01122 2222
Q ss_pred HHHhhhcchhhhHHH-HHHHhhcCCCccccccc
Q 039263 442 IIGFCFGAQWPLLFA-IISEIFGLKYYSTLYNF 473 (492)
Q Consensus 442 liG~~~G~~~~~~P~-i~se~FG~k~~g~nyg~ 473 (492)
+.-.+|...++-.|- +.+|+|=.|.-++-.++
T Consensus 403 ~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~ 435 (513)
T KOG0254|consen 403 LFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASL 435 (513)
T ss_pred HHHHHHhcccccchhhhhhccCcHhHHhhhHHH
Confidence 224456666666676 66999976654544444
No 99
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.14 E-value=0.0002 Score=77.46 Aligned_cols=132 Identities=11% Similarity=0.106 Sum_probs=81.7
Q ss_pred ccccccccc-HHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccC-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 039263 44 ATYMFGLYS-SDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEIT-PPWVVLAIGSIMNFFGYFMIWLAVTGRIPK 120 (492)
Q Consensus 44 t~Y~fS~ys-~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~-Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~ 120 (492)
+.|.+..+- .-+++++|+++.+...+........+ ..+++|++.||+ |+|.++++|.++..+|+.++.. .+. +
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~--~~~--~ 99 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA--SEI--H 99 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH--hhc--c
Confidence 456555444 44567799999998887544445554 477999999999 9999999999999999865431 111 1
Q ss_pred chhHHHHHHHHHhhccccchhhhhhhhhhhhcCC---CCCceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 121 PQVWQMCLYICIGANSQSFANTGALVTCVKNFPE---SRGSVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 121 ~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~---~RG~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
.....+... +...|.|......-....+.||+ +|..+.++.-....+|+.+- ++...+.
T Consensus 100 ~~~~~l~l~--li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~ia-p~l~g~L 161 (493)
T PRK15462 100 PSFLYLSLA--IIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIA-PIACGYA 161 (493)
T ss_pred hhHHHHHHH--HHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHH-HHHHHHH
Confidence 111111111 22233444333333345688985 48888888766666655444 4443444
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.13 E-value=9.5e-05 Score=79.56 Aligned_cols=123 Identities=16% Similarity=0.167 Sum_probs=83.7
Q ss_pred HhhCcc-cccccccHHHHHhhCCChhhhhHHHHHhhhhccccccceeeeccCC-----cHHHHHHHHHHH-HHHHHHHHH
Q 039263 40 AVAGAT-YMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNVGVLSGLINEITP-----PWVVLAIGSIMN-FFGYFMIWL 112 (492)
Q Consensus 40 l~~Gt~-Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~~~~~G~~~D~~G-----pr~~~~iG~vl~-~~Gy~~~~~ 112 (492)
++-|.. -....-.+-+++++|+|.+|++.+.....+.-.+-++.|.+.||+| +|..++++.++. .+.+..
T Consensus 36 ~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~--- 112 (468)
T TIGR00788 36 FVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGL--- 112 (468)
T ss_pred HHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh---
Confidence 444444 3445667788889999999998887666777677778999999998 777788888766 344322
Q ss_pred HHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhh
Q 039263 113 AVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVG 168 (492)
Q Consensus 113 ~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~G 168 (492)
... .++ ..........+.+.+....|.++=...++..|++++...++...+++
T Consensus 113 -l~~-~~~-~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~ 165 (468)
T TIGR00788 113 -LPG-KVS-SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWG 165 (468)
T ss_pred -ccc-ccc-hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHH
Confidence 211 121 12222235567788888999999999999999555554455545554
No 101
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.13 E-value=4.2e-06 Score=94.60 Aligned_cols=144 Identities=13% Similarity=0.108 Sum_probs=99.9
Q ss_pred HHhcchhHHHHHHHHHhhccc-e--eEEecc-hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCc
Q 039263 335 QALFSIDMLIIFIATTCGVGG-T--LTAIDN-LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPR 410 (492)
Q Consensus 335 ~~l~t~~FWllf~~~~~~~g~-G--l~~i~n-~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R 410 (492)
+.-.++..|.+++.+.++... | ..+++. +.++.+.++.+..+.+...+++.++..+|.+++|+++||++||
T Consensus 158 ~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR----- 232 (742)
T TIGR01299 158 ECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK----- 232 (742)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----
Confidence 344567788776655443322 1 122222 3344456788777778888999999999999999999999654
Q ss_pred hHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHH
Q 039263 411 PLLFTFVLLFSCVGHPFIAYG-IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYI 484 (492)
Q Consensus 411 ~~~l~i~~~l~~~~~ll~~~~-~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l 484 (492)
..+.+..++..++.++..+. ....+++.-.+.|++.|+...+.+++++|++..++-|..++++.+...+|..+
T Consensus 233 -~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~il 306 (742)
T TIGR01299 233 -QCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIY 306 (742)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555544443333 23456777788899999999999999999999999998888766555554433
No 102
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.08 E-value=0.00015 Score=78.68 Aligned_cols=119 Identities=18% Similarity=0.148 Sum_probs=86.4
Q ss_pred cccccHHHH-HhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHH
Q 039263 48 FGLYSSDIK-TSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQ 125 (492)
Q Consensus 48 fS~ys~~L~-~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~ 125 (492)
-+.|+...+ +.++.+....++......+|..+ .++.|.+.||+|+|.+++++.++..++-.. .... .+++.
T Consensus 101 ~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~-----~a~a--~~~~~ 173 (521)
T KOG0255|consen 101 SSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGIL-----TAFA--PNYWM 173 (521)
T ss_pred CCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHH-----HHHh--CcHHH
Confidence 344455544 56666666666667777777776 678899999999999999888877766422 2222 34777
Q ss_pred HHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHH
Q 039263 126 MCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 126 l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~ 174 (492)
++.+=++.|++.+..++.+....+.+++ ++|+.+..+ ..+.-.++.+.
T Consensus 174 ~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~ 222 (521)
T KOG0255|consen 174 FLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLML 222 (521)
T ss_pred HHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHH
Confidence 8888889999999999999999999995 679998888 54443444444
No 103
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.06 E-value=2.8e-05 Score=81.23 Aligned_cols=126 Identities=9% Similarity=0.002 Sum_probs=73.0
Q ss_pred ccccccccH-HHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCch
Q 039263 45 TYMFGLYSS-DIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQ 122 (492)
Q Consensus 45 ~Y~fS~ys~-~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~ 122 (492)
.+.+..+.| .+++++|+++.+.+.+.....+... ..+..|++.||+|+|....++.+...+.+..+ ... .+
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~---~~-- 304 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM--LMA---HS-- 304 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH--HHH---hh--
Confidence 444444455 4667899999988876333333333 36789999999999988777766554443222 111 11
Q ss_pred hHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHH
Q 039263 123 VWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQL 177 (492)
Q Consensus 123 ~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i 177 (492)
.+.......+.+.+.+...........+.+|++||++.++......+|..+-..+
T Consensus 305 ~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l 359 (393)
T PRK15011 305 PAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSL 359 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 2222222233333333322333334467789999999998766555655544433
No 104
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.05 E-value=0.0004 Score=76.48 Aligned_cols=130 Identities=14% Similarity=0.185 Sum_probs=80.1
Q ss_pred ccchHHHHHHHHHHHHhhC--cccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAG--ATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSI 101 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~G--t~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~v 101 (492)
...|.+...+++.+..+.. ..+..+.--+++-+.+|=+ .+..+++++-.++.. ..++.|++.|.+|+|...++|.+
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~ 116 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSL 116 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHH
Confidence 3456555555555544433 1333333335677777754 455666666666654 36789999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCC-CCceeeeh
Q 039263 102 MNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPES-RGSVLGLL 163 (492)
Q Consensus 102 l~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~ 163 (492)
+..+|..+ .+...+ +-.++.=..+.|.|.|......+. ...--|+| |+...++.
T Consensus 117 l~vvG~Iv-----~atA~~--~~~~iag~~l~GvgaG~~~~~~~~-isEl~p~k~R~~~~~~~ 171 (599)
T PF06609_consen 117 LGVVGSIV-----CATAQN--MNTFIAGMVLYGVGAGVQELAALA-ISELVPNKWRGLGLAIA 171 (599)
T ss_pred HHHhHHHH-----hhcCCc--HHHHHHHHHHHHHhhHHHHHHHHH-HHHhcccchhhhHhHHH
Confidence 99999743 344443 344554455666666665554444 34555864 76655443
No 105
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.04 E-value=2.3e-05 Score=81.04 Aligned_cols=109 Identities=20% Similarity=0.286 Sum_probs=82.2
Q ss_pred HHHhhCC--ChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 039263 55 IKTSLGY--DQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYIC 131 (492)
Q Consensus 55 L~~~~~~--sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~ 131 (492)
.+++... .++|++++ +.-..+.-...++.|.+.||.|.|...++|-+..+..-.++. +. . +++.+.+.=.
T Consensus 95 ~~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFa--fg---~--sy~~l~vAR~ 167 (464)
T KOG3764|consen 95 PAEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFA--FG---N--SYPMLFVARS 167 (464)
T ss_pred chhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHH--Hc---c--hhHHHHHHHH
Confidence 4444444 44556665 333333334689999999999999999999998877654433 22 2 2565556678
Q ss_pred HhhccccchhhhhhhhhhhhcCC--CCCceeeehhHhhhhh
Q 039263 132 IGANSQSFANTGALVTCVKNFPE--SRGSVLGLLKGFVGLS 170 (492)
Q Consensus 132 l~g~g~~~~~~a~l~t~~k~FP~--~RG~a~Gi~~a~~GLs 170 (492)
+.|.|+.+++|+.+.-.++-||| +||.+.|+..+|.+||
T Consensus 168 LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG 208 (464)
T KOG3764|consen 168 LQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLG 208 (464)
T ss_pred HhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhcc
Confidence 99999999999999999999996 4799999999999886
No 106
>PRK11462 putative transporter; Provisional
Probab=98.04 E-value=0.00014 Score=78.01 Aligned_cols=108 Identities=10% Similarity=0.053 Sum_probs=62.1
Q ss_pred HhhCCChhhhhHH-HHHhhhhccccccceeeecc----CCcHH-HHHHHHHHHHHHHHHHHHHHhcCCCCc-hhHHHHHH
Q 039263 57 TSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEI----TPPWV-VLAIGSIMNFFGYFMIWLAVTGRIPKP-QVWQMCLY 129 (492)
Q Consensus 57 ~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~----~Gpr~-~~~iG~vl~~~Gy~~~~~~~~g~i~~~-~~~~l~~~ 129 (492)
+.+|++...++++ .+.-..-...-+..|.+.|| +|+|. -+++|++...+.+.++|.. -+.-... ..|.+..|
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~-p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST-PDLSMNGKMIYAAITY 116 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC-CCCCcchHHHHHHHHH
Confidence 6789999988886 55555555567889999997 47654 4567888888887766632 1110111 12333222
Q ss_pred HHH--hhccccchhhhhhhhhhhhcCCCCCceeeehhHh
Q 039263 130 ICI--GANSQSFANTGALVTCVKNFPESRGSVLGLLKGF 166 (492)
Q Consensus 130 ~~l--~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~ 166 (492)
.+. +-.-...-|. ++...+..=||+|..+++.-..+
T Consensus 117 ~~~~~~~t~~~ipy~-al~~~lt~d~~eRt~l~s~r~~~ 154 (460)
T PRK11462 117 TLLTLLYTVVNIPYC-ALGGVITNDPTQRISLQSWRFVL 154 (460)
T ss_pred HHHHHHHHHHhccHH-HHHHHhcCCHHHHHHHHHHHHHH
Confidence 221 1111112222 35555544488999888865433
No 107
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.04 E-value=1.8e-05 Score=79.23 Aligned_cols=133 Identities=23% Similarity=0.314 Sum_probs=100.8
Q ss_pred cccccccccHHHHHhh-CCChhhhhHHHHHhhhhccc-cccceeeeccCCcHH-HHHHHHHHHHHHHHHHHHHHhcCCCC
Q 039263 44 ATYMFGLYSSDIKTSL-GYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWV-VLAIGSIMNFFGYFMIWLAVTGRIPK 120 (492)
Q Consensus 44 t~Y~fS~ys~~L~~~~-~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~-~~~iG~vl~~~Gy~~~~~~~~g~i~~ 120 (492)
....+..+.++..++. |+++.+.+.+.....++... .+..|++.||+|+|. ...++.++..+++.++... .+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~ 264 (352)
T cd06174 190 GYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA-----PS 264 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-----cc
Confidence 3455566666666654 99999998876666666654 788899999999999 8888999888887655422 11
Q ss_pred chhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 121 PQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 121 ~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
.+.......+.|.+.+..++.......+.+| ++||++.|+......++..+...+.....+
T Consensus 265 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 265 --LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred --HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3445555666777788888888888999999 689999999988888888887777766664
No 108
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.97 E-value=3.4e-05 Score=83.16 Aligned_cols=132 Identities=16% Similarity=0.104 Sum_probs=73.5
Q ss_pred hCcccccccccHHHH-HhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 039263 42 AGATYMFGLYSSDIK-TSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIP 119 (492)
Q Consensus 42 ~Gt~Y~fS~ys~~L~-~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~ 119 (492)
....|.+..|.|+.- +.+|++..+...+.....++..+ .+..|++.||+|+|.++.++.+...++-......... .
T Consensus 263 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~ 340 (490)
T PRK10642 263 NVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS--N 340 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC--C
Confidence 345677778888854 66899987766655555666654 5678999999999998888876443332222211111 1
Q ss_pred CchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHH
Q 039263 120 KPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQL 177 (492)
Q Consensus 120 ~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i 177 (492)
+ .+.+....++.+.+.+...........+.||. .||++.|+.-...-+++.+...+
T Consensus 341 ~--~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i 397 (490)
T PRK10642 341 V--IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTL 397 (490)
T ss_pred C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHH
Confidence 1 22222222222222222222222333468986 59998887544333344443333
No 109
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.96 E-value=4.9e-05 Score=77.74 Aligned_cols=119 Identities=11% Similarity=0.044 Sum_probs=74.6
Q ss_pred HHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 039263 53 SDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYIC 131 (492)
Q Consensus 53 ~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~ 131 (492)
..+++.+|.++.+.+.+........ ...+..|++.||+|+|.+..++.+...+++..+.. . + +.|.+.....
T Consensus 224 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~---~--~~~~~~~~~~ 296 (375)
T TIGR00899 224 LLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA--D---N--SLWALLMLQL 296 (375)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH--H---H--HHHHHHHHHH
Confidence 3456788999988877533222222 23578899999999999888777665555543321 1 1 2344443444
Q ss_pred HhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHH
Q 039263 132 IGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLY 178 (492)
Q Consensus 132 l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~ 178 (492)
+.|.+.+...........+.+|++||.+.|+......++..+-..+.
T Consensus 297 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 343 (375)
T TIGR00899 297 LNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVG 343 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555566788899999999987655555554444333
No 110
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.95 E-value=4.2e-05 Score=79.58 Aligned_cols=144 Identities=17% Similarity=0.076 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHH
Q 039263 29 WFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGY 107 (492)
Q Consensus 29 w~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy 107 (492)
|..+++..+.+......|. |.++.-+++|+++.+.+.+.....+... .++..|++.||+|+|..+.+|.++..+++
T Consensus 208 ~~~l~~~~l~~~~~~~~~~---~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~ 284 (382)
T TIGR00902 208 LRFLAAVCLIQGAHAAYYG---FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRW 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 4455555555555444444 4466556699999999886444444444 47889999999999999999999999998
Q ss_pred HHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehh-HhhhhhHHHHHHHHHHHcC
Q 039263 108 FMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLK-GFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 108 ~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~-a~~GLsa~i~s~i~~~~f~ 183 (492)
..+.. .+ +.|.+.....+-|.+.+....+++.-..+. |+ +|++..|+.. ...|+|..+-+.+.....+
T Consensus 285 ~~~~~-----~~--~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 285 AIIGA-----IE--AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHh-----Hh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65431 22 246566667777777788888877777777 64 7888888864 4667777776665555444
No 111
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.94 E-value=9.2e-06 Score=85.12 Aligned_cols=113 Identities=7% Similarity=0.141 Sum_probs=89.6
Q ss_pred EEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-Cchh
Q 039263 358 TAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSL 436 (492)
Q Consensus 358 ~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l 436 (492)
+....+.++.+++|.++.+.+..++...+...++++.+|.++||++|| ..+....++..++.++....+ ...+
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr------~~~~~~~~~~~~~~~~~~~~~~~~~l 111 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR------YVVILFAVLLTLSCLLVSFANSFSLL 111 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH------HHHHHHHHHHHHHHHHHHHHChHHHH
Confidence 334457788889999888889999999999999999999999999654 355556666666665544333 4467
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccccee
Q 039263 437 YAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAV 476 (492)
Q Consensus 437 ~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~l 476 (492)
++.-.+.|++.|..+...++++.|+|..|+.++..++...
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~ 151 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFG 151 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHH
Confidence 7788899999999999999999999998888887777543
No 112
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.93 E-value=5.8e-05 Score=79.05 Aligned_cols=137 Identities=11% Similarity=0.057 Sum_probs=78.6
Q ss_pred cccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHH-HHHHHHHHHHHHHHHHHhcCCCCc
Q 039263 44 ATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLA-IGSIMNFFGYFMIWLAVTGRIPKP 121 (492)
Q Consensus 44 t~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~-iG~vl~~~Gy~~~~~~~~g~i~~~ 121 (492)
..|.+..|.|...+++|++..+...+.....++.. ..+..|++.||+|+|.... .+.+...++...++.... ... .
T Consensus 237 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~-~~~-~ 314 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ-HFG-H 314 (402)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH-ccC-C
Confidence 35677778888888899999887765443444444 3678899999999887653 333333333222222111 111 1
Q ss_pred hhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 122 QVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 122 ~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
+.+.+..+..+.|.+.+.. ........+.+|++||++.|+.-....+++.+-..+...+.+
T Consensus 315 ~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 375 (402)
T TIGR00897 315 SFAVALIIAIALGIFLAGY-VPLAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIG 375 (402)
T ss_pred cHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2333333333334433332 222222345679999999999877777776665555544443
No 113
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.92 E-value=4.7e-05 Score=79.32 Aligned_cols=132 Identities=14% Similarity=0.096 Sum_probs=88.5
Q ss_pred ccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
.|....|.|++.++.|++..+.+.+.....++.. ..+..|++.||+|+|....++.+...++...+. ..++ .
T Consensus 236 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-----~~~~--~ 308 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALA-----AAPS--F 308 (406)
T ss_pred HHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-----hcCc--H
Confidence 4555566788888899999988887555555554 478999999999999988766555555543222 1122 3
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
+.+....++.|.+.+..++.......+.+|+ +||++.|+.....++++++-..+...+.+
T Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 309 AGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 3343344444544444455556667788885 69999999988888887776666665554
No 114
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.91 E-value=6.3e-05 Score=79.61 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=67.6
Q ss_pred cccccccccHH-HHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 039263 44 ATYMFGLYSSD-IKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKP 121 (492)
Q Consensus 44 t~Y~fS~ys~~-L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~ 121 (492)
..|.+..|-|+ +++++|+++.+.+.. +.....+...+++.|++.||+|+|.+..+++++..+....+..... ..++
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~- 335 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQ-NVSS- 335 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-cCCc-
Confidence 35666677666 566789998887775 3334444445778899999999998887776654333222221111 1111
Q ss_pred hhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHh
Q 039263 122 QVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGF 166 (492)
Q Consensus 122 ~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~ 166 (492)
+.+.+. ...++....+......-....++||. +||++.|+.-+.
T Consensus 336 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 336 PYAAFG-LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 122121 11222222222222222345689986 699999997643
No 115
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.91 E-value=0.00066 Score=73.22 Aligned_cols=133 Identities=13% Similarity=0.085 Sum_probs=80.5
Q ss_pred HhhCccccccccc---HHHHHhhCCChhhhhHHHHHh-hhhccccccceeeec----cCCcHHHHHHH-HHHHHHHHHHH
Q 039263 40 AVAGATYMFGLYS---SDIKTSLGYDQSTLNLLSFSK-DVGGNVGVLSGLINE----ITPPWVVLAIG-SIMNFFGYFMI 110 (492)
Q Consensus 40 l~~Gt~Y~fS~ys---~~L~~~~~~sq~~l~~is~~~-~vg~~~~~~~G~~~D----~~Gpr~~~~iG-~vl~~~Gy~~~ 110 (492)
...|..+.|++.. ++..+.+|.+..+..++..+. ..+....+..|.+.| |+|+|.+.+++ .+...+++.++
T Consensus 12 ~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll 91 (477)
T TIGR01301 12 VAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI 91 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 3455667776644 446678999999998874444 444456899999999 59999988764 55555565544
Q ss_pred HHHHhcCCC---------Cchh---HHHHHHHHHhhccccchhhhhhhhhhhhcCCC-C--CceeeehhHhhhhhHHHH
Q 039263 111 WLAVTGRIP---------KPQV---WQMCLYICIGANSQSFANTGALVTCVKNFPES-R--GSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 111 ~~~~~g~i~---------~~~~---~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-R--G~a~Gi~~a~~GLsa~i~ 174 (492)
... ..+. .... +.......+...+........-.-....+|++ | +.+.++...+.++|+.+-
T Consensus 92 ~~~--~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg 168 (477)
T TIGR01301 92 GFA--ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLG 168 (477)
T ss_pred HhC--chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 321 1110 0011 11111122334455555555556677888854 3 678888777777765554
No 116
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.91 E-value=3.8e-05 Score=80.40 Aligned_cols=138 Identities=14% Similarity=0.091 Sum_probs=86.5
Q ss_pred ccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC---
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPK--- 120 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~--- 120 (492)
.+....|.+.+.+++|++..+.........++. ...+++|++.||+|+|....++.++..++..++..........
T Consensus 300 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (481)
T TIGR00879 300 INAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSK 379 (481)
T ss_pred CeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCccc
Confidence 455667888888999999876666544444444 3477889999999999999888887777765554221111111
Q ss_pred --chhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 121 --PQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 121 --~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
...+........++.+.++. ........+.+|+ +||++.|+......+++++...+...+.+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 380 SSGNVAIVFILLFIAFFAMGWG-PVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred chhHHHHHHHHHHHHHHHcccc-CeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11121222222222232221 2222334678885 69999999888888888888777666554
No 117
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.85 E-value=0.00011 Score=76.69 Aligned_cols=140 Identities=14% Similarity=0.016 Sum_probs=86.3
Q ss_pred ccccccccHHH-HHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCch
Q 039263 45 TYMFGLYSSDI-KTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQ 122 (492)
Q Consensus 45 ~Y~fS~ys~~L-~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~ 122 (492)
.+.|..+.|.+ ++.+|++..+.........++... .+..|++.||+++|....+|.++..+|..++....... . .+
T Consensus 231 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~-~~ 308 (406)
T PRK15402 231 LLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS-S-HA 308 (406)
T ss_pred HHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc-c-cc
Confidence 45666666654 677899988877754433444433 67889999999999999889888877876554432111 1 12
Q ss_pred hHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcCCCh
Q 039263 123 VWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYGDNS 186 (492)
Q Consensus 123 ~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~ 186 (492)
.+.+....++.|.|.+..++.........-|++||.+.++......++..+=..+....++...
T Consensus 309 ~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 309 YLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 2323334444555555544433333334457899999999766555555555555555555433
No 118
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.84 E-value=9.2e-05 Score=75.60 Aligned_cols=120 Identities=14% Similarity=0.033 Sum_probs=75.6
Q ss_pred hhCcccccccccHHHH-HhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHH-HHHHHHHHHhcC
Q 039263 41 VAGATYMFGLYSSDIK-TSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFF-GYFMIWLAVTGR 117 (492)
Q Consensus 41 ~~Gt~Y~fS~ys~~L~-~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~-Gy~~~~~~~~g~ 117 (492)
+....+.+..|-+..- +++|+++.+.+.+.....++.. ..++.|++.||+|+|....+++.+..+ ++.... .....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~~~ 309 (394)
T TIGR00883 231 TTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLM-ALLDS 309 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH-HHhcC
Confidence 3344566666666654 7789999888776444444444 467899999999999987755554433 322221 22211
Q ss_pred CCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehh
Q 039263 118 IPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLK 164 (492)
Q Consensus 118 i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~ 164 (492)
.+.+.+....++.+.+.+..+........+.+|+ +||++.|+..
T Consensus 310 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 354 (394)
T TIGR00883 310 ---GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAY 354 (394)
T ss_pred ---CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehh
Confidence 1234444444555555666666667777889996 6999999853
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.82 E-value=8.8e-05 Score=78.02 Aligned_cols=155 Identities=10% Similarity=0.038 Sum_probs=88.7
Q ss_pred cccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHH
Q 039263 48 FGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQM 126 (492)
Q Consensus 48 fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l 126 (492)
++.|..+..+..+.+..+.+.+.....+.. ...++.|++.||+|+|....++.++..+++.++.. .++ .|.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~-----~~~--~~~~ 318 (420)
T PRK09528 246 FPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF-----ATG--PLEV 318 (420)
T ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh-----ccc--HHHH
Confidence 455554444444677677777533333333 34779999999999999998888888887765442 222 3444
Q ss_pred HHHHHHhhccccchhhhhhhhhhhhcCCC-CCceeeeh-hHhhhhhHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHh
Q 039263 127 CLYICIGANSQSFANTGALVTCVKNFPES-RGSVLGLL-KGFVGLSGAILTQLYHAFYGD-NSKALILLIAWLPAAISFV 203 (492)
Q Consensus 127 ~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~-~a~~GLsa~i~s~i~~~~f~~-~~~~fllfla~~~~~v~~~ 203 (492)
.....+.+.+.+...........+++|++ |+++.+.. ....++|+.+-..+.....+. +...-++.+++...+..++
T Consensus 319 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~ 398 (420)
T PRK09528 319 SILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLI 398 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHH
Confidence 44455556555555555555567788864 67776653 334556665555554443331 2333344444444444444
Q ss_pred hhhccc
Q 039263 204 FLRTFR 209 (492)
Q Consensus 204 ~~~~i~ 209 (492)
.....|
T Consensus 399 ~~~~~~ 404 (420)
T PRK09528 399 SVFTLS 404 (420)
T ss_pred HHHHhc
Confidence 433443
No 120
>PRK03545 putative arabinose transporter; Provisional
Probab=97.82 E-value=0.00011 Score=76.29 Aligned_cols=115 Identities=12% Similarity=0.159 Sum_probs=68.2
Q ss_pred cHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHH
Q 039263 52 SSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYI 130 (492)
Q Consensus 52 s~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~ 130 (492)
.+-+++++|+|+.+...+.....++.. ..++.|++.||+|+|.. .++..+...+...... .. + +.+.++...
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~-~~---~--~~~~~~~~~ 301 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLP-AA---N--SEWHLSVLS 301 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHH-Hh---c--hHHHHHHHH
Confidence 445677789999888776444444444 36788999999997764 4555555555433221 11 1 234444444
Q ss_pred HHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHH
Q 039263 131 CIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAI 173 (492)
Q Consensus 131 ~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i 173 (492)
.+.|.+.............+..|++||.+.|+..+..-+|..+
T Consensus 302 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 344 (390)
T PRK03545 302 IFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGA 344 (390)
T ss_pred HHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 4444444433333344455678999999888776554444433
No 121
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.81 E-value=6.6e-05 Score=80.35 Aligned_cols=115 Identities=15% Similarity=0.149 Sum_probs=83.5
Q ss_pred hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHH-----hc-CCchh
Q 039263 363 LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIA-----YG-IPNSL 436 (492)
Q Consensus 363 ~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~-----~~-~~~~l 436 (492)
..++.++++.++.+.+...+.+.+...++.+.+|.++||+++|+ .+.+..++..+..+++. .. ....+
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 125 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQ------FLPFLLILSAICMLGFGASLGSGSVSLGLM 125 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccc------hHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 45677788988888888899999999999999999999997654 33333333333222211 11 22345
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHH
Q 039263 437 YAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAY 483 (492)
Q Consensus 437 ~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~ 483 (492)
.+.-.+.|++.|..+.....+++|+|..++.|+..|+...+..+|..
T Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~ 172 (467)
T PRK09556 126 IALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGA 172 (467)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhh
Confidence 66667789999999999999999999999999988887655555443
No 122
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.79 E-value=3.4e-05 Score=82.15 Aligned_cols=126 Identities=17% Similarity=0.198 Sum_probs=90.1
Q ss_pred HHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHh
Q 039263 55 IKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIG 133 (492)
Q Consensus 55 L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~ 133 (492)
+++.+|++..|.+.+.....++.. ..++.|++.||+|+|....+|.++..+|+.++..... ++.+.+.+.....+.
T Consensus 282 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 358 (485)
T TIGR00711 282 LQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT---PDTPFLAIALPQFIR 358 (485)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC---CCCCHHHHHHHHHHH
Confidence 455689999998887555555554 4788999999999999999999888888765542221 122344444455667
Q ss_pred hccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 134 ANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 134 g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
|.|.+..+........+.+| ++||.+.|+......+|+++-..+...++.
T Consensus 359 g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 359 GFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777666666778888 579999999877777777777666555543
No 123
>PRK11043 putative transporter; Provisional
Probab=97.79 E-value=0.00022 Score=74.30 Aligned_cols=141 Identities=16% Similarity=0.144 Sum_probs=87.3
Q ss_pred hhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 039263 41 VAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIP 119 (492)
Q Consensus 41 ~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~ 119 (492)
+.+..+.|..+.|.+.+++|+++.+.+.......++... ++.++++.||+|+|.....+.+...++...+++..... .
T Consensus 215 ~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 293 (401)
T PRK11043 215 CSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS-H 293 (401)
T ss_pred HHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc-c
Confidence 334456666777888888999999888754333333333 56778999999988876666555555544433322111 1
Q ss_pred CchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 120 KPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 120 ~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
...+.......+.+.+.+..+........+.+|++||.+.|+..+.....+.....+...+.+
T Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 294 -PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 122333333344455666666766667778899999999999876644455555555544443
No 124
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.78 E-value=9.2e-05 Score=77.73 Aligned_cols=148 Identities=13% Similarity=0.133 Sum_probs=86.9
Q ss_pred cccHHHHHh-hCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHH
Q 039263 50 LYSSDIKTS-LGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMC 127 (492)
Q Consensus 50 ~ys~~L~~~-~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~ 127 (492)
.+-|.+.++ +|++..+.+.+.....++... +++.|++.||.+++..+.++.++..+++.++.. .+ +.+...
T Consensus 244 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~--~~~~~~ 316 (417)
T PRK10489 244 VLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL-----MP--MWILAV 316 (417)
T ss_pred HhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc-----cc--hHHHHH
Confidence 344555444 999988888775555555544 678899999988887777787777777654321 12 234344
Q ss_pred HHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHhh
Q 039263 128 LYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGD-NSKALILLIAWLPAAISFVF 204 (492)
Q Consensus 128 ~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~-~~~~fllfla~~~~~v~~~~ 204 (492)
...++.|.+.+...........+.+|+ +||++.|+.....-+|..+=..+...+.+. +....++..+....+++.+.
T Consensus 317 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 317 LCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 444455565555555445566788996 599999987654444444443333333321 33333444444444444433
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.78 E-value=9.2e-05 Score=75.12 Aligned_cols=127 Identities=9% Similarity=-0.051 Sum_probs=80.4
Q ss_pred ccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHH
Q 039263 51 YSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLY 129 (492)
Q Consensus 51 ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~ 129 (492)
+-++..+++|++..+...+.....++..+ .+..|++.||+|+|....++.++..+++.++... .. ...+.+...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~ 301 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFI--PM---LNDVLFLAT 301 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHc--cc---chhHHHHHH
Confidence 44555667889888877765555555544 7889999999999999888888888887654322 11 111222222
Q ss_pred HHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 130 ICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 130 ~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
..+.+.+.+..++.......+.+|+ +||++.|+......+++.+-..+.....
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333343333333445678874 6999999988777777766655544433
No 126
>PRK10504 putative transporter; Provisional
Probab=97.76 E-value=2.9e-05 Score=82.82 Aligned_cols=132 Identities=15% Similarity=0.109 Sum_probs=98.5
Q ss_pred chhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHH
Q 039263 339 SIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVL 418 (492)
Q Consensus 339 t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~ 418 (492)
.+.+|+++..+++......++......+.+++|.++.+.+..++...+...++.+.+|.++||++||+ .+....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~------~~~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN------IFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH------HHHHHH
Confidence 34689888888776555445556688888899988777777788889999999999999999997653 333334
Q ss_pred HHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccccee
Q 039263 419 LFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAV 476 (492)
Q Consensus 419 ~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~l 476 (492)
++..++.++..... ...+++.-++.|++.|..+......+.|.+..++.++.+++...
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTL 141 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 44444444433332 33566777788999999999999999999998888888777543
No 127
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.73 E-value=0.0018 Score=66.69 Aligned_cols=163 Identities=15% Similarity=0.146 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHH-HHH
Q 039263 30 FMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNF-FGY 107 (492)
Q Consensus 30 ~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~-~Gy 107 (492)
+..+++.--+--++-.-.=|..++.+.+..|.+..|.++++...+.|..+ ....|+..|++|+|.-..+-.+..+ .||
T Consensus 79 l~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~ 158 (528)
T KOG0253|consen 79 LFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGV 158 (528)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHH
Confidence 44555554444555555557889999999999999999999999999987 7899999999999985543333221 122
Q ss_pred HHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCCh
Q 039263 108 FMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNS 186 (492)
Q Consensus 108 ~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~ 186 (492)
.+|.- +.+..+|++-++-|.|.|. +..-..-=..--|. +|++-+=.. ++...|..+-..+.-...++-.
T Consensus 159 ------is~~s--pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 159 ------ISGAS--PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred ------hhcCC--CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 24443 3344467777777777766 33333322333375 788766555 7776666655555555445445
Q ss_pred hHHHHHHHHHHHHHHH
Q 039263 187 KALILLIAWLPAAISF 202 (492)
Q Consensus 187 ~~fllfla~~~~~v~~ 202 (492)
=+|++|+...|....+
T Consensus 229 wr~~l~~~~~pl~~~a 244 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAA 244 (528)
T ss_pred HHHHHHHHHhHHHHHH
Confidence 5788888777765433
No 128
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.73 E-value=5.6e-05 Score=77.18 Aligned_cols=128 Identities=16% Similarity=0.169 Sum_probs=94.1
Q ss_pred hHHHHHHHHHhhccceeEEecchhH-HHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 341 DMLIIFIATTCGVGGTLTAIDNLGQ-IGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 341 ~FWllf~~~~~~~g~Gl~~i~n~~~-I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
.||..++.+++......++..-..+ +.++++.++.+.+...++..+...++.+.+|.++||++|| ..+.+..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~ 75 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR------YTTTLSLL 75 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch------HHHHHHHH
Confidence 5788888888766655554444553 7788999988888999999999999999999999999654 34555666
Q ss_pred HHHHHHHHHHhcC--CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccce
Q 039263 420 FSCVGHPFIAYGI--PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGA 475 (492)
Q Consensus 420 l~~~~~ll~~~~~--~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~ 475 (492)
++.++.++..... ...+++...+.|++. +.+....++++|++..|+-++..++..
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~ 132 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAA 132 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHH
Confidence 6666665554433 234566777778884 456677889999998888777666643
No 129
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.73 E-value=7.2e-05 Score=79.15 Aligned_cols=147 Identities=13% Similarity=0.065 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhhCcccccccccHHHHHhhCCCh--------hhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHH
Q 039263 30 FMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQ--------STLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGS 100 (492)
Q Consensus 30 ~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq--------~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~ 100 (492)
..++...+++......| .|.+...++.|+++ ++...+.....+.. ...++.|++.||+|+|.++.++.
T Consensus 212 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~ 288 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITN---IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSL 288 (418)
T ss_pred eHHHHHHHHHhHHHHHH---HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34455555444443333 44355445566654 33344433333333 34688999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehh-HhhhhhHHHHHHHH
Q 039263 101 IMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLK-GFVGLSGAILTQLY 178 (492)
Q Consensus 101 vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~-a~~GLsa~i~s~i~ 178 (492)
++..+++.++... .... ...+.+....++.|.+.+..+.+......+++|+ +||++.|+.. ...++|+.+-..+.
T Consensus 289 ~~~~v~~~l~~~~-~~~~--~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~ 365 (418)
T TIGR00889 289 VAWALRFGFFAYG-DPEY--FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS 365 (418)
T ss_pred HHHHHHHHHHHHc-Ccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9888876544321 1111 1123344445666666666666667777899995 6999999985 55666665554444
Q ss_pred HHHc
Q 039263 179 HAFY 182 (492)
Q Consensus 179 ~~~f 182 (492)
...+
T Consensus 366 G~l~ 369 (418)
T TIGR00889 366 GVMV 369 (418)
T ss_pred HHHH
Confidence 4333
No 130
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.72 E-value=5.3e-05 Score=78.64 Aligned_cols=143 Identities=10% Similarity=0.044 Sum_probs=99.0
Q ss_pred cchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHH
Q 039263 338 FSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFV 417 (492)
Q Consensus 338 ~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~ 417 (492)
.++++|+++...++....--.+..-..++.+++|.++.+.+...+...+++.++++.+|.++||++||+ .+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~------~~~~~ 77 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR------SYYLA 77 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH------HHHHH
Confidence 466789888877664333223334567777788988888889999999999999999999999997764 34444
Q ss_pred HHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc----eehhhHHHHHHh
Q 039263 418 LLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG----AVASPVGAYILN 486 (492)
Q Consensus 418 ~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~----~la~~~gs~l~~ 486 (492)
.++..++.+.....+ ...+.+.-++.|++.|..+....+.+.|..-.++-++..+.. .+++.+|+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 151 (381)
T PRK03633 78 SLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVS 151 (381)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444555544433332 335567777889999988888777777777666667766663 445555555543
No 131
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.71 E-value=0.00017 Score=74.90 Aligned_cols=150 Identities=11% Similarity=0.091 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHH-HHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHH
Q 039263 29 WFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFG 106 (492)
Q Consensus 29 w~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~G 106 (492)
|..++...+.+...+..|.|. ++.+++ .|++.++++.+ +..+.+...+ .+.+|++.||+|+|..+.++.++...+
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~--~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 211 WSLLALALLSAMTAVSGFGLS--KLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--hHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 556666666676677777753 455554 79999999886 4433445544 578999999999999888777655343
Q ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC--CCCCceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 107 YFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP--ESRGSVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 107 y~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP--~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
. +.+............+.+.....+.+...+....+.....++..+ ++||+..++..+..++|..+-..+.....
T Consensus 288 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 288 A-LLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLT 364 (390)
T ss_pred H-HHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 233332222111112223333334444445544444555566664 46899999988888888777665544443
No 132
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.69 E-value=0.00017 Score=62.00 Aligned_cols=97 Identities=20% Similarity=0.226 Sum_probs=72.2
Q ss_pred ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCC
Q 039263 79 VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRG 157 (492)
Q Consensus 79 ~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG 157 (492)
.+++.|++.||+|+|....++.++..++....... + +.|.+.....+.|.+.+..++.......+.+|+ +|+
T Consensus 14 ~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (141)
T TIGR00880 14 YSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-----S--NITVLIIARFLQGFGAAFALVAGAALIADIYPPEERG 86 (141)
T ss_pred HHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-----c--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhh
Confidence 36788999999999999999988888887654422 2 245555566677777777777777778899985 699
Q ss_pred ceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 158 SVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 158 ~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
++.|+......++..+-..+.....
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 9999988777777766665555444
No 133
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.69 E-value=0.00011 Score=79.55 Aligned_cols=132 Identities=11% Similarity=0.131 Sum_probs=92.0
Q ss_pred ccccccc-HHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 46 YMFGLYS-SDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 46 Y~fS~ys-~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
|.+..|- ..+++.+|+|..|.+.......++.. .+++.|++.||+|+|..+.+|.++..+|+.++... ... .+.
T Consensus 276 ~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~--~~~--~~~ 351 (495)
T PRK14995 276 VGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT--DFS--TQQ 351 (495)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh--cCC--Cch
Confidence 3443343 45677799999998886544445444 47899999999999999988998888887655432 221 224
Q ss_pred HHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHH
Q 039263 124 WQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAF 181 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~ 181 (492)
|....+.++.|.|.+..........++..|+ +||.++++......+|+++-..+...+
T Consensus 352 ~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 352 WQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666778888888887777778888885 689999987666555555544444443
No 134
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.69 E-value=0.0003 Score=74.97 Aligned_cols=129 Identities=17% Similarity=0.187 Sum_probs=81.4
Q ss_pred cccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHH
Q 039263 48 FGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQM 126 (492)
Q Consensus 48 fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l 126 (492)
...|.|.+.++.|+++.+.........+.. ...+.+|++.||+|+|.+.++|.++..+++.++......... ..+..
T Consensus 290 ~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~--~~~~~ 367 (479)
T PRK10077 290 VLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP--GIVAL 367 (479)
T ss_pred HHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcc--cHHHH
Confidence 345678888889998765544433333332 336789999999999999999999999988777654332221 12221
Q ss_pred -HHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHH
Q 039263 127 -CLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYH 179 (492)
Q Consensus 127 -~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~ 179 (492)
+......+.+.++ .+.......+.||+ +||.+.|+..+...+++.+.+.++-
T Consensus 368 ~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 368 LSMLFYVAAFAMSW-GPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred HHHHHHHHHHhccc-cchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 2212222222222 12334556778985 7999999988777777776655553
No 135
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.67 E-value=0.00033 Score=71.97 Aligned_cols=145 Identities=11% Similarity=0.114 Sum_probs=81.4
Q ss_pred ccccccccH-HHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHH-HHHHHHHHHhcCCCCc
Q 039263 45 TYMFGLYSS-DIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFF-GYFMIWLAVTGRIPKP 121 (492)
Q Consensus 45 ~Y~fS~ys~-~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~-Gy~~~~~~~~g~i~~~ 121 (492)
.+.+-.+.+ .+++++|+++.+.+.+.....++. ...++.|++.||+|+|.+..++.++..+ +..+... +..+ .
T Consensus 210 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~---~~~~-~ 285 (377)
T PRK11102 210 MFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVS---ALLD-L 285 (377)
T ss_pred HHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH---HHHh-h
Confidence 444444444 356778999999888644444444 3478999999999999988877765433 2222211 1111 1
Q ss_pred hhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehh-HhhhhhHHHHHHHHHHHcCCChhHHHHHHH
Q 039263 122 QVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLK-GFVGLSGAILTQLYHAFYGDNSKALILLIA 194 (492)
Q Consensus 122 ~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~-a~~GLsa~i~s~i~~~~f~~~~~~fllfla 194 (492)
+.|.......+.+.+.+......+....+.+|++||.+.++.. ..+++++.+-.. ......++...++...+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~-~~~~~~~~~~~~~~~~~ 358 (377)
T PRK11102 286 GFWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGAL-LSLAPFTSAWPMVWSMA 358 (377)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHH-HHhccCCChHHHHHHHH
Confidence 2333322222222233344444455556678999999999864 446666554443 33333344444444444
No 136
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.67 E-value=6.5e-05 Score=78.07 Aligned_cols=132 Identities=13% Similarity=0.127 Sum_probs=95.5
Q ss_pred hhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 340 IDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 340 ~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
+++|.+-...++..-...++..-...+.+++|.+..+.+..++...+++.+|++.+|.+.||++|| ..+.+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK------HILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH------HHHHHHHH
Confidence 456655554443333323444456677788998888888999999999999999999999999654 34555555
Q ss_pred HHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceeh
Q 039263 420 FSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVA 477 (492)
Q Consensus 420 l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la 477 (492)
+..++.++....+ ...+++.-.+.|++.|......+.++.|++..++.+...+....+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSG 135 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHH
Confidence 5666655544433 445677788899999999999999999999988877766665433
No 137
>PRK15075 citrate-proton symporter; Provisional
Probab=97.67 E-value=0.00029 Score=74.65 Aligned_cols=118 Identities=15% Similarity=0.153 Sum_probs=66.8
Q ss_pred cccccccccHHH-HHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHH-HHHHHHHHHhcCCCC
Q 039263 44 ATYMFGLYSSDI-KTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFF-GYFMIWLAVTGRIPK 120 (492)
Q Consensus 44 t~Y~fS~ys~~L-~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~-Gy~~~~~~~~g~i~~ 120 (492)
..|....|.|+. ++.+|+++.|..++.....++..+ .+.+|++.||+|+|.+..++.++..+ ++...... .. .+
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~-~~-~~- 329 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWL-VA-AP- 329 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH-Hc-CC-
Confidence 355566677775 455899988877665555555443 67889999999999988776554332 32211111 11 11
Q ss_pred chhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhH
Q 039263 121 PQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKG 165 (492)
Q Consensus 121 ~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a 165 (492)
+.+.+.....+.+.+.+...........+.+|+ +||.+.|+..+
T Consensus 330 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~ 374 (434)
T PRK15075 330 -SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYS 374 (434)
T ss_pred -chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHH
Confidence 122121111122222333333334456678886 69999998644
No 138
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.66 E-value=0.0024 Score=67.41 Aligned_cols=135 Identities=21% Similarity=0.199 Sum_probs=78.0
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhH-HHhhcC-CCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCC
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQ-IGSSLG-YPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIP 409 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~-I~~slg-~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~ 409 (492)
+.++++|+|++...++..++. +...-..|+-.. .-+++| .+..... .+.+ .+.+.=+..=.+++|+.||++..
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~-~~~~~~~~~f~~~yl~~~gg~~~~~~g---~~~~-l~~~aEi~~f~~~~~~~~r~g~~ 273 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLI-GISHAAYYTFFSIYLQELGGYSGSTIG---ILWA-LGVVAEIPFFFFSGRFLKRFGIK 273 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcccchhhHHH---HHHH-HHHHHHHHHHHHHHHHHHhcCHH
Confidence 447899999998766655443 333333444444 355666 3322222 2222 23345667777889999988653
Q ss_pred chHHHHHHHHHHHHHHHHHHhc-CCchhHHHH-----HHHHhhhcchhhhHHHHHHHhhcCCCccccccc
Q 039263 410 RPLLFTFVLLFSCVGHPFIAYG-IPNSLYAAS-----VIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 410 R~~~l~i~~~l~~~~~ll~~~~-~~~~l~~~~-----~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
+.+.++.+..++=..+++.. ++....... .+=|++||..+......+.+..-.+.-++--++
T Consensus 274 --~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l 341 (400)
T PF03825_consen 274 --WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGL 341 (400)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHH
Confidence 33444444444433344443 333322222 235999999999999999999975554544443
No 139
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.65 E-value=0.00023 Score=73.94 Aligned_cols=126 Identities=13% Similarity=0.086 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHH
Q 039263 29 WFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGY 107 (492)
Q Consensus 29 w~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy 107 (492)
|..++...+.+.+.+..|. |.++.-++.|+++.+.+.+.....++.. ..++.|++.||+|+|..+.++.+...+++
T Consensus 208 ~~~~~~~~l~~~~~~~~~~---~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 208 WRFLLCVSLLQGSHAAYYG---FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHhHhHHH---HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 4455555666655544443 3355556789999888886444444444 46889999999999999988888888776
Q ss_pred HHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehh
Q 039263 108 FMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLK 164 (492)
Q Consensus 108 ~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~ 164 (492)
.+.. ..++ .|.+....++.|.+.+..+.+......+.-|+++|.+.++..
T Consensus 285 ~~~~-----~~~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (382)
T PRK11128 285 GLMG-----STTA--LPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYS 334 (382)
T ss_pred HHHH-----hhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHH
Confidence 5432 1222 454555566667776776676666666766778888888654
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.64 E-value=0.00019 Score=72.94 Aligned_cols=134 Identities=12% Similarity=0.101 Sum_probs=76.2
Q ss_pred ccccccH-HHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHH-HHHHHHHHHHHHHHH--HHHhcCCCCc
Q 039263 47 MFGLYSS-DIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVL-AIGSIMNFFGYFMIW--LAVTGRIPKP 121 (492)
Q Consensus 47 ~fS~ys~-~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~-~iG~vl~~~Gy~~~~--~~~~g~i~~~ 121 (492)
.+..|.+ .+++.+|+++.+.+.+.....++.. ..+..|++.||+++|... ........++..... ....+..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 310 (399)
T TIGR00893 233 FFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN-- 310 (399)
T ss_pred HHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch--
Confidence 3444444 4567789999888887555555554 478899999999988411 111111111111111 01112111
Q ss_pred hhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcC
Q 039263 122 QVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYG 183 (492)
Q Consensus 122 ~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~ 183 (492)
..+.......+++.+.+ .+........+.+|+ +||++.|+......+++.+-..+.....+
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~ 372 (399)
T TIGR00893 311 IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAA 372 (399)
T ss_pred hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhcc
Confidence 12323333334444444 455666667788985 69999999888778877776666555444
No 141
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.63 E-value=0.0024 Score=69.07 Aligned_cols=152 Identities=18% Similarity=0.225 Sum_probs=102.2
Q ss_pred ccHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHh--hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCC
Q 039263 331 YTILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGS--SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKI 408 (492)
Q Consensus 331 ~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~--slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~ 408 (492)
.+++|.-|.++.+.+.+.+++-. -|+..+...+.+.. .+|+++.+.....-+..+....|-+++|++.||++.|.+
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~-dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~- 349 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYS-DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK- 349 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh-
Confidence 46777777888877766665522 33344444444444 488887777777788899999999999999999976521
Q ss_pred CchHHHHHHHHHHHHHHHHHH--------hcCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceeh---
Q 039263 409 PRPLLFTFVLLFSCVGHPFIA--------YGIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVA--- 477 (492)
Q Consensus 409 ~R~~~l~i~~~l~~~~~ll~~--------~~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la--- 477 (492)
|+....+... ..+....+. ......+|+..+++|++.|+..+.--++.+|+==..+-++-||+..+.
T Consensus 350 -~~l~~~l~~~-~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 350 -RTLLISLILW-IIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA 427 (477)
T ss_pred -HHHHHHHHHH-HHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 3332222221 122221111 223447899999999999999999999999988777788888886443
Q ss_pred -hhHHHHHHh
Q 039263 478 -SPVGAYILN 486 (492)
Q Consensus 478 -~~~gs~l~~ 486 (492)
+.+|+.++.
T Consensus 428 ss~lGPll~g 437 (477)
T PF11700_consen 428 SSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHH
Confidence 455555544
No 142
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.62 E-value=0.00077 Score=70.52 Aligned_cols=114 Identities=17% Similarity=0.242 Sum_probs=81.6
Q ss_pred hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhc
Q 039263 369 SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSLYAASVIIGFCFG 448 (492)
Q Consensus 369 slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~liG~~~G 448 (492)
.+|.++.+.-..-...++....|-++.|++.||++.|. ..+....+++.++...+.......+++...++|+..|
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~-----vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G 356 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKP-----VLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLG 356 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCce-----eehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcc
Confidence 46776666655557778889999999999999997552 2222223333333333323345578899999999999
Q ss_pred chhhhHHHHHHHhhcCCCcccccccceeh----hhHHHHHHhh
Q 039263 449 AQWPLLFAIISEIFGLKYYSTLYNFGAVA----SPVGAYILNV 487 (492)
Q Consensus 449 ~~~~~~P~i~se~FG~k~~g~nyg~~~la----~~~gs~l~~~ 487 (492)
+..+.-.+..+++.=.++-++-+|+-.+. +..|+++++.
T Consensus 357 ~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 357 GAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred hHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999986554 4555555544
No 143
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.62 E-value=0.00014 Score=75.01 Aligned_cols=117 Identities=14% Similarity=0.237 Sum_probs=89.3
Q ss_pred chhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc-CCchhHHHH
Q 039263 362 NLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG-IPNSLYAAS 440 (492)
Q Consensus 362 n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~-~~~~l~~~~ 440 (492)
...++.+++|.++.+.+...++..+...++.+.+|.++||++||+ .+.+..++..++.++.... +...+++.-
T Consensus 34 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 107 (405)
T TIGR00891 34 VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRL------PMVTSIVLFSAGTLACGFAPGYITMFIAR 107 (405)
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH------HHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 345666778998888888999999999999999999999997653 4444555555555444333 233567777
Q ss_pred HHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHH
Q 039263 441 VIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYI 484 (492)
Q Consensus 441 ~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l 484 (492)
.+.|++.|..+...++++.|++..++-++..++...+..+|..+
T Consensus 108 ~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~ 151 (405)
T TIGR00891 108 LVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV 151 (405)
T ss_pred HHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999898888888766655555443
No 144
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.61 E-value=6e-05 Score=75.95 Aligned_cols=114 Identities=18% Similarity=0.214 Sum_probs=89.3
Q ss_pred HHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHh-cCCchhHHHHHHH
Q 039263 365 QIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAY-GIPNSLYAASVII 443 (492)
Q Consensus 365 ~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~-~~~~~l~~~~~li 443 (492)
.+.+++|.++.+.+...++..+.+.++.+.+|.++||++|| ..+.+..++..++.++..+ .+...+.+..++.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR------RVLIIGLLLFALGSLLLAFASNFWLLLIARFLL 95 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH------HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe------eeEeehhhhhhhHHHHhhhhhhHHHHhhhcccc
Confidence 56778888888888999999999999999999999999654 3566666666666433333 3333567888888
Q ss_pred HhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHH
Q 039263 444 GFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYI 484 (492)
Q Consensus 444 G~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l 484 (492)
|++.|..+....+++.|++..|+.++..++...+..+|..+
T Consensus 96 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~ 136 (352)
T PF07690_consen 96 GIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSIL 136 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhhccccccchhhhhhhc
Confidence 99999999999999999999989999888876665555543
No 145
>PRK03699 putative transporter; Provisional
Probab=97.59 E-value=8.5e-05 Score=77.52 Aligned_cols=129 Identities=12% Similarity=0.118 Sum_probs=92.2
Q ss_pred hhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 340 IDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 340 ~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
+-+|..++.+++..+.-.+.-....++.++++.+..+.+...+...++..+|++.+|.++||++||+ .+....+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~------~~~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR------QLIFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH------HHHHHHH
Confidence 4466666666654444323333467788888998888888889999999999999999999997664 4444555
Q ss_pred HHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 420 FSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 420 l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
+..++.++....+ ...+++.-.+.|++.|..++...+.+.|.|..|+-+...++.
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~ 136 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFT 136 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHH
Confidence 5555555544433 234556667889999999999999999999777766655443
No 146
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.59 E-value=9.8e-05 Score=77.90 Aligned_cols=114 Identities=12% Similarity=0.001 Sum_probs=84.7
Q ss_pred ceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-C
Q 039263 355 GTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-P 433 (492)
Q Consensus 355 ~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~ 433 (492)
+..++...+.+|.++++.+....+..++++.++.++|.+.+|.++||++||+ .+....++..++.++..... .
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~------~l~~~~~~~~~~~~~~~~a~~~ 104 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRP------VLITGALIFTLACAATLFTTSM 104 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH------HHHHHHHHHHHHHHHHHHcCCH
Confidence 3446666778899999998888888999999999999999999999996543 44444555555555444433 3
Q ss_pred chhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 434 NSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 434 ~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
..++++-++.|++.|........++.|.|..++-++..++.
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAII 145 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 35667777888888766677778899999877776666653
No 147
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.58 E-value=0.00014 Score=76.73 Aligned_cols=130 Identities=20% Similarity=0.201 Sum_probs=98.9
Q ss_pred cchHHHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhHHHHH-hhhhccccccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNLLSFS-KDVGGNVGVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~is~~-~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
...|+.++.-.++++..=. -|+=.-=-+++++.+|++.++..++++. ..+.+..+++.|++.||+-|+.++.+|..+.
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW 108 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW 108 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH
Confidence 4555666666666665544 4555556688999999999999999544 4445567999999999999999888888877
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeee
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGL 162 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi 162 (492)
.+.-+. .++. ..+|++.++=.+.|+|-....+.+-.-...+||+ +|+++-|+
T Consensus 109 ~~Av~~-----~~fs--~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 109 TLAVFA-----SGFS--NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHHHHH-----HHHH--HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 666432 2332 3478888887888999988888888888999995 79988776
No 148
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.58 E-value=0.0001 Score=75.41 Aligned_cols=116 Identities=14% Similarity=0.159 Sum_probs=78.5
Q ss_pred ccHHHHHhhCCChhhhhHH-HHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcC----CCCchhH
Q 039263 51 YSSDIKTSLGYDQSTLNLL-SFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGR----IPKPQVW 124 (492)
Q Consensus 51 ys~~L~~~~~~sq~~l~~i-s~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~----i~~~~~~ 124 (492)
+.+.++ ++|++.++...+ +..+.++.. ..+++|++.||+|+|..+.++.++..+++.++....... +.....|
T Consensus 232 ~~~~l~-~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
T TIGR00901 232 TTLFLL-DMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL 310 (356)
T ss_pred HHHHHH-HcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH
Confidence 334444 489999998875 444444443 367889999999999998889888877766544321111 0101235
Q ss_pred HHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhh
Q 039263 125 QMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFV 167 (492)
Q Consensus 125 ~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~ 167 (492)
.+.....+.+.+.+..+.+...-..+.+|+ +||++-|+..+..
T Consensus 311 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 311 MLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 455455666777788888888888999985 6898888765544
No 149
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.57 E-value=7.7e-05 Score=79.09 Aligned_cols=136 Identities=13% Similarity=0.162 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 340 IDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 340 ~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
.-++.+++.+++.......+-....++.+++|.+..+.+..++...+...++++.+|+++||+++|+ .+.+..+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~------~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARY------FMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch------hHHHHHH
Confidence 3444444444443322222333456777788988778888899999999999999999999996543 4455555
Q ss_pred HHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 420 FSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 420 l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
+..++.++..... ...+++.-.+.|++.|..+....+++.|+|..|+.|+-.++...+..+|
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 159 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVG 159 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5555555443332 2234455566799999999999999999999888888777764443333
No 150
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.56 E-value=0.00038 Score=74.48 Aligned_cols=121 Identities=14% Similarity=0.037 Sum_probs=73.6
Q ss_pred ccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeecc--CCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHH
Q 039263 51 YSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEI--TPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMC 127 (492)
Q Consensus 51 ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~--~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~ 127 (492)
|-++..+++|+++.+.+.+.....++.. ..+++|++.|| +++|....++..+...+...+..... ++ .|.+.
T Consensus 263 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~---~~--~~~~~ 337 (455)
T TIGR00892 263 FLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA---GD--YTGLV 337 (455)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh---ch--HHHHH
Confidence 4455555679999998886444444444 46788999997 44554444444333333322222221 22 34444
Q ss_pred HHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHH
Q 039263 128 LYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQ 176 (492)
Q Consensus 128 ~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~ 176 (492)
.+.++.|.+.+..++.......+.+|+ +||++.|+......+++++-..
T Consensus 338 i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~ 387 (455)
T TIGR00892 338 IYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPP 387 (455)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccc
Confidence 555566666666666666667778875 6899999988887776665533
No 151
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.54 E-value=0.00017 Score=77.74 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=94.6
Q ss_pred hHHHHHHHHHhhccceeEEecchhHHHhh---cCCCCCccchhhhHHHhhhhhhhcccchhhHH-HhhhcCCCchHHHHH
Q 039263 341 DMLIIFIATTCGVGGTLTAIDNLGQIGSS---LGYPARSTTTFVSLVSIWNYLGRVVAGFASEI-LLKKYKIPRPLLFTF 416 (492)
Q Consensus 341 ~FWllf~~~~~~~g~Gl~~i~n~~~I~~s---lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~-~~~~~~~~R~~~l~i 416 (492)
.+|.++...++-..+--.+..++..+.++ +|+++.+++..++.+++...++++.+|+++|| ++|| ..+.+
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~------~~l~~ 84 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK------KTMVL 84 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH------HHHHH
Confidence 35666655555322222234455555443 78888888899999999999999999999999 6544 46666
Q ss_pred HHHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCC---ccccccc----ceehhhHHHHH
Q 039263 417 VLLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKY---YSTLYNF----GAVASPVGAYI 484 (492)
Q Consensus 417 ~~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~---~g~nyg~----~~la~~~gs~l 484 (492)
..++..++++++.... ...++++..+.|++.|...+..+++++|.|..++ -+.-+++ ..++..+|..+
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l 160 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLL 160 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHH
Confidence 7777777776665443 2346667778899999999999999999997643 3333443 44455444443
No 152
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.52 E-value=0.00032 Score=75.31 Aligned_cols=122 Identities=12% Similarity=0.139 Sum_probs=79.4
Q ss_pred hhhhccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhc
Q 039263 73 KDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNF 152 (492)
Q Consensus 73 ~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~F 152 (492)
..++....+++|++.||+|+|.++.++.+...+....+++.+.... +.+.+.............|..+.+..+...+.|
T Consensus 296 ~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~-~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f 374 (462)
T PRK15034 296 PFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTG-SGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIF 374 (462)
T ss_pred HHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcccc-ccHHHHHHHHHHHHHHHhcccchHHHHhhHHHH
Confidence 3445556789999999999999999888877776655554443221 233443322122223445666677788888999
Q ss_pred CC----------------------CCCceeeehhHhhhhhHHHHHHHHHHHc---CCChhHHHHHHHH
Q 039263 153 PE----------------------SRGSVLGLLKGFVGLSGAILTQLYHAFY---GDNSKALILLIAW 195 (492)
Q Consensus 153 P~----------------------~RG~a~Gi~~a~~GLsa~i~s~i~~~~f---~~~~~~fllfla~ 195 (492)
|+ +-|.++|++.+.-++|+++...++.... ++-...|..|++.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~ 442 (462)
T PRK15034 375 RQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIF 442 (462)
T ss_pred hhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHH
Confidence 85 4478899999999999999987765554 2333344444444
No 153
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.50 E-value=5.5e-05 Score=76.53 Aligned_cols=134 Identities=11% Similarity=-0.010 Sum_probs=88.6
Q ss_pred HHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHH
Q 039263 342 MLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFS 421 (492)
Q Consensus 342 FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~ 421 (492)
||.++...++.....-+.......+.++.+.++.+.+...++..+...++.+.+|.++||++||+ .+.+..++.
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~------~~~~~~~~~ 74 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKK------VMIGADLIR 74 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH------HHHHHHHHH
Confidence 34444444433222222333344455667777777788889999999999999999999997653 343444443
Q ss_pred HHHHHHHH-hc-----CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 422 CVGHPFIA-YG-----IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 422 ~~~~ll~~-~~-----~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
.++.++.. .. ....+++...+.|++.|.......+++.|++..++.++.+++...+..+|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 140 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLF 140 (365)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHH
Confidence 33333221 11 23356677778899999999999999999999888888777765444443
No 154
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.50 E-value=0.00037 Score=75.45 Aligned_cols=149 Identities=11% Similarity=0.151 Sum_probs=85.9
Q ss_pred chHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHH-HHhhhhccc-cccceeeeccCCcHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLS-FSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 27 ~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is-~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
+.|..++...+.++.....+. ...+-+.+++|+|.++.+.+. ..+.++... ++.+|++.||+|+|..+.+++++..
T Consensus 223 ~~~~~ll~~~l~~~~~~~~~~--~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~ 300 (491)
T PRK11010 223 NAWLILLLIVLYKLGDAFAMS--LTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQG 300 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 346655555544444333333 334556778999999998874 555555544 7889999999998887777777655
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHH
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHA 180 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~ 180 (492)
++...++.... .. .+.+.+.....+.+...+..+.+.....++..|+ .+|+..|+..+..++|+.+.+.+...
T Consensus 301 l~~l~~~~l~~--~~-~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~ 374 (491)
T PRK11010 301 VSNAGYWLLSI--TD-KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGW 374 (491)
T ss_pred HHHHHHHHHHh--cc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443332211 11 1233332222222222233334444455555665 46888888877777877766554433
No 155
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.47 E-value=0.00022 Score=75.24 Aligned_cols=111 Identities=14% Similarity=0.196 Sum_probs=84.9
Q ss_pred HHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHHHH
Q 039263 366 IGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG-IPNSLYAASVIIG 444 (492)
Q Consensus 366 I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~-~~~~l~~~~~liG 444 (492)
+.++++.++.+.+...+++.++.+++.+..|+++||++||+ .+.+..++..++.++.... ....+++.-.+.|
T Consensus 34 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 107 (412)
T TIGR02332 34 MGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR------WIAGIMVLWGIASTATMFATGPESLYLLRILVG 107 (412)
T ss_pred hHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45667888888888999999999999999999999996553 4555555656655554443 3446778888999
Q ss_pred hhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHH
Q 039263 445 FCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGA 482 (492)
Q Consensus 445 ~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs 482 (492)
++.|..+.....+++|+|-.|+-++..++...+..+|.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 145 (412)
T TIGR02332 108 IAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTM 145 (412)
T ss_pred HHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 99999998888999999988888887777655544443
No 156
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.47 E-value=0.00015 Score=73.60 Aligned_cols=113 Identities=17% Similarity=0.210 Sum_probs=85.4
Q ss_pred hHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHH
Q 039263 364 GQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASVI 442 (492)
Q Consensus 364 ~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~l 442 (492)
..+.+++|.++.+.+...++..+...++.+..|.++||++||+ .+.+..++..++.++..... ...+++.-.+
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRV------FLPIGLILCAIVNLFFGFSTSLWVMAALWAL 92 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCee------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4566778988888889999999999999999999999996553 44455555555555543333 3355677778
Q ss_pred HHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHH
Q 039263 443 IGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGA 482 (492)
Q Consensus 443 iG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs 482 (492)
.|++.|..+....++++|++..|+-++-.++...+..+|.
T Consensus 93 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 132 (379)
T TIGR00881 93 NGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGG 132 (379)
T ss_pred HHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHH
Confidence 8999999999999999999998887777776554444443
No 157
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.46 E-value=0.00012 Score=78.39 Aligned_cols=131 Identities=11% Similarity=0.148 Sum_probs=92.0
Q ss_pred hHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHH
Q 039263 341 DMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLF 420 (492)
Q Consensus 341 ~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l 420 (492)
.++.+++.+++..-...+......++.++++.+..+.+..++.+.+...++.+..|.++||++||+ .+.+..++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~ 94 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRL------AMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH------HHHHHHHH
Confidence 455555555443333223333456777788888888888899999999999999999999996543 44455555
Q ss_pred HHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceeh
Q 039263 421 SCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVA 477 (492)
Q Consensus 421 ~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la 477 (492)
..++.++..... ...+++...+.|++.|+.+.....++.|.|-.|+-+.-.++...+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 152 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISG 152 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 555554443332 335677788889999999999999999999877766655554443
No 158
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.43 E-value=0.00011 Score=76.87 Aligned_cols=129 Identities=14% Similarity=0.101 Sum_probs=92.5
Q ss_pred chhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHH
Q 039263 339 SIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVL 418 (492)
Q Consensus 339 t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~ 418 (492)
+++||.+++..++..-..-++...+..+.++++.++...+..++.+.+...+.-+.+|.+.||++||+ .+.+..
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~------vl~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGR------VMFIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCch------hhHHHH
Confidence 56899999887775543334455555667778877666778889999999999999999999997654 333333
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccce
Q 039263 419 LFSCVGHPFIAYGIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGA 475 (492)
Q Consensus 419 ~l~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~ 475 (492)
++..++.++..... ..++.-++.|++.|......-+++.|++..|+.++..+++.
T Consensus 76 ~~~~~~~~~~~~~~--~~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~ 130 (393)
T PRK11195 76 GIKLLGCLLMLFGI--HPLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWME 130 (393)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 33333333222211 12455567899999999999999999999998888877753
No 159
>PRK12382 putative transporter; Provisional
Probab=97.43 E-value=0.00023 Score=73.91 Aligned_cols=134 Identities=13% Similarity=0.018 Sum_probs=88.7
Q ss_pred hcchhHHHHHHHHHhhccceeEEecchh-HHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHH
Q 039263 337 LFSIDMLIIFIATTCGVGGTLTAIDNLG-QIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFT 415 (492)
Q Consensus 337 l~t~~FWllf~~~~~~~g~Gl~~i~n~~-~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~ 415 (492)
..+..+|.+++..++..-.--+...-+. ++.+++|.+..+.+..++...+...++++.+|.++||++||+ .+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~------~l~ 85 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKR------SAL 85 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchH------HHH
Confidence 5566777776655443222112222222 345678998888899999999999999999999999997653 333
Q ss_pred HHHHHHHHHHH---HHHhc------CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccccee
Q 039263 416 FVLLFSCVGHP---FIAYG------IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAV 476 (492)
Q Consensus 416 i~~~l~~~~~l---l~~~~------~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~l 476 (492)
+..+...++.+ +.... ....+++.-.+.|++.+.......+.+.|.+..|+.++-.++..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~ 155 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGM 155 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHH
Confidence 33333222221 11111 112456677788999998888888889999999999887777544
No 160
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.42 E-value=0.003 Score=69.07 Aligned_cols=93 Identities=10% Similarity=0.155 Sum_probs=67.1
Q ss_pred CChhhhhHHHHHhhhhc-cccccceeeeccCCcHHHHHHHHHHHHHHHHHHHH-HHhcCCCCchhHHHHHHHHHhhcccc
Q 039263 61 YDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWL-AVTGRIPKPQVWQMCLYICIGANSQS 138 (492)
Q Consensus 61 ~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~-~~~g~i~~~~~~~l~~~~~l~g~g~~ 138 (492)
=|...++++.++..+-. .+++++|.+.||+.+|.+++..-++..+....+.. ...|.. +.|+++.+.++.|.+..
T Consensus 42 ~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~---~~~~Ll~~~fl~g~~~a 118 (524)
T PF05977_consen 42 GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLL---SPWLLLILTFLLGIGSA 118 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcC---CHHHHHHHHHHHHHHHH
Confidence 34556666666655555 36999999999999999998888777665544433 334443 36888888888898888
Q ss_pred chhhhhhhhhhhhcCCCC
Q 039263 139 FANTGALVTCVKNFPESR 156 (492)
Q Consensus 139 ~~~~a~l~t~~k~FP~~R 156 (492)
+.+.+--...-+--|+++
T Consensus 119 ~~~PA~~A~ip~lV~~~~ 136 (524)
T PF05977_consen 119 FFNPAWQAIIPELVPKED 136 (524)
T ss_pred HHHHHHHHHHHHhccHhh
Confidence 888877777777788654
No 161
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.42 E-value=0.00031 Score=76.23 Aligned_cols=126 Identities=16% Similarity=0.136 Sum_probs=82.9
Q ss_pred HHHhcch-hHHHHHHHHHhhccceeEEecchhHH-HhhcCCCCCccchhhhHHHhhhhhhhcccchhhHH-HhhhcCCCc
Q 039263 334 LQALFSI-DMLIIFIATTCGVGGTLTAIDNLGQI-GSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEI-LLKKYKIPR 410 (492)
Q Consensus 334 ~~~l~t~-~FWllf~~~~~~~g~Gl~~i~n~~~I-~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~-~~~~~~~~R 410 (492)
.+.++++ .+|.++...++...+--.+...+... .+.+|.++.++...++.+........+.+|+++|| ++||
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r----- 88 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK----- 88 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----
Confidence 4556777 49998887766544322222333333 35688877666666666665555556789999999 5654
Q ss_pred hHHHHHHHHHHHHHHHHHHhcC-C-chhHHHHHHHHhhhcchhhhHHHHHHHhhcCC
Q 039263 411 PLLFTFVLLFSCVGHPFIAYGI-P-NSLYAASVIIGFCFGAQWPLLFAIISEIFGLK 465 (492)
Q Consensus 411 ~~~l~i~~~l~~~~~ll~~~~~-~-~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k 465 (492)
..+.+..++..++.+++.... . ..++++-++.|++.|......+++++|.|..+
T Consensus 89 -~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~ 144 (500)
T PRK09584 89 -RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKD 144 (500)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCC
Confidence 355556666666665554432 2 23456667889999999999999999999643
No 162
>PRK09952 shikimate transporter; Provisional
Probab=97.40 E-value=0.0011 Score=70.37 Aligned_cols=131 Identities=11% Similarity=0.091 Sum_probs=72.0
Q ss_pred ccccccccHH-HHHhhCCChhhhhHHHHHhhhh-ccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCch
Q 039263 45 TYMFGLYSSD-IKTSLGYDQSTLNLLSFSKDVG-GNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQ 122 (492)
Q Consensus 45 ~Y~fS~ys~~-L~~~~~~sq~~l~~is~~~~vg-~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~ 122 (492)
.|....|.+. +++.+|++.++...+.....+. ....+..|++.||+|+|.+..++.++..++...+...... . .+
T Consensus 266 ~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~-~~ 342 (438)
T PRK09952 266 MYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA--Q-SI 342 (438)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc--C-Ch
Confidence 3444444444 4667899887655443322222 2335678999999999998887777655544333322221 1 12
Q ss_pred hHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHh-hhhhHHHHHHHH
Q 039263 123 VWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGF-VGLSGAILTQLY 178 (492)
Q Consensus 123 ~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~-~GLsa~i~s~i~ 178 (492)
.+.+....++.+.+.+...........+.||. +|+++.|+.-.. ..+++.+-..+.
T Consensus 343 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~ 400 (438)
T PRK09952 343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIA 400 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33333233444544444444444455688986 688888885432 224444443333
No 163
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.38 E-value=0.00028 Score=74.82 Aligned_cols=111 Identities=14% Similarity=0.159 Sum_probs=78.6
Q ss_pred HHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc----C-CchhHHH
Q 039263 365 QIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG----I-PNSLYAA 439 (492)
Q Consensus 365 ~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~----~-~~~l~~~ 439 (492)
+..++.|.++.+.+...++..+...++.+.+|+++||++||+ .+.+..++..++.+..... . ...+++.
T Consensus 51 p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (438)
T TIGR00712 51 PYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV------FLPAGLILSAAVMLLMGFVPWATSSIAIMFVL 124 (438)
T ss_pred HHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCce------ehHHHHHHHHHHHHHHhccccccchHHHHHHH
Confidence 344456888888888899999999999999999999997653 3333444444444333221 1 1134455
Q ss_pred HHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 440 SVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 440 ~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
-.+.|++.|..+......+.|+|..|+-|+..++...+..+|
T Consensus 125 ~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g 166 (438)
T TIGR00712 125 LFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIG 166 (438)
T ss_pred HHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhH
Confidence 667799999999989999999999888888877755444333
No 164
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.37 E-value=0.00028 Score=73.91 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=88.1
Q ss_pred chhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHH
Q 039263 362 NLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAAS 440 (492)
Q Consensus 362 n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~ 440 (492)
....|.+++|.++.+.+...++..+...+|.+.+|.++||++|| ..+.+..++..++.++..... ...+++.-
T Consensus 40 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 113 (426)
T PRK12307 40 IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK------PLMMWSIVAYSVGTGLSGLASGVIMLTLSR 113 (426)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 34556677888888888888999999999999999999999543 455566666666665443332 33567778
Q ss_pred HHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHH
Q 039263 441 VIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAY 483 (492)
Q Consensus 441 ~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~ 483 (492)
.+.|++.|..+.....++.|.|..|+-++..++...+..+|..
T Consensus 114 ~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 156 (426)
T PRK12307 114 FIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI 156 (426)
T ss_pred HHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH
Confidence 8899999999999999999999988888877775555444443
No 165
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.37 E-value=0.00032 Score=72.91 Aligned_cols=130 Identities=10% Similarity=0.099 Sum_probs=91.8
Q ss_pred HHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHH
Q 039263 343 LIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSC 422 (492)
Q Consensus 343 Wllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~ 422 (492)
|++....+++.....+++....++.++++.++.+.+...+...+...++.+.+|.++||++||+ .+.+...+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~------~~~~~~~~~~ 84 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP------VILVGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH------HHHHHHHHHH
Confidence 3444444444444445556678888999998888888899999999999999999999996543 4444455555
Q ss_pred HHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehh
Q 039263 423 VGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVAS 478 (492)
Q Consensus 423 ~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~ 478 (492)
++.+.....+ ...+++...+.|++.|........+..|.+..++.+...++..++.
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGI 141 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 5554433333 3356677778899998888888888999988777777666654433
No 166
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.0011 Score=66.03 Aligned_cols=126 Identities=18% Similarity=0.218 Sum_probs=79.2
Q ss_pred chhHHHHHHHHHhhccceeEEecchhH--HHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHH
Q 039263 339 SIDMLIIFIATTCGVGGTLTAIDNLGQ--IGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTF 416 (492)
Q Consensus 339 t~~FWllf~~~~~~~g~Gl~~i~n~~~--I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i 416 (492)
.|.||++++++++=-=+=--.| -++| ..+..|+++.++...-|.+-.-++.---+.|.++|+.+++ .|+...
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi-~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n-----~~wv~~ 336 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFI-TLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN-----LWWVAS 336 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHh-hhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce-----ehhHHH
Confidence 4679998887765210000000 1122 2234688877776666666666677778899999999753 245556
Q ss_pred HHHHHHHHHHHHHhcCCchhHHHHHHHHhhhcch----hhhHHHHHHHhhcCCCcccccccce
Q 039263 417 VLLFSCVGHPFIAYGIPNSLYAASVIIGFCFGAQ----WPLLFAIISEIFGLKYYSTLYNFGA 475 (492)
Q Consensus 417 ~~~l~~~~~ll~~~~~~~~l~~~~~liG~~~G~~----~~~~P~i~se~FG~k~~g~nyg~~~ 475 (492)
+.+...++|..+.+. -..=|.+..+.|++|-.+ |...|.++.| +..|+-||+++
T Consensus 337 a~~~tl~~H~~l~Ft-~lsPy~~m~~lGLsysllAcslWP~va~~vpE----~qLGTaygf~q 394 (459)
T KOG4686|consen 337 ACILTLLGHSGLFFT-FLSPYTSMTFLGLSYSLLACSLWPCVASLVPE----EQLGTAYGFIQ 394 (459)
T ss_pred HHHHHHHHhhhHHhh-hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCH----HHhcchHHHHH
Confidence 677788888665442 223477888889998764 5566666664 56777777753
No 167
>PRK10054 putative transporter; Provisional
Probab=97.36 E-value=0.00018 Score=75.38 Aligned_cols=129 Identities=7% Similarity=0.007 Sum_probs=85.5
Q ss_pred hhHHHHHHHHHhhccceeEEecchhH-HHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHH
Q 039263 340 IDMLIIFIATTCGVGGTLTAIDNLGQ-IGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVL 418 (492)
Q Consensus 340 ~~FWllf~~~~~~~g~Gl~~i~n~~~-I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~ 418 (492)
+++|++.+..++....--++..-+.. +.+.+|.++.+.+..+++..+....+++.+|.++||++||+ .+.+..
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~------~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR------YMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch------hHHHHH
Confidence 45888877666643332233333443 34568998888899999999999999999999999997653 333334
Q ss_pred HHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 419 LFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 419 ~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
++..++.+++.+.+ ...+.+...+.|.+++......+..++|.++.++.++.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLN 137 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHH
Confidence 44444444433332 223444455667777877888899999999877776665553
No 168
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.31 E-value=0.00093 Score=69.59 Aligned_cols=136 Identities=10% Similarity=0.061 Sum_probs=74.4
Q ss_pred CCChhhhhHHHHHhhhh-ccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhcccc
Q 039263 60 GYDQSTLNLLSFSKDVG-GNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQS 138 (492)
Q Consensus 60 ~~sq~~l~~is~~~~vg-~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~ 138 (492)
+.+..+.+.+.....+. ....+..|++.||+|+|....+|.++..+++.+... .++ .|.+.....+.|.+..
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~-----~~~--~~~~~~~~~l~g~~~~ 322 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF-----ATT--ALEVVILKMLHAFEVP 322 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh-----cCC--hHHHHHHHHHHHHHHH
Confidence 55555555543333233 334678899999999999999999988888764331 222 3434444555565554
Q ss_pred chhhhhhhhhhhhcCCC-CCceeee-hhHhhhhhHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHH
Q 039263 139 FANTGALVTCVKNFPES-RGSVLGL-LKGFVGLSGAILTQLYHAFYGD-NSKALILLIAWLPAAISF 202 (492)
Q Consensus 139 ~~~~a~l~t~~k~FP~~-RG~a~Gi-~~a~~GLsa~i~s~i~~~~f~~-~~~~fllfla~~~~~v~~ 202 (492)
.....+.....+.+|++ |+++.+. .....++|+.+...+.....+. +.+..+++.++...+.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 44344444445555543 3443333 2344566666665554444432 334444444444443333
No 169
>TIGR00895 2A0115 benzoate transport.
Probab=97.31 E-value=0.00049 Score=70.44 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=83.3
Q ss_pred hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHH
Q 039263 363 LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASV 441 (492)
Q Consensus 363 ~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~ 441 (492)
...+.+.+|.+..+.+...++..+...++.+..|.++||++||+ .+.+..++..++.++..... ...+++...
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKR------VLLWSILLFSVFTLLCALATNVTQLLILRF 113 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH------HHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 45566677887777777888999999999999999999996543 44444555555554443333 335667777
Q ss_pred HHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 442 IIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 442 liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
+.|++.|..+...+++++|.+..++-++-.++...+..+|
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 153 (398)
T TIGR00895 114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIG 153 (398)
T ss_pred HHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHH
Confidence 8899999999999999999998888887777755444433
No 170
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.29 E-value=0.00034 Score=75.69 Aligned_cols=114 Identities=18% Similarity=0.302 Sum_probs=82.3
Q ss_pred hhcCCCCCccchhhhHHHhhhhhhhcccchhhHHH-hhhcCCCchHHHHHHHHHHHHHHHHHHhcC--CchhHHHHHHHH
Q 039263 368 SSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEIL-LKKYKIPRPLLFTFVLLFSCVGHPFIAYGI--PNSLYAASVIIG 444 (492)
Q Consensus 368 ~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~-~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~--~~~l~~~~~liG 444 (492)
+.+|+++.++....+.+.+...++.+..|+++||+ +||+ .+.+..+++.++++++.... ...++++..++.
T Consensus 38 ~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr------~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~ 111 (493)
T PRK15462 38 NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRM------AVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIV 111 (493)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH------HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Confidence 34788877788888999999999999999999998 6553 45566667777766554322 123555666677
Q ss_pred hhhcchhhhHHHHHHHhhcCCC------cccccccceehhhHHHHHHhh
Q 039263 445 FCFGAQWPLLFAIISEIFGLKY------YSTLYNFGAVASPVGAYILNV 487 (492)
Q Consensus 445 ~~~G~~~~~~P~i~se~FG~k~------~g~nyg~~~la~~~gs~l~~~ 487 (492)
++.|...+..+++++|.|..++ ++..|....++..+++++...
T Consensus 112 iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 112 CGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 7888888888999999997542 666676666666666655443
No 171
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.24 E-value=0.00052 Score=73.15 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=78.5
Q ss_pred HHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-----CchhHHH
Q 039263 365 QIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-----PNSLYAA 439 (492)
Q Consensus 365 ~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-----~~~l~~~ 439 (492)
.+.+. |.++.+.+..++...+...++.+.+|+++||+++|+ .+.+..++..++.+++.... ...+++.
T Consensus 54 ~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~------~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 54 YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV------FLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCch------hHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 34444 888788888899999999999999999999996653 45455555555554443321 1134555
Q ss_pred HHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 440 SVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 440 ~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
..+.|++.|..+.....++.|.|-.|+-++..++...+..+|
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 168 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence 667899999888877888999998888888777754444443
No 172
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.17 E-value=0.0013 Score=68.90 Aligned_cols=122 Identities=12% Similarity=0.219 Sum_probs=73.2
Q ss_pred ccHHHHHhhCCChhhhhHHH-HHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHH
Q 039263 51 YSSDIKTSLGYDQSTLNLLS-FSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCL 128 (492)
Q Consensus 51 ys~~L~~~~~~sq~~l~~is-~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~ 128 (492)
..+.+.+++|+++++...+. ..+.++... ++.+|++.||+|+|..+.++.++..+....++.. ....+ +.|.+..
T Consensus 232 ~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~--~~~~~-~~~~~~~ 308 (402)
T PRK11902 232 STTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVL--AVTPK-HLWTMAL 308 (402)
T ss_pred HHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--HhcCC-cHHHHHH
Confidence 34557778999999998873 434343333 6889999999999888777776655554333221 11111 1233322
Q ss_pred H----HHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHH
Q 039263 129 Y----ICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLY 178 (492)
Q Consensus 129 ~----~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~ 178 (492)
. .+..|.+.+..++.....+.+.+|.+. -++..+..++|+.+.+.+.
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~ 359 (402)
T PRK11902 309 AIGIENLCGGMGTAAFVALLMALCNRSFSATQ---YALLSALASVGRVYVGPTS 359 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH---HHHHHHHHHHHHHHHHHHH
Confidence 2 234566666667777777888888532 2444445566666555543
No 173
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.16 E-value=0.0015 Score=77.44 Aligned_cols=119 Identities=14% Similarity=0.150 Sum_probs=81.6
Q ss_pred ccccHHHHHhhCCChh-hhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHH
Q 039263 49 GLYSSDIKTSLGYDQS-TLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQM 126 (492)
Q Consensus 49 S~ys~~L~~~~~~sq~-~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l 126 (492)
..+...+++.+|+++. +.+++.....++..+ +++.|++.||++++..+.+|.++..++..++... . +.+.+
T Consensus 253 ~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~ 325 (1146)
T PRK08633 253 ANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--P-----SLASV 325 (1146)
T ss_pred HhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--h-----hHHHH
Confidence 3455667788999998 888876666666654 7899999999999988888888777765544322 1 23444
Q ss_pred HHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHH
Q 039263 127 CLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 127 ~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~ 174 (492)
.+..++.|.+.+...........+.+|+ +||.+.|+......+++.+.
T Consensus 326 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~ 374 (1146)
T PRK08633 326 LVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLF 374 (1146)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHH
Confidence 4445555666666665555556678875 69999998765555555433
No 174
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.15 E-value=0.0013 Score=68.24 Aligned_cols=130 Identities=9% Similarity=-0.007 Sum_probs=84.6
Q ss_pred chhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCcc-----chhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHH
Q 039263 339 SIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARST-----TTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLL 413 (492)
Q Consensus 339 t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~-----~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~ 413 (492)
+++++.+|+..++..-+.-++..-+..+.+++|.+..+. +...++..+...++.+.+|.++||++|| ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~ 86 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK------IM 86 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH------HH
Confidence 446777776655533322234445677777888765443 4566888889999999999999998654 34
Q ss_pred HHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccce
Q 039263 414 FTFVLLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGA 475 (492)
Q Consensus 414 l~i~~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~ 475 (492)
+.+..++..++.++..... ...+++...+.|++. +......+.+.|.+..++.++..++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (408)
T PRK09874 87 LLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLS 148 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHH
Confidence 4445555555554443322 335666777778874 456677778889998777776655543
No 175
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.12 E-value=0.0027 Score=75.55 Aligned_cols=151 Identities=14% Similarity=0.088 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHH
Q 039263 29 WFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGY 107 (492)
Q Consensus 29 w~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy 107 (492)
|..+++..+.+++.+.... .....+++.+|.+..+.+.+.....+|... ++..|++.|+++++..+.+|.++..++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 305 (1140)
T PRK06814 228 WLAILGISWFWLVGAVVLS--QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFG 305 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHH
Confidence 3344444444444433322 234446677899999888876666666655 7888999988876666666666555544
Q ss_pred HHHHHHHh-------------cCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHH
Q 039263 108 FMIWLAVT-------------GRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAI 173 (492)
Q Consensus 108 ~~~~~~~~-------------g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i 173 (492)
..+..... ......+.|.+.+..++.|.+.++..........+..|+ +||.+.|+......++..+
T Consensus 306 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~i 385 (1140)
T PRK06814 306 LDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVA 385 (1140)
T ss_pred HHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHH
Confidence 32222100 011112345555555666777777766666667788885 7999999876555555554
Q ss_pred HHHHHHHH
Q 039263 174 LTQLYHAF 181 (492)
Q Consensus 174 ~s~i~~~~ 181 (492)
-+.+...+
T Consensus 386 g~~~~g~l 393 (1140)
T PRK06814 386 GTIILALL 393 (1140)
T ss_pred HHHHHHHH
Confidence 44444443
No 176
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.10 E-value=0.0013 Score=70.89 Aligned_cols=115 Identities=15% Similarity=0.128 Sum_probs=76.1
Q ss_pred hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHH
Q 039263 363 LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASV 441 (492)
Q Consensus 363 ~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~ 441 (492)
...+.+++|.+..+.+...+.+.++..+|.+.+|+++||+++| ..+.+..++..++.++..... ...+++.-.
T Consensus 59 ~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r------~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~ 132 (476)
T PLN00028 59 LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR------YGSAFLLMLTAPAVFCMSLVSSATGFIAVRF 132 (476)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3456667888777777777888888999999999999999654 334444455555554443333 334556666
Q ss_pred HHHhhhcchhhhHHHHHHHhhcCCCcccccccce----ehhhHHHHH
Q 039263 442 IIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGA----VASPVGAYI 484 (492)
Q Consensus 442 liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~----la~~~gs~l 484 (492)
+.|++.|... .....++|+|-.|+-|.-.|+.. ++..++..+
T Consensus 133 l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~ 178 (476)
T PLN00028 133 FIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLL 178 (476)
T ss_pred HHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHH
Confidence 7788877643 34557899998777777666643 444444443
No 177
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.06 E-value=0.015 Score=61.59 Aligned_cols=121 Identities=16% Similarity=0.207 Sum_probs=73.9
Q ss_pred CChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccc
Q 039263 61 YDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSF 139 (492)
Q Consensus 61 ~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~ 139 (492)
++..-.+++.-+.++|..+ -++-|++-||+|+|.+...-.+..-++-.+..+......+..-++-+++|=.+.|+|+|.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 4444455566777788877 478899999999999876666665555432222222111211234477787888999988
Q ss_pred hhhhhhhhhhhhcC--CCCCceeeehhHhhhh---hHHHHHHHHHHHc
Q 039263 140 ANTGALVTCVKNFP--ESRGSVLGLLKGFVGL---SGAILTQLYHAFY 182 (492)
Q Consensus 140 ~~~a~l~t~~k~FP--~~RG~a~Gi~~a~~GL---sa~i~s~i~~~~f 182 (492)
=|.-+ .+.+..+- ++||.-.+.+.++-|+ .|.+.+.|....|
T Consensus 161 DYPlS-AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~f 207 (538)
T KOG0252|consen 161 DYPLS-ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIF 207 (538)
T ss_pred CCcch-HHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHH
Confidence 77632 33455564 4689999987655543 3444444444433
No 178
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.05 E-value=0.00069 Score=70.32 Aligned_cols=111 Identities=12% Similarity=0.065 Sum_probs=83.0
Q ss_pred EEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-Cchh
Q 039263 358 TAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSL 436 (492)
Q Consensus 358 ~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l 436 (492)
++.....++.++++.++.+.+...+++.+...++.+..|+++||++|| ..+.+..++..++.++....+ ...+
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r------~~l~~~~~~~~i~~~~~~~~~~~~~~ 94 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK------PVAIPGAALFIIASLLCSLAETSSLF 94 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh------HHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 444567788888998877778888999999999999999999999654 244445555555554443333 2345
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 437 YAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 437 ~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
++.-.+.|++.|..+....+++.|.+..|+-++..++.
T Consensus 95 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 132 (392)
T PRK10473 95 LAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLL 132 (392)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 66667889999999999999999999888876655553
No 179
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.04 E-value=0.001 Score=68.00 Aligned_cols=108 Identities=19% Similarity=0.132 Sum_probs=79.2
Q ss_pred hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCchhHHHHHH
Q 039263 363 LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSLYAASVI 442 (492)
Q Consensus 363 ~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~l 442 (492)
+.++.++++.+..+.+...++..+...++.+..|.++||++||+ .+.+..+...++.+.........+++...+
T Consensus 23 lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (355)
T TIGR00896 23 LPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEER------SVAAGLLLIAAGILIRSAPGTALLFAGTAL 96 (355)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchH------HHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 34577788988888889999999999999999999999997653 343444444444443322333455677778
Q ss_pred HHhhhcchhhhHHHHHHHhhcCCCcccccccceeh
Q 039263 443 IGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVA 477 (492)
Q Consensus 443 iG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la 477 (492)
.|++.|......|.++.|.| +++-++..++...+
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 130 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMA 130 (355)
T ss_pred HHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHH
Confidence 89999988889999999999 47777666665443
No 180
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.04 E-value=0.0013 Score=68.81 Aligned_cols=136 Identities=18% Similarity=0.167 Sum_probs=87.0
Q ss_pred Cccccccccc-HHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 039263 43 GATYMFGLYS-SDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPK 120 (492)
Q Consensus 43 Gt~Y~fS~ys-~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~ 120 (492)
|.-=.||.|= .-++++|+++..+...+ ......+...=+.+|.+.||+|++.++++--+.+.++-.......++.-..
T Consensus 232 G~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~ 311 (417)
T COG2223 232 GGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHG 311 (417)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccC
Confidence 3333444444 44677999999988776 455555666678999999999988887766665555544433332222111
Q ss_pred chhHHH-H---HHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHHHc
Q 039263 121 PQVWQM-C---LYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 121 ~~~~~l-~---~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f 182 (492)
.+.+.. . ...+..|.| +.++-+-.-+-||++-|.+.|+.-+.-|+|++.........+
T Consensus 312 ~~~~~~~~~~l~l~~~~G~G----nGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~ 373 (417)
T COG2223 312 GSFVVFVAVFLALFVFAGLG----NGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSL 373 (417)
T ss_pred cchHHHHHHHHHHHHHhccC----cchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHH
Confidence 222221 1 122333444 445667788899999999999999999999977755444433
No 181
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.01 E-value=0.00088 Score=70.30 Aligned_cols=128 Identities=12% Similarity=0.105 Sum_probs=87.6
Q ss_pred hhHHHHHHHHHhhccceeEEecchh-HHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHH
Q 039263 340 IDMLIIFIATTCGVGGTLTAIDNLG-QIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVL 418 (492)
Q Consensus 340 ~~FWllf~~~~~~~g~Gl~~i~n~~-~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~ 418 (492)
++.++++..++...+...+ ..=+. .+.+.+|.+....+...++..+.....++.+|.++||++|| ..+.+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k------~~l~~~~ 83 (400)
T PRK11646 11 GKYFLLIDNMLVVLGFFVV-FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK------PMIVTGM 83 (400)
T ss_pred cHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch------HHHHHHH
Confidence 3444444444444443322 22222 34466788877788888888899999999999999999654 3555566
Q ss_pred HHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 419 LFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 419 ~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
++..++.+.....+ ...+++..++.|++.|.......+++.|.+..++.++.+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 140 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLL 140 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 66666665544333 334667777789988888888888999999988888888874
No 182
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.01 E-value=0.0026 Score=66.52 Aligned_cols=128 Identities=11% Similarity=0.099 Sum_probs=96.2
Q ss_pred hHHHHHHHHHhhccceeEE--ec-chhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHH
Q 039263 341 DMLIIFIATTCGVGGTLTA--ID-NLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFV 417 (492)
Q Consensus 341 ~FWllf~~~~~~~g~Gl~~--i~-n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~ 417 (492)
.=|++...++.+.-...++ ++ -.-+|.++++.++.+.+..+++..++..++-+..|.++||++|| ..+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r------~~l~~~ 80 (393)
T PRK09705 7 LNFMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER------RSVAIS 80 (393)
T ss_pred hHHHHHHHHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch------HHHHHH
Confidence 3466666666655554333 22 24466667888888888999999999999999999999999654 466777
Q ss_pred HHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccce
Q 039263 418 LLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGA 475 (492)
Q Consensus 418 ~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~ 475 (492)
.++..++.++..+.+ ...+++.-++.|++.|......+.++.|.|. ++.+.-.+...
T Consensus 81 ~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~ 138 (393)
T PRK09705 81 LLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWS 138 (393)
T ss_pred HHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHH
Confidence 777777777665443 4467788888899999999999999999995 77777666653
No 183
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.95 E-value=0.0014 Score=68.12 Aligned_cols=121 Identities=15% Similarity=0.009 Sum_probs=81.0
Q ss_pred HHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHH
Q 039263 348 ATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPF 427 (492)
Q Consensus 348 ~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll 427 (492)
.+....+.+++...-.-++.+++|.++.+.+...++..+...++.+.+|.++||++||+ .+.+..++..++...
T Consensus 24 ~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~------~l~~~~~~~~~~~~~ 97 (399)
T PRK05122 24 TFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKK------AVVFGLCGCALSGLL 97 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcc------hHHHHHHHHHHHHHH
Confidence 33334444433222223456778888888888999999999999999999999997654 333333333333221
Q ss_pred H---HhcC------CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccc
Q 039263 428 I---AYGI------PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 428 ~---~~~~------~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~ 474 (492)
. .... ...+++.-.+.|++.|.......+.+.|.+..|+.++.-++.
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 153 (399)
T PRK05122 98 YLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWN 153 (399)
T ss_pred HHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhh
Confidence 1 1111 113566677889999999888888899999888888776654
No 184
>PTZ00207 hypothetical protein; Provisional
Probab=96.94 E-value=0.00092 Score=73.82 Aligned_cols=138 Identities=13% Similarity=0.138 Sum_probs=94.2
Q ss_pred HHHHHHHHHhhccceeEEecch--hHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 342 MLIIFIATTCGVGGTLTAIDNL--GQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 342 FWllf~~~~~~~g~Gl~~i~n~--~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
||++...+.+...+|.++.-|+ .++.+++|+++.+.+...++ ...-+..-+.+|+++||+ +|...+.+..+
T Consensus 27 w~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~------G~R~vllig~l 99 (591)
T PTZ00207 27 FALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYL------GPRPIFVLSMT 99 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHh------CcHHHHHHHHH
Confidence 4455555555555666666554 66777888876665554444 222334556789999999 44556777777
Q ss_pred HHHHHHHHHHhc-------CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHHHhh
Q 039263 420 FSCVGHPFIAYG-------IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYILNV 487 (492)
Q Consensus 420 l~~~~~ll~~~~-------~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l~~~ 487 (492)
+..++.++.... +...+++.-++.|++-|..+......+.++| +++-|.--|+...+..+|+.++..
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gLGsaI~~~ 173 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGLGSAILGS 173 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 778877665443 2224566667788888888888888999999 688898888887777777765443
No 185
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.94 E-value=0.0028 Score=64.41 Aligned_cols=118 Identities=14% Similarity=0.093 Sum_probs=79.9
Q ss_pred cHHHHH--hhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHH
Q 039263 52 SSDIKT--SLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCL 128 (492)
Q Consensus 52 s~~L~~--~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~ 128 (492)
...+++ ++|++.++.+......-.+... .+.++++.||+|+|..+.++.++..++..+.+.. .+ .+....
T Consensus 164 ~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-~~------~~~~~~ 236 (310)
T TIGR01272 164 VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-HG------YVAMWF 236 (310)
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CC------HHHHHH
Confidence 455554 3799988877763333333333 6788999999999998888888887776444321 11 111222
Q ss_pred HHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHH
Q 039263 129 YICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLY 178 (492)
Q Consensus 129 ~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~ 178 (492)
..+.|.+.+..|........+.+|++.|.++++. .+..+|+++...+.
T Consensus 237 -~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~ 284 (310)
T TIGR01272 237 -VLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQ 284 (310)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHH
Confidence 2245678888999999999999999989998886 44446666664433
No 186
>PRK10133 L-fucose transporter; Provisional
Probab=96.86 E-value=0.0018 Score=69.09 Aligned_cols=137 Identities=10% Similarity=-0.017 Sum_probs=91.3
Q ss_pred hHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHH
Q 039263 341 DMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLF 420 (492)
Q Consensus 341 ~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l 420 (492)
.|+++++.++.-...-.+...-..++.++++.++.+.+...+.+.++..++-+..|.+.||+++| ..+.+..++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r------~~l~~g~~~ 100 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK------AGIITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHHH
Confidence 56666655544322222222235566667899888888999999999999999999999999654 456666666
Q ss_pred HHHHHHHH---HhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccc-----ccccceehhhHHHHH
Q 039263 421 SCVGHPFI---AYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYST-----LYNFGAVASPVGAYI 484 (492)
Q Consensus 421 ~~~~~ll~---~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~-----nyg~~~la~~~gs~l 484 (492)
..++.+++ ...+ ...+.+.-.+.|++.|.......+++.|.. +++.+. ......+++.+|..+
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~-~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC-ChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766543 2222 234566677889999999999999999864 444443 223334555555444
No 187
>TIGR00898 2A0119 cation transport protein.
Probab=96.83 E-value=0.0011 Score=71.42 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=86.0
Q ss_pred hhHHHhhcCCC---CCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHH
Q 039263 363 LGQIGSSLGYP---ARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYA 438 (492)
Q Consensus 363 ~~~I~~slg~~---~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~ 438 (492)
..+|.++.+.+ +.+.+...+++.++..+|.+.+|.++||++|| ..+.+..++..++.++..+.+ ...+.+
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr------~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 185 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRK------KVLLLSTLVTAVSGVLTAFSPNYTVFLV 185 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccch------HHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 34566667765 56667888999999999999999999999654 345555555555555444433 335667
Q ss_pred HHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHH
Q 039263 439 ASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYI 484 (492)
Q Consensus 439 ~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l 484 (492)
.-.+.|++.|+.+.....+++|++..|+-+..-++...+..+|..+
T Consensus 186 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~ 231 (505)
T TIGR00898 186 FRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL 231 (505)
T ss_pred HHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHH
Confidence 7778899999999999999999999888887766665555555443
No 188
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.78 E-value=0.11 Score=54.47 Aligned_cols=134 Identities=14% Similarity=0.087 Sum_probs=79.9
Q ss_pred cHHHHhcchhHHHHHHHHHhhccceeEEecchhHHHh------hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhh
Q 039263 332 TILQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGS------SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKK 405 (492)
Q Consensus 332 t~~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~------slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~ 405 (492)
.++|...+++--.++...+.+.-+ .++-++.- -+|++..+++.+-++.+.+-.+|-+..|++.. |+
T Consensus 200 a~~~~~~~~~a~~f~~fl~l~t~a-----~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~---~~ 271 (403)
T PF03209_consen 200 AWRQVWASPQARRFFVFLFLGTLA-----FFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLS---RR 271 (403)
T ss_pred HHHHHHhCCChhHHHHHHHHHHHH-----HHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC
Confidence 455666777666555544443221 12222221 24777777777888889998888888887654 33
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHH-h-cCCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccccccc
Q 039263 406 YKIPRPLLFTFVLLFSCVGHPFIA-Y-GIPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 406 ~~~~R~~~l~i~~~l~~~~~ll~~-~-~~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
.+..|...+-+.....+...+.++ . .....|..+..++|++.|..-.-.-+..-|+=...+-|.-=|.
T Consensus 272 ~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~ 341 (403)
T PF03209_consen 272 LGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGA 341 (403)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHH
Confidence 333444433332222222222222 2 2344677888899999999877777777777777776654444
No 189
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.76 E-value=0.0028 Score=68.74 Aligned_cols=109 Identities=13% Similarity=0.145 Sum_probs=77.9
Q ss_pred HhhcCCCCCccchhhhHHHhhhhhhhcccchhhHH-HhhhcCCCchHHHHHHHHHHHHHHHHHHhcC--CchhHHHHHHH
Q 039263 367 GSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEI-LLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI--PNSLYAASVII 443 (492)
Q Consensus 367 ~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~-~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~--~~~l~~~~~li 443 (492)
.+.+|.++.+++..++.+.......-+..|+++|| ++|| ..+.+..++..+++++..... ...++++-++.
T Consensus 42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r------~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~ 115 (489)
T PRK10207 42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK------RTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTI 115 (489)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH------HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 44688887777777888888888888899999998 8654 466667777777776554433 22355777888
Q ss_pred HhhhcchhhhHHHHHHHhhcCCC--cccccccceehhhHH
Q 039263 444 GFCFGAQWPLLFAIISEIFGLKY--YSTLYNFGAVASPVG 481 (492)
Q Consensus 444 G~~~G~~~~~~P~i~se~FG~k~--~g~nyg~~~la~~~g 481 (492)
|++.|...+..+++++|.|-.++ .+.-|++..++.-+|
T Consensus 116 ~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig 155 (489)
T PRK10207 116 AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIG 155 (489)
T ss_pred HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHH
Confidence 99999999999999999996553 233444444333333
No 190
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.73 E-value=0.0052 Score=64.50 Aligned_cols=105 Identities=15% Similarity=0.204 Sum_probs=60.2
Q ss_pred hhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchh
Q 039263 63 QSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFAN 141 (492)
Q Consensus 63 q~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~ 141 (492)
..+.+.+.....++..+ .++.|++.||+|+|.+..+|.++..+++.+++.. . . +.+.+....++.|.+.+..+
T Consensus 256 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~--~--~~~~~~~~~~~~g~~~~~~~ 329 (437)
T TIGR00792 256 PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA--G--S--NLPLILVLIILAGFGQNFVT 329 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--c--h--hHHHHHHHHHHHHHHHHHHH
Confidence 34444443333444443 6788999999999999999998888887665532 1 1 13334444455565555544
Q ss_pred hhhhhhhhhh-----c---CCCCCceeeehhHhhhhhHHH
Q 039263 142 TGALVTCVKN-----F---PESRGSVLGLLKGFVGLSGAI 173 (492)
Q Consensus 142 ~a~l~t~~k~-----F---P~~RG~a~Gi~~a~~GLsa~i 173 (492)
........+. + ++++|.+.|+...+..++..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~l 369 (437)
T TIGR00792 330 GLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQAL 369 (437)
T ss_pred HHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHH
Confidence 3322222222 1 345788888764444343333
No 191
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.72 E-value=0.0021 Score=55.11 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=67.1
Q ss_pred hhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHH
Q 039263 381 VSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIIS 459 (492)
Q Consensus 381 Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~s 459 (492)
.+..++.+.++++..|++.||++||+ .+.+...+..++.++..... ...+.+...+.|++.|.........+.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKP------VLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIA 77 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhH------HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 45667889999999999999986543 44444444555544433322 234566677889999999999999999
Q ss_pred HhhcCCCcccccccceehhhHH
Q 039263 460 EIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 460 e~FG~k~~g~nyg~~~la~~~g 481 (492)
|.+..++.++..+.......+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g 99 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALG 99 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHH
Confidence 9999888887777755443333
No 192
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.68 E-value=0.027 Score=59.53 Aligned_cols=65 Identities=12% Similarity=0.201 Sum_probs=41.8
Q ss_pred ccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCCcHHH--HHHHHHHHHHHHHHHH
Q 039263 47 MFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPPWVV--LAIGSIMNFFGYFMIW 111 (492)
Q Consensus 47 ~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gpr~~--~~iG~vl~~~Gy~~~~ 111 (492)
.|+.|+.=|+++.|+|.+|++++-.+..+.. ...+..|.+.||+|.|.- ..+..++...|=+.+|
T Consensus 26 ~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~ 93 (412)
T PF01306_consen 26 FLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIY 93 (412)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4667778888889999999999744444444 468899999999995553 3444444444543333
No 193
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.62 E-value=0.0027 Score=68.70 Aligned_cols=101 Identities=17% Similarity=0.200 Sum_probs=74.9
Q ss_pred ccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCC-------chhHHHHHHHHhhhc
Q 039263 376 STTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIP-------NSLYAASVIIGFCFG 448 (492)
Q Consensus 376 ~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~-------~~l~~~~~liG~~~G 448 (492)
+.+...+...++..+|.+.+|+++||++||+ .+.+..++..++.++...... ..+++.-.+.|++.|
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKR------VYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 4456788899999999999999999996653 444455555555444333221 246677778899999
Q ss_pred chhhhHHHHHHHhhcCCCcccccccceehhhHHH
Q 039263 449 AQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGA 482 (492)
Q Consensus 449 ~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs 482 (492)
+.++..|.+++|.|..|+-|...++......+|.
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~ 164 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGI 164 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888877655544443
No 194
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.59 E-value=0.065 Score=57.52 Aligned_cols=115 Identities=16% Similarity=0.236 Sum_probs=67.1
Q ss_pred HhhCCChhhhhHH-HHHhhhhccccccceeeeccC----Cc-HHHHHHHHHHHHHHHHHHHHHHhcCCC--CchhHHHHH
Q 039263 57 TSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEIT----PP-WVVLAIGSIMNFFGYFMIWLAVTGRIP--KPQVWQMCL 128 (492)
Q Consensus 57 ~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~----Gp-r~~~~iG~vl~~~Gy~~~~~~~~g~i~--~~~~~~l~~ 128 (492)
+.+|++....+++ .++-.+=+..-+.-|.+.||. |+ |+=++.|++-..+-+.++|..- ..+ ....+.+..
T Consensus 41 dv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p--~~~~~~k~~ya~vt 118 (467)
T COG2211 41 DVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP--DFSMTGKLIYALVT 118 (467)
T ss_pred cccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC--CcccCcchHHHHHH
Confidence 4678998888886 555555555678999999974 54 4445778887777777666442 221 111232223
Q ss_pred HHHHhhccccchh--hhhhhhhhhhcCCCCCceeeehhHhhhhhHHHH
Q 039263 129 YICIGANSQSFAN--TGALVTCVKNFPESRGSVLGLLKGFVGLSGAIL 174 (492)
Q Consensus 129 ~~~l~g~g~~~~~--~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~ 174 (492)
|..+ +.+-+..+ -.++.+.+-.=|++|-...+.-..+..++..+.
T Consensus 119 Y~l~-~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~ 165 (467)
T COG2211 119 YMLL-GLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLV 165 (467)
T ss_pred HHHH-HHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222 22222211 145666777778888877776555554443333
No 195
>PRK09848 glucuronide transporter; Provisional
Probab=96.44 E-value=0.0091 Score=63.43 Aligned_cols=104 Identities=13% Similarity=0.072 Sum_probs=61.9
Q ss_pred HHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhh
Q 039263 56 KTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGA 134 (492)
Q Consensus 56 ~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g 134 (492)
++.+|.++.+.........++.. ..++.+++.||+|+|.+..+|.++..+|+.+++.. +..+.|.+.....+.+
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~g 330 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV-----SVWSLPVALVALAIAS 330 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----CchhHHHHHHHHHHHH
Confidence 44567665443333333334443 36788999999999999999999888898766521 1123454444455666
Q ss_pred ccccchhhhhhhhhhhhcC--------CCCCceeeehh
Q 039263 135 NSQSFANTGALVTCVKNFP--------ESRGSVLGLLK 164 (492)
Q Consensus 135 ~g~~~~~~a~l~t~~k~FP--------~~RG~a~Gi~~ 164 (492)
.|.+...+.......+.=| +++|...|+..
T Consensus 331 ~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~ 368 (448)
T PRK09848 331 IGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFS 368 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHH
Confidence 6666665544433333333 23477666643
No 196
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=96.42 E-value=0.0042 Score=64.69 Aligned_cols=115 Identities=7% Similarity=-0.045 Sum_probs=78.9
Q ss_pred hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHh-cCCchhHHHHH
Q 039263 363 LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAY-GIPNSLYAASV 441 (492)
Q Consensus 363 ~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~-~~~~~l~~~~~ 441 (492)
+.++.++++.++.+.+...+.+.+...++.+.+|+++||++||+ .+.........+...... .....+.+.=.
T Consensus 14 lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 87 (368)
T TIGR00903 14 LSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRW------FLFGSLATFAAAAGRLLDPFNYEWLLACQL 87 (368)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH------HHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45677788888888888899999999999999999999997542 222222222222221222 23335667777
Q ss_pred HHHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHH
Q 039263 442 IIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYI 484 (492)
Q Consensus 442 liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l 484 (492)
+.|++-|........ ++|.|-.|+-++.-++...+.++|..+
T Consensus 88 l~G~g~~~~~~~~~~-~~~~~~~~~r~~a~~~~~~~~~lG~~l 129 (368)
T TIGR00903 88 LAALGQPFLLNAFAP-AASQIREERRDLVISLLSFAMYLGIIF 129 (368)
T ss_pred HHHhHhHHHHHHHHH-HHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 889988865544444 488888888888888877666666544
No 197
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.36 E-value=0.024 Score=59.87 Aligned_cols=151 Identities=19% Similarity=0.129 Sum_probs=99.4
Q ss_pred cchHHH-HHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHH
Q 039263 26 TGRWFM-VFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMN 103 (492)
Q Consensus 26 ~~Rw~~-l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~ 103 (492)
.+|.+. ++++.+++...+..|.|. +..+++.-+++......+-..+.+... +.+..+++..|+|+|.++.++.+..
T Consensus 206 ~~~~~~Fll~~~l~~~~~~~~~~f~--~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 206 NPRFLVFLLAAFLIGISHAAYYTFF--SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 444544 566777788888888876 455766655665555554323333333 4778999999999999999998866
Q ss_pred HHHHHHHHHHHhcCCCCchhHHHH--HH-HHHhhccccchhhhhhhhhhhhcCC-CCCceeeehh-HhhhhhHHHHHHHH
Q 039263 104 FFGYFMIWLAVTGRIPKPQVWQMC--LY-ICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLK-GFVGLSGAILTQLY 178 (492)
Q Consensus 104 ~~Gy~~~~~~~~g~i~~~~~~~l~--~~-~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~-a~~GLsa~i~s~i~ 178 (492)
.+=|.++. -..++. .+... .. ..+-|..-+....+++.-..++.|+ .|.++-|+.. ...|+|+.+-+.+.
T Consensus 284 ~vR~~l~a----~~~~~~-~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 284 AVRWLLYA----YFSDPW-PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HHHHHHHH----HhcCCc-HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 55554333 111211 11111 11 1234555566788899999999996 5899999875 46799988887777
Q ss_pred HHHcC
Q 039263 179 HAFYG 183 (492)
Q Consensus 179 ~~~f~ 183 (492)
...++
T Consensus 359 G~l~~ 363 (400)
T PF03825_consen 359 GWLYD 363 (400)
T ss_pred HHHHH
Confidence 66665
No 198
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.26 E-value=0.018 Score=61.63 Aligned_cols=126 Identities=18% Similarity=0.274 Sum_probs=93.4
Q ss_pred HHHhcchhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHH
Q 039263 334 LQALFSIDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLL 413 (492)
Q Consensus 334 ~~~l~t~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~ 413 (492)
.-++-..|||=-|-=+.. .++...+=..|..+.+|++++++...++.++-.--.--++.||++||+. ++..+
T Consensus 23 l~~if~vE~WERFsyYGm---raiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~L-----G~~~t 94 (498)
T COG3104 23 LYLIFFVELWERFSYYGM---RAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVL-----GTRRT 94 (498)
T ss_pred HHHHHHHHHHHHHhhhhh---HHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhc-----chhHH
Confidence 345666777755532211 1122333333444447788888877778877777888999999999985 55567
Q ss_pred HHHHHHHHHHHHHHHHhc---CCchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCc
Q 039263 414 FTFVLLFSCVGHPFIAYG---IPNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYY 467 (492)
Q Consensus 414 l~i~~~l~~~~~ll~~~~---~~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~ 467 (492)
+++.-+++.++|++++.. .+..++++.+++++++|.+=+-..++++|.|..++-
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp 151 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP 151 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc
Confidence 788889999999988655 355899999999999999999999999999997653
No 199
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.15 E-value=0.025 Score=61.96 Aligned_cols=140 Identities=18% Similarity=0.247 Sum_probs=90.3
Q ss_pred HHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHH
Q 039263 32 VFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMI 110 (492)
Q Consensus 32 l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~ 110 (492)
++.+.+..+..+.. |.+.---.++.+|.+....+++..+..+|+.. ++..+++.+|++++..+..+.+..++....+
T Consensus 224 l~~~~~~~l~~~a~--~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 224 LLRSFLFNLFASAV--WALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHHHhhhHH--HHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHH
Confidence 33344445544443 33433334677999999999988888888876 6788889999988887777777666554332
Q ss_pred HHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCC-CCceeeehh----HhhhhhHHHHHHHHHH
Q 039263 111 WLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPES-RGSVLGLLK----GFVGLSGAILTQLYHA 180 (492)
Q Consensus 111 ~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~~----a~~GLsa~i~s~i~~~ 180 (492)
+.. .+.|..+...++.|.+....++..-....+.=|++ ||.+.++.. +...+|+.+...+.+.
T Consensus 302 -----al~--~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~ 369 (524)
T PF05977_consen 302 -----ALS--PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH 369 (524)
T ss_pred -----hcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 23566665666777766666655555567788974 999999853 3333455555555443
No 200
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.11 E-value=0.013 Score=61.49 Aligned_cols=132 Identities=15% Similarity=0.173 Sum_probs=111.6
Q ss_pred hhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 340 IDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 340 ~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
..-|.+-+.-|+...+..+...-+.+|+++++.+..++...|++++..-.+|-+....+.||+ +|...+...+.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~------~Rr~lLl~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL------ERRRLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc------chHHHHHHHHH
Confidence 345667777777778888999999999999999999999999999999999999999999999 55567778888
Q ss_pred HHHHHHHHHHhcCCc-hhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccccccceeh
Q 039263 420 FSCVGHPFIAYGIPN-SLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVA 477 (492)
Q Consensus 420 l~~~~~ll~~~~~~~-~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la 477 (492)
+..++.++.+..+.- .+.++=++.|++-|.+|++.-++++|+=.+++-++-=+.+.++
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G 145 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTG 145 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHH
Confidence 889999887665544 5667778899999999999999999999998888766665433
No 201
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=95.95 E-value=0.011 Score=62.98 Aligned_cols=106 Identities=18% Similarity=0.137 Sum_probs=77.1
Q ss_pred cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHH--Hh-cCCchhHHHHHHHHhh
Q 039263 370 LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFI--AY-GIPNSLYAASVIIGFC 446 (492)
Q Consensus 370 lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~--~~-~~~~~l~~~~~liG~~ 446 (492)
++.+..+.+...+.+.+...++.+..|+++||+++|+ .+.+..++..++.++. .. .....+++.-++.|++
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKW------SIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcch------hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHh
Confidence 4566667788889999999999999999999997653 3434444444443332 21 1233566777888999
Q ss_pred hcchhhhHHHHHHHhhcCCCcccccccceehhhHH
Q 039263 447 FGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVG 481 (492)
Q Consensus 447 ~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~g 481 (492)
.|..+...+.+++|+|-.|+-++-.++...+..+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 179 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLG 179 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888777755543333
No 202
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.88 E-value=0.0026 Score=71.21 Aligned_cols=108 Identities=12% Similarity=0.065 Sum_probs=81.4
Q ss_pred hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC----------
Q 039263 363 LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI---------- 432 (492)
Q Consensus 363 ~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~---------- 432 (492)
+.+|-+.++++..+.+..++.+.+++.++-+..|++.||..||+ .+.+..+++.++.++++...
T Consensus 56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~------~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI------VIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce------EEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 45666678888888899999999999999999999999985543 33444555555554433210
Q ss_pred ------------------------------------------CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCcccc
Q 039263 433 ------------------------------------------PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYSTL 470 (492)
Q Consensus 433 ------------------------------------------~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~n 470 (492)
...++++=++.|++-|..+.+.++++.|.+..|+-+..
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHH
Confidence 01245677788999999999999999999998888887
Q ss_pred ccccee
Q 039263 471 YNFGAV 476 (492)
Q Consensus 471 yg~~~l 476 (492)
.++...
T Consensus 210 ~~i~~~ 215 (633)
T TIGR00805 210 IGILES 215 (633)
T ss_pred HHHHHH
Confidence 777543
No 203
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=95.87 E-value=0.016 Score=64.00 Aligned_cols=125 Identities=22% Similarity=0.169 Sum_probs=90.8
Q ss_pred hcchhHHHHHHHHHhhccc---eeEEec-chhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchH
Q 039263 337 LFSIDMLIIFIATTCGVGG---TLTAID-NLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPL 412 (492)
Q Consensus 337 l~t~~FWllf~~~~~~~g~---Gl~~i~-n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~ 412 (492)
.++++|+..+..+.+..-+ ++..-+ -+.+|.+++|.+ ...+..+...++.++.+-.+.|-+||.+ +|.+
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf------GRr~ 109 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF------GRRY 109 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh------cchH
Confidence 4667788777654443322 222222 257888889865 5566777889999999999999999999 5667
Q ss_pred HHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCccc
Q 039263 413 LFTFVLLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYYST 469 (492)
Q Consensus 413 ~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~g~ 469 (492)
.+.+..++.++++...+... ...+..+.++.|++.|.... ....++|+--.|+-..
T Consensus 110 ~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~ 166 (599)
T PF06609_consen 110 FFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGL 166 (599)
T ss_pred HHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhh
Confidence 88899999999988765544 33577788888999988875 4566899997665543
No 204
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.80 E-value=0.029 Score=58.97 Aligned_cols=100 Identities=18% Similarity=0.244 Sum_probs=75.1
Q ss_pred HHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhh
Q 039263 56 KTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGA 134 (492)
Q Consensus 56 ~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g 134 (492)
++.+||++.|+-.++...++.+.. ++++|++-||+|+|.++.+|.++..+-. ++..+ ...+ . -++.++.+.|
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~--~~~~~-~~~~-~---~f~i~gll~g 352 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA--LYLIF-LEGE-L---DFWILGLLVG 352 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH--HHHHH-cccc-H---HHHHHHHHHH
Confidence 558999999999998888888865 8999999999999999988888765542 22222 2211 2 2445666778
Q ss_pred ccccchhhhhhhhhhhhcCCC-CCceeee
Q 039263 135 NSQSFANTGALVTCVKNFPES-RGSVLGL 162 (492)
Q Consensus 135 ~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi 162 (492)
...|-....+=..-.|+.|++ -|.--|+
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFgl 381 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGL 381 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeeh
Confidence 888888888888899999975 4766665
No 205
>PF13347 MFS_2: MFS/sugar transport protein
Probab=95.65 E-value=0.065 Score=56.58 Aligned_cols=143 Identities=15% Similarity=0.197 Sum_probs=81.4
Q ss_pred chHHHHHHHHHH-HHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHH
Q 039263 27 GRWFMVFASLLI-MAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 27 ~Rw~~l~a~~~i-~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
++|..+....+. ++..+..-.+..| -.+..+|-+ ...+.+.....+.+.. .++.+++.||+|+|.+..+|.++..
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y--~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPY--YFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAA 301 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHH--HHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHH
Confidence 445544444444 3444333322222 333334444 3445555555555544 6788999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC--------CCCCceeee----hhHhhhhhHH
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP--------ESRGSVLGL----LKGFVGLSGA 172 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP--------~~RG~a~Gi----~~a~~GLsa~ 172 (492)
+++.+++..-. . +.|.+....++.|.+.+..+..........-+ ++.|...|+ .|-..|+++.
T Consensus 302 ~~~~~~~~~~~---~--~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 302 LGFLLLFFLGP---G--SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred HHHHHHHHHHh---h--hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 99887775533 1 24556666677777776665433332222222 233555554 2455555555
Q ss_pred HHHHH
Q 039263 173 ILTQL 177 (492)
Q Consensus 173 i~s~i 177 (492)
+...+
T Consensus 377 i~g~~ 381 (428)
T PF13347_consen 377 IVGLL 381 (428)
T ss_pred HHHHH
Confidence 55443
No 206
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=95.63 E-value=0.015 Score=61.34 Aligned_cols=117 Identities=13% Similarity=-0.005 Sum_probs=82.1
Q ss_pred hHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc----CCchhHHH
Q 039263 364 GQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG----IPNSLYAA 439 (492)
Q Consensus 364 ~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~----~~~~l~~~ 439 (492)
.++.+.++.++.+.+...+...++..++.+..|.+.||+++| ..+.+..+++.++.+++... +...+.+.
T Consensus 27 ~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r------~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~ 100 (410)
T TIGR00885 27 PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK------AGILLGLFLYALGAFLFWPAAEIMNYTLFLVG 100 (410)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch------HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 455556788877888888999999999999999999999654 46666777777776654221 12245667
Q ss_pred HHHHHhhhcchhhhHHHHHHHhhcCCCcccccc----cceehhhHHHHHHh
Q 039263 440 SVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYN----FGAVASPVGAYILN 486 (492)
Q Consensus 440 ~~liG~~~G~~~~~~P~i~se~FG~k~~g~nyg----~~~la~~~gs~l~~ 486 (492)
..+.|++.|.......+.+.|..-.++.++.-+ +..++..+|+.+..
T Consensus 101 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 101 LFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred HHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999988888887765454444333 34455555554443
No 207
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.61 E-value=0.083 Score=57.08 Aligned_cols=166 Identities=11% Similarity=0.151 Sum_probs=98.6
Q ss_pred cccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHH--HhcCCCC
Q 039263 44 ATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLA--VTGRIPK 120 (492)
Q Consensus 44 t~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~--~~g~i~~ 120 (492)
..++=..|+..+-++-|+++.+...+.+...+-.. +.+.+.++.||+|+|+.++++..++.+-..++-.. ......
T Consensus 285 Gi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~- 363 (485)
T KOG0569|consen 285 GINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG- 363 (485)
T ss_pred CcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 35566789999999999999987777555555544 58899999999999999999888777655444322 222221
Q ss_pred chhHHH---HHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHHHHHHHcCCChhHHHHHHHHH
Q 039263 121 PQVWQM---CLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQLYHAFYGDNSKALILLIAWL 196 (492)
Q Consensus 121 ~~~~~l---~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~~~~~fllfla~~ 196 (492)
...+.. +.+..+...+.|.. ..+.--...-||. .|..|........-++.++....+--..+- .+.|.+++-+.
T Consensus 364 ~~~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~-~g~~~filF~i 441 (485)
T KOG0569|consen 364 SWLSYLCIAAIFLFIISFAIGPG-PIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV-IGPYVFILFVI 441 (485)
T ss_pred hHHHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHH
Confidence 101111 12223333333332 1233335567875 699888887777777766665544333321 11255554445
Q ss_pred HHHHHHhhhhcccccccc
Q 039263 197 PAAISFVFLRTFRIIKIV 214 (492)
Q Consensus 197 ~~~v~~~~~~~i~~~~~~ 214 (492)
|.++.. .+.-+++|+.
T Consensus 442 ~~~~~~--i~~~~~lPET 457 (485)
T KOG0569|consen 442 PLAIFL--IYLYRYLPET 457 (485)
T ss_pred HHHHHH--HHHHHhCccc
Confidence 544433 3355666754
No 208
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=95.45 E-value=0.048 Score=59.29 Aligned_cols=82 Identities=20% Similarity=0.239 Sum_probs=67.4
Q ss_pred chhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHHHHhhhcchhhhHHH
Q 039263 378 TTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASVIIGFCFGAQWPLLFA 456 (492)
Q Consensus 378 ~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~liG~~~G~~~~~~P~ 456 (492)
+..++..++++..|.+.+|.++|+++|| ..+.++.++..++-++.+... ...+.++-++.|++.|+.-.+.|.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk------~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~pi 165 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK------KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchh
Confidence 6889999999999999999999999665 466666777777766655443 446789999999999999999999
Q ss_pred HHHHhhcCC
Q 039263 457 IISEIFGLK 465 (492)
Q Consensus 457 i~se~FG~k 465 (492)
.++|+=-.+
T Consensus 166 y~sEiap~~ 174 (513)
T KOG0254|consen 166 YISEIAPAH 174 (513)
T ss_pred hHhhcCChh
Confidence 999987543
No 209
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.19 E-value=0.049 Score=56.67 Aligned_cols=100 Identities=19% Similarity=0.249 Sum_probs=71.1
Q ss_pred hhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhcchhhhHHHHH
Q 039263 379 TFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSLYAASVIIGFCFGAQWPLLFAII 458 (492)
Q Consensus 379 ~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~~~P~i~ 458 (492)
..=|.+++..++--..||-+||+.+|| -.+.+..+..++..++++....-..++.+=..|-++=+..++--+++
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRk------pvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAii 145 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRK------PVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAII 145 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHH
Confidence 344899999999999999999999654 34545555555566555544433334443455666677889999999
Q ss_pred HHhhcCCCcc-------ccccc-ceehhhHHHHH
Q 039263 459 SEIFGLKYYS-------TLYNF-GAVASPVGAYI 484 (492)
Q Consensus 459 se~FG~k~~g-------~nyg~-~~la~~~gs~l 484 (492)
+|.+-+||-+ +-|++ ..++|++|.|+
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 9999877654 55555 46778888876
No 210
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.14 E-value=0.54 Score=49.75 Aligned_cols=59 Identities=5% Similarity=0.025 Sum_probs=42.7
Q ss_pred ccHHHHHh-hCCChhhhhHHHHHhhhhcc--ccccceeeeccCCcHHHHHHHHHHHHHHHHH
Q 039263 51 YSSDIKTS-LGYDQSTLNLLSFSKDVGGN--VGVLSGLINEITPPWVVLAIGSIMNFFGYFM 109 (492)
Q Consensus 51 ys~~L~~~-~~~sq~~l~~is~~~~vg~~--~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~ 109 (492)
..|-|.+. .|+|+.|++.--.-...-++ +-++..++.|..+.|++++++++...+-|.+
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~l 87 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLL 87 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 45667776 89999999872111122222 3578899999999999999999877666654
No 211
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=95.07 E-value=0.031 Score=60.60 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=73.5
Q ss_pred CccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCc-hhHHHHHHHHhhhcchhhh
Q 039263 375 RSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPN-SLYAASVIIGFCFGAQWPL 453 (492)
Q Consensus 375 ~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~-~l~~~~~liG~~~G~~~~~ 453 (492)
....+..+++-++..+|-+++|.+||+++| ...+.+..++..+..+..++.+.- .+.+.=.+.|++.++.+.+
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GR------k~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGR------KPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhccc------HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHH
Confidence 334556788999999999999999999854 456777777777777666655544 5667777889999999999
Q ss_pred HHHHHHHhhcCCCccccccc
Q 039263 454 LFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 454 ~P~i~se~FG~k~~g~nyg~ 473 (492)
...+++|++++|+=+..=.+
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred hHhhheeecCcchhhHHHHH
Confidence 99999999999987765444
No 212
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=94.97 E-value=0.22 Score=53.86 Aligned_cols=120 Identities=14% Similarity=0.219 Sum_probs=78.4
Q ss_pred HHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcH--HHHHHHHHHH----H
Q 039263 32 VFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPW--VVLAIGSIMN----F 104 (492)
Q Consensus 32 l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr--~~~~iG~vl~----~ 104 (492)
|++-.+-+-...| ..+...---++.+|+++.|+..+.+..++.+.. .+..|++.||+||| .++.+..++. .
T Consensus 287 Lia~~l~~dg~~t--i~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 287 LIAYFLYSDGVNT--IISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 4443443433333 333444445668999999998887777777765 67889999999999 6655444433 1
Q ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCC
Q 039263 105 FGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESR 156 (492)
Q Consensus 105 ~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~R 156 (492)
.|+..++-. .+...+-|.++.++++.|...|..+.++=..-.|-=|+.|
T Consensus 365 ~g~~G~~~~---~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~ 413 (477)
T PF11700_consen 365 YGLFGFWPS---FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR 413 (477)
T ss_pred HHHHHhhhc---ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch
Confidence 222222211 2111235788888889999999988888888888888644
No 213
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.94 E-value=6.5 Score=42.63 Aligned_cols=382 Identities=13% Similarity=0.099 Sum_probs=193.2
Q ss_pred ccccchHHHHHHHHHHHHhhCccc--ccccccHHHHH-hhCCChhhhhHHHHHhhhhc-cccccceeeeccCCc-HHHHH
Q 039263 23 GVLTGRWFMVFASLLIMAVAGATY--MFGLYSSDIKT-SLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITPP-WVVLA 97 (492)
Q Consensus 23 ~~~~~Rw~~l~a~~~i~l~~Gt~Y--~fS~ys~~L~~-~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~Gp-r~~~~ 97 (492)
-..+.+|+++....+.++..+..+ .+..=-|.+++ ..+=+++..+++..+..+|- ++++..|..-.|.+. |..++
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 345789999888888888877732 22222334433 35556666777644444554 568999999999874 66778
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhh--hhhhcCCCCCceeeehhHhhhhhHHHHH
Q 039263 98 IGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVT--CVKNFPESRGSVLGLLKGFVGLSGAILT 175 (492)
Q Consensus 98 iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t--~~k~FP~~RG~a~Gi~~a~~GLsa~i~s 175 (492)
.|.+...+|-.+ +++++-..++ ..|++.+--.+.|.|.+. .+.+.. +.+..|++|-++........ .-|.++.
T Consensus 107 ~s~ii~~~g~ll-Y~~l~~~~~~-~~y~mL~~R~l~Gvg~~n--~a~lR~Y~a~~s~~~dR~rA~a~~~~~~-vlg~ilG 181 (488)
T KOG2325|consen 107 VSFLIAIIGNLL-YLALAYVPNG-VKYLMLVARILTGVGVGN--FAVLRAYIADASTVEDRPRAFAATSGGF-VLGIILG 181 (488)
T ss_pred HHHHHHHHHHHH-HHHHHhcccc-hHHHHHHHHHHcCcCccc--HHHHHHHHHhccCccchHHHHHHhhhHH-HHHHHHh
Confidence 899999999754 4344444332 234444444566766544 455655 55678888877766555433 2456666
Q ss_pred HHHHHHcCC-----------------ChhHHHHHHHHHHHHHHHhhhhcccccccc---c---c------chh---hhHH
Q 039263 176 QLYHAFYGD-----------------NSKALILLIAWLPAAISFVFLRTFRIIKIV---R---Q------ANE---LKIF 223 (492)
Q Consensus 176 ~i~~~~f~~-----------------~~~~fllfla~~~~~v~~~~~~~i~~~~~~---~---~------~~~---~~~f 223 (492)
+..+.+|.+ ....++..+.+.-.+ ++..++.|..+.+ + + +.+ ...+
T Consensus 182 p~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~--v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (488)
T KOG2325|consen 182 PTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYI--VIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVKKPKL 259 (488)
T ss_pred HHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHH--HHHHhheeecccCccccccccchhhccchhhhccCCh
Confidence 777776642 122344333332222 2222344444321 1 0 000 1111
Q ss_pred HHHHHHHHHHHHHHHHHhhhhc-----------ccccCccchhhhhHHHHH---HHhhhhhhhhHHhhhhccCCCCcc-c
Q 039263 224 YKMLYISLGLAGFLMVVIILQN-----------KYAFKRFEYVGSASLVLI---LLFLPIAIVIKEEISLRKSKKPSL-E 288 (492)
Q Consensus 224 ~~~~~~~~~~~~~l~v~~~~~~-----------~~~~~~~~~~~~~~~~~~---ll~~p~~~~~~~~~~~~~~~~~~~-~ 288 (492)
.......+.. .+........+ ...-++.+...-..+++. ++..++......+....-.+++-. -
T Consensus 260 d~~~~~vc~~-~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~ 338 (488)
T KOG2325|consen 260 DWVAVLVCIF-LRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILL 338 (488)
T ss_pred hHHHHHHHHH-HHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeee
Confidence 1111110100 11111111000 011111111111111111 111122111111111100110000 0
Q ss_pred cC--------CCCCccccccCCCCCCCCCCccccccccccccCCCCCCCcccHHHHhcchhHHHHHHHHHhhccceeEEe
Q 039263 289 DA--------NSHPELKIVTELPPQQASPSTEAQVCCTENIFMPPDRGEDYTILQALFSIDMLIIFIATTCGVGGTLTAI 360 (492)
Q Consensus 289 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~~~l~t~~FWllf~~~~~~~g~Gl~~i 360 (492)
.. .-.-+......+ ....+.+ .....-++++|-+-.....+|++.+.+....|-+.-++
T Consensus 339 g~l~~f~~~~i~~yp~~~~s~p----v~~~~~~---------~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~ 405 (488)
T KOG2325|consen 339 GFLIFFLSYYIFTYPWGFYSGP----VQPYNTT---------YAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFI 405 (488)
T ss_pred hHHHHHHhhheeeeeccccccc----ccccccc---------ccCcCcccchhhccCcccChhhheeehhheeccccccc
Confidence 00 000000000000 0000000 00111246788888999999999999998899999988
Q ss_pred cchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHH
Q 039263 361 DNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGH 425 (492)
Q Consensus 361 ~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ 425 (492)
+....=.-+.-+.+..+.+.=.++++.+..+|+..+.++-....-+++++.|.+....++..+..
T Consensus 406 ~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 406 STALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAAL 470 (488)
T ss_pred cchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHH
Confidence 87555444433334566667788899999999999999998888888877777766555544443
No 214
>PRK10429 melibiose:sodium symporter; Provisional
Probab=94.73 E-value=0.12 Score=55.62 Aligned_cols=61 Identities=10% Similarity=-0.013 Sum_probs=37.3
Q ss_pred cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhh
Q 039263 80 GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANT 142 (492)
Q Consensus 80 ~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~ 142 (492)
.++.+++.||+|+|.+..++.++..++...++.. +.....+.|.+.....+.+.+.+..+.
T Consensus 283 ~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 283 LILFPRLVKSLSRRILWAGASIFPVLSCGVLLLM--GLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH--hccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999988888766666544322 111112234444444555555555443
No 215
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=94.21 E-value=0.058 Score=58.11 Aligned_cols=132 Identities=13% Similarity=0.047 Sum_probs=90.4
Q ss_pred HhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcC-
Q 039263 40 AVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGR- 117 (492)
Q Consensus 40 l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~- 117 (492)
...+..+.+-.+.+ +.+|+++.+++++.....++... ....+++.+|++.|.++.++.++..+++..........
T Consensus 267 ~~~~~~~~~f~~~~---~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~ 343 (468)
T TIGR00788 267 NLPGASGSVFCATT---QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWN 343 (468)
T ss_pred hcCCCCceeEEEEc---ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccc
Confidence 33444433333444 35899999999874444455544 67788888999999999999999888875432221111
Q ss_pred ----CCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCC-CCCceeeehhHhhhhhHHHHHH
Q 039263 118 ----IPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPE-SRGSVLGLLKGFVGLSGAILTQ 176 (492)
Q Consensus 118 ----i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~-~RG~a~Gi~~a~~GLsa~i~s~ 176 (492)
+++ .+.+.....+.+.+.+...++.+...++.=|+ ++|+..|+..++..+|..+-+.
T Consensus 344 ~~~gi~~--~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 344 LAFGISD--EVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred cccCCCC--eeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 121 22233345566777778888888888998885 6899999999988998777664
No 216
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.13 E-value=0.19 Score=53.71 Aligned_cols=112 Identities=19% Similarity=0.244 Sum_probs=78.0
Q ss_pred ccccHHHHHhhCCChhhhhHHHHHhhhhccccccceeeeccCC-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh
Q 039263 49 GLYSSDIKTSLGYDQSTLNLLSFSKDVGGNVGVLSGLINEITP-----PWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV 123 (492)
Q Consensus 49 S~ys~~L~~~~~~sq~~l~~is~~~~vg~~~~~~~G~~~D~~G-----pr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~ 123 (492)
..-.+-+|+++|++.+|++.+....++--.+-++.|.+.|.++ +|+=+++|+++..+++..+. ...+...+ .
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~-~~~~~~~s--~ 86 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLA-LLPASESS--A 86 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHH-hcccccch--h
Confidence 3446789999999999999998877777778899999999986 66667888888866654333 33332222 3
Q ss_pred HHHHHHHHHhhccccchhhhh---hhhhhhhcCCCCCceeeeh
Q 039263 124 WQMCLYICIGANSQSFANTGA---LVTCVKNFPESRGSVLGLL 163 (492)
Q Consensus 124 ~~l~~~~~l~g~g~~~~~~a~---l~t~~k~FP~~RG~a~Gi~ 163 (492)
.....+..+...|..+.|.++ ++-.+|.-|++||......
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~ 129 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFV 129 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHH
Confidence 334445566777777777654 4446677888777655443
No 217
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=94.07 E-value=0.072 Score=55.02 Aligned_cols=86 Identities=15% Similarity=0.220 Sum_probs=63.4
Q ss_pred cccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCch
Q 039263 44 ATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQ 122 (492)
Q Consensus 44 t~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~ 122 (492)
..|.|.+| ++||++..|++.+-.++...+. +|.+.|.+.||+|+|..+++-+++..+... ..+.++
T Consensus 54 GpY~Y~LY-----~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl------~k~~~~-- 120 (354)
T PF05631_consen 54 GPYLYALY-----ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL------TKHSSN-- 120 (354)
T ss_pred cchhHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH------HHhccc--
Confidence 36888877 3699999999998777776665 599999999999999999999998887743 334443
Q ss_pred hHHHHHHHHHhhccccchhh
Q 039263 123 VWQMCLYICIGANSQSFANT 142 (492)
Q Consensus 123 ~~~l~~~~~l~g~g~~~~~~ 142 (492)
++.+.+=-+++|++....++
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 44343334677776665544
No 218
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=94.00 E-value=0.067 Score=57.88 Aligned_cols=114 Identities=11% Similarity=0.085 Sum_probs=74.2
Q ss_pred ecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCC------
Q 039263 360 IDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIP------ 433 (492)
Q Consensus 360 i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~------ 433 (492)
..++.++.+.+|.+....+....+-.+...+.-.+.|++|||..+|++..|++.+. ....+.++.+++.....
T Consensus 24 ~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~-g~~~~~~~l~ll~~~~~~~~~~~ 102 (477)
T TIGR01301 24 LSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAA-GAALVAFAVILIGFAADIGHLFG 102 (477)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHH-HHHHHHHHHHHHHhCchhhhhcc
Confidence 45677788889998777777788889999999999999999865555545555443 23333334333322111
Q ss_pred ------------chhHHHHHHHHhhhcchhhhHHHHHHHhhcCCCc--ccccccc
Q 039263 434 ------------NSLYAASVIIGFCFGAQWPLLFAIISEIFGLKYY--STLYNFG 474 (492)
Q Consensus 434 ------------~~l~~~~~liG~~~G~~~~~~P~i~se~FG~k~~--g~nyg~~ 474 (492)
..+.++..+..++......-+.++++|.+..++- +.-+++.
T Consensus 103 ~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~ 157 (477)
T TIGR01301 103 DNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYF 157 (477)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHH
Confidence 0112233344568888888899999999987643 3444543
No 219
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=93.93 E-value=0.083 Score=56.69 Aligned_cols=122 Identities=11% Similarity=0.117 Sum_probs=72.1
Q ss_pred hCCChhhhhHH-HHHhhhhccccccceeeeccC-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhcc
Q 039263 59 LGYDQSTLNLL-SFSKDVGGNVGVLSGLINEIT-PPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANS 136 (492)
Q Consensus 59 ~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~-Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g 136 (492)
+|+||++..-+ +.....-=...+++|++.||+ |.|.++.+|+++..+|+.++... +. . .+..++.....+ ++|
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~--~~-~-~~~gl~i~L~~I-~iG 130 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAIS--SV-S-GPGGLYIGLALI-IVG 130 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcc--cc-c-cccHHHHHHHHH-Hhc
Confidence 56999886654 443333333588999999996 99999999999999999876533 21 1 112222222333 377
Q ss_pred ccchhhhhhhhhhhhcCC--CCCceeeeh--hHhhhhhHHHHHHHHHHHcCCChh
Q 039263 137 QSFANTGALVTCVKNFPE--SRGSVLGLL--KGFVGLSGAILTQLYHAFYGDNSK 187 (492)
Q Consensus 137 ~~~~~~a~l~t~~k~FP~--~RG~a~Gi~--~a~~GLsa~i~s~i~~~~f~~~~~ 187 (492)
.|.+=+..-.-.-+-+|+ .| +-.|.. -...=+| ++++++...++.++..
T Consensus 131 ~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiG-sl~~p~i~~~~~~~~g 183 (498)
T COG3104 131 TGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIG-SLIAPIITGLLAINYG 183 (498)
T ss_pred cccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehH-HHHHHHHHHHHHHhhC
Confidence 777655444445577863 23 333332 1111233 5566666666655443
No 220
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=93.83 E-value=0.086 Score=56.79 Aligned_cols=113 Identities=12% Similarity=0.140 Sum_probs=84.0
Q ss_pred HHHhhcCCCCCc-cchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhc-CCchhHHHHHH
Q 039263 365 QIGSSLGYPARS-TTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYG-IPNSLYAASVI 442 (492)
Q Consensus 365 ~I~~slg~~~~~-~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~-~~~~l~~~~~l 442 (492)
++.+.+|.++.+ .+...+.+.+.-.+.-+.+|+++||++-| +. +.+..+.-.+..+++.+. ....+.+.=++
T Consensus 51 ~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~v-L~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~l 124 (511)
T TIGR00806 51 YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PV-LVLQALSFVCVWLLLLLGTSVWHMQLMEVF 124 (511)
T ss_pred HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455577888887 77888999999999999999999999744 33 333333333333333232 23456777778
Q ss_pred HHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHHH
Q 039263 443 IGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAYI 484 (492)
Q Consensus 443 iG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~l 484 (492)
.|++-|+.+ .+-..+..+|-.|+.++-.++...+..+|..+
T Consensus 125 lGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~I 165 (511)
T TIGR00806 125 YSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFL 165 (511)
T ss_pred HHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999 99999999999999999888877776666554
No 221
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.80 E-value=0.032 Score=61.25 Aligned_cols=73 Identities=21% Similarity=0.281 Sum_probs=0.0
Q ss_pred HHHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhccc-cccceeeeccC-CcHHHHHHHHHHHHHHHHHHH
Q 039263 36 LLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNV-GVLSGLINEIT-PPWVVLAIGSIMNFFGYFMIW 111 (492)
Q Consensus 36 ~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~-~~~~G~~~D~~-Gpr~~~~iG~vl~~~Gy~~~~ 111 (492)
.++| ..-..|.=+.-+ .+++||+++.+|...|..+.+++..+ .++..++-+|. -||++ .+|+++.++|.+++.
T Consensus 12 ~~~q-~~~~g~~~~~lt-tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi-g~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 12 GLFQ-MMVSGYVNSSLT-TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI-GIGALLMGLGSLLFA 86 (539)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred HHHH-HHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee-eecHHHHHHHHHHHh
Confidence 3445 334446555555 89999999999999999999999875 66777777764 45554 669999999976543
No 222
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=92.14 E-value=0.087 Score=55.79 Aligned_cols=99 Identities=12% Similarity=0.080 Sum_probs=69.9
Q ss_pred ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCC-CC
Q 039263 79 VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPES-RG 157 (492)
Q Consensus 79 ~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG 157 (492)
++.+..++.+|.|||..++++++...+=+.+ .+..++ .|.+...-.+-+.-.+..-.++++-..++||+| ..
T Consensus 275 ~m~~~p~li~rig~k~~Lllag~i~~iRi~~-----~~~~~~--~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsA 347 (412)
T PF01306_consen 275 MMFFSPWLINRIGAKNLLLLAGVIMAIRIIG-----SGFATN--PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSA 347 (412)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-----HHT--S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHH
T ss_pred HHHHHHHHHHhcChHhHHHHHHHHHHHHHHH-----Hhhhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHH
Confidence 5789999999999999999999877665533 344444 455666777888888888899999999999976 23
Q ss_pred ceeeeh-hHhhhhhHHHHHHHHHHHcCC
Q 039263 158 SVLGLL-KGFVGLSGAILTQLYHAFYGD 184 (492)
Q Consensus 158 ~a~Gi~-~a~~GLsa~i~s~i~~~~f~~ 184 (492)
++-.+. .-..|+|..+++.+....++.
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~ 375 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDR 375 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhh
Confidence 444332 345577888888777666653
No 223
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=92.12 E-value=0.39 Score=51.79 Aligned_cols=162 Identities=20% Similarity=0.296 Sum_probs=101.9
Q ss_pred CCCcchhhccccccccccchHHHHHHHHHHHH-hhCc-c-cccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccce
Q 039263 9 SCCSLREMKSSSLVGVLTGRWFMVFASLLIMA-VAGA-T-YMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSG 84 (492)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~Rw~~l~a~~~i~l-~~Gt-~-Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G 84 (492)
++-.-...+++...+..++++.....+.++-+ -.|- . .. - -.+|.+++|++.+.+.+ ++...++.....+..
T Consensus 223 ~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~-~---~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~ 298 (463)
T KOG2816|consen 223 SSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVL-L---LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLL 298 (463)
T ss_pred chhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEE-E---EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445555544556667765555555533 3221 1 11 1 13678899999999864 666655555444444
Q ss_pred -eeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhh-cCCCCCceeee
Q 039263 85 -LINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKN-FPESRGSVLGL 162 (492)
Q Consensus 85 -~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~-FP~~RG~a~Gi 162 (492)
.+.-.+|-|.++.+|...-.++..++... .. .|+++...++...+ +...++.-.-..|+ .||+||++-++
T Consensus 299 ~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-----~~--~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e~g~v~~~ 370 (463)
T KOG2816|consen 299 PLLSSILGEKRLISLGLLSEFLQLLLFAFA-----TE--TWMMFAAGVVVALA-GIVFPAIRAFASILVSPEEQGKVFGI 370 (463)
T ss_pred HHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-----cc--chhhhHHHHHHHhh-cchhHHHHhHHHhhcccccccchhhH
Confidence 66677788888899999888886544422 22 47776666665543 34444444444444 58999999999
Q ss_pred hhHhhhhhHHHHHHHHHHHc
Q 039263 163 LKGFVGLSGAILTQLYHAFY 182 (492)
Q Consensus 163 ~~a~~GLsa~i~s~i~~~~f 182 (492)
....-+|++.+.+.+|+..+
T Consensus 371 is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 371 ISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HHHHHHHhhhhhHHHHHHHH
Confidence 98888888887777777655
No 224
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=91.88 E-value=0.012 Score=62.21 Aligned_cols=101 Identities=22% Similarity=0.226 Sum_probs=77.8
Q ss_pred ccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC----CchhHHHHHHHHhhhcchh
Q 039263 376 STTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI----PNSLYAASVIIGFCFGAQW 451 (492)
Q Consensus 376 ~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~----~~~l~~~~~liG~~~G~~~ 451 (492)
..+...+...++..+|-++.|+++||++||+ .+.+..+++.++.++..+.+ ...+.++-.+.|++.|+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKP------ALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 3456678889999999999999999997764 44455556666665544443 4466777789999999999
Q ss_pred hhHHHHHHHhhcCCCcccccccceehhhHHH
Q 039263 452 PLLFAIISEIFGLKYYSTLYNFGAVASPVGA 482 (492)
Q Consensus 452 ~~~P~i~se~FG~k~~g~nyg~~~la~~~gs 482 (492)
.+.|..+.|.=..||=|..-.+..++..+|.
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~ 151 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGI 151 (451)
T ss_pred ccccccccccccccccccccccccccccccc
Confidence 9999999999988888877777666655553
No 225
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=91.87 E-value=0.48 Score=51.78 Aligned_cols=138 Identities=13% Similarity=0.058 Sum_probs=85.3
Q ss_pred HHHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHh
Q 039263 37 LIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVT 115 (492)
Q Consensus 37 ~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~ 115 (492)
...+..-..+...+|-++..+.+++++.|.+.+.....+... .=+..|.+.|+.+++...+--..+...|...+++...
T Consensus 306 ~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~ 385 (509)
T KOG2504|consen 306 SNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA 385 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 333344446777888888889999999999996444444444 4688999999988444333233333455555554443
Q ss_pred cCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHH
Q 039263 116 GRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYH 179 (492)
Q Consensus 116 g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~ 179 (492)
. .++.++.+.++-|...|.+..-.-.+..+..+ +|=..+-|++.-+-|+++.+-.++..
T Consensus 386 ~-----~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 386 T-----TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred c-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 2 25677777777777666654333335666665 44466777766666665555444433
No 226
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=91.78 E-value=0.51 Score=49.35 Aligned_cols=132 Identities=15% Similarity=0.184 Sum_probs=80.7
Q ss_pred hCcccccccccH-HHHHhhCCChhhhhHHHHHhhhhccc-------cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHH
Q 039263 42 AGATYMFGLYSS-DIKTSLGYDQSTLNLLSFSKDVGGNV-------GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLA 113 (492)
Q Consensus 42 ~Gt~Y~fS~ys~-~L~~~~~~sq~~l~~is~~~~vg~~~-------~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~ 113 (492)
.+..|.|..+.- ++.+..+-++.+.. ..++.+|+.+ .+..|.+.||+|+|+++++|.+...+-| ..|.+
T Consensus 41 ~~~L~~~~~~~V~~F~~a~~~~~~~~~--~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~-ll~~~ 117 (451)
T KOG2615|consen 41 VSSLYPFVVFMVRDFNIAIGEPDGASV--FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSY-LLWAL 117 (451)
T ss_pred ccchhHHHHHhhHHHHHhhCCcccccc--hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHH-HHHHH
Confidence 478888887643 34444444443232 3334444443 5689999999999999999999888855 55544
Q ss_pred HhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCCceeeehhHhhhhhHHHHHHHHHHHcCC
Q 039263 114 VTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRGSVLGLLKGFVGLSGAILTQLYHAFYGD 184 (492)
Q Consensus 114 ~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG~a~Gi~~a~~GLsa~i~s~i~~~~f~~ 184 (492)
-.+ ...+.+-=+++|+..|-... +-.-...-++ ++|+++.+..-..+|+| +|..+...+++..
T Consensus 118 S~~------F~afv~aR~l~Gi~kgnl~v-~rAiisdV~sek~r~l~ms~v~~a~~lG-filGPmIGgyla~ 181 (451)
T KOG2615|consen 118 SRN------FAAFVLARFLGGIFKGNLSV-IRAIISDVVSEKYRPLGMSLVGTAFGLG-FILGPMIGGYLAQ 181 (451)
T ss_pred HHH------HHHHHHHHHhhhhccCchHH-HHHHHHhhcChhhccceeeeeehhhhcc-hhhcchhhhHHHh
Confidence 222 21122223456655554321 2233446675 57999999998888885 5666666665543
No 227
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=91.34 E-value=0.72 Score=43.71 Aligned_cols=111 Identities=17% Similarity=0.144 Sum_probs=67.2
Q ss_pred cccHHHHHhhCCCh--hhhhHHHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHH
Q 039263 50 LYSSDIKTSLGYDQ--STLNLLSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQM 126 (492)
Q Consensus 50 ~ys~~L~~~~~~sq--~~l~~is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l 126 (492)
...+.+.++++.+. .+.+.+.....++... .++.|.+.||+|+|....++......+..... . ... ...+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~~ 97 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLA-L-APN---VGLALL 97 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHH-h-Ccc---chHHHH
Confidence 34444555555554 3455554444445444 48999999999999777767665344422211 1 111 123444
Q ss_pred HHHHHHhhccccchhhhhhhhhhhhcCC--CCCceeeehhH
Q 039263 127 CLYICIGANSQSFANTGALVTCVKNFPE--SRGSVLGLLKG 165 (492)
Q Consensus 127 ~~~~~l~g~g~~~~~~a~l~t~~k~FP~--~RG~a~Gi~~a 165 (492)
.....+.|.+.+..+.+......+++|+ +|+...++...
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 4444446777777777888888899996 67777776554
No 228
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=90.90 E-value=0.099 Score=55.63 Aligned_cols=114 Identities=10% Similarity=0.085 Sum_probs=83.4
Q ss_pred hHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC-CchhHHHHHH
Q 039263 364 GQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI-PNSLYAASVI 442 (492)
Q Consensus 364 ~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~-~~~l~~~~~l 442 (492)
..+.+..+.++....++-..+.+.-.+.-.+.|++.||.- |.+.+.+...+-.++.+...+.. -..+.++=.+
T Consensus 57 ~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryN------R~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~ 130 (493)
T KOG1330|consen 57 KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYN------RKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGF 130 (493)
T ss_pred HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcC------cceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566778888888889999999999999999999994 44444444433333333322221 1134566678
Q ss_pred HHhhhcchhhhHHHHHHHhhcCCCcccccccceehhhHHHH
Q 039263 443 IGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGAY 483 (492)
Q Consensus 443 iG~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs~ 483 (492)
+|++-.....+.|++++|.|=..+=|.-+++..++.++|+.
T Consensus 131 vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsg 171 (493)
T KOG1330|consen 131 VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSG 171 (493)
T ss_pred hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccc
Confidence 89999999999999999999877888888888888888754
No 229
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=90.47 E-value=0.69 Score=49.47 Aligned_cols=140 Identities=14% Similarity=0.082 Sum_probs=87.6
Q ss_pred cccchH--HHHHHHHHHHHhhCc-ccccccccHHHHHhhCCChhhhhH-----HHH----Hhhhhccc-cccceeeeccC
Q 039263 24 VLTGRW--FMVFASLLIMAVAGA-TYMFGLYSSDIKTSLGYDQSTLNL-----LSF----SKDVGGNV-GVLSGLINEIT 90 (492)
Q Consensus 24 ~~~~Rw--~~l~a~~~i~l~~Gt-~Y~fS~ys~~L~~~~~~sq~~l~~-----is~----~~~vg~~~-~~~~G~~~D~~ 90 (492)
....|| .-|.+....-+..-. .|..++|++.+-+..++..++-.. ++. ...++... -++...+.|+.
T Consensus 296 ~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i 375 (538)
T KOG0252|consen 296 RLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII 375 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh
Confidence 345566 455555555444444 699999999999999988764322 111 11222222 35778999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchh-HHHHHHHHHhhccccchhhhhhhhhhhhcCCC-CCceeeehhHh
Q 039263 91 PPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQV-WQMCLYICIGANSQSFANTGALVTCVKNFPES-RGSVLGLLKGF 166 (492)
Q Consensus 91 Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~-~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a~Gi~~a~ 166 (492)
|++.+.+-|-+++.+=++.+...+......... ..+.+...++++|= ++.+.....+.||.+ ||+.=||..+.
T Consensus 376 GRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP---n~ttfivpaE~FParvR~t~hGIsAA~ 450 (538)
T KOG0252|consen 376 GRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP---NATTFIVPAEIFPARVRSTCHGISAAS 450 (538)
T ss_pred hhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC---CceeEEeehhhchHHHhhhhhhHHHHh
Confidence 999999988887766655544444433321111 12223445556553 346677788999965 99999986554
No 230
>PRK09669 putative symporter YagG; Provisional
Probab=90.35 E-value=0.39 Score=50.89 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=60.6
Q ss_pred hhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcC---C---chhHHHHH
Q 039263 368 SSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGI---P---NSLYAASV 441 (492)
Q Consensus 368 ~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~---~---~~l~~~~~ 441 (492)
+.+|.+....++..++..++.++.=.++|++|||..+|++-.|+|.+..+........+++..+. . ..+++..+
T Consensus 38 ~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~ 117 (444)
T PRK09669 38 DVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYI 117 (444)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 34677777888889999999999999999999999888877788876432222222212222211 1 12233344
Q ss_pred HHHhhhcchhhhHHHHHHHhh
Q 039263 442 IIGFCFGAQWPLLFAIISEIF 462 (492)
Q Consensus 442 liG~~~G~~~~~~P~i~se~F 462 (492)
+.+.+|.....-+-++.+|+.
T Consensus 118 l~~~~~t~~~ip~~al~~~~t 138 (444)
T PRK09669 118 LLSLVYTAINVPYCAMPGAIT 138 (444)
T ss_pred HHHHHHHhhcchHHHhHHHhc
Confidence 556666665555556666655
No 231
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=90.34 E-value=0.42 Score=50.48 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=82.6
Q ss_pred HHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCc-hhHHHHHHH
Q 039263 365 QIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPN-SLYAASVII 443 (492)
Q Consensus 365 ~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~-~l~~~~~li 443 (492)
.+.++.+++.++.+..-|.++|.=+++.+++|.+|||..-|+ ++.+.+++..+..+++-+.+.. .+.+.-.+.
T Consensus 54 ~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~------fm~~gLilsai~nil~Gfs~s~~~~~~l~~ln 127 (448)
T COG2271 54 ALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY------FMAFGLILSAIVNILFGFSPSLFLFAVLWVLN 127 (448)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce------eehHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 344556788888889999999999999999999999884332 5566667777776665444422 445666677
Q ss_pred HhhhcchhhhHHHHHHHhhcCCCcccccccceeh
Q 039263 444 GFCFGAQWPLLFAIISEIFGLKYYSTLYNFGAVA 477 (492)
Q Consensus 444 G~~~G~~~~~~P~i~se~FG~k~~g~nyg~~~la 477 (492)
|+.=|.-|+-.-.++..+|..|.=|+-|++-.++
T Consensus 128 g~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~s 161 (448)
T COG2271 128 GWFQGMGWPPCARTITHWFSRKERGTWWSIWNTS 161 (448)
T ss_pred HHHhcCCCcHHHHHHHHHcCccccCceEEEehhh
Confidence 9999999999999999999999888888776544
No 232
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=89.01 E-value=0.74 Score=50.07 Aligned_cols=112 Identities=15% Similarity=0.211 Sum_probs=77.1
Q ss_pred hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHH-HHHHHHHHHHHHHhcCCchhHHHHHHHHhhh
Q 039263 369 SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTF-VLLFSCVGHPFIAYGIPNSLYAASVIIGFCF 447 (492)
Q Consensus 369 slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i-~~~l~~~~~ll~~~~~~~~l~~~~~liG~~~ 447 (492)
.+++...+-+...+++.++-.+|.+.+|++.||+ |-...+.. ..+-.+.+.+-........+.+.=.+.|++-
T Consensus 75 dl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~------~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 75 DLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF------PLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC------ChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3444445557788999999999999999999999 42222211 1111111111112233445566677889999
Q ss_pred cchhhhHHHHHHHhhcCCCcccccccce----ehhhHHHHHHh
Q 039263 448 GAQWPLLFAIISEIFGLKYYSTLYNFGA----VASPVGAYILN 486 (492)
Q Consensus 448 G~~~~~~P~i~se~FG~k~~g~nyg~~~----la~~~gs~l~~ 486 (492)
++.|.-...+++-+|+.++.|.-.++.. +++..|+++=.
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~ 191 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAY 191 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHH
Confidence 9999999999999999999999999987 55566555533
No 233
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.57 E-value=0.83 Score=46.10 Aligned_cols=135 Identities=16% Similarity=0.141 Sum_probs=74.8
Q ss_pred cchHHHHHHHHHHHHhhCcccccccccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHH
Q 039263 26 TGRWFMVFASLLIMAVAGATYMFGLYSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNF 104 (492)
Q Consensus 26 ~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~ 104 (492)
..-|...+.++.--...=..|+ +=..-.++|+|+|..+.++| ++.-.+.....+.-|.+.||+|.+......+....
T Consensus 264 ppfw~~~iicv~yyva~fPFi~--lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFIT--LGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILT 341 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhh--hhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHH
Confidence 4556666665554433222221 11234678999999988887 77666666778889999999999887755554444
Q ss_pred H-HHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhh-hhhhh-hhcCCC-CCceeeehhHhhhhhHHH
Q 039263 105 F-GYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGA-LVTCV-KNFPES-RGSVLGLLKGFVGLSGAI 173 (492)
Q Consensus 105 ~-Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~-l~t~~-k~FP~~-RG~a~Gi~~a~~GLsa~i 173 (492)
+ |-.+.. ++- - .|+--++ +.|.+ +.-.|| +=.++ .-=|++ -|++-|...+---|+=++
T Consensus 342 l~~H~~l~--Ft~--l-sPy~~m~----~lGLs--ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~ 403 (459)
T KOG4686|consen 342 LLGHSGLF--FTF--L-SPYTSMT----FLGLS--YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAF 403 (459)
T ss_pred HHHhhhHH--hhh--c-cHHHHHH----HHhhh--HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhH
Confidence 4 322222 111 1 1222222 23332 222233 22222 223764 698888777666554333
No 234
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=88.14 E-value=1.3 Score=46.00 Aligned_cols=104 Identities=20% Similarity=0.203 Sum_probs=67.1
Q ss_pred hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCchhHHHHHH
Q 039263 363 LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSLYAASVI 442 (492)
Q Consensus 363 ~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~l 442 (492)
+.+|-+++|.+.+.++++.++==++=+..- .+.-++.||++..|..+ ...++.+++.++=.......++.++.+
T Consensus 35 L~~Ir~~~gls~s~aGlLTtLPll~fg~~a----p~a~~Lar~~g~er~l~--~~Llli~~G~~iR~~~~~~~L~~gt~l 108 (395)
T COG2807 35 LDEIRQDLGLSFSVAGLLTTLPLLAFGLFA----PAAPRLARRFGEERSLF--LALLLIAAGILIRSLGGLPLLFLGTLL 108 (395)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHhhHHHHH--HHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 344555667766666655444333222222 23456666665555554 455666666654323345578999999
Q ss_pred HHhhhcchhhhHHHHHHHhhcCCCccccccc
Q 039263 443 IGFCFGAQWPLLFAIISEIFGLKYYSTLYNF 473 (492)
Q Consensus 443 iG~~~G~~~~~~P~i~se~FG~k~~g~nyg~ 473 (492)
+|.+-+..-.+.|+++.+.|+ |+.+..=|.
T Consensus 109 ~G~gIav~nVLLPslIK~~Fp-k~~~~mtgl 138 (395)
T COG2807 109 AGAGIAVINVLLPSLIKRDFP-KRVGLMTGL 138 (395)
T ss_pred HHhhHHHHHHhhhHHHHhhcc-cchhhHHhH
Confidence 999999999999999999997 777765555
No 235
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=86.79 E-value=6.7 Score=42.34 Aligned_cols=84 Identities=15% Similarity=0.170 Sum_probs=57.8
Q ss_pred hCCChhhhhH--HHHHhhhhccc-cccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhc
Q 039263 59 LGYDQSTLNL--LSFSKDVGGNV-GVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGAN 135 (492)
Q Consensus 59 ~~~sq~~l~~--is~~~~vg~~~-~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~ 135 (492)
+++++.|+.. .......+... .++.-++.+|+|+|.+..+|.++..+++.++|..- ..++++..++.++.+.
T Consensus 265 y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~-----~~~~~l~~~~~~i~~~ 339 (467)
T COG2211 265 YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP-----AGSVVLIVVALIIAGV 339 (467)
T ss_pred EEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc-----CcchHHHHHHHHHHHH
Confidence 4445544433 34444444444 56788999999999999999999999999988663 2335656667778888
Q ss_pred cccchhhhhhhhhh
Q 039263 136 SQSFANTGALVTCV 149 (492)
Q Consensus 136 g~~~~~~a~l~t~~ 149 (492)
|.+..+. +..++
T Consensus 340 g~~~~~~--l~wam 351 (467)
T COG2211 340 GTGIANP--LPWAM 351 (467)
T ss_pred Hhhcccc--ccHHH
Confidence 7777654 55544
No 236
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=85.59 E-value=1.3 Score=49.96 Aligned_cols=62 Identities=15% Similarity=0.092 Sum_probs=49.4
Q ss_pred ccHHHHHhhCCChhhhhHH-HHHhhhhccccccceeeeccC-CcHHHHHHHHHHHHHHHHHHHH
Q 039263 51 YSSDIKTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEIT-PPWVVLAIGSIMNFFGYFMIWL 112 (492)
Q Consensus 51 ys~~L~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~-Gpr~~~~iG~vl~~~Gy~~~~~ 112 (492)
+..-+.+.+|+++++...+ .....+.-.+.+++|.+.|++ |++.++++|.++..+|+.++..
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF 73 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 3445666799999987776 555555555699999999996 9999999999999999977654
No 237
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=83.91 E-value=4.9 Score=39.72 Aligned_cols=75 Identities=19% Similarity=0.227 Sum_probs=51.6
Q ss_pred HHHHhhccceeEEecc--hhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHH
Q 039263 347 IATTCGVGGTLTAIDN--LGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVG 424 (492)
Q Consensus 347 ~~~~~~~g~Gl~~i~n--~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~ 424 (492)
..+.+...+|..|... ..|+-+++++++++.++.-..-.++..+| +.+|.+.|+. |-...+.+..+...++
T Consensus 7 a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~------gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 7 ASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF------GPWVVLLIGAVLGFVG 79 (250)
T ss_pred HHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc------chHHHHHHHHHHHHHH
Confidence 3555566677777665 56777788998776666666667777777 8889999988 3334456667777777
Q ss_pred HHHH
Q 039263 425 HPFI 428 (492)
Q Consensus 425 ~ll~ 428 (492)
..+.
T Consensus 80 Y~~~ 83 (250)
T PF06813_consen 80 YGLL 83 (250)
T ss_pred HHHH
Confidence 7553
No 238
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=83.16 E-value=2.2 Score=48.15 Aligned_cols=92 Identities=16% Similarity=0.264 Sum_probs=69.6
Q ss_pred hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCC---------chhHHH
Q 039263 369 SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIP---------NSLYAA 439 (492)
Q Consensus 369 slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~---------~~l~~~ 439 (492)
.+++++.+++..+..+.-...+--++.|++.|+.. +|.+++.+..++..+++.+++.... ..++++
T Consensus 17 ~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~l-----G~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 17 FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWL-----GKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 36776666666677777777788888999999774 5556777777788888876654321 126678
Q ss_pred HHHHHhhhcchhhhHHHHHHHhhcCC
Q 039263 440 SVIIGFCFGAQWPLLFAIISEIFGLK 465 (492)
Q Consensus 440 ~~liG~~~G~~~~~~P~i~se~FG~k 465 (492)
.+++.++-|++=+-+.+...|-|..+
T Consensus 92 LaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 92 LALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHhhccccccCchhhhHhhcCcc
Confidence 88899999999999999999999754
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=82.13 E-value=0.54 Score=37.66 Aligned_cols=43 Identities=14% Similarity=0.205 Sum_probs=36.5
Q ss_pred hHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhc
Q 039263 364 GQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKY 406 (492)
Q Consensus 364 ~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~ 406 (492)
.-..+++|++..+.++..++..+...++..+||.+.||..|++
T Consensus 24 ~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 24 PLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred hHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 3444568898888899999999999999999999999997653
No 240
>PRK11462 putative transporter; Provisional
Probab=81.68 E-value=2.3 Score=45.62 Aligned_cols=49 Identities=14% Similarity=0.187 Sum_probs=40.6
Q ss_pred hcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHH
Q 039263 369 SLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFV 417 (492)
Q Consensus 369 slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~ 417 (492)
-+|.+...+++...+--++.++-=.+.|++|||..+|++-.|+|.+..+
T Consensus 39 ~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~ 87 (460)
T PRK11462 39 IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGA 87 (460)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHH
Confidence 3466766777778888899999999999999999988888899987543
No 241
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=81.49 E-value=4.4 Score=38.25 Aligned_cols=95 Identities=17% Similarity=0.168 Sum_probs=61.3
Q ss_pred ccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCC---chhHHHHHHHHhhhcchhh
Q 039263 376 STTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIP---NSLYAASVIIGFCFGAQWP 452 (492)
Q Consensus 376 ~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~---~~l~~~~~liG~~~G~~~~ 452 (492)
..+...+...+....+.+.+|.++|+.+|| |. +.+......++.++...... ..+.+...+.|++.|....
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRR----KV--LIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccch----HH--HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHH
Confidence 356677888899999999999999998554 22 22222212222222222222 2344555557999999999
Q ss_pred hHHHHHHHhhcC-CCccccccccee
Q 039263 453 LLFAIISEIFGL-KYYSTLYNFGAV 476 (492)
Q Consensus 453 ~~P~i~se~FG~-k~~g~nyg~~~l 476 (492)
...++++|.+.. ++.+...+....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHH
Confidence 999999999976 455655555444
No 242
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.20 E-value=7 Score=42.12 Aligned_cols=150 Identities=16% Similarity=0.289 Sum_probs=101.5
Q ss_pred ccchHHHHHHHHHHHHhhCcccccccccHHHHHh--hCCChhhhhHH-HHHhhhhccc-cccceee---eccCCcHHHHH
Q 039263 25 LTGRWFMVFASLLIMAVAGATYMFGLYSSDIKTS--LGYDQSTLNLL-SFSKDVGGNV-GVLSGLI---NEITPPWVVLA 97 (492)
Q Consensus 25 ~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys~~L~~~--~~~sq~~l~~i-s~~~~vg~~~-~~~~G~~---~D~~Gpr~~~~ 97 (492)
..+|++.++.=...-...-+.|=.++|-..+.-. .+.+...+-.+ +....+|.+. |.+.+.+ .+++|.+++..
T Consensus 237 ~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 237 LKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred hcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 3455555554444444455567778888888765 33333333333 5555555554 4544444 45679999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC-----Cc------hhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHh
Q 039263 98 IGSIMNFFGYFMIWLAVTGRIP-----KP------QVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGF 166 (492)
Q Consensus 98 iG~vl~~~Gy~~~~~~~~g~i~-----~~------~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~ 166 (492)
+|.+++.+++.+..+.+-...+ .. .+.+....+.+.|.|.+..++...+.+..-+||+|-.+-.+.+-+
T Consensus 317 ~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfy 396 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFY 396 (461)
T ss_pred HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 9999999999888877655432 11 122233456778999999999999999999999999999888888
Q ss_pred hhhhHHHH
Q 039263 167 VGLSGAIL 174 (492)
Q Consensus 167 ~GLsa~i~ 174 (492)
.+.++.+.
T Consensus 397 q~~~s~v~ 404 (461)
T KOG3098|consen 397 QSVASCVA 404 (461)
T ss_pred HHHHHHHH
Confidence 87776553
No 243
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=80.95 E-value=3.7 Score=43.38 Aligned_cols=108 Identities=13% Similarity=0.133 Sum_probs=83.9
Q ss_pred CCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHhhhcchh
Q 039263 373 PARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIP-NSLYAASVIIGFCFGAQW 451 (492)
Q Consensus 373 ~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~-~~l~~~~~liG~~~G~~~ 451 (492)
.+.+.+++-+...+.+.+--...|.+.||++ +..-+++.+.+|..+..++++... ..++++=++=|++....+
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iG------y~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIG------YKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhc------cccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 3455677788899999999999999999995 445677888899998888887653 356777778899999999
Q ss_pred hhHHHHHHHhhcCCCc-c----ccccc----ceehhhHHHHHHh
Q 039263 452 PLLFAIISEIFGLKYY-S----TLYNF----GAVASPVGAYILN 486 (492)
Q Consensus 452 ~~~P~i~se~FG~k~~-g----~nyg~----~~la~~~gs~l~~ 486 (492)
..--++.+|.|..+|- | ..-|+ ..++||.|+++..
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe 221 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE 221 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh
Confidence 9999999999986662 3 33344 3567888887754
No 244
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=80.20 E-value=59 Score=35.18 Aligned_cols=111 Identities=19% Similarity=0.250 Sum_probs=72.4
Q ss_pred CCCCCccchhhhHHHhhhhhhhcccc-hhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhcc
Q 039263 371 GYPARSTTTFVSLVSIWNYLGRVVAG-FASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSLYAASVIIGFCFGA 449 (492)
Q Consensus 371 g~~~~~~~~~Vsl~Si~N~~GRl~~G-~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~liG~~~G~ 449 (492)
+.++.+.+.+.++.++.+..+-++.. .++-.++.| + ...+.+....+..+++++............+..--+.
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~----~--~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~ 346 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK----R--LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGI 346 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----h--HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcc
Confidence 55556666777888888888766666 555555432 2 5556667777777777777766664444444444455
Q ss_pred hhhhHHHHHHHhhcCCCcccccccc----eehhhHHHHHHhh
Q 039263 450 QWPLLFAIISEIFGLKYYSTLYNFG----AVASPVGAYILNV 487 (492)
Q Consensus 450 ~~~~~P~i~se~FG~k~~g~nyg~~----~la~~~gs~l~~~ 487 (492)
....+-++++-+=+.+..|++++++ .+++.+++.+++.
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~ 388 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGN 388 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHH
Confidence 5666666777777788899988886 4456666666554
No 245
>PF12832 MFS_1_like: MFS_1 like family
Probab=79.05 E-value=1.3 Score=35.44 Aligned_cols=51 Identities=22% Similarity=0.266 Sum_probs=37.6
Q ss_pred ccHHHHHhhCCChhhhhHHHHHhhhhcc-ccccceeeeccCCcHHHHHHHHHH
Q 039263 51 YSSDIKTSLGYDQSTLNLLSFSKDVGGN-VGVLSGLINEITPPWVVLAIGSIM 102 (492)
Q Consensus 51 ys~~L~~~~~~sq~~l~~is~~~~vg~~-~~~~~G~~~D~~Gpr~~~~iG~vl 102 (492)
++-.+| +.|+|..|+..+.....+-.. ..++.|.+.||++.+...+.++.+
T Consensus 23 l~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 23 LPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 334444 589999999998554444444 578999999999988877766654
No 246
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=78.76 E-value=2.6 Score=44.26 Aligned_cols=88 Identities=18% Similarity=0.130 Sum_probs=53.2
Q ss_pred ccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCC-CCce
Q 039263 81 VLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPES-RGSV 159 (492)
Q Consensus 81 ~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~-RG~a 159 (492)
++.|.++||+|+|.+...--+++++=-+....+.+..+ ..+| ++..-. =+..+++++.+..-.-||.+ |++.
T Consensus 399 LIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~--~tvl-lf~ara----fisg~fqvaYvYtPEVyPTavRatg 471 (528)
T KOG0253|consen 399 LITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNA--YTVL-LFTARA----FISGAFQVAYVYTPEVYPTAVRATG 471 (528)
T ss_pred hHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcch--hHHH-HHHHHH----HHhchheEEEEecCcccchhhhhcc
Confidence 46789999999999987776655443333333322222 1123 333211 12233455555667889975 9999
Q ss_pred eeehhHhhhhhHHHHH
Q 039263 160 LGLLKGFVGLSGAILT 175 (492)
Q Consensus 160 ~Gi~~a~~GLsa~i~s 175 (492)
+|...+..=.||.+-.
T Consensus 472 vGtcSsmaRIggI~~p 487 (528)
T KOG0253|consen 472 VGTCSSMARIGGIFSP 487 (528)
T ss_pred hhhhhhHHhhhhhhhh
Confidence 9998887766554443
No 247
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=78.49 E-value=19 Score=38.09 Aligned_cols=102 Identities=15% Similarity=0.225 Sum_probs=75.7
Q ss_pred HhhCCChhhhhHHHHHhhhhcccc-ccceeeec-cCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhh
Q 039263 57 TSLGYDQSTLNLLSFSKDVGGNVG-VLSGLINE-ITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGA 134 (492)
Q Consensus 57 ~~~~~sq~~l~~is~~~~vg~~~~-~~~G~~~D-~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g 134 (492)
|-+|.|.+|.+.++-.-..|.+.| ...|++.. |.+|+.+..+|+....++..+ +..++...+ .|.+-.-.++-|
T Consensus 237 ~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~l--ii~a~~~~~--~~~~~~~~~l~G 312 (403)
T PF03209_consen 237 EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFAL--IILAGPLGS--PWLFRPGVFLLG 312 (403)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH--HHHHHhccc--chHHHHHHHHHH
Confidence 358999999888887778888774 46677766 568888888999988888654 345566554 455554456678
Q ss_pred ccccchhhhhhhhhhhhc-CCCCCceeee
Q 039263 135 NSQSFANTGALVTCVKNF-PESRGSVLGL 162 (492)
Q Consensus 135 ~g~~~~~~a~l~t~~k~F-P~~RG~a~Gi 162 (492)
.|.|.+..+++...+.-= |++.|+..|.
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~ 341 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGA 341 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHH
Confidence 899999899988888776 4567877665
No 248
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=78.48 E-value=3.5 Score=37.74 Aligned_cols=82 Identities=11% Similarity=0.039 Sum_probs=56.5
Q ss_pred ccccceeeeccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcC-CCCC
Q 039263 79 VGVLSGLINEITPPWVVLAIGSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFP-ESRG 157 (492)
Q Consensus 79 ~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP-~~RG 157 (492)
..+++..+.++.|||.++++|++... ++-+.+ ..+ ..|.+....++.|.|.+...++--....++-. ++|+
T Consensus 53 s~l~~P~iv~~lg~K~sm~lg~~~y~----~y~~~~--~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~ 124 (156)
T PF05978_consen 53 SCLFAPSIVNKLGPKWSMILGSLGYA----IYIASF--FYP--NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIG 124 (156)
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHH----HHHHHH--Hhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHh
Confidence 35667788999999999999988554 222221 112 23556667788899999888887777677665 4588
Q ss_pred ceeeehhHhhh
Q 039263 158 SVLGLLKGFVG 168 (492)
Q Consensus 158 ~a~Gi~~a~~G 168 (492)
+-.|+-.+.+-
T Consensus 125 ~~~~ifw~i~~ 135 (156)
T PF05978_consen 125 RNTGIFWAIFQ 135 (156)
T ss_pred hHHHHHHHHHH
Confidence 87777655554
No 249
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=70.41 E-value=1.2e+02 Score=32.57 Aligned_cols=20 Identities=20% Similarity=0.459 Sum_probs=15.1
Q ss_pred chhhhHHHhhhhhhhcccch
Q 039263 378 TTFVSLVSIWNYLGRVVAGF 397 (492)
Q Consensus 378 ~~~Vsl~Si~N~~GRl~~G~ 397 (492)
.+...++.++-.+||....+
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~ 329 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSK 329 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhe
Confidence 45668888888999996643
No 250
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=69.68 E-value=7.3 Score=31.93 Aligned_cols=66 Identities=15% Similarity=0.228 Sum_probs=51.6
Q ss_pred ccccccccHHHHHhhCCChhhhhHHHHHhhhhcccc-ccceeeeccCCcHHHHHHHHHHHHHHHHHH
Q 039263 45 TYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNVG-VLSGLINEITPPWVVLAIGSIMNFFGYFMI 110 (492)
Q Consensus 45 ~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~~-~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~~~ 110 (492)
-++|.-.=|.++++.++|.+|.+.+.++.-+|=..| +...++.++..++..+.+|.+...+....+
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 467777889999999999999999988877776664 567777888777887887877666665443
No 251
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=65.29 E-value=1.9e+02 Score=30.69 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=46.0
Q ss_pred hhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHH---HHhcCCch-hHHHHHHHHhhhcchhhhH
Q 039263 379 TFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPF---IAYGIPNS-LYAASVIIGFCFGAQWPLL 454 (492)
Q Consensus 379 ~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll---~~~~~~~~-l~~~~~liG~~~G~~~~~~ 454 (492)
.+--++-++.+++|=-.-. .+++|.|.+.+.+.+..+-.++ +.+.+... .++.....|+.=|..+.-.
T Consensus 285 ~Y~~~YQ~GVFISRSS~~~--------~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 285 WYQLLYQLGVFISRSSLPF--------FRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHhhhhcceee--------eehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3445667778888865433 2457788887766665554432 11222223 3445556699888888777
Q ss_pred HHHHHHhh
Q 039263 455 FAIISEIF 462 (492)
Q Consensus 455 P~i~se~F 462 (492)
-..++|.-
T Consensus 357 F~~I~~~~ 364 (402)
T PF02487_consen 357 FYRISEEV 364 (402)
T ss_pred HHHHHhcC
Confidence 77777654
No 252
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=56.77 E-value=9.7 Score=41.18 Aligned_cols=107 Identities=16% Similarity=0.132 Sum_probs=74.5
Q ss_pred cCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHH--Hh-cCCchhHHHHHHHHhh
Q 039263 370 LGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFI--AY-GIPNSLYAASVIIGFC 446 (492)
Q Consensus 370 lg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~--~~-~~~~~l~~~~~liG~~ 446 (492)
...+..+.+...+-+.++-.++-+-.|++.||++-|+ .+....++..++.++. +. .....+.+.=++-|++
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~------v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARR------VFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchH------HHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 3566677777888888899999999999999997543 3333444444444332 11 1122445666677999
Q ss_pred hcchhhhHHHHHHHhhcCCCcccccccceehhhHHH
Q 039263 447 FGAQWPLLFAIISEIFGLKYYSTLYNFGAVASPVGA 482 (492)
Q Consensus 447 ~G~~~~~~P~i~se~FG~k~~g~nyg~~~la~~~gs 482 (492)
+|..|..+..+.+.+.-++.-++-.++++.+.-+|+
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~ 177 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGT 177 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888877777665554443
No 253
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.49 E-value=35 Score=38.93 Aligned_cols=72 Identities=18% Similarity=0.151 Sum_probs=41.9
Q ss_pred ccccccchHHHHHHHHHHHHhhCccccccccc-HHHHHhhCCChhhhhHH-HHHhhhhccc-cccceeeeccCCcH
Q 039263 21 LVGVLTGRWFMVFASLLIMAVAGATYMFGLYS-SDIKTSLGYDQSTLNLL-SFSKDVGGNV-GVLSGLINEITPPW 93 (492)
Q Consensus 21 ~~~~~~~Rw~~l~a~~~i~l~~Gt~Y~fS~ys-~~L~~~~~~sq~~l~~i-s~~~~vg~~~-~~~~G~~~D~~Gpr 93 (492)
+|+...|+-.++..-..+.-... .-.|..|- +-|++||+.++++.+.+ +.....+... .+++|++..|+-++
T Consensus 385 ~~~ll~N~if~~~~l~~~~~~~~-~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 385 IKRLLSNPIFMLVVLASVIESLA-ITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHhcCchHHHHHHHHHHHHHH-HhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 35556666554322222211111 22344444 56778999999999997 3444444444 57899999998433
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=52.80 E-value=38 Score=30.97 Aligned_cols=94 Identities=15% Similarity=0.078 Sum_probs=57.9
Q ss_pred hHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHhhhcchhhhHHHHHHHh
Q 039263 382 SLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLFSCVGHPFIAYGIPNSLYAASVIIGFCFGAQWPLLFAIISEI 461 (492)
Q Consensus 382 sl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~~~P~i~se~ 461 (492)
..+.+.+ ++.+.+-++++. .|.+++..+.-++-...+.......+++++++.|++.+.+|..-...+.+.
T Consensus 48 ~~~~~s~----l~~P~iv~~lg~------K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 48 GSFAISC----LFAPSIVNKLGP------KWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHH----HhHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 4444444 445666677744 356666555444333223333345678999999999999999888777765
Q ss_pred hcCC----CcccccccceehhhHHHHHH
Q 039263 462 FGLK----YYSTLYNFGAVASPVGAYIL 485 (492)
Q Consensus 462 FG~k----~~g~nyg~~~la~~~gs~l~ 485 (492)
-=.+ |.|--|++..++..+|..+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 5444 44455555666666665543
No 255
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=51.80 E-value=77 Score=33.02 Aligned_cols=120 Identities=8% Similarity=0.008 Sum_probs=66.1
Q ss_pred hhHHHHHHHHHhhccceeEEecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHH
Q 039263 340 IDMLIIFIATTCGVGGTLTAIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLL 419 (492)
Q Consensus 340 ~~FWllf~~~~~~~g~Gl~~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~ 419 (492)
.+|...|.....+-...=.|++ ...++.|++..+.+.+-..-=..+.+-..+.|.+.||++||+ .++ +-.+
T Consensus 37 r~yl~vY~La~~aDWLQGpY~Y---~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-----~cl-~~ci 107 (354)
T PF05631_consen 37 RKYLLVYLLAMAADWLQGPYLY---ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK-----ACL-LFCI 107 (354)
T ss_pred HHHHHHHHHHHHHHHhhcchhH---HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH-----HHH-HHHH
Confidence 3455555444333322223444 345567776555543333223334555566788899998764 222 2222
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHhhhcchhhhHHHH-HHHhhcCCCccc
Q 039263 420 FSCVGHPFIAYGIPNSLYAASVIIGFCFGAQWPLLFAI-ISEIFGLKYYST 469 (492)
Q Consensus 420 l~~~~~ll~~~~~~~~l~~~~~liG~~~G~~~~~~P~i-~se~FG~k~~g~ 469 (492)
+-.++++.-.......|+++-++-|++.--+++.|=+- +.|. ..+.+..
T Consensus 108 ly~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh-~~~g~~~ 157 (354)
T PF05631_consen 108 LYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEH-NKRGFPQ 157 (354)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCh
Confidence 33333333334445578899999999999999988764 3443 3344443
No 256
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=50.95 E-value=1.2e+02 Score=32.26 Aligned_cols=153 Identities=18% Similarity=0.170 Sum_probs=82.5
Q ss_pred ccccccchHHHHHHHHHHHHhhCcc-cccccccHHHHHhhCCChhhhhHHHHHhhhhcccc-ccceeeeccCCcHHHHHH
Q 039263 21 LVGVLTGRWFMVFASLLIMAVAGAT-YMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGGNVG-VLSGLINEITPPWVVLAI 98 (492)
Q Consensus 21 ~~~~~~~Rw~~l~a~~~i~l~~Gt~-Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~~~~-~~~G~~~D~~Gpr~~~~i 98 (492)
.+...++|++.+ ....+.+=.|.. =.||..-.-+.|..|++..|.+...+..-++...| +.+-.+..|+-|...+..
T Consensus 229 ~~~l~~~~~~~~-gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf 307 (422)
T COG0738 229 LSSLFQNKHLRL-GVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAF 307 (422)
T ss_pred HHHHHhChHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 344445555432 334455556773 44555555555558888888777644333333333 344456668877776654
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHH
Q 039263 99 GSIMNFFGYFMIWLAVTGRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLY 178 (492)
Q Consensus 99 G~vl~~~Gy~~~~~~~~g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~ 178 (492)
-++ +++.+.. ....+++ .+.++... +.|.-.+..+.....-+.++.|++-...++++. +...||++...+.
T Consensus 308 ~a~---~~ill~~--~~~l~~g--~v~~~~l~-~ig~F~simfPTIfslal~~l~~~ts~~s~~l~-maivGGAiiP~l~ 378 (422)
T COG0738 308 YAL---IAILLLL--AVALIGG--VVALYALF-LIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLV-MAIVGGAIIPPLQ 378 (422)
T ss_pred HHH---HHHHHHH--HHHHhcC--hHHHHHHH-HHHHHhHHHHHHHHHHHHhccCccccccceeee-eheecchHHHHHH
Confidence 432 1221111 1112222 23332222 234446677788888899999966555555543 2236788887776
Q ss_pred HHHcC
Q 039263 179 HAFYG 183 (492)
Q Consensus 179 ~~~f~ 183 (492)
...-+
T Consensus 379 G~i~d 383 (422)
T COG0738 379 GVIAD 383 (422)
T ss_pred HHHHH
Confidence 55544
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=49.23 E-value=43 Score=36.04 Aligned_cols=141 Identities=16% Similarity=0.103 Sum_probs=76.0
Q ss_pred HHHhhCcccccccccHHHHHhhCCChhhhhHHHHHhhhhc-cccccceeeeccCC-cHHHHHHHHHHHHHHHHHHHHHHh
Q 039263 38 IMAVAGATYMFGLYSSDIKTSLGYDQSTLNLLSFSKDVGG-NVGVLSGLINEITP-PWVVLAIGSIMNFFGYFMIWLAVT 115 (492)
Q Consensus 38 i~l~~Gt~Y~fS~ys~~L~~~~~~sq~~l~~is~~~~vg~-~~~~~~G~~~D~~G-pr~~~~iG~vl~~~Gy~~~~~~~~ 115 (492)
-.+..|..|+++..-++.-.--|+++.....++....+++ ..+...|.+.||.. -|.+..+-......+-.+...+..
T Consensus 275 ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~ 354 (480)
T KOG2563|consen 275 YGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL 354 (480)
T ss_pred HhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3455667788888777444556788866677755555554 45889999999974 455555444444444222221212
Q ss_pred cCCCCchhHHHHHHHHHhhccccchhhhhhhhhhhhcCCCCCceeeehhHhhhhhHHHHHHHHHH
Q 039263 116 GRIPKPQVWQMCLYICIGANSQSFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILTQLYHA 180 (492)
Q Consensus 116 g~i~~~~~~~l~~~~~l~g~g~~~~~~a~l~t~~k~FP~~RG~a~Gi~~a~~GLsa~i~s~i~~~ 180 (492)
+. ..++++....+.++.++.+..=..-=.-..-.||..-|+-+|++....=+=+.++..+...
T Consensus 355 ~~--~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~ 417 (480)
T KOG2563|consen 355 FL--GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGI 417 (480)
T ss_pred cC--CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHH
Confidence 21 1223333344555555544421111122335699988888887654332333344333333
No 258
>PRK03612 spermidine synthase; Provisional
Probab=48.12 E-value=20 Score=39.30 Aligned_cols=52 Identities=25% Similarity=0.484 Sum_probs=36.3
Q ss_pred HHHHHHHHhhhcchhhhHHHHHHHh----hcCCCcccccccceehhhHHHHHHhhhc
Q 039263 437 YAASVIIGFCFGAQWPLLFAIISEI----FGLKYYSTLYNFGAVASPVGAYILNVKV 489 (492)
Q Consensus 437 ~~~~~liG~~~G~~~~~~P~i~se~----FG~k~~g~nyg~~~la~~~gs~l~~~~l 489 (492)
+....+.++.-|+.+.+.--+..+. .| ++.|..|+.=++++.+|+++..-.+
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g-~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRIRDQHLG-HNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchh-hhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 4445566888888866655555553 33 6788888888999999988865543
No 259
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=46.83 E-value=4.8 Score=36.69 Aligned_cols=39 Identities=8% Similarity=0.143 Sum_probs=24.9
Q ss_pred hHHHHHHHHhhhcchhhhHHHH-HHHhhcCCCcccccccc
Q 039263 436 LYAASVIIGFCFGAQWPLLFAI-ISEIFGLKYYSTLYNFG 474 (492)
Q Consensus 436 l~~~~~liG~~~G~~~~~~P~i-~se~FG~k~~g~nyg~~ 474 (492)
+.++..++|+.||.+-+.-=.- ...++|-+++-.||+-+
T Consensus 105 ~~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 105 VFFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 4456677888999865443222 55567777777777654
No 260
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=42.00 E-value=12 Score=41.05 Aligned_cols=53 Identities=17% Similarity=0.080 Sum_probs=43.6
Q ss_pred HHhhCCChhhhhHH-HHHhhhhccccccceeeeccCCcHHHHHHHHHHHHHHHH
Q 039263 56 KTSLGYDQSTLNLL-SFSKDVGGNVGVLSGLINEITPPWVVLAIGSIMNFFGYF 108 (492)
Q Consensus 56 ~~~~~~sq~~l~~i-s~~~~vg~~~~~~~G~~~D~~Gpr~~~~iG~vl~~~Gy~ 108 (492)
-+|+|++.++..++ ++.=.+..+..++.|.+.||+-.|..+++|+.+..+...
T Consensus 38 ~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~ 91 (618)
T KOG3762|consen 38 FKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTAT 91 (618)
T ss_pred HHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 35899999999997 666666667799999999999888888889987766654
No 261
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=37.23 E-value=12 Score=37.91 Aligned_cols=20 Identities=20% Similarity=0.564 Sum_probs=0.0
Q ss_pred hhhhHHHhhhhhhhcccchh
Q 039263 379 TFVSLVSIWNYLGRVVAGFA 398 (492)
Q Consensus 379 ~~Vsl~Si~N~~GRl~~G~l 398 (492)
+...+++++=.+||.+.++.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHhcchhccee
Confidence 34567888889999998875
No 262
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=33.55 E-value=1.6e+02 Score=32.09 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=67.6
Q ss_pred HHHHHHHHhhccceeEEecchhHHHhhc--CCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhcCCCchHHHHHHHHH
Q 039263 343 LIIFIATTCGVGGTLTAIDNLGQIGSSL--GYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKYKIPRPLLFTFVLLF 420 (492)
Q Consensus 343 Wllf~~~~~~~g~Gl~~i~n~~~I~~sl--g~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~~~~R~~~l~i~~~l 420 (492)
|+..+..++..-.--.+.-..-+.-+++ +-+++--+..++..+++.+.+-+..|+-+-|..+- .+-+.+..++
T Consensus 37 ~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-----k~Pli~s~ii 111 (488)
T KOG2325|consen 37 YLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-----KKPLIVSFLI 111 (488)
T ss_pred HHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-----ccCHHHHHHH
Confidence 4444433333333334455566666664 33333346778999999999999999988877532 2346678888
Q ss_pred HHHHHHHH-Hh--cCC---chhHHHHHHHHhhhcchhhhHHHHHHH
Q 039263 421 SCVGHPFI-AY--GIP---NSLYAASVIIGFCFGAQWPLLFAIISE 460 (492)
Q Consensus 421 ~~~~~ll~-~~--~~~---~~l~~~~~liG~~~G~~~~~~P~i~se 460 (492)
+++++++. +. .+. ..+.++=++.|++.|.. ++.-+.++|
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~ 156 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIAD 156 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHh
Confidence 89998775 22 122 13455666778877654 344444443
No 263
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=26.70 E-value=67 Score=35.54 Aligned_cols=48 Identities=17% Similarity=0.202 Sum_probs=41.2
Q ss_pred EecchhHHHhhcCCCCCccchhhhHHHhhhhhhhcccchhhHHHhhhc
Q 039263 359 AIDNLGQIGSSLGYPARSTTTFVSLVSIWNYLGRVVAGFASEILLKKY 406 (492)
Q Consensus 359 ~i~n~~~I~~slg~~~~~~~~~Vsl~Si~N~~GRl~~G~lSD~~~~~~ 406 (492)
+.--++-+.+.+|+++.+..+++.+--+-.+++-.+||++.||+.|||
T Consensus 30 l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r 77 (618)
T KOG3762|consen 30 LFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRR 77 (618)
T ss_pred cchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcC
Confidence 444567777889999999999999999999999999999999997643
Done!