Query 039265
Match_columns 708
No_of_seqs 445 out of 2981
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 13:18:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 3E-116 1E-120 1005.1 47.8 608 87-708 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1E-106 4E-111 929.4 53.6 593 87-707 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.1E-80 1E-84 737.9 46.0 528 99-706 6-604 (926)
4 3afg_A Subtilisin-like serine 100.0 4.8E-63 1.6E-67 556.9 36.6 365 3-575 35-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 2.2E-60 7.6E-65 518.7 21.7 343 2-574 1-392 (395)
6 3t41_A Epidermin leader peptid 100.0 3.1E-57 1.1E-61 506.5 25.3 354 2-575 43-466 (471)
7 2p4e_P Proprotein convertase s 100.0 2.9E-58 1E-62 519.7 6.2 364 4-573 76-465 (692)
8 1r6v_A Subtilisin-like serine 100.0 3.5E-56 1.2E-60 506.4 23.3 366 3-582 31-447 (671)
9 1y9z_A Alkaline serine proteas 100.0 2.2E-55 7.6E-60 486.1 24.7 383 94-595 6-437 (441)
10 1gci_A Subtilisin; hydrolase, 100.0 2.6E-53 9E-58 438.1 23.2 262 93-573 5-269 (269)
11 1r0r_E Subtilisin carlsberg; h 100.0 2.4E-53 8.2E-58 440.2 22.0 262 94-573 6-274 (274)
12 1dbi_A AK.1 serine protease; h 100.0 8.1E-53 2.8E-57 437.3 25.0 265 93-573 12-279 (280)
13 1to2_E Subtilisin BPN'; serine 100.0 9.8E-53 3.4E-57 436.9 23.3 265 93-574 5-276 (281)
14 1thm_A Thermitase; hydrolase(s 100.0 3.7E-52 1.3E-56 432.4 23.7 264 93-573 12-278 (279)
15 2x8j_A Intracellular subtilisi 100.0 1.5E-52 5.1E-57 444.8 19.6 272 92-574 21-311 (327)
16 4h6x_A Thiazoline oxidase/subt 100.0 1.1E-53 3.6E-58 459.4 10.3 297 100-573 21-337 (357)
17 2ixt_A 36KDA protease; serine 100.0 4.1E-51 1.4E-55 432.1 27.8 287 93-568 7-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 5.3E-52 1.8E-56 432.8 16.6 266 106-573 3-274 (282)
19 2z30_A TK-subtilisin; thermoco 100.0 9.1E-52 3.1E-56 438.2 18.2 271 93-574 9-317 (320)
20 2iy9_A SUBA; toxin, shiga, pla 100.0 2.9E-51 9.8E-56 440.0 17.4 279 92-575 23-330 (347)
21 4h6w_A N-terminal cyanobactin 100.0 3.8E-51 1.3E-55 431.8 15.9 273 100-574 11-288 (306)
22 3lxu_X Tripeptidyl-peptidase 2 100.0 1.3E-49 4.3E-54 470.1 27.5 408 111-708 214-653 (1354)
23 1wmd_A Protease; alpha-beta hy 100.0 1E-49 3.4E-54 440.5 21.5 288 100-575 11-319 (434)
24 1sh7_A Extracellular subtilisi 100.0 4.8E-49 1.7E-53 409.2 25.4 235 100-542 19-257 (284)
25 3lpc_A APRB2; protease, subtil 100.0 5.9E-50 2E-54 428.9 18.7 292 99-575 21-338 (340)
26 2b6n_A Proteinase K; S binding 100.0 1.9E-48 6.5E-53 404.3 24.4 237 100-542 21-261 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 2.7E-48 9.1E-53 403.4 23.2 237 99-543 20-260 (276)
28 2pwa_A Proteinase K; structure 100.0 1.9E-48 6.5E-53 403.7 21.0 239 102-568 24-271 (279)
29 1p8j_A Furin precursor; prohor 100.0 1.1E-47 3.8E-52 427.6 19.8 293 99-578 27-334 (471)
30 2oxa_A Extracellular serine pr 100.0 5.2E-47 1.8E-51 434.6 25.5 295 99-580 59-431 (600)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 9.2E-47 3.2E-51 423.0 25.1 285 99-577 43-345 (503)
32 2qtw_B Proprotein convertase s 100.0 8.8E-47 3E-51 415.7 22.7 276 102-573 18-313 (546)
33 3f7m_A Alkaline serine proteas 100.0 3.7E-46 1.3E-50 387.8 20.7 228 102-542 25-261 (279)
34 3hjr_A Extracellular serine pr 100.0 1.7E-44 5.7E-49 415.4 26.5 315 99-578 59-429 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.5E-25 5.2E-30 251.6 9.0 96 203-304 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 1.9E-22 6.6E-27 215.7 11.3 99 204-304 90-206 (372)
37 2w2n_P Proprotein convertase s 99.1 6.8E-11 2.3E-15 104.0 6.0 77 3-85 37-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 99.1 2E-10 6.9E-15 128.0 9.2 97 205-304 263-374 (544)
39 3cnq_P Subtilisin BPN'; unclea 99.0 7.8E-10 2.7E-14 91.0 7.4 72 3-89 8-79 (80)
40 2qtw_A Proprotein convertase s 98.9 1.3E-09 4.3E-14 97.0 6.1 77 3-85 47-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.7 3.5E-08 1.2E-12 79.9 8.2 70 4-85 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.7 9.9E-08 3.4E-12 91.0 12.1 94 348-442 82-187 (194)
43 2z30_B TK-subtilisin; thermoco 97.8 2.2E-05 7.4E-10 61.2 5.8 63 4-85 2-64 (65)
44 2ek8_A Aminopeptidase; metallo 96.2 0.021 7.3E-07 61.8 11.5 72 357-429 108-182 (421)
45 2ys4_A Hydrocephalus-inducing 96.0 0.021 7.3E-07 50.2 8.4 71 622-702 42-113 (122)
46 3iib_A Peptidase M28; YP_92679 95.7 0.05 1.7E-06 59.2 11.5 102 333-442 105-227 (444)
47 3kas_A Transferrin receptor pr 95.5 0.027 9.2E-07 63.9 8.8 69 360-429 128-230 (640)
48 3fed_A Glutamate carboxypeptid 94.6 0.058 2E-06 61.8 8.0 71 359-430 150-268 (707)
49 3qbt_B Inositol polyphosphate 91.0 2.3 7.8E-05 38.0 11.6 87 621-708 43-138 (140)
50 2r39_A FIXG-related protein; s 89.0 1.8 6.3E-05 37.3 9.0 55 622-678 32-86 (118)
51 3lxu_X Tripeptidyl-peptidase 2 87.5 0.26 8.9E-06 59.6 3.2 24 106-129 32-55 (1354)
52 2e6j_A Hydin protein; PAPD, st 86.7 0.73 2.5E-05 39.3 4.9 66 622-693 27-93 (112)
53 2qsv_A Uncharacterized protein 85.4 4.3 0.00015 39.2 10.3 78 622-705 20-103 (220)
54 1y9z_A Alkaline serine proteas 85.2 0.42 1.4E-05 51.8 3.2 30 449-486 182-211 (441)
55 3qis_A Inositol polyphosphate 81.0 8.1 0.00028 40.4 11.0 88 619-707 44-140 (366)
56 1z9l_A Vesicle-associated memb 72.6 10 0.00035 33.0 7.5 53 622-677 28-80 (128)
57 1msp_A MSP, major sperm protei 72.5 11 0.00039 32.7 7.7 52 622-676 26-77 (126)
58 3idu_A Uncharacterized protein 72.2 21 0.0007 31.1 9.2 51 621-675 33-84 (127)
59 1wic_A Hypothetical protein ri 67.4 15 0.0005 33.2 7.5 53 622-677 36-88 (152)
60 2cri_A Vesicle-associated memb 67.2 13 0.00044 33.3 7.1 53 622-677 32-84 (147)
61 1w8o_A Bacterial sialidase; 3D 62.4 47 0.0016 36.9 12.3 80 611-695 363-443 (601)
62 1row_A SSP-19, MSP-domain prot 58.8 28 0.00097 29.3 7.2 50 624-676 18-67 (109)
63 1m1s_A WR4; structural genomic 58.6 35 0.0012 29.1 7.8 52 623-677 25-76 (116)
64 2qsv_A Uncharacterized protein 47.5 50 0.0017 31.5 8.0 76 621-703 134-216 (220)
65 3zyz_A Beta-D-glucoside glucoh 43.1 66 0.0023 36.7 9.3 55 622-677 614-675 (713)
66 3isy_A Bsupi, intracellular pr 43.1 95 0.0033 26.6 8.1 53 622-675 19-88 (120)
67 3q48_A Chaperone CUPB2; IG fol 37.3 1.3E+02 0.0044 29.4 9.2 55 622-677 43-105 (257)
68 2kq1_A BH0266 protein; solutio 31.9 14 0.00047 31.7 1.0 55 623-677 55-111 (119)
69 1wgl_A TOLL-interacting protei 31.0 15 0.0005 27.3 0.9 29 513-541 11-39 (59)
70 2x41_A Beta-glucosidase; hydro 30.5 43 0.0015 38.3 5.1 55 622-677 616-678 (721)
71 2l04_A Major tail protein V; b 29.4 46 0.0016 27.0 3.7 28 651-679 9-36 (91)
72 3sd2_A Putative member of DUF3 28.5 2.3E+02 0.0079 23.3 7.7 65 614-692 35-100 (101)
73 1ni7_A ER75, hypothetical prot 27.7 38 0.0013 30.5 3.2 32 500-532 78-109 (155)
74 4ay0_A Chaperone protein CAF1M 25.2 2.2E+02 0.0076 27.0 8.3 57 622-679 27-88 (218)
75 2xg5_A PAPD, chaperone protein 24.8 2.6E+02 0.009 26.4 8.8 53 622-675 15-73 (218)
76 3hrz_B Cobra venom factor; ser 23.9 2.5E+02 0.0087 27.1 8.7 67 608-676 84-155 (252)
77 1klf_A FIMC chaperone, chapero 23.5 2.7E+02 0.0094 26.0 8.6 53 622-675 15-72 (205)
78 4djm_A DRAB; chaperone, PILI; 23.2 2.6E+02 0.009 26.9 8.5 55 622-677 37-94 (239)
79 3g0m_A Cysteine desulfuration 23.2 38 0.0013 30.0 2.2 33 499-532 70-102 (141)
80 2co7_B SAFB chaperone, putativ 23.1 2.4E+02 0.0082 26.8 8.1 57 622-679 27-86 (221)
81 3abz_A Beta-glucosidase I; gly 20.7 1.8E+02 0.0061 33.8 7.8 52 622-674 736-795 (845)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=2.8e-116 Score=1005.08 Aligned_cols=608 Identities=40% Similarity=0.651 Sum_probs=549.1
Q ss_pred ccCCCcccccccCCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCC------CCCceeEeeeecc
Q 039265 87 TTHSPSFLGLHQGMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFS------TCNNKLIGARTFN 160 (708)
Q Consensus 87 ~~~s~~~~g~~~~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~------~~~~kv~g~~~~~ 160 (708)
++++|+|+||++...+|..+.+|+||+|||||||||++||+|.+.++++++.+|+|.|+.+ .||+|+++.++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 4678999999887889999999999999999999999999999999999999999999875 6999999999998
Q ss_pred cCCC-----CC-CCCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCCHHHHHHHH
Q 039265 161 IEGN-----VK-GTEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCTESDLLAGL 234 (708)
Q Consensus 161 ~~~~-----~~-~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai 234 (708)
.++. .. +..++.|..||||||||||||+.+++.+++|++.|.+.||||+|+|++||+++.. ++..+++++||
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~--g~~~~~i~~Ai 158 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE--GTFTSDLIAAM 158 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT--EECHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCC--CCCHHHHHHHH
Confidence 5431 11 1456889999999999999999988888888888889999999999999999988 79999999999
Q ss_pred HHHHHCCCcEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEc
Q 039265 235 DAAIEDGVDVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKL 314 (708)
Q Consensus 235 ~~a~~~g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~ 314 (708)
+||+++|+||||||||+...++..+++..++++|.++|++||+||||+|+...++++.+||+|+|||++.++.|...+.+
T Consensus 159 ~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~l 238 (649)
T 3i6s_A 159 DQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL 238 (649)
T ss_dssp HHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEE
T ss_pred HHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEe
Confidence 99999999999999998877788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcc--cCcEEEeecCCCcchhhHHHHHHHcCCcEE
Q 039265 315 GNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDV--KGKVVLCERGGGIARIFKGEQVKNAGGAAM 392 (708)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~ 392 (708)
++++.+.+.++|..... ...+|+++.. ....|.+..++..++ +|||++|.|+ .|.+.+|..+++++|+.++
T Consensus 239 gng~~~~g~sl~~~~~~-~~~~plv~~~-----~~~~C~~~~l~~~~vdl~GkIvlc~~g-~~~~~~k~~~~~~~Ga~g~ 311 (649)
T 3i6s_A 239 GNGLKIRGWSLFPARAF-VRDSPVIYNK-----TLSDCSSEELLSQVENPENTIVICDDN-GDFSDQMRIITRARLKAAI 311 (649)
T ss_dssp TTSCEEEEECCCSSCBC-EEEEEEECCT-----TTTTCCCHHHHTTSSSGGGCEEEECCC-SCHHHHHHHHHHHTCSEEE
T ss_pred CCCcEEeeeecccCccc-CcceeeEecc-----cccccccccccccccccCCcEEEEeCC-CccHHHHHHHHHhcCceEE
Confidence 99999999999887643 6679999876 356798887777777 9999999999 9999999999999999999
Q ss_pred EEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCc
Q 039265 393 ILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPD 472 (708)
Q Consensus 393 i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPD 472 (708)
|++|+. .....+.+.+|.+.|+..+|+.|++|+++..+++++|.+..+..+..+.+.++.||||||+...++++|||
T Consensus 312 i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPD 388 (649)
T 3i6s_A 312 FISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPD 388 (649)
T ss_dssp EECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCC
T ss_pred EEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCe
Confidence 999986 44556788999999999999999999999999999999999999888999999999999999878999999
Q ss_pred eeeCCCcEEeeecCCC----CCCCC-CCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCcc
Q 039265 473 IIGPGLSILAAWFEPL----DFNTN-PKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGER 547 (708)
Q Consensus 473 I~APG~~I~sa~~~~~----~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~ 547 (708)
|+|||++|+++|+... ...+. +...|..+||||||||||||+||||||+||+|+|++||++||+||+++++.+.+
T Consensus 389 I~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~ 468 (649)
T 3i6s_A 389 ILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKP 468 (649)
T ss_dssp EEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSB
T ss_pred EEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCc
Confidence 9999999999998743 11111 336899999999999999999999999999999999999999999999999999
Q ss_pred ccccC-CCCCCCCccCCCCCCcCCCCCCcccccCCCCCcccccccCCCCcceeEEEecCC----c----cccccCccccc
Q 039265 548 IVDET-LRPADIFAIGAGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDKEVGILVHRP----V----AQLNYPSFSVT 618 (708)
Q Consensus 548 ~~~~~-~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~n~ps~~~~ 618 (708)
+.+.. +.++.++.||+|+||+.+|++||||||+..+||+.|||+++|+..+++.++++. | .+||||||++.
T Consensus 469 i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~~~~~lNyPs~~~~ 548 (649)
T 3i6s_A 469 IKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSNPSADLNYPSFIAL 548 (649)
T ss_dssp CEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCCCCCCCCCSSEEEE
T ss_pred ccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCCchhhcCCCcEEee
Confidence 88764 678889999999999999999999999999999999999999999998887654 2 58999999998
Q ss_pred C-C-Cc-----eEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCceEEEEEE
Q 039265 619 L-G-PA-----QTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQFAQGYIT 691 (708)
Q Consensus 619 ~-~-~~-----~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~i~ 691 (708)
+ . +. ++|+|||||||+...+|+++++.|.|++|+|+|++|+|.+.+|+++|+|+|+...... ..+.||+|+
T Consensus 549 ~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~--~~~~fg~l~ 626 (649)
T 3i6s_A 549 YSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEG--QSRNVGSIT 626 (649)
T ss_dssp ECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC-----CCCEEEEE
T ss_pred cccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCC--CceEEEEEE
Confidence 6 3 35 8999999999998899999999999999999999999998899999999999875443 368999999
Q ss_pred EEc--CceEEEEeEEEEeC
Q 039265 692 WVS--AKYSVRSPISVRLQ 708 (708)
Q Consensus 692 ~~~--~~~~~~~P~~~~~~ 708 (708)
|++ +.|.||+||+|+|.
T Consensus 627 w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 627 WVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEETTSCCEEEEEEEEEEC
T ss_pred EEcCCCCeEEEEeEEEEEc
Confidence 999 99999999999974
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.1e-106 Score=929.42 Aligned_cols=593 Identities=43% Similarity=0.714 Sum_probs=503.2
Q ss_pred ccCCCcccccccCCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCC---CCCceeEeeeecccCC
Q 039265 87 TTHSPSFLGLHQGMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFS---TCNNKLIGARTFNIEG 163 (708)
Q Consensus 87 ~~~s~~~~g~~~~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~---~~~~kv~g~~~~~~~~ 163 (708)
++++|+|+||++ .+|.+..+|+||+|||||||||++||+|.++++++++.+|+|.|+.+ .||+|+++.++|..+.
T Consensus 1 tt~s~~flGl~~--~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~ 78 (621)
T 3vta_A 1 TTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGR 78 (621)
T ss_dssp CCSHHHHTTCCT--TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSS
T ss_pred CCCChhHcCCCc--cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCC
Confidence 468899999964 58899999999999999999999999999999999999999999987 7999999999998765
Q ss_pred CCCC--CCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHHCC
Q 039265 164 NVKG--TEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIEDG 241 (708)
Q Consensus 164 ~~~~--~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~~g 241 (708)
.... ..+++|++||||||||||||+...+.+..|.+.+.++||||+|+|++||+|++. ++..+++++||++|+++|
T Consensus 79 ~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~--g~~~~di~~a~~~a~~~g 156 (621)
T 3vta_A 79 PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND--GCSDTDILAAYDDAIADG 156 (621)
T ss_dssp SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT--EECHHHHHHHHHHHHHHT
T ss_pred ccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCC--CCCHHHHHHHHHHHHHhC
Confidence 4322 556889999999999999999888888888888889999999999999999998 899999999999999999
Q ss_pred CcEEEEccCCCC-CCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEcCCCcee
Q 039265 242 VDVLSISIGGGS-VPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKLGNREEF 320 (708)
Q Consensus 242 ~dVIn~S~G~~~-~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~ 320 (708)
+||||||||+.. ..+..++++.++++|.++|+++|+||||+|+...++++.+||+++|++++.++.+...+.++++..+
T Consensus 157 ~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~ 236 (621)
T 3vta_A 157 VDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSF 236 (621)
T ss_dssp CSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEE
T ss_pred CCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCcee
Confidence 999999999864 3456788999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCCCCCceeEEEecCCCCC-----CCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEe
Q 039265 321 DGESVFQPKDFPQTPLPLVYAGMNGKP-----ESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILM 395 (708)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~ 395 (708)
.+.+++... ...+++++....... ....|.+..+++.+++|||++|.++ +..+..+...+|+.++|++
T Consensus 237 ~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~----~~~~~~~~~~~Ga~gvi~~ 309 (621)
T 3vta_A 237 QGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS----FGPHEFFKSLDGAAGVLMT 309 (621)
T ss_dssp EEBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC----CCHHHHHHHHTTCSEEEEE
T ss_pred eeeecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecC----CChhHHhhhhcceeEEEEE
Confidence 888776432 345666655443221 3456888889999999999999765 4467778888999999999
Q ss_pred cCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceee
Q 039265 396 NDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIG 475 (708)
Q Consensus 396 ~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~A 475 (708)
++.... .+.+.+|...++..++..++.|+.....+.+.+... ........+.++.||||||+...++++||||+|
T Consensus 310 ~~~~~~----~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~-~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~A 384 (621)
T 3vta_A 310 SNTRDY----ADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKS-TTILNASAPVVVSFSSRGPNRATKDVIKPDISG 384 (621)
T ss_dssp CSCCSS----CCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCC-EEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEE
T ss_pred ecCCCc----ccccccceEEECHHHHHHHHHHHhccCCcceEEecc-eEeccCCCCceeeecCCCCCCCCCCeecccccc
Confidence 875442 356789999999999999999999988888776443 344456788999999999998778999999999
Q ss_pred CCCcEEeeecCCC-CCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCC
Q 039265 476 PGLSILAAWFEPL-DFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLR 554 (708)
Q Consensus 476 PG~~I~sa~~~~~-~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~ 554 (708)
||++|+|+++... .........|..+||||||||||||+||||||+||+|+|++||++||+||++++..+ .
T Consensus 385 PG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~--------~ 456 (621)
T 3vta_A 385 PGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARF--------N 456 (621)
T ss_dssp ECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTT--------C
T ss_pred CCcceEeecCccccccCcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccC--------C
Confidence 9999999998644 233344578999999999999999999999999999999999999999999886553 3
Q ss_pred CCCCCccCCCCCCcCCCCCCcccccCCCCCcccccccCCCCcceeEEEecCCc----------cccccCcccccCCC---
Q 039265 555 PADIFAIGAGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDKEVGILVHRPV----------AQLNYPSFSVTLGP--- 621 (708)
Q Consensus 555 ~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~n~ps~~~~~~~--- 621 (708)
+..+++||+|+||+.+|++||||||+..+||+.|+|+++|+.++++.+++... .+||||||++.+..
T Consensus 457 ~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~ 536 (621)
T 3vta_A 457 PQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQT 536 (621)
T ss_dssp TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSCC
T ss_pred CCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEEEccCCCc
Confidence 56779999999999999999999999999999999999999999988876432 68999999986542
Q ss_pred -ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCceEEEEEEEEcCceEEE
Q 039265 622 -AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQFAQGYITWVSAKYSVR 700 (708)
Q Consensus 622 -~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~i~~~~~~~~~~ 700 (708)
+++|+|||||+|....||+++++.|.|++|+|+|++|+|.+.+|+++|+|+|+... . ..++||+|+|+|+.|.||
T Consensus 537 ~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~~--~--~~~~~g~l~w~d~~h~Vr 612 (621)
T 3vta_A 537 FNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI--K--GFVVSASLVWSDGVHYVR 612 (621)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEECC--C--SSEEEEEEEEECSSCCCE
T ss_pred eEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEecC--C--CceEEEEEEEEcCCEEEE
Confidence 78999999999999999999999999999999999999998899999999998743 2 479999999999999999
Q ss_pred EeEEEEe
Q 039265 701 SPISVRL 707 (708)
Q Consensus 701 ~P~~~~~ 707 (708)
+||+|+.
T Consensus 613 ~Pi~v~~ 619 (621)
T 3vta_A 613 SPITITS 619 (621)
T ss_dssp EEEEEEC
T ss_pred eCEEEEE
Confidence 9999986
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.1e-80 Score=737.89 Aligned_cols=528 Identities=24% Similarity=0.352 Sum_probs=417.3
Q ss_pred CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccccccc---------------CC-CCCceeEeeeecccC
Q 039265 99 GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCD---------------FS-TCNNKLIGARTFNIE 162 (708)
Q Consensus 99 ~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~---------------~~-~~~~kv~g~~~~~~~ 162 (708)
++.+|.++++|+||+|||||||||++||+|.+. ..|++.|. .+ +||+|++++++|..+
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 445999999999999999999999999999843 34555443 12 799999999999864
Q ss_pred CCCCCCCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC--CCHHHHHHHHHHHHHC
Q 039265 163 GNVKGTEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD--CTESDLLAGLDAAIED 240 (708)
Q Consensus 163 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g--~~~~~i~~ai~~a~~~ 240 (708)
....|+.||||||||||||+...+.+. .+.+.||||+|+|++||+|+.. + +..+++++||++|+++
T Consensus 80 ------~~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~--g~~~~~~~i~~Ai~~Ai~~ 147 (926)
T 1xf1_A 80 ------GKTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVN--GLADYARNYAQAIRDAINL 147 (926)
T ss_dssp ------SCCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCS--CHHHHHHHHHHHHHHHHHT
T ss_pred ------CCCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCC--CCCCcHHHHHHHHHHHHHh
Confidence 223389999999999999987543321 2345899999999999999876 5 4567899999999999
Q ss_pred CCcEEEEccCCCC--CCCCCCHHHHHHHHHHhcCceEEEecCCCCCCC---------------CcccCCCCceEEEcccc
Q 039265 241 GVDVLSISIGGGS--VPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFN---------------STISNEAPWILTVGAST 303 (708)
Q Consensus 241 g~dVIn~S~G~~~--~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~---------------~~~~~~~p~vitVga~~ 303 (708)
|+||||||||+.. .....+.+..++++|.++|++||+||||+|... ...++.+||+|+|||++
T Consensus 148 gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~ 227 (926)
T 1xf1_A 148 GAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYS 227 (926)
T ss_dssp TCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEB
T ss_pred CCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEeccc
Confidence 9999999999864 234567888899999999999999999999632 22345689999999999
Q ss_pred cCcceEEEEEc-CCCceeeeeeccCCCCC-CCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHH
Q 039265 304 LDRSIVATAKL-GNREEFDGESVFQPKDF-PQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKG 381 (708)
Q Consensus 304 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~ 381 (708)
.++.+...+.+ +++....+.+++...++ ....+|+++... .|.+..+ .+++|||+||.|+ .|.+.+|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------g~~~~~~--~~v~Gkivl~~rg-~~~~~~k~ 297 (926)
T 1xf1_A 228 PDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------GTKEDDF--KDVKGKIALIERG-DIDFKDKI 297 (926)
T ss_dssp CSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------SCSTTTT--TTCTTSEEEEECC-SSCHHHHH
T ss_pred cccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------CCCccch--hhcCCeEEEEECC-CCCHHHHH
Confidence 99998888877 55555555555433333 456799998764 3765555 6899999999999 99999999
Q ss_pred HHHHHcCCcEEEEecCCCCCcc-cccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceE--eCCcCCCccccccC
Q 039265 382 EQVKNAGGAAMILMNDEPNAFS-VIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTV--IGNSLAPTVVSFSS 458 (708)
Q Consensus 382 ~~~~~~ga~~~i~~~~~~~~~~-~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~a~fSs 458 (708)
.+++++|+.++|++++...... ......++|+..++..+|+.|+. .+..+|+|..+. +.....+.++.|||
T Consensus 298 ~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~~~~~a~FSS 371 (926)
T 1xf1_A 298 AKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLPTASGTKLSRFSS 371 (926)
T ss_dssp HHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEECSSCSBCCTTSC
T ss_pred HHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecccCCcceeccccC
Confidence 9999999999999988654332 23346789999999999988873 345667776643 44566789999999
Q ss_pred CCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHH----hcCCCCCHHH----H
Q 039265 459 RGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLK----SSHPYWSPAA----I 530 (708)
Q Consensus 459 ~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----q~~p~~s~~~----v 530 (708)
|||+. ++++||||+|||++|+++++. +.|..+||||||||||||+||||+ +.||+|+|+| |
T Consensus 372 rGp~~--~~~lKPDI~APG~~I~sa~~~---------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~I 440 (926)
T 1xf1_A 372 WGLTA--DGNIKPDIAAPGQDILSSVAN---------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLA 440 (926)
T ss_dssp CCBCT--TSCBSCCEEEECCCEEESSSC---------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHH
T ss_pred CCCCC--CCccCceEECCCCCEEeeccC---------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHH
Confidence 99996 789999999999999999986 789999999999999999999995 5699999997 9
Q ss_pred HHHHHccccccccCCccccccCCCCCCCCccCCCCCCcCCCCCCcccccCCCCCcccccccCCCCcceeEEEecCCcccc
Q 039265 531 KSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDKEVGILVHRPVAQL 610 (708)
Q Consensus 531 k~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (708)
|++||+||+++...+. ...+++++||+|+||+.+|+++.+ ++|..+++...+.
T Consensus 441 ks~L~~TA~~~~~~~~------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~i~---------- 493 (926)
T 1xf1_A 441 KKVLMSSATALYDEDE------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSSKVH---------- 493 (926)
T ss_dssp HHHHHHHSBCCEEGGG------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCSCEE----------
T ss_pred HHHHHhcCCCcccCCC------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcceee----------
Confidence 9999999998764321 234577899999999999999854 5787766543321
Q ss_pred ccCcccccCCCceEEEEEEEecCCC--ceeEEEEEeC--CCCeEEEeecCe--------EEEccCCcEEEEEEEEEecC-
Q 039265 611 NYPSFSVTLGPAQTFTRTVTNVGQV--YSSYAVNVVA--PQGVVVSVKPSK--------LYFSKVNQKATYSVTFTRSG- 677 (708)
Q Consensus 611 n~ps~~~~~~~~~~~~~tv~n~g~~--~~ty~~~~~~--~~~~~v~v~p~~--------~~~~~~~~~~~~~v~~~~~~- 677 (708)
++. +....+++|||+|+|+. ..+|++++.. |.+..++|+|.. |++++ |++++|+|+|++..
T Consensus 494 -l~~----~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~a-g~~~~~~vt~~~~~~ 567 (926)
T 1xf1_A 494 -LNN----VSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPA-NSSKQVTVPIDASRF 567 (926)
T ss_dssp -EEE----ECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECT-TEEEEEEEEEECHHH
T ss_pred -ccc----cCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECC-CCEEEEEEEEEcCcc
Confidence 111 12367889999999985 4567777764 667777776654 55555 99999999999852
Q ss_pred -------CCCCCCceEEEEEEEE--cCceE-EEEeEEEE
Q 039265 678 -------SGYTSGQFAQGYITWV--SAKYS-VRSPISVR 706 (708)
Q Consensus 678 -------~~~~~~~~~~G~i~~~--~~~~~-~~~P~~~~ 706 (708)
.+. ..++||+|+|+ ++.|. ||+||++.
T Consensus 568 ~~~~~~~~~~--~~~~~G~i~~~~~~~~~~~v~~P~~~~ 604 (926)
T 1xf1_A 568 SKDLLAQMKN--GYFLEGFVRFKQDPTKEELMSIPYIGF 604 (926)
T ss_dssp HHHHHHHSTT--CEEEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred chhhcccccC--CcEEEEEEEEEeCCCCCCEEEeeeEEE
Confidence 122 36899999999 45564 99999986
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=4.8e-63 Score=556.86 Aligned_cols=365 Identities=32% Similarity=0.482 Sum_probs=291.3
Q ss_pred CceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCHHHHHHH-----------hcC
Q 039265 3 LQTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTEEEVQDM-----------KKK 71 (708)
Q Consensus 3 ~~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~~~i~~L-----------~~~ 71 (708)
+..|||.||+.... +...+.+++. +.+++++|+ .|+||+++++.+++++| +++
T Consensus 35 ~~~~iV~~~~~~~~---------~~~~~~~~~~------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~ 98 (539)
T 3afg_A 35 EVSTIIMFDNQADK---------EKAVEILDFL------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQL 98 (539)
T ss_dssp EEEEEEEESSHHHH---------HHHHHHHHHH------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCC
T ss_pred ceEEEEEECCCCCH---------HHHHHHHHhc------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccC
Confidence 35699999875421 1122334433 568999997 79999999999999999 899
Q ss_pred CCeEEEEeceeecccccCC--CcccccccCCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCC
Q 039265 72 NGFVSARPERKVRLQTTHS--PSFLGLHQGMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTC 149 (708)
Q Consensus 72 ~~V~~V~~~~~~~~~~~~s--~~~~g~~~~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~ 149 (708)
|+|++|++++.+++..... ...+...++..+|..+++|+||+|||||||||++||+|.+
T Consensus 99 ~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~------------------- 159 (539)
T 3afg_A 99 SGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG------------------- 159 (539)
T ss_dssp TTEEEEEECCEEECC-----------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT-------------------
T ss_pred CCeeEEEecccccccCccccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC-------------------
Confidence 9999999999887753321 1112222356799999999999999999999999999974
Q ss_pred CceeEeeeecccCCCCCCCCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHH
Q 039265 150 NNKLIGARTFNIEGNVKGTEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTES 228 (708)
Q Consensus 150 ~~kv~g~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~ 228 (708)
++++.++|..+ ...+.|++||||||||||||.... ..|.+.||||+|+|+.+|++++. + +..+
T Consensus 160 --~i~~~~d~~~~-----~~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~--g~~~~~ 223 (539)
T 3afg_A 160 --KVIGWVDFVNG-----KTTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQ--GSGSIS 223 (539)
T ss_dssp --TEEEEEETTTC-----CSSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCTT--SEEEHH
T ss_pred --CEeeeEECCCC-----CCCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecCC--CCcCHH
Confidence 36667778754 345678999999999999987422 12335899999999999999876 5 7788
Q ss_pred HHHHHHHHHHHC----CCcEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCC--CcccCCCCceEEEccc
Q 039265 229 DLLAGLDAAIED----GVDVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFN--STISNEAPWILTVGAS 302 (708)
Q Consensus 229 ~i~~ai~~a~~~----g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~--~~~~~~~p~vitVga~ 302 (708)
++++||+||+++ |++|||||||........+.+..++.++.++|++||+||||+|+.. ..+++..+++|+|||+
T Consensus 224 ~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~ 303 (539)
T 3afg_A 224 DIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAV 303 (539)
T ss_dssp HHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEE
T ss_pred HHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeee
Confidence 999999999986 8999999999875545568899999999999999999999999864 3457888999999985
Q ss_pred ccCcceEEEEEcCCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHH
Q 039265 303 TLDRSIVATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGE 382 (708)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~ 382 (708)
+.
T Consensus 304 ~~------------------------------------------------------------------------------ 305 (539)
T 3afg_A 304 DK------------------------------------------------------------------------------ 305 (539)
T ss_dssp CT------------------------------------------------------------------------------
T ss_pred cC------------------------------------------------------------------------------
Confidence 21
Q ss_pred HHHHcCCcEEEEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCC
Q 039265 383 QVKNAGGAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPN 462 (708)
Q Consensus 383 ~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~ 462 (708)
.+.++.||||||+
T Consensus 306 -------------------------------------------------------------------~~~~a~fSs~Gp~ 318 (539)
T 3afg_A 306 -------------------------------------------------------------------YDVITDFSSRGPT 318 (539)
T ss_dssp -------------------------------------------------------------------TSCBCSSSCCCCC
T ss_pred -------------------------------------------------------------------CcccccccCCCCC
Confidence 1267899999999
Q ss_pred CCCCCCcCCceeeCCCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccc
Q 039265 463 LASPGILKPDIIGPGLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLN 542 (708)
Q Consensus 463 ~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~ 542 (708)
. ++++||||+|||++|+++++............|..++|||||||||||+||||+|++|+|++++||++|++||+++.
T Consensus 319 ~--~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~ 396 (539)
T 3afg_A 319 A--DNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVK 396 (539)
T ss_dssp T--TCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSS
T ss_pred C--CCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 8 68999999999999999986421001111236999999999999999999999999999999999999999999875
Q ss_pred cCCccccccCCCCCCCCccCCCCCCcCCCCCCc
Q 039265 543 MNGERIVDETLRPADIFAIGAGHVNPSRANDPG 575 (708)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 575 (708)
..+ .++..||+|+||+.+|++..
T Consensus 397 ~~~----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 397 PDE----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp GGG----------CSBTTTBTCBCCHHHHHTGG
T ss_pred CCC----------CCccCccCCccCHHHHhhhc
Confidence 321 25578999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=2.2e-60 Score=518.68 Aligned_cols=343 Identities=26% Similarity=0.360 Sum_probs=280.7
Q ss_pred CCceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCHHHHHHHhcCCCeEEEEece
Q 039265 2 NLQTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTEEEVQDMKKKNGFVSARPER 81 (708)
Q Consensus 2 ~~~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~~~i~~L~~~~~V~~V~~~~ 81 (708)
++.+|||.||+... . ++++++. +.+++++|. .|++|+++++.+++++|+++|+|++|++++
T Consensus 1 ~~~~~iV~~~~~~~---~---------~~~~~~~------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~ 61 (395)
T 2z2z_A 1 NTIRVIVSVDKAKF---N---------PHEVLGI------GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDH 61 (395)
T ss_dssp CEEEEEEEECTTTC---C---------HHHHHHT------TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECC
T ss_pred CcEEEEEEECCCcc---H---------HHHHHHc------CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEee
Confidence 46799999999743 1 1233333 678999998 599999999999999999999999999999
Q ss_pred eecccccCC-----------Cccccccc--CCcccccCCCCCc--cEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccC
Q 039265 82 KVRLQTTHS-----------PSFLGLHQ--GMGVWKESNFGKG--VIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDF 146 (708)
Q Consensus 82 ~~~~~~~~s-----------~~~~g~~~--~~~~~~~g~~G~G--v~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~ 146 (708)
.+++..... ...|++.. .+.+|..+ +|+| |+|||||||||++||+|.++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~--------------- 125 (395)
T 2z2z_A 62 QAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------------- 125 (395)
T ss_dssp EEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG---------------
T ss_pred eecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc---------------
Confidence 887643211 23455543 45689998 9999 99999999999999999753
Q ss_pred CCCCceeEeeeecccCCCCCCCCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-C
Q 039265 147 STCNNKLIGARTFNIEGNVKGTEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-C 225 (708)
Q Consensus 147 ~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~ 225 (708)
+...++|..+.......+..|+.||||||||||+|.. + ..+ +.||||+|+|+.+|+++.. + +
T Consensus 126 ------~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~-n-------~~g-~~GvAp~a~l~~~kv~~~~--g~~ 188 (395)
T 2z2z_A 126 ------IAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALN-N-------DIG-VVGVAPGVQIYSVRVLDAR--GSG 188 (395)
T ss_dssp ------EEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCC-S-------SSS-CCCSSTTCEEEEEECSCTT--SEE
T ss_pred ------cccCccccCCcccCCCCCCCCCCCCHHHHHHHHHeec-C-------CCc-eEEECCCCEEEEEEEecCC--CCc
Confidence 4445556543211001124688999999999999873 1 112 3799999999999999876 5 7
Q ss_pred CHHHHHHHHHHHHHC--------------------CCcEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCC
Q 039265 226 TESDLLAGLDAAIED--------------------GVDVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPF 285 (708)
Q Consensus 226 ~~~~i~~ai~~a~~~--------------------g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~ 285 (708)
..+++++||+||+++ +++|||||||+... ...+..++.++.++|+++|+||||+|..
T Consensus 189 ~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~ 265 (395)
T 2z2z_A 189 SYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAP 265 (395)
T ss_dssp EHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCS
T ss_pred cHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEECCCCCCC
Confidence 788999999999998 99999999998632 3567778888999999999999999998
Q ss_pred CCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCc
Q 039265 286 NSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGK 365 (708)
Q Consensus 286 ~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ 365 (708)
...+|+..+++|+|||++.
T Consensus 266 ~~~~Pa~~~~vi~Vga~~~------------------------------------------------------------- 284 (395)
T 2z2z_A 266 SPSYPAAYPEVIAVGAIDS------------------------------------------------------------- 284 (395)
T ss_dssp SCCBTTTSTTEEEEEEECT-------------------------------------------------------------
T ss_pred CCCCccCCCCEEEEEEecC-------------------------------------------------------------
Confidence 8888999999999999521
Q ss_pred EEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEe
Q 039265 366 VVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVI 445 (708)
Q Consensus 366 ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 445 (708)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCC--
Q 039265 446 GNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHP-- 523 (708)
Q Consensus 446 ~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-- 523 (708)
.+.++.||+||| +|+|||++|+|+++. +.|..++|||||||||||++|||+|++|
T Consensus 285 ----~~~~a~fS~~G~----------~v~APG~~i~s~~~~---------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~ 341 (395)
T 2z2z_A 285 ----NDNIASFSNRQP----------EVSAPGVDILSTYPD---------DSYETLMGTAMATPHVSGVVALIQAAYYQK 341 (395)
T ss_dssp ----TSCBCTTSCSSC----------SEEEECSSEEEEETT---------TEEEEEESHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCcccCCCC----------CEEeCCCCeeeecCC---------CceEecCCHHHHHHHHHHHHHHHHHhCccc
Confidence 126789999997 679999999999986 7899999999999999999999999999
Q ss_pred -----------CCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcCCCCCC
Q 039265 524 -----------YWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRANDP 574 (708)
Q Consensus 524 -----------~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 574 (708)
.|++.+||++|++||+++... ..+..||||+||+.+|++.
T Consensus 342 ~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 342 YGKILPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHhhccccCCC-----------CCCCCccCceeCHHHHHHH
Confidence 999999999999999987432 3457899999999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=3.1e-57 Score=506.53 Aligned_cols=354 Identities=20% Similarity=0.225 Sum_probs=277.8
Q ss_pred CCceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCHHHHHHHhc-CCCeEEEEec
Q 039265 2 NLQTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTEEEVQDMKK-KNGFVSARPE 80 (708)
Q Consensus 2 ~~~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~~~i~~L~~-~~~V~~V~~~ 80 (708)
+++.|||++++.. .+.+++++. +.++++.|. .|++|+++++.+++++|++ +|+|++|+++
T Consensus 43 ~~~~yiv~~~~~~------------~~~~~~~~~------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~ 103 (471)
T 3t41_A 43 EELYYSVEYKNTA------------TFNKLVKKK------SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINAT 103 (471)
T ss_dssp CCEEEEEEESCHH------------HHHHHHHHH------TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEEC
T ss_pred CceEEEEEcCCHH------------HHHHHHHhC------CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEec
Confidence 3567888776632 123445544 677888986 5999999999999999999 9999999999
Q ss_pred eeecccccCC----------CcccccccC---CcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCC
Q 039265 81 RKVRLQTTHS----------PSFLGLHQG---MGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFS 147 (708)
Q Consensus 81 ~~~~~~~~~s----------~~~~g~~~~---~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~ 147 (708)
+.+++..... ...|++..+ ..+|+.+.+|+||+|||||||||++||+|.++... +.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~~~-------~~---- 172 (471)
T 3t41_A 104 CSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNFST-------DS---- 172 (471)
T ss_dssp CSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTBCT-------TC----
T ss_pred ceeccccccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCccc-------CC----
Confidence 8877654322 123555442 36899999999999999999999999999864211 10
Q ss_pred CCCceeEeeeecccCCCCC--CCCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCC
Q 039265 148 TCNNKLIGARTFNIEGNVK--GTEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDC 225 (708)
Q Consensus 148 ~~~~kv~g~~~~~~~~~~~--~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~ 225 (708)
..++....|....... ....+.|..||||||||||+|+.. +.||||+|+|+.+|++++. .+
T Consensus 173 ---~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~~~--~~ 235 (471)
T 3t41_A 173 ---KNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTMYRVFGSK--KT 235 (471)
T ss_dssp ---EECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEEECCSSS--CC
T ss_pred ---cccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeEEEEEeccCC--CC
Confidence 0111111122111100 033567899999999999997631 4899999999999999876 68
Q ss_pred CHHHHHHHHHHHHHCCCcEEEEccCCCCC-------------CCCCCHHHHHHHHHHhcCceEEEecCCCCCCCC-----
Q 039265 226 TESDLLAGLDAAIEDGVDVLSISIGGGSV-------------PFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNS----- 287 (708)
Q Consensus 226 ~~~~i~~ai~~a~~~g~dVIn~S~G~~~~-------------~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~----- 287 (708)
...++++||+||++++++|||||||.... ....+.+..++..+.++|++||+||||+|....
T Consensus 236 ~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~ 315 (471)
T 3t41_A 236 ELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKL 315 (471)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHH
T ss_pred cHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCccccc
Confidence 89999999999999999999999997310 012356778888899999999999999998654
Q ss_pred -------------cccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCC
Q 039265 288 -------------TISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGN 354 (708)
Q Consensus 288 -------------~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 354 (708)
.+|+..+++|+|||++.
T Consensus 316 ~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~-------------------------------------------------- 345 (471)
T 3t41_A 316 KLQREYQGNGEVKDVPASMDNVVTVGSTDQ-------------------------------------------------- 345 (471)
T ss_dssp HHTTTCCSSSEEEEETTTSTTEEEEEEECT--------------------------------------------------
T ss_pred ccccccccCCceeeccccCCCeEEEEeeCC--------------------------------------------------
Confidence 26788899999998521
Q ss_pred CCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCc
Q 039265 355 GSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATP 434 (708)
Q Consensus 355 ~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~ 434 (708)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCc----------------------EEeeecCCCCCCC
Q 039265 435 MATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLS----------------------ILAAWFEPLDFNT 492 (708)
Q Consensus 435 ~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~----------------------I~sa~~~~~~~~~ 492 (708)
.+.++.||++||+. |||+|||++ |+++++.
T Consensus 346 ---------------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~------ 397 (471)
T 3t41_A 346 ---------------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN------ 397 (471)
T ss_dssp ---------------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT------
T ss_pred ---------------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCC------
Confidence 12678999999964 599999987 8999876
Q ss_pred CCCcceeeccchhhhHHHHHHHHHHHHhcCC-CCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcCCC
Q 039265 493 NPKSIFNIMSGTSMACPHLSGIAALLKSSHP-YWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRA 571 (708)
Q Consensus 493 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~A 571 (708)
+.|..++|||||||||||++|||+|++| .++|++||++|++||++... .++..||||+||+.+|
T Consensus 398 ---~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------~~~~~~G~G~vd~~~A 462 (471)
T 3t41_A 398 ---GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------KPFSRYGHGELDVYKA 462 (471)
T ss_dssp ---SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC------------CCHHHHTTCBBCHHHH
T ss_pred ---CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC------------CCcCccccChhCHHHH
Confidence 7899999999999999999999999999 89999999999999997632 3567999999999999
Q ss_pred CCCc
Q 039265 572 NDPG 575 (708)
Q Consensus 572 l~~~ 575 (708)
|+..
T Consensus 463 l~~a 466 (471)
T 3t41_A 463 LNVA 466 (471)
T ss_dssp TTTT
T ss_pred HHHH
Confidence 9853
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.9e-58 Score=519.70 Aligned_cols=364 Identities=21% Similarity=0.219 Sum_probs=62.1
Q ss_pred ceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCHHHHHHHhcCCCeEEEEeceee
Q 039265 4 QTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTEEEVQDMKKKNGFVSARPERKV 83 (708)
Q Consensus 4 ~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~~~i~~L~~~~~V~~V~~~~~~ 83 (708)
++|||+||+......+ +.+.++++..+.+. ....++++.|+.+|+||+++++.+++++|+++|+|++||+++.+
T Consensus 76 g~YIV~lk~~~~~~~~--~~~~~~l~a~~~~~----g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v 149 (692)
T 2p4e_P 76 GTYVVVLKEETHLSQS--ERTARRLQAQAARR----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 149 (692)
T ss_dssp EEEEEEECTTCCHHHH--HHHHHHHHHHHHHT----TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred CcEEEEECCCCCHHHH--HHHHHHHHHHHhhc----ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEecccc
Confidence 5999999998875544 44555555544433 34568999999999999999999999999999999999999987
Q ss_pred cccccCCCcccccccC------CcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeee
Q 039265 84 RLQTTHSPSFLGLHQG------MGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGAR 157 (708)
Q Consensus 84 ~~~~~~s~~~~g~~~~------~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~ 157 (708)
+... ..|++.++ ...|..+.+|+||+|||||||||++||+|.++.. |. .+
T Consensus 150 ~~~~----~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~--------------~~ 205 (692)
T 2p4e_P 150 FAQS----IPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT--------------DF 205 (692)
T ss_dssp EEC-----------------------------------------------------------------------------
T ss_pred ccCC----CCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec--------------cc
Confidence 6521 22555442 2368888999999999999999999999986421 10 01
Q ss_pred ecccC-CCCCCCCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHH
Q 039265 158 TFNIE-GNVKGTEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLD 235 (708)
Q Consensus 158 ~~~~~-~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~ 235 (708)
++..+ ........+.|.+||||||||||+|+. .||||+|+|+.+|+++.. + ++.+++++||+
T Consensus 206 ~~~~d~dg~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~--G~g~~s~ii~aI~ 269 (692)
T 2p4e_P 206 ENVPEEDGTRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQ--GKGTVSGTLIGLE 269 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCCCcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCC--CCCCHHHHHHHHH
Confidence 11100 000001346789999999999999873 699999999999999876 5 67889999999
Q ss_pred HHHHC------CCcEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCc-ccCCCCceEEEcccccCcce
Q 039265 236 AAIED------GVDVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNST-ISNEAPWILTVGASTLDRSI 308 (708)
Q Consensus 236 ~a~~~------g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~-~~~~~p~vitVga~~~~~~~ 308 (708)
|++++ +++|||||||+... ..+..++.++.++|++||+||||+|.+... +|+..|++|+|||++.+...
T Consensus 270 ~a~~~~~~~~~g~~VINmSlGg~~s----~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~ 345 (692)
T 2p4e_P 270 FIRKSQLVQPVGPLVVLLPLAGGYS----RVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhhhhcccCCceEEEecCCCCCc----HHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc
Confidence 99986 89999999997533 455566668889999999999999987644 47889999999996321100
Q ss_pred EEEEEcCCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcC
Q 039265 309 VATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAG 388 (708)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~g 388 (708)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCC
Q 039265 389 GAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGI 468 (708)
Q Consensus 389 a~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~ 468 (708)
...-+.||+|||
T Consensus 346 -------------------------------------------------------------a~~ss~fSn~G~------- 357 (692)
T 2p4e_P 346 -------------------------------------------------------------VTLGTLGTNFGR------- 357 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------cccccccCCCCC-------
Confidence 000123899997
Q ss_pred cCCceeeCCCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccc
Q 039265 469 LKPDIIGPGLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERI 548 (708)
Q Consensus 469 ~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~ 548 (708)
||||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|++||++|++||.+....+..+
T Consensus 358 -~vDI~APG~~I~St~~~~~-------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~~~~~~~ 429 (692)
T 2p4e_P 358 -CVDLFAPGEDIIGASSDCS-------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWF 429 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -ceeEEecCCcEEeeccCCC-------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCCCC
Confidence 4599999999999997532 57999999999999999999999999999999999999999998643222111
Q ss_pred c------ccC---CCCCCCCccCCCC--CCcCCCCC
Q 039265 549 V------DET---LRPADIFAIGAGH--VNPSRAND 573 (708)
Q Consensus 549 ~------~~~---~~~~~~~~~G~G~--vn~~~Al~ 573 (708)
. ... ..+.....+|+|+ .++..+..
T Consensus 430 p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~~~s 465 (692)
T 2p4e_P 430 PEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 465 (692)
T ss_dssp ------------------------------------
T ss_pred ccccCCCCcceeecCCCccccCCCCccccccccccC
Confidence 0 000 1111345678888 77766654
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=3.5e-56 Score=506.36 Aligned_cols=366 Identities=23% Similarity=0.280 Sum_probs=272.2
Q ss_pred CceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCH----HHHHHHh--cCCCeEE
Q 039265 3 LQTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTE----EEVQDMK--KKNGFVS 76 (708)
Q Consensus 3 ~~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~----~~i~~L~--~~~~V~~ 76 (708)
+++|||.||+... . +++++.. +.++.+++. .+++++++++. +.+++|+ ++|+|++
T Consensus 31 ~~~~IV~~k~~~~--------~----~~~~~~~------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~ 91 (671)
T 1r6v_A 31 EGKILVGYNDRSE--------V----DKIVKAV------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRY 91 (671)
T ss_dssp TTEEEEEESSHHH--------H----HHHHHHH------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEE
T ss_pred CccEEEEECCCcC--------H----HHHHHhc------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceE
Confidence 5899999997431 1 2223322 456778887 68899999864 3356676 4799999
Q ss_pred EEeceeeccccc---------------------------CCCccccccc--CCcc-cccCCCCCccEEEEEcCCCCCCCC
Q 039265 77 ARPERKVRLQTT---------------------------HSPSFLGLHQ--GMGV-WKESNFGKGVIIGILDGGINPDHP 126 (708)
Q Consensus 77 V~~~~~~~~~~~---------------------------~s~~~~g~~~--~~~~-~~~g~~G~Gv~VaVIDtGid~~Hp 126 (708)
|||+..+++... .....|++.. +..+ |+. ++|+||+|||||||||++||
T Consensus 92 vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~Hp 170 (671)
T 1r6v_A 92 VEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHP 170 (671)
T ss_dssp EECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSG
T ss_pred EecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCc
Confidence 999976543210 0112355543 3456 888 89999999999999999999
Q ss_pred CCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEe
Q 039265 127 SFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGM 206 (708)
Q Consensus 127 ~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~Gv 206 (708)
+|.++- + ..+++..+...+...+..|.+||||||||||||.. ++.+ +.||
T Consensus 171 dL~~~~-------~--------------~g~~~~~~~~~p~~~d~~d~~gHGThVAGiIAa~~--------ng~g-v~GV 220 (671)
T 1r6v_A 171 DLEGQV-------I--------------AGYRPAFDEELPAGTDSSYGGSAGTHVAGTIAAKK--------DGKG-IVGV 220 (671)
T ss_dssp GGTTTB-------C--------------CEEEGGGTEEECTTCBCCTTCSHHHHHHHHHHCCC--------SSSS-CCCS
T ss_pred cccccE-------E--------------ecccccCCCcCCCCCCCccCCCcchhhhhhhhccC--------CCCc-eEEE
Confidence 998641 1 11111111000001234567899999999999873 1122 3799
Q ss_pred cCCCEEEEEEeeeC----CCCC-CCHHHHHHHHHHHHHCCCcEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCC
Q 039265 207 APYAHLAIYKVCFG----GDVD-CTESDLLAGLDAAIEDGVDVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGN 281 (708)
Q Consensus 207 AP~A~l~~~kv~~~----~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN 281 (708)
||+|+|+.+|+++. ...+ .....+++||+||+++|++|||||||+.. +...+..++.+|.++|+++|+||||
T Consensus 221 AP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~Ai~~A~~~GvlvVaAAGN 297 (671)
T 1r6v_A 221 APGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEAFDYAMEHGVVMVVSAGN 297 (671)
T ss_dssp CTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHHHHHHHhCCCEEEEeCCC
Confidence 99999999999976 1113 44567899999999999999999999753 3457788888999999999999999
Q ss_pred CCCCC-CcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCC
Q 039265 282 SGPFN-STISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGI 360 (708)
Q Consensus 282 ~g~~~-~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 360 (708)
+|... ..+|+..|++|+|||++.+..
T Consensus 298 ~g~~~~~~yPA~~~~VItVgA~d~~g~----------------------------------------------------- 324 (671)
T 1r6v_A 298 NTSDSHHQYPAGYPGVIQVAALDYYGG----------------------------------------------------- 324 (671)
T ss_dssp CSSSCCCCBTTTSTTCEEEEEEEEETT-----------------------------------------------------
T ss_pred CCCCCCccCcccCCCeEEEEEEcCCCC-----------------------------------------------------
Confidence 99875 667888999999999631110
Q ss_pred cccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEe
Q 039265 361 DVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIF 440 (708)
Q Consensus 361 ~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~ 440 (708)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCC-C--------CCCCCcceeeccchhhhHHHH
Q 039265 441 KGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLD-F--------NTNPKSIFNIMSGTSMACPHL 511 (708)
Q Consensus 441 ~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~-~--------~~~~~~~y~~~sGTSmAaP~V 511 (708)
...++.||++||.. ||+|||++|+++++.... . .....+.|..++|||||||||
T Consensus 325 ---------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~V 387 (671)
T 1r6v_A 325 ---------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHV 387 (671)
T ss_dssp ---------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHH
T ss_pred ---------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEecCccHHHHHH
Confidence 01478999999976 999999999999875320 0 011235799999999999999
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcCCCCCCcccccCCC
Q 039265 512 SGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRANDPGLVYDIQP 582 (708)
Q Consensus 512 AG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~ 582 (708)
||+||||+|++|+|++.+||++|++||+++... ..+..||||+||+.+||+..+..+...
T Consensus 388 AGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~-----------g~d~~~G~G~vna~~Al~~~l~~~~~~ 447 (671)
T 1r6v_A 388 TGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN-----------GWDHDTGYGLVKLDAALQGPLPTQGGV 447 (671)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS-----------SCBTTTBTCBCCHHHHHHCCCCSSSEE
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC-----------CCCCCcccceeCHHHHhhhhcCCCCCc
Confidence 999999999999999999999999999987432 345789999999999999877665443
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.2e-55 Score=486.07 Aligned_cols=383 Identities=25% Similarity=0.352 Sum_probs=276.6
Q ss_pred ccccc--CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCC
Q 039265 94 LGLHQ--GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPP 171 (708)
Q Consensus 94 ~g~~~--~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~ 171 (708)
|++++ ++.+|+.+ |+||+|||||||||++||+|.++ ++..+++....+ ...+
T Consensus 6 W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~---------------------~~~~~~~~~~~~---~~~~ 59 (441)
T 1y9z_A 6 WGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN---------------------NVTGTNNSGTGN---WYQP 59 (441)
T ss_dssp HHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS---------------------EEEECCCTTSCC---TTCC
T ss_pred CChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC---------------------cccCcccCCCCC---CCCC
Confidence 55544 45688865 78999999999999999999753 112222221100 2356
Q ss_pred CCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCC--EEEEEEeeeCCCCC-CCHHHHHHHHHHHHHC-CCcEEEE
Q 039265 172 IDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYA--HLAIYKVCFGGDVD-CTESDLLAGLDAAIED-GVDVLSI 247 (708)
Q Consensus 172 ~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A--~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~-g~dVIn~ 247 (708)
.|..||||||||||+|... +.+ +.||||+| +|+.+|+++.. + +..+++++||+||+++ |++||||
T Consensus 60 ~d~~gHGT~vAgiia~~~~--------~~g-~~GvAP~a~~~l~~~kv~~~~--g~~~~~~~~~ai~~a~~~~g~~Vin~ 128 (441)
T 1y9z_A 60 GNNNAHGTHVAGTIAAIAN--------NEG-VVGVMPNQNANIHIVKVFNEA--GWGYSSSLVAAIDTCVNSGGANVVTM 128 (441)
T ss_dssp CSSCCHHHHHHHHHHCCCS--------SSB-CCCSSCSSCSEEEEEECEETT--EECCSSCHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCCcHHHHHHHHhcccC--------CCC-ceEecCCCCCEEEEEEEeCCC--CCcCHHHHHHHHHHHHHhcCCcEEEe
Confidence 7889999999999999742 122 48999995 99999999876 6 7788999999999999 9999999
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceE------------------
Q 039265 248 SIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIV------------------ 309 (708)
Q Consensus 248 S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~------------------ 309 (708)
|||.... ...+..++.++.++|++||+||||+|.....+++..+++|+|||++.+....
T Consensus 129 S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i 205 (441)
T 1y9z_A 129 SLGGSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAI 205 (441)
T ss_dssp CCCBSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSE
T ss_pred CCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCe
Confidence 9997632 2456777888999999999999999998888999999999999987654321
Q ss_pred -EEEEcCCCc----eeeeeeccCCCCCCCC-cee--EEEecCC--C--CCCCCccCCC--CCCCCcccCcEEEeecCCCc
Q 039265 310 -ATAKLGNRE----EFDGESVFQPKDFPQT-PLP--LVYAGMN--G--KPESAFCGNG--SLSGIDVKGKVVLCERGGGI 375 (708)
Q Consensus 310 -~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~--~~~~~~~--~--~~~~~~c~~~--~~~~~~~~g~ivl~~~g~~~ 375 (708)
.....+++. .+.+.++|....++.. .++ ..+.... + ......|... .+...+++|||++|.|+ .|
T Consensus 206 ~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg-~~ 284 (441)
T 1y9z_A 206 LSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERV-GN 284 (441)
T ss_dssp EEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECC-SC
T ss_pred eccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEecc-cc
Confidence 111111111 1222232211100000 000 0111000 0 0112347543 45678899999999998 54
Q ss_pred -----chhhHHHHHHHcCCcEEEEecCCCCCc------ccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceE
Q 039265 376 -----ARIFKGEQVKNAGGAAMILMNDEPNAF------SVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTV 444 (708)
Q Consensus 376 -----~~~~k~~~~~~~ga~~~i~~~~~~~~~------~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~ 444 (708)
.+.+|..+++++|+.++|++++..... ......+.+|.+.++..+|+.|++++.+. .
T Consensus 285 ~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~-------- 352 (441)
T 1y9z_A 285 QGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----T-------- 352 (441)
T ss_dssp SSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----E--------
T ss_pred CcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----c--------
Confidence 788999999999999999998754211 11223567999999999999998876321 0
Q ss_pred eCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCC
Q 039265 445 IGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPY 524 (708)
Q Consensus 445 ~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ 524 (708)
.+ ++... +.|..++|||||||||||++|||+|+||+
T Consensus 353 ---------------------------t~--------~~~~~---------~~y~~~sGTSmAaP~VAG~aALl~~~~p~ 388 (441)
T 1y9z_A 353 ---------------------------TV--------SNQGN---------QDYEYYNGTSMATPHVSGVATLVWSYHPE 388 (441)
T ss_dssp ---------------------------EE--------EEEEE---------ESEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred ---------------------------cc--------ccccC---------CCceeecccccCCcccchHHHHHHHHCCC
Confidence 01 11222 78999999999999999999999999999
Q ss_pred CCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcCCCCCCcccccCCCCCcccccccCCCC
Q 039265 525 WSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYS 595 (708)
Q Consensus 525 ~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~~~~ 595 (708)
|+|++||++||+||++++..+ .+.+||+|+||+.+|+ ||+.|+|..++.
T Consensus 389 ~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~ 437 (441)
T 1y9z_A 389 CSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK-----------AYLDESCTGPTD 437 (441)
T ss_dssp SCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH-----------HHHHHCTTCC--
T ss_pred CCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH-----------HHHHhhhcCCCC
Confidence 999999999999999885432 3568999999999997 488899998653
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=2.6e-53 Score=438.13 Aligned_cols=262 Identities=33% Similarity=0.492 Sum_probs=223.8
Q ss_pred cccccc--CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCC
Q 039265 93 FLGLHQ--GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEP 170 (708)
Q Consensus 93 ~~g~~~--~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~ 170 (708)
.|++.. ++.+|..+++|+||+|+|||||| .+||+|+ +...++|..+ ...
T Consensus 5 ~W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------~~~~~~~~~~-----~~~ 55 (269)
T 1gci_A 5 PWGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------IRGGASFVPG-----EPS 55 (269)
T ss_dssp CHHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------EEEEEECSTT-----CCS
T ss_pred CcChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------ccCCcccCCC-----CCC
Confidence 355544 45689999999999999999999 8999994 2345566643 234
Q ss_pred CCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHCCCcEEEEcc
Q 039265 171 PIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIEDGVDVLSISI 249 (708)
Q Consensus 171 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~ 249 (708)
+.|..||||||||||+|... ..+ +.||||+|+|+.+|+++.. + +..+++++||+||++++++||||||
T Consensus 56 ~~d~~gHGT~vAgiia~~~~--------~~~-~~GvAp~a~l~~~~v~~~~--g~~~~~~~~~ai~~a~~~~~~Vin~S~ 124 (269)
T 1gci_A 56 TQDGNGHGTHVAGTIAALNN--------SIG-VLGVAPSAELYAVKVLGAS--GSGSVSSIAQGLEWAGNNGMHVANLSL 124 (269)
T ss_dssp CSCSSSHHHHHHHHHHCCCS--------SSB-CCCSSTTCEEEEEECBCTT--SCBCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCChHHHHHHHhcCcC--------CCC-cEEeCCCCEEEEEEeECCC--CCcCHHHHHHHHHHHHHCCCeEEEeCC
Confidence 67899999999999998731 112 3799999999999999876 5 6788999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCC
Q 039265 250 GGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPK 329 (708)
Q Consensus 250 G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (708)
|.... ...+..++.++.++|+++|+||||+|.....+|+..+++|+||+++.
T Consensus 125 G~~~~---~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------- 176 (269)
T 1gci_A 125 GSPSP---SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------------------- 176 (269)
T ss_dssp CBSSC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------------------
T ss_pred CCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-------------------------
Confidence 98632 35777888889999999999999999988888999999999999521
Q ss_pred CCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCc
Q 039265 330 DFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPH 409 (708)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 409 (708)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCC
Q 039265 410 VLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLD 489 (708)
Q Consensus 410 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~ 489 (708)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 177 ----------------------------------------~~~~~~~S~~G~~~--------di~APG~~i~s~~~~--- 205 (269)
T 1gci_A 177 ----------------------------------------NNNRASFSQYGAGL--------DIVAPGVNVQSTYPG--- 205 (269)
T ss_dssp ----------------------------------------TSCBCTTCCCSTTE--------EEEEECSSEEEEETT---
T ss_pred ----------------------------------------CCCCCCCCCCCCCc--------ceEecCCCeEeecCC---
Confidence 12678899999865 999999999999986
Q ss_pred CCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcC
Q 039265 490 FNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPS 569 (708)
Q Consensus 490 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~ 569 (708)
+.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. .+..||+|+||+.
T Consensus 206 ------~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------------~~~~~G~G~vn~~ 265 (269)
T 1gci_A 206 ------STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------------STNLYGSGLVNAE 265 (269)
T ss_dssp ------TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS--------------CHHHHTTCBCCHH
T ss_pred ------CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC--------------CCCCcccCccCHH
Confidence 78999999999999999999999999999999999999999999873 3468999999999
Q ss_pred CCCC
Q 039265 570 RAND 573 (708)
Q Consensus 570 ~Al~ 573 (708)
+||+
T Consensus 266 ~A~~ 269 (269)
T 1gci_A 266 AATR 269 (269)
T ss_dssp HHTC
T ss_pred HHcC
Confidence 9985
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=2.4e-53 Score=440.17 Aligned_cols=262 Identities=32% Similarity=0.493 Sum_probs=221.6
Q ss_pred ccccc--CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCC
Q 039265 94 LGLHQ--GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPP 171 (708)
Q Consensus 94 ~g~~~--~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~ 171 (708)
|+++. ++.+|..+++|+||+|+|||||||++||+|+ +...++|..+ ....
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------~~~g~~~~~~-----~~~~ 57 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------VVGGASFVAG-----EAYN 57 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------EEEEEECSTT-----CCTT
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------CCCCccccCC-----CCCC
Confidence 55544 4568999999999999999999999999994 2334556543 2345
Q ss_pred CCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHCCCcEEEEccC
Q 039265 172 IDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIEDGVDVLSISIG 250 (708)
Q Consensus 172 ~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~G 250 (708)
.|..||||||||||+|... ..+ +.||||+|+|+.+|+++.. + +..+++++||+||++++++|||||||
T Consensus 58 ~d~~gHGT~vAgiia~~~~--------~~g-~~GvAp~a~l~~~~v~~~~--g~~~~~~i~~ai~~a~~~~~~Vin~S~G 126 (274)
T 1r0r_E 58 TDGNGHGTHVAGTVAALDN--------TTG-VLGVAPSVSLYAVKVLNSS--GSGSYSGIVSGIEWATTNGMDVINMSLG 126 (274)
T ss_dssp CCSSSHHHHHHHHHHCCSS--------SSB-CCCSSTTSEEEEEECSCTT--SEECHHHHHHHHHHHHHTTCSEEEECEE
T ss_pred CCCCCCHHHHHHHHHccCC--------CCc-eEEECCCCEEEEEEEECCC--CCccHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 7889999999999998631 112 3799999999999999876 5 67889999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCC----CCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeecc
Q 039265 251 GGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPF----NSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVF 326 (708)
Q Consensus 251 ~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~----~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (708)
.... ...+..++.++.++|+++|+||||+|.. ...+|+..+++|+||+.+.
T Consensus 127 ~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~---------------------- 181 (274)
T 1r0r_E 127 GASG---STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS---------------------- 181 (274)
T ss_dssp BSSC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT----------------------
T ss_pred CCCC---cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC----------------------
Confidence 8632 4577888889999999999999999976 3456788899999998521
Q ss_pred CCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCccccc
Q 039265 327 QPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIA 406 (708)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~ 406 (708)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecC
Q 039265 407 DPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFE 486 (708)
Q Consensus 407 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~ 486 (708)
.+.++.||++||. |||+|||.+|+++++.
T Consensus 182 -------------------------------------------~~~~~~~S~~G~~--------~di~APG~~i~s~~~~ 210 (274)
T 1r0r_E 182 -------------------------------------------NSNRASFSSVGAE--------LEVMAPGAGVYSTYPT 210 (274)
T ss_dssp -------------------------------------------TSCBCTTCCCSTT--------EEEEEECSSEEEEETT
T ss_pred -------------------------------------------CCCcCccCCCCCC--------ceEEeCCCCeEeecCC
Confidence 1267889999985 4999999999999986
Q ss_pred CCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCC
Q 039265 487 PLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHV 566 (708)
Q Consensus 487 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~v 566 (708)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++. ++..||+|+|
T Consensus 211 ---------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~~ 267 (274)
T 1r0r_E 211 ---------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG--------------SSFYYGKGLI 267 (274)
T ss_dssp ---------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--------------CHHHHTTCBC
T ss_pred ---------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--------------CCCCcccCcc
Confidence 78999999999999999999999999999999999999999999862 3468999999
Q ss_pred CcCCCCC
Q 039265 567 NPSRAND 573 (708)
Q Consensus 567 n~~~Al~ 573 (708)
|+.+|++
T Consensus 268 ~~~~A~~ 274 (274)
T 1r0r_E 268 NVEAAAQ 274 (274)
T ss_dssp CHHHHTC
T ss_pred CHHHHhC
Confidence 9999985
No 12
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=8.1e-53 Score=437.34 Aligned_cols=265 Identities=29% Similarity=0.415 Sum_probs=217.2
Q ss_pred cccccc--CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCC
Q 039265 93 FLGLHQ--GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEP 170 (708)
Q Consensus 93 ~~g~~~--~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~ 170 (708)
+|++.. +..+|+.+..|+||+|||||||||++||+|.++ ++..++|... ...
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------~~~~~~~~~~-----~~~ 65 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------VIKGYDFVDN-----DYD 65 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------EEEEEETTTT-----BSC
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------cccceeccCC-----CCC
Confidence 455554 356999987788999999999999999999753 4556677654 345
Q ss_pred CCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHCCCcEEEEcc
Q 039265 171 PIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIEDGVDVLSISI 249 (708)
Q Consensus 171 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~ 249 (708)
+.|..+|||||||||+|...+. .+ +.||||+|+|+.+|+++.. + +..+++++||+||+++|++||||||
T Consensus 66 ~~d~~gHGT~vAgiia~~~~~~-------~g-~~GvAp~a~l~~~kv~~~~--g~~~~~~i~~ai~~a~~~g~~Vin~S~ 135 (280)
T 1dbi_A 66 PMDLNNHGTHVAGIAAAETNNA-------TG-IAGMAPNTRILAVRALDRN--GSGTLSDIADAIIYAADSGAEVINLSL 135 (280)
T ss_dssp CCCSSSHHHHHHHHHHCCCSSS-------SS-CCCSSSSCEEEEEECCCTT--SCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCcHHHHHHHHhCcCCCC-------Cc-ceEeCCCCEEEEEEEECCC--CCcCHHHHHHHHHHHHHCCCCEEEeCC
Confidence 6789999999999999975322 12 3799999999999999876 5 7788999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCC
Q 039265 250 GGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPK 329 (708)
Q Consensus 250 G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (708)
|... ....+..++.++.++|+++|+||||+|.....+++..+++|+|||++.
T Consensus 136 G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------- 187 (280)
T 1dbi_A 136 GCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ------------------------- 187 (280)
T ss_dssp SSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-------------------------
T ss_pred CCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-------------------------
Confidence 9863 245777888899999999999999999888888899999999999521
Q ss_pred CCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCc
Q 039265 330 DFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPH 409 (708)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 409 (708)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCC
Q 039265 410 VLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLD 489 (708)
Q Consensus 410 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~ 489 (708)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 188 ----------------------------------------~~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~--- 216 (280)
T 1dbi_A 188 ----------------------------------------YDRLASFSNYGTWV--------DVVAPGVDIVSTITG--- 216 (280)
T ss_dssp ----------------------------------------TSCBCTTBCCSTTC--------CEEEECSSEEEEETT---
T ss_pred ----------------------------------------CCCcCCCCCCCCCc--------eEEEecCCeEeecCC---
Confidence 12678899999865 999999999999976
Q ss_pred CCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcC
Q 039265 490 FNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPS 569 (708)
Q Consensus 490 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~ 569 (708)
+.|..++|||||||||||++|||++ |.+++.+||++|++||+++.. ....||+|+||+.
T Consensus 217 ------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------------~~~~~G~G~vn~~ 275 (280)
T 1dbi_A 217 ------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------------TGTYFKYGRINSY 275 (280)
T ss_dssp ------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT-------------BTTTBSSEECCHH
T ss_pred ------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC-------------CCCcccCCEECHH
Confidence 7899999999999999999999987 899999999999999998742 2257999999999
Q ss_pred CCCC
Q 039265 570 RAND 573 (708)
Q Consensus 570 ~Al~ 573 (708)
+||+
T Consensus 276 ~A~~ 279 (280)
T 1dbi_A 276 NAVT 279 (280)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9986
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=9.8e-53 Score=436.94 Aligned_cols=265 Identities=34% Similarity=0.517 Sum_probs=222.5
Q ss_pred cccccc--CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCC
Q 039265 93 FLGLHQ--GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEP 170 (708)
Q Consensus 93 ~~g~~~--~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~ 170 (708)
.|+++. +..+|..+++|+||+|||||||||++||+|+ +...++|..+. ..+
T Consensus 5 ~w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------~~~g~~~~~~~----~~~ 57 (281)
T 1to2_E 5 PYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLK-----------------------VAGGASMVPSE----TNP 57 (281)
T ss_dssp CHHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------EEEEEECCTTC----CCT
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc-----------------------CcCCccccCCC----CCC
Confidence 356554 3568999999999999999999999999995 22344555321 122
Q ss_pred CCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHCCCcEEEEcc
Q 039265 171 PIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIEDGVDVLSISI 249 (708)
Q Consensus 171 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~ 249 (708)
..|..||||||||||+|... ..+ +.||||+|+|+.+|+++.. + +..++++++|+|+++++++||||||
T Consensus 58 ~~d~~gHGT~vAgiia~~~~--------~~g-~~GvAp~a~l~~~kv~~~~--g~~~~~~i~~ai~~a~~~~~~Vin~S~ 126 (281)
T 1to2_E 58 FQDNNSHGTHVAGTVAALNN--------SIG-VLGVAPSASLYAVKVLGAD--GSGQYSWIINGIEWAIANNMDVINMSL 126 (281)
T ss_dssp TCCSSSHHHHHHHHHHCCSS--------SSS-BCCSSTTSEEEEEECSCTT--SEECHHHHHHHHHHHHHTTCSEEEECE
T ss_pred CCCCCCcHHHHHHHHhccCC--------CCc-ceeeCCCCEEEEEEEeCCC--CCccHHHHHHHHHHHHHCCCcEEEECC
Confidence 46889999999999998731 112 3799999999999999876 5 6788999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCC----CCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeec
Q 039265 250 GGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPF----NSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESV 325 (708)
Q Consensus 250 G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~----~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~ 325 (708)
|... ....+..++.++.++|+++|+||||+|.. ...+|+..|++|+|||.+.
T Consensus 127 G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--------------------- 182 (281)
T 1to2_E 127 GGPS---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS--------------------- 182 (281)
T ss_dssp EBSC---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT---------------------
T ss_pred cCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC---------------------
Confidence 9863 24577888889999999999999999976 3456788899999998521
Q ss_pred cCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccc
Q 039265 326 FQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVI 405 (708)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~ 405 (708)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeec
Q 039265 406 ADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWF 485 (708)
Q Consensus 406 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~ 485 (708)
.+.++.||++||.. ||+|||.+|+++++
T Consensus 183 --------------------------------------------~~~~~~fS~~G~~~--------di~APG~~i~s~~~ 210 (281)
T 1to2_E 183 --------------------------------------------SNQRASFSSVGPEL--------DVMAPGVSIQSTLP 210 (281)
T ss_dssp --------------------------------------------TSCBCTTCCCSTTC--------CEEEECSSEEEEET
T ss_pred --------------------------------------------CCCcCCcCCCCCCc--------eEEecCCCeEeecC
Confidence 12678899999864 99999999999998
Q ss_pred CCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCC
Q 039265 486 EPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGH 565 (708)
Q Consensus 486 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~ 565 (708)
. +.|..++|||||||+|||++|||+|++|+|++++||++|++||+++. ++..||||+
T Consensus 211 ~---------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~ 267 (281)
T 1to2_E 211 G---------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG--------------DSFYYGKGL 267 (281)
T ss_dssp T---------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------------CHHHHTTCB
T ss_pred C---------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC--------------CCCCcccce
Confidence 6 78999999999999999999999999999999999999999999873 346899999
Q ss_pred CCcCCCCCC
Q 039265 566 VNPSRANDP 574 (708)
Q Consensus 566 vn~~~Al~~ 574 (708)
||+.+|+++
T Consensus 268 v~~~~a~~~ 276 (281)
T 1to2_E 268 INVQAAAQH 276 (281)
T ss_dssp CCHHHHTSS
T ss_pred ecHHHHhhh
Confidence 999999985
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=3.7e-52 Score=432.36 Aligned_cols=264 Identities=31% Similarity=0.444 Sum_probs=223.7
Q ss_pred cccccc--CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCC
Q 039265 93 FLGLHQ--GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEP 170 (708)
Q Consensus 93 ~~g~~~--~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~ 170 (708)
+|+++. +..+|+.. +|+||+|||||||||++||+|.++ +...++|..+ ...
T Consensus 12 ~w~l~~i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------~~~~~~~~~~-----~~~ 64 (279)
T 1thm_A 12 QYGPQKIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK---------------------VVGGWDFVDN-----DST 64 (279)
T ss_dssp CCHHHHTTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT---------------------EEEEEETTTT-----BSC
T ss_pred ccChhhCChHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC---------------------ccccccccCC-----CCC
Confidence 355543 45689887 799999999999999999999753 5556677654 345
Q ss_pred CCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHCCCcEEEEcc
Q 039265 171 PIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIEDGVDVLSISI 249 (708)
Q Consensus 171 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~g~dVIn~S~ 249 (708)
+.|..||||||||||+|...+. .+ +.||||+|+|+.+|+++.. + +...++++||+||+++|++||||||
T Consensus 65 ~~d~~gHGT~vAgiia~~~~n~-------~g-~~GvAp~a~l~~~~v~~~~--g~~~~~~~~~ai~~a~~~g~~Vin~S~ 134 (279)
T 1thm_A 65 PQNGNGHGTHCAGIAAAVTNNS-------TG-IAGTAPKASILAVRVLDNS--GSGTWTAVANGITYAADQGAKVISLSL 134 (279)
T ss_dssp CCCSSSHHHHHHHHHHCCCSSS-------SS-CCCSSTTCEEEEEECSCTT--SCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCcHHHHHHHHhCccCCC-------Cc-cEEeCCCCEEEEEEeeCCC--CCccHHHHHHHHHHHHHCCCCEEEEec
Confidence 6789999999999999975322 12 3799999999999999876 5 6788999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCC
Q 039265 250 GGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPK 329 (708)
Q Consensus 250 G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (708)
|... ....+..++.++.++|+++|+||||+|.....+++..+++|+||+++.
T Consensus 135 G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------- 186 (279)
T 1thm_A 135 GGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------------------- 186 (279)
T ss_dssp CBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-------------------------
T ss_pred CCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-------------------------
Confidence 9863 245777888899999999999999999988888999999999998521
Q ss_pred CCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCc
Q 039265 330 DFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPH 409 (708)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 409 (708)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCC
Q 039265 410 VLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLD 489 (708)
Q Consensus 410 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~ 489 (708)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 187 ----------------------------------------~~~~~~fS~~G~~~--------dv~APG~~i~s~~~~--- 215 (279)
T 1thm_A 187 ----------------------------------------NDNKSSFSTYGSWV--------DVAAPGSSIYSTYPT--- 215 (279)
T ss_dssp ----------------------------------------TSCBCTTCCCCTTC--------CEEEECSSEEEEETT---
T ss_pred ----------------------------------------CCCcCCcCCCCCce--------EEEEcCCCeEEEeCC---
Confidence 12678899999865 999999999999986
Q ss_pred CCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcC
Q 039265 490 FNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPS 569 (708)
Q Consensus 490 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~ 569 (708)
+.|..++|||||||||||++||| ++|.+++++||++|++||+++... ...||+|+||+.
T Consensus 216 ------~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-------------~~~~G~G~vn~~ 274 (279)
T 1thm_A 216 ------STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-------------GTYWAKGRVNAY 274 (279)
T ss_dssp ------TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-------------TTTBSSEECCHH
T ss_pred ------CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-------------CccccCCeeCHH
Confidence 78999999999999999999999 479999999999999999987532 147899999999
Q ss_pred CCCC
Q 039265 570 RAND 573 (708)
Q Consensus 570 ~Al~ 573 (708)
+||+
T Consensus 275 ~A~~ 278 (279)
T 1thm_A 275 KAVQ 278 (279)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9875
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.5e-52 Score=444.80 Aligned_cols=272 Identities=28% Similarity=0.442 Sum_probs=221.4
Q ss_pred ccccccc--CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCC
Q 039265 92 SFLGLHQ--GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTE 169 (708)
Q Consensus 92 ~~~g~~~--~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~ 169 (708)
..|+++. ++.+|+.+++|+||+|||||||||++||+|.++ +...++|..+++.. ..
T Consensus 21 ~~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~---------------------~~~~~~~~~~~~~~-~~ 78 (327)
T 2x8j_A 21 VPMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAER---------------------IIGGVNLTTDYGGD-ET 78 (327)
T ss_dssp CCHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG---------------------EEEEEECSSGGGGC-TT
T ss_pred cCcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc---------------------ccCCccccCCCCCC-CC
Confidence 3466654 456999999999999999999999999999743 55556666432111 22
Q ss_pred CCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHH------CCC
Q 039265 170 PPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIE------DGV 242 (708)
Q Consensus 170 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~------~g~ 242 (708)
...|..||||||||||+|... +.+ +.||||+|+|+.+|+++.. + +..+++++||+||++ .++
T Consensus 79 ~~~d~~gHGT~VAgiia~~~~--------~~g-~~GvAp~a~l~~~kv~~~~--g~~~~~~i~~ai~~a~~~~~~~~~~~ 147 (327)
T 2x8j_A 79 NFSDNNGHGTHVAGTVAAAET--------GSG-VVGVAPKADLFIIKALSGD--GSGEMGWIAKAIRYAVDWRGPKGEQM 147 (327)
T ss_dssp CCCCSSSHHHHHHHHHHCCCC--------SSB-CCCSSTTCEEEEEECSCTT--SEECHHHHHHHHHHHHHCCCTTSCCC
T ss_pred CCCCCCCchHHHHHHHhccCC--------CCC-cEeeCCCCEEEEEEeECCC--CCcCHHHHHHHHHHHHhhcccccCCc
Confidence 457899999999999998731 122 3899999999999999876 5 678899999999999 899
Q ss_pred cEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCC-----CCcccCCCCceEEEcccccCcceEEEEEcCCC
Q 039265 243 DVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPF-----NSTISNEAPWILTVGASTLDRSIVATAKLGNR 317 (708)
Q Consensus 243 dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~-----~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~ 317 (708)
+|||||||... ....+..++.++.++|++||+||||+|.. ...+|+..+++|+|||++.
T Consensus 148 ~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~------------- 211 (327)
T 2x8j_A 148 RIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF------------- 211 (327)
T ss_dssp SEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT-------------
T ss_pred eEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC-------------
Confidence 99999999863 24567788888999999999999999975 2456788899999999521
Q ss_pred ceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecC
Q 039265 318 EEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMND 397 (708)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~ 397 (708)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCC
Q 039265 398 EPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPG 477 (708)
Q Consensus 398 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG 477 (708)
.+.++.||++||. |||+|||
T Consensus 212 ----------------------------------------------------~~~~~~fS~~G~~--------~di~APG 231 (327)
T 2x8j_A 212 ----------------------------------------------------DLRLSDFTNTNEE--------IDIVAPG 231 (327)
T ss_dssp ----------------------------------------------------TCCBSCC---CCC--------CSEEEEC
T ss_pred ----------------------------------------------------CCCCCCccCCCCC--------ceEecCc
Confidence 1267899999985 4999999
Q ss_pred CcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhc-----CCCCCHHHHHHHHHccccccccCCccccccC
Q 039265 478 LSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSS-----HPYWSPAAIKSALMTTADLLNMNGERIVDET 552 (708)
Q Consensus 478 ~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~ 552 (708)
++|+++++. +.|..++|||||||+|||++|||+|+ +|.+++.+||++|++||+++.
T Consensus 232 ~~i~s~~~~---------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g---------- 292 (327)
T 2x8j_A 232 VGIKSTYLD---------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG---------- 292 (327)
T ss_dssp SSEEEECST---------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS----------
T ss_pred CceEeecCC---------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC----------
Confidence 999999876 78999999999999999999999999 999999999999999999863
Q ss_pred CCCCCCCccCCCCCCcCCCCCC
Q 039265 553 LRPADIFAIGAGHVNPSRANDP 574 (708)
Q Consensus 553 ~~~~~~~~~G~G~vn~~~Al~~ 574 (708)
.++..||+|+||+.+|++.
T Consensus 293 ---~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 293 ---FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp ---SCHHHHTTCEECTTHHHHH
T ss_pred ---CCCCceeeeEECHHHHHHh
Confidence 2457999999999999973
No 16
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.1e-53 Score=459.44 Aligned_cols=297 Identities=21% Similarity=0.212 Sum_probs=197.6
Q ss_pred CcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCC-----Ccee----EeeeecccC-CC-CCCC
Q 039265 100 MGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTC-----NNKL----IGARTFNIE-GN-VKGT 168 (708)
Q Consensus 100 ~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~-----~~kv----~g~~~~~~~-~~-~~~~ 168 (708)
.++|+++..|+||+|||||||||++||+|.+....+....|+..++.... +..+ ...+.+... .. .++.
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVIPDT 100 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHCTTT
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccccCCC
Confidence 45999999999999999999999999999987776677778766553200 0000 000000000 00 0002
Q ss_pred CCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCC---CC-CCHHHHHHHHHHHHHCCCcE
Q 039265 169 EPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGD---VD-CTESDLLAGLDAAIEDGVDV 244 (708)
Q Consensus 169 ~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~---~g-~~~~~i~~ai~~a~~~g~dV 244 (708)
.++.|.+||||||||||||+... .+.||||+|+|+.+|++.... .+ ....+++++|+||+++|++|
T Consensus 101 ~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~V 170 (357)
T 4h6x_A 101 KDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANI 170 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSE
T ss_pred CCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCE
Confidence 23456789999999999987421 247999999999999975431 01 34567889999999999999
Q ss_pred EEEccCCCC-CCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEcCCCceeeee
Q 039265 245 LSISIGGGS-VPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGE 323 (708)
Q Consensus 245 In~S~G~~~-~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~ 323 (708)
||||||... .....+.+..++.++.++|+++|+||||+|.....+|+..|++|+|||++.
T Consensus 171 in~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------- 231 (357)
T 4h6x_A 171 IHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV------------------- 231 (357)
T ss_dssp EEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-------------------
T ss_pred EeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-------------------
Confidence 999999764 234557788888899999999999999999988889999999999999521
Q ss_pred eccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcc
Q 039265 324 SVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFS 403 (708)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~ 403 (708)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEee
Q 039265 404 VIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAA 483 (708)
Q Consensus 404 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa 483 (708)
.+.++.||+||+. ..||||+|||.+|+++
T Consensus 232 ----------------------------------------------~~~~~~fSn~G~~-----~~~~di~APG~~i~s~ 260 (357)
T 4h6x_A 232 ----------------------------------------------DGTPCHFSNWGGN-----NTKEGILAPGEEILGA 260 (357)
T ss_dssp ----------------------------------------------TSSBCTTCC---C-----TTTTEEEEECSSEEEC
T ss_pred ----------------------------------------------CCcccccccCCCC-----CCccceeecCCCeEec
Confidence 2367899999975 4689999999999999
Q ss_pred ecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHh----cCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCC
Q 039265 484 WFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKS----SHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIF 559 (708)
Q Consensus 484 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~ 559 (708)
++.. +.|..++|||||||||||++|||++ ++|.|+++|||++|++||++++... ...+.
T Consensus 261 ~~~~--------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~---------~~~~~ 323 (357)
T 4h6x_A 261 QPCT--------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV---------VEEPE 323 (357)
T ss_dssp CTTC--------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC----------------------
T ss_pred cCCC--------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCcc
Confidence 8762 5677899999999999999999995 4678999999999999999875321 23457
Q ss_pred ccCCCCCCcCCCCC
Q 039265 560 AIGAGHVNPSRAND 573 (708)
Q Consensus 560 ~~G~G~vn~~~Al~ 573 (708)
+||+|+||+.+|++
T Consensus 324 ~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 324 RCLRGFVNIPGAMK 337 (357)
T ss_dssp -CTTCBCCHHHHHH
T ss_pred cceeEEecHHHHHH
Confidence 89999999999997
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=4.1e-51 Score=432.11 Aligned_cols=287 Identities=29% Similarity=0.407 Sum_probs=229.4
Q ss_pred cccccc--CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCC
Q 039265 93 FLGLHQ--GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEP 170 (708)
Q Consensus 93 ~~g~~~--~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~ 170 (708)
.|+++. +..+|..+++|+||+|||||||||++||+|.++ +...++|....... ...
T Consensus 7 ~W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------~~~~~~~~~~~~~~-~~~ 64 (310)
T 2ixt_A 7 PWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------VEQCKDFTGATTPI-NNS 64 (310)
T ss_dssp CHHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------EEEEEESSSSSSCE-ETC
T ss_pred CCchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------ccccccccCCCCCC-CCC
Confidence 355544 577999999999999999999999999999753 44456666431100 234
Q ss_pred CCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHCCC-----cE
Q 039265 171 PIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIEDGV-----DV 244 (708)
Q Consensus 171 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~g~-----dV 244 (708)
..|..||||||||||+|.... +...+.||||+|+|+.+|++.+. + +..+++++||+||+++++ +|
T Consensus 65 ~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~--g~~~~~~~~~ai~~a~~~~~~~~~~~V 135 (310)
T 2ixt_A 65 CTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDS--GSGYSDDIAAAIRHAADQATATGTKTI 135 (310)
T ss_dssp CCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTT--SCCCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCC--CCCcHHHHHHHHHHHHHhhhccCCCeE
Confidence 578899999999999987421 11224899999999999999876 5 678899999999999988 99
Q ss_pred EEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCC--CCcccCCCCceEEEcccccCcceEEEEEcCCCceeee
Q 039265 245 LSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPF--NSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDG 322 (708)
Q Consensus 245 In~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~--~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~ 322 (708)
||||||... ....+..++.++.++|++||+||||+|.. ...+|+..+++|+|||.+...
T Consensus 136 in~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~---------------- 196 (310)
T 2ixt_A 136 ISMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ---------------- 196 (310)
T ss_dssp EEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE----------------
T ss_pred EEEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc----------------
Confidence 999999863 24567788888999999999999999976 456788889999999953100
Q ss_pred eeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCc
Q 039265 323 ESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAF 402 (708)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~ 402 (708)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCC--ccccccCCCCCCCC----CCCcCCceeeC
Q 039265 403 SVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAP--TVVSFSSRGPNLAS----PGILKPDIIGP 476 (708)
Q Consensus 403 ~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSs~Gp~~~~----~g~~KPDI~AP 476 (708)
..+ .++.||++||.... .++.||||+||
T Consensus 197 ----------------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~Ap 230 (310)
T 2ixt_A 197 ----------------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAP 230 (310)
T ss_dssp ----------------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEE
T ss_pred ----------------------------------------------cCCCeeeccccCCCCccCCccccccCCCeeEECC
Confidence 011 57789999985421 12459999999
Q ss_pred CCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCC
Q 039265 477 GLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPA 556 (708)
Q Consensus 477 G~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~ 556 (708)
|.+|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||++++..+. ....+.
T Consensus 231 G~~i~s~~~~---------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~----~~a~~g 297 (310)
T 2ixt_A 231 GSSVYSTWYN---------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG----YGAAIG 297 (310)
T ss_dssp CSSEEEECTT---------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS----TTCCSS
T ss_pred CCCEeeecCC---------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC----cccccC
Confidence 9999999876 789999999999999999999999999999999999999999998764321 112456
Q ss_pred CCCccCCCCCCc
Q 039265 557 DIFAIGAGHVNP 568 (708)
Q Consensus 557 ~~~~~G~G~vn~ 568 (708)
.+..+|||++|+
T Consensus 298 ~d~~~G~G~~~v 309 (310)
T 2ixt_A 298 DDYASGFGFARV 309 (310)
T ss_dssp SBTTTBTCBCCC
T ss_pred Cccccccceeec
Confidence 778999999996
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=5.3e-52 Score=432.76 Aligned_cols=266 Identities=26% Similarity=0.302 Sum_probs=212.9
Q ss_pred CCCC-CccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCChHHHHHH
Q 039265 106 SNFG-KGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHGTHVAGT 184 (708)
Q Consensus 106 g~~G-~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGThVAGi 184 (708)
.++| +||+|||||||||++||+|.++ .+..+++..... .....|.+|||||||||
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~---------------------~~~~~~~~~~~~---~~~d~~~~gHGT~VAGi 58 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA---------------------DLTVLPTLAPTA---ARSDGFMSAHGTHVASI 58 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC---------------------EEEECCCSSCCC---CCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC---------------------eeecCcCCCCCC---CCCCCCCCCcccceeeh
Confidence 3678 6999999999999999999854 111222222110 12233457899999999
Q ss_pred hhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHHCCCcEEEEccCCCC-CCCCCCHHHH
Q 039265 185 AAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIEDGVDVLSISIGGGS-VPFFNDSIAV 263 (708)
Q Consensus 185 iag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~~g~dVIn~S~G~~~-~~~~~~~~~~ 263 (708)
|+|+... .+.||||+|+|+.+|++.+........++++||+||++++++|||||||... .......+..
T Consensus 59 iag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~ 128 (282)
T 3zxy_A 59 IFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLEN 128 (282)
T ss_dssp HHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHH
T ss_pred hhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccHHHHH
Confidence 9987421 2479999999999999876522367888999999999999999999999753 2234456778
Q ss_pred HHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCCceeEEEecC
Q 039265 264 GSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGM 343 (708)
Q Consensus 264 a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (708)
++.++.++|+++|+||||+|.....+++..+++|+|||.+.
T Consensus 129 ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~--------------------------------------- 169 (282)
T 3zxy_A 129 AVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD--------------------------------------- 169 (282)
T ss_dssp HHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT---------------------------------------
T ss_pred HHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC---------------------------------------
Confidence 88889999999999999999998888999999999998521
Q ss_pred CCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceEEEcHHHHHH
Q 039265 344 NGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLK 423 (708)
Q Consensus 344 ~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~ 423 (708)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCCCcceeeccc
Q 039265 424 IKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNPKSIFNIMSG 503 (708)
Q Consensus 424 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sG 503 (708)
.+.++.||+||+. ..||||+|||.+|+++++. +.|..++|
T Consensus 170 --------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~---------~~~~~~sG 209 (282)
T 3zxy_A 170 --------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGAKPG---------GGTERLSG 209 (282)
T ss_dssp --------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT---------SCEEEECS
T ss_pred --------------------------CCccccccCCCCC-----ccccceeccCcceeeecCC---------CceeecCC
Confidence 2267889999875 4689999999999999987 78999999
Q ss_pred hhhhHHHHHHHHHHHHhcC----CCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcCCCCC
Q 039265 504 TSMACPHLSGIAALLKSSH----PYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRAND 573 (708)
Q Consensus 504 TSmAaP~VAG~aALl~q~~----p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 573 (708)
||||||||||++|||++++ |.++|++||++|++||++++.. .+.....||+|+||+.+||+
T Consensus 210 TS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~---------~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 210 TAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD---------APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------------CGGGTTCBCCHHHHHH
T ss_pred CcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC---------CCCccCceeeeEeCHHHHHH
Confidence 9999999999999999874 7899999999999999987532 23455789999999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=9.1e-52 Score=438.24 Aligned_cols=271 Identities=28% Similarity=0.407 Sum_probs=224.2
Q ss_pred cccccc--CCcccccCCCCC--ccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCC
Q 039265 93 FLGLHQ--GMGVWKESNFGK--GVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGT 168 (708)
Q Consensus 93 ~~g~~~--~~~~~~~g~~G~--Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~ 168 (708)
.|+++. ++.+|+.+ +|+ ||+|||||||||++||+|.++ +...++|..+......
T Consensus 9 ~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------~~~~~~~~~~~~~~~~ 66 (320)
T 2z30_A 9 PWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------IAWCVSTLRGKVSTKL 66 (320)
T ss_dssp CHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------EEEEEECGGGCCBCCH
T ss_pred CCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------cccCccccCCccCCCC
Confidence 466554 56799998 999 999999999999999999753 4445555543210001
Q ss_pred CCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHC-------
Q 039265 169 EPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIED------- 240 (708)
Q Consensus 169 ~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~------- 240 (708)
.+..|..||||||||||+|... ..+ +.||||+|+|+.+|+++.. + +..+++++||+||+++
T Consensus 67 ~~~~d~~gHGT~vAgiia~~~n--------~~g-~~GvAp~a~l~~~~v~~~~--g~~~~~~i~~ai~~a~~~~~~~~~~ 135 (320)
T 2z30_A 67 RDCADQNGHGTHVIGTIAALNN--------DIG-VVGVAPGVQIYSVRVLDAR--GSGSYSDIAIGIEQAILGPDGVADK 135 (320)
T ss_dssp HHHBCSSSHHHHHHHHHHCCSS--------SBS-CCCSSTTCEEEEEECSCTT--SEEEHHHHHHHHHHHHHTTTTCSCT
T ss_pred CCCCCCCCCHHHHHHHHHcccC--------CCc-eEeeCCCCEEEEEEeeCCC--CCccHHHHHHHHHHHHhCccccccc
Confidence 1236789999999999998621 112 3799999999999999876 5 6788999999999987
Q ss_pred -------------CCcEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcc
Q 039265 241 -------------GVDVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRS 307 (708)
Q Consensus 241 -------------g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~ 307 (708)
+++|||||||... ....+..++.++.++|++||+||||+|.....+++..|++|+|||++.
T Consensus 136 ~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--- 209 (320)
T 2z30_A 136 DGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS--- 209 (320)
T ss_dssp TSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT---
T ss_pred ccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCC---
Confidence 9999999999864 245677788889999999999999999988888999999999999521
Q ss_pred eEEEEEcCCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHc
Q 039265 308 IVATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNA 387 (708)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ 387 (708)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCC
Q 039265 388 GGAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPG 467 (708)
Q Consensus 388 ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g 467 (708)
.+.++.||++||
T Consensus 210 --------------------------------------------------------------~~~~~~~S~~g~------ 221 (320)
T 2z30_A 210 --------------------------------------------------------------NDNIASFSNRQP------ 221 (320)
T ss_dssp --------------------------------------------------------------TSCBCTTSCSSC------
T ss_pred --------------------------------------------------------------CCCcCcccCCCC------
Confidence 126788999996
Q ss_pred CcCCceeeCCCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcC-------------CCCCHHHHHHHH
Q 039265 468 ILKPDIIGPGLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSH-------------PYWSPAAIKSAL 534 (708)
Q Consensus 468 ~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------------p~~s~~~vk~~L 534 (708)
+|+|||.+|+++++. +.|..++|||||||||||++|||+|++ |.|++.+||++|
T Consensus 222 ----~v~APG~~i~s~~~~---------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L 288 (320)
T 2z30_A 222 ----EVSAPGVDILSTYPD---------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGIL 288 (320)
T ss_dssp ----SEEEECSSEEEEETT---------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHH
T ss_pred ----CEEeCCCCeEEeccC---------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHH
Confidence 789999999999986 789999999999999999999999998 999999999999
Q ss_pred HccccccccCCccccccCCCCCCCCccCCCCCCcCCCCCC
Q 039265 535 MTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRANDP 574 (708)
Q Consensus 535 ~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 574 (708)
++||+++.. +..+..||+|+||+.+||+.
T Consensus 289 ~~ta~~~~~-----------~g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 289 HITADDLGP-----------TGWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp HHHSBCCSS-----------SSSBTTTBTCBCCHHHHHHH
T ss_pred HhhCccCCC-----------CCCCCCcCCceeCHHHHHHH
Confidence 999998743 23457899999999999864
No 20
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=2.9e-51 Score=440.01 Aligned_cols=279 Identities=20% Similarity=0.153 Sum_probs=224.6
Q ss_pred ccccccc--CCcccccCCCCC--ccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCC
Q 039265 92 SFLGLHQ--GMGVWKESNFGK--GVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKG 167 (708)
Q Consensus 92 ~~~g~~~--~~~~~~~g~~G~--Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~ 167 (708)
..|++.. +..+|+. .+|+ ||+||||||||| +||+|.++ +...++|....+...
T Consensus 23 ~~W~l~~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------~~~~~~~~~~~~~~~ 79 (347)
T 2iy9_A 23 KPWYFDAIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------EFAKFSFTQDGSPFP 79 (347)
T ss_dssp CCHHHHHHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------EEEEEECBTTCCSSC
T ss_pred cCcchhhCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------cccCCcccCCCCCCC
Confidence 3455543 5679998 8999 999999999999 99999753 444566664321111
Q ss_pred CCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHHC------C
Q 039265 168 TEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIED------G 241 (708)
Q Consensus 168 ~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~~------g 241 (708)
...+.|..||||||||||+|.. | +.||||+|+|+.+|+++.. +.. ++++||+||+++ +
T Consensus 80 ~~~~~d~~gHGT~vAgiia~~~-------g-----~~GvAp~a~l~~~~v~~~~--~~~--~~~~ai~~a~~~~~~~~~~ 143 (347)
T 2iy9_A 80 VKKSEALYIHGTAMASLIASRY-------G-----IYGVYPHALISSRRVIPDG--VQD--SWIRAIESIMSNVFLAPGE 143 (347)
T ss_dssp CSSSHHHHHHHHHHHHHHHCSS-------S-----SCCSSTTCEEEEEECCSSB--CTT--HHHHHHHHHHTCTTSCTTE
T ss_pred CCCCCCCCCcHHHHHHHHhccc-------C-----CcccCCCCEEEEEEEecCC--CHH--HHHHHHHHHHhhhhcccCC
Confidence 2245678899999999999871 2 2799999999999999765 333 999999999999 9
Q ss_pred CcEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCC-------CCcccCCCC----------ceEEEccccc
Q 039265 242 VDVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPF-------NSTISNEAP----------WILTVGASTL 304 (708)
Q Consensus 242 ~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~-------~~~~~~~~p----------~vitVga~~~ 304 (708)
++|||||||..........+..++.++.++|++||+||||+|.. ...+++..+ ++|+|||++.
T Consensus 144 ~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~ 223 (347)
T 2iy9_A 144 EKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQ 223 (347)
T ss_dssp EEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECC
T ss_pred ceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEccc
Confidence 99999999976444456778888889999999999999999975 456778888 9999999632
Q ss_pred --CcceEEEEEcCCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHH
Q 039265 305 --DRSIVATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGE 382 (708)
Q Consensus 305 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~ 382 (708)
+...
T Consensus 224 ~~~g~~-------------------------------------------------------------------------- 229 (347)
T 2iy9_A 224 YRKGET-------------------------------------------------------------------------- 229 (347)
T ss_dssp CCTTSC--------------------------------------------------------------------------
T ss_pred CCCCce--------------------------------------------------------------------------
Confidence 1000
Q ss_pred HHHHcCCcEEEEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCC
Q 039265 383 QVKNAGGAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPN 462 (708)
Q Consensus 383 ~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~ 462 (708)
....+.++.||++||+
T Consensus 230 ----------------------------------------------------------------~~~~~~~~~fS~~G~~ 245 (347)
T 2iy9_A 230 ----------------------------------------------------------------PVLHGGGITGSRFGNN 245 (347)
T ss_dssp ----------------------------------------------------------------CCBCCCSSSCBCBCTT
T ss_pred ----------------------------------------------------------------ecccCCCCCCCCCCCC
Confidence 0001256799999985
Q ss_pred CCCCCCcCCceeeCCCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccc
Q 039265 463 LASPGILKPDIIGPGLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLN 542 (708)
Q Consensus 463 ~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~ 542 (708)
||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||+++.
T Consensus 246 -------~~di~APG~~i~s~~~~---------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 309 (347)
T 2iy9_A 246 -------WVDIAAPGQNITFLRPD---------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYP 309 (347)
T ss_dssp -------TCSEEEECSSEEEECTT---------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECG
T ss_pred -------CCEEEeCCCCeEeecCC---------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 67999999999999986 78999999999999999999999999999999999999999999875
Q ss_pred cCCccccccCCCCCCCCccCCCCCCcCCCCCCc
Q 039265 543 MNGERIVDETLRPADIFAIGAGHVNPSRANDPG 575 (708)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 575 (708)
.. ....+|+|+||+.+|++..
T Consensus 310 ~~------------~~~~~G~G~ld~~~A~~~~ 330 (347)
T 2iy9_A 310 SL------------VDKVTEGRVLNAEKAISMF 330 (347)
T ss_dssp GG------------TTTSGGGEECCHHHHHHHH
T ss_pred CC------------CCccccCCEecHHHHHHHH
Confidence 43 2268999999999999843
No 21
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=3.8e-51 Score=431.82 Aligned_cols=273 Identities=26% Similarity=0.328 Sum_probs=220.1
Q ss_pred CcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCChH
Q 039265 100 MGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHGT 179 (708)
Q Consensus 100 ~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGT 179 (708)
+++|+....++||+|||||||||++||+|.++ .+.+..+|..+. .....|.+||||
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------~~~~~~~~~~~~----~~~~~d~~gHGT 66 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------DLTRLPSLVSGE----ANANGSMSTHGT 66 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------EEEECC--------------CCCCHHHH
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------cccCCCcccCCC----CCCCCCCCCchH
Confidence 45999987779999999999999999999854 223333343321 223457789999
Q ss_pred HHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHHCCCcEEEEccCCCC-CCCCC
Q 039265 180 HVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIEDGVDVLSISIGGGS-VPFFN 258 (708)
Q Consensus 180 hVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~~g~dVIn~S~G~~~-~~~~~ 258 (708)
||||||+|+.. +.+.||||+|+|+.+|++.+....+...++++||+||++++++|||+|||... .....
T Consensus 67 hVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~~~~~~ 136 (306)
T 4h6w_A 67 HVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTDAGEAD 136 (306)
T ss_dssp HHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCC
T ss_pred HHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeeccccccccCCCcc
Confidence 99999998741 12479999999999999876522367888999999999999999999999643 23345
Q ss_pred CHHHHHHHHHHhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCCceeE
Q 039265 259 DSIAVGSFAAIQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQTPLPL 338 (708)
Q Consensus 259 ~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (708)
..+..++..+.++|+++|+||||+|.....+|+..+++|+|||++.
T Consensus 137 ~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~---------------------------------- 182 (306)
T 4h6w_A 137 TWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD---------------------------------- 182 (306)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT----------------------------------
T ss_pred HHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC----------------------------------
Confidence 5678888899999999999999999988888999999999998521
Q ss_pred EEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceEEEcH
Q 039265 339 VYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPATHVSN 418 (708)
Q Consensus 339 ~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~ 418 (708)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCCCcce
Q 039265 419 DAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNPKSIF 498 (708)
Q Consensus 419 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y 498 (708)
.+.++.||++|+. ..||||+|||.+|+++++. +.|
T Consensus 183 -------------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~---------~~~ 217 (306)
T 4h6w_A 183 -------------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDILGAKPN---------GGT 217 (306)
T ss_dssp -------------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSEEEECTT---------SCE
T ss_pred -------------------------------CCCccccccccCC-----cCcceeecCCcCcccccCC---------Cce
Confidence 1256788999964 4689999999999999987 789
Q ss_pred eeccchhhhHHHHHHHHHHHHh----cCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcCCCCCC
Q 039265 499 NIMSGTSMACPHLSGIAALLKS----SHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRANDP 574 (708)
Q Consensus 499 ~~~sGTSmAaP~VAG~aALl~q----~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 574 (708)
..++|||||||||||++|||++ ++|.|+|+|||++|++||+++...+ ......||+|+||+.+|++.
T Consensus 218 ~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~---------~~~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 218 IRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD---------TDDQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT---------CSCGGGGTTCBCCHHHHHHH
T ss_pred eccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCCCCcceeecCHHHHHHH
Confidence 9999999999999999999986 4699999999999999999875432 12345799999999999973
No 22
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.3e-49 Score=470.12 Aligned_cols=408 Identities=23% Similarity=0.247 Sum_probs=272.6
Q ss_pred ccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCChHHHHHHhhcCcc
Q 039265 111 GVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHGTHVAGTAAGAFV 190 (708)
Q Consensus 111 Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~ 190 (708)
+|+|||||||+|.+|++.... ..|+...+.+...+.+.+..++.++.+. .....|++||||||||||||..
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l------~~Y~~~~dyg~F~D~v~~~~n~~Ddgd~--~~~v~D~~GHGThVAGIIAa~~- 284 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRI------GEYSRTHETRNVDDFLSISVNVHDEGNV--LEVVGMSSPHGTHVSSIASGNH- 284 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEE------ECTTTTCCCCEESSSCEEEEEEEGGGTE--EEEEECCCHHHHHHHHHHCCCC-
T ss_pred CEEEEEEeCCCCCCccccccc------ccccccccccccccccCCCCccCCCCCc--cccCCCCCCcHHHHHHHHhcCC-
Confidence 699999999998776654310 0111111100001122222233221000 1123578999999999999985
Q ss_pred cCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHH-----CCCcEEEEccCCCCCCCCCCHHHHH
Q 039265 191 KNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIE-----DGVDVLSISIGGGSVPFFNDSIAVG 264 (708)
Q Consensus 191 ~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~-----~g~dVIn~S~G~~~~~~~~~~~~~a 264 (708)
++ ..+.||||+|+|+.+|+++..... ....+++.+|.+|++ +|++|||||||........+.+..+
T Consensus 285 N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~~~~~l~~a 356 (1354)
T 3lxu_X 285 SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGEL 356 (1354)
T ss_dssp SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCCSCSSCCHHHHH
T ss_pred CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCCCCCccHHHHHH
Confidence 21 123899999999999999765211 356778888888887 7999999999987544445677778
Q ss_pred HHHHH-hcCceEEEecCCCCCCCCc--ccC--CCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCCceeEE
Q 039265 265 SFAAI-QKGIFVSCAAGNSGPFNST--ISN--EAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQTPLPLV 339 (708)
Q Consensus 265 ~~~a~-~~Gv~vV~AAGN~g~~~~~--~~~--~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (708)
+.++. ++|++||+||||+|....+ +++ .++++|+|||++........
T Consensus 357 I~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~---------------------------- 408 (1354)
T 3lxu_X 357 MNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAE---------------------------- 408 (1354)
T ss_dssp HHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----------------------------
T ss_pred HHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccc----------------------------
Confidence 87876 8999999999999986543 456 38999999997432210000
Q ss_pred EecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceEEEcHH
Q 039265 340 YAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPATHVSND 419 (708)
Q Consensus 340 ~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~ 419 (708)
|..
T Consensus 409 ys~----------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 409 YAM----------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCCCccee
Q 039265 420 AGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNPKSIFN 499 (708)
Q Consensus 420 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~ 499 (708)
.....+.++.|||+||+. ++++||||+|||++|+++..... ++|.
T Consensus 412 --------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~-------~~y~ 456 (1354)
T 3lxu_X 412 --------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM-------SKSQ 456 (1354)
T ss_dssp --------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC----------------------
T ss_pred --------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCC-------Ccee
Confidence 001123789999999998 68999999999999999865322 7899
Q ss_pred eccchhhhHHHHHHHHHHHHh----cCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCcCCCCCCc
Q 039265 500 IMSGTSMACPHLSGIAALLKS----SHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNPSRANDPG 575 (708)
Q Consensus 500 ~~sGTSmAaP~VAG~aALl~q----~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 575 (708)
.++|||||||||||++|||++ .+|+|++.+||++|++||+++.. ..++.||+|+||+.+|++..
T Consensus 457 ~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------------~~~~~~G~GlLDa~~AV~~a 524 (1354)
T 3lxu_X 457 LMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------------VDPFAQGHGLLNVEKAFEHL 524 (1354)
T ss_dssp CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT------------SCTTTSSSSBCCHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC------------CCcccccCCEeCHHHHHHHH
Confidence 999999999999999999986 89999999999999999998743 24568999999999999999
Q ss_pred ccccCCCCCcccccccCCCCc-ceeEEEecCCccccccCcccccCCCceEEEEEEEec----C---CC-ceeE--EEEEe
Q 039265 576 LVYDIQPDDYIPYLCGLGYSD-KEVGILVHRPVAQLNYPSFSVTLGPAQTFTRTVTNV----G---QV-YSSY--AVNVV 644 (708)
Q Consensus 576 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~ps~~~~~~~~~~~~~tv~n~----g---~~-~~ty--~~~~~ 644 (708)
+.++..+.+++.|.|..+... ..+... . ... ....+++++|+-+ . .. ...| ++.+.
T Consensus 525 ~~~~~~p~~~v~f~~~v~~~~~rgIylR--~----~~~-------~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~ 591 (1354)
T 3lxu_X 525 TEHRQSKDNMLRFSVRVGNNADKGIHLR--Q----GVQ-------RNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLI 591 (1354)
T ss_dssp HTTTTCGGGGEEEEEEETTTTBSSEEEC--S----SCC-------CSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEE
T ss_pred HhcCCCCccceEEEEEecCCCCCceEEe--c----ccc-------CCceEEEEEEeeeecCcccCChhhccceEEEEEEe
Confidence 999999999999999887532 223221 1 000 1134455444321 1 11 1112 22332
Q ss_pred CC-CCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCceEEEEEEEEc-----CceEEEEeEEEEeC
Q 039265 645 AP-QGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQFAQGYITWVS-----AKYSVRSPISVRLQ 708 (708)
Q Consensus 645 ~~-~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~i~~~~-----~~~~~~~P~~~~~~ 708 (708)
.. +-+ + -|+.+.+. ++.++|.|++++..... +.+++.|..-| .+..+|+||.|..+
T Consensus 592 ~t~~wv--~-~p~~l~l~--~~~r~~~v~vDp~~L~~---G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 592 ASQPWV--Q-CGAFLDLS--YGTRSIAVRVDPTGLQP---GVHSAVIRAYDTDCVQKGSLFEIPVTVVQP 653 (1354)
T ss_dssp ESSTTE--E-ECSCEECT--TSCEEEEEEECGGGCCS---EEEEEEEEEEESSCTTSCCSEEEEEEEEEC
T ss_pred cCCCce--e-cccceeec--CCCceEEEEECCCCCCC---cceeEEEEEEEcCCcccCceEEeeEEEEee
Confidence 22 222 2 38888774 68899999999998866 89999999775 47999999999864
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1e-49 Score=440.51 Aligned_cols=288 Identities=28% Similarity=0.352 Sum_probs=225.3
Q ss_pred Ccccc-cCCCCCccEEEEEcCCCCC------CCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCC
Q 039265 100 MGVWK-ESNFGKGVIIGILDGGINP------DHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPI 172 (708)
Q Consensus 100 ~~~~~-~g~~G~Gv~VaVIDtGid~------~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~ 172 (708)
+.+|. .+++|+||+|||||||||. .||+|.++ +...++|.. ...+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~---------------------i~~~~~~~~------~~~~~ 63 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK---------------------ITALYALGR------TNNAN 63 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC---------------------EEEEEETTT------TTCCC
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC---------------------EeeeccccC------CCCCC
Confidence 45897 7999999999999999999 79999753 445566653 23567
Q ss_pred CCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCC---CHHHHHHHHHHHHHCCCcEEEEcc
Q 039265 173 DVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDC---TESDLLAGLDAAIEDGVDVLSISI 249 (708)
Q Consensus 173 d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~---~~~~i~~ai~~a~~~g~dVIn~S~ 249 (708)
|..||||||||||+|+.. + +.||||+|+|+.+|++... +. ...++.++|++|+++|++||||||
T Consensus 64 d~~gHGT~VAgiiag~g~----------~-~~GvAp~a~l~~~~v~~~~--g~~~~~~~~~~~ai~~a~~~g~~Vin~S~ 130 (434)
T 1wmd_A 64 DTNGHGTHVAGSVLGNGS----------T-NKGMAPQANLVFQSIMDSG--GGLGGLPSNLQTLFSQAYSAGARIHTNSW 130 (434)
T ss_dssp CSSSHHHHHHHHHHCCSS----------S-SCCSSTTSEEEEEECCCTT--SSCTTSCSSHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCcHHHHHHHHHcCCC----------C-ceeeCCCCEEEEEEeecCC--CccccccHHHHHHHHHHHhcCCeEEEecC
Confidence 889999999999998631 1 3799999999999999766 42 456799999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHH-HhcCceEEEecCCCCCCC--CcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeecc
Q 039265 250 GGGSVPFFNDSIAVGSFAA-IQKGIFVSCAAGNSGPFN--STISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVF 326 (708)
Q Consensus 250 G~~~~~~~~~~~~~a~~~a-~~~Gv~vV~AAGN~g~~~--~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (708)
|......+ +....++.++ .++|+++|+||||+|... ..+|+.++++|+|||++..+..
T Consensus 131 G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~------------------ 191 (434)
T 1wmd_A 131 GAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPS------------------ 191 (434)
T ss_dssp CBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGG------------------
T ss_pred CCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcc------------------
Confidence 98642222 3445555555 589999999999999764 4567889999999997432100
Q ss_pred CCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCccccc
Q 039265 327 QPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIA 406 (708)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~ 406 (708)
.+ .
T Consensus 192 --------------------------------------------~~-~-------------------------------- 194 (434)
T 1wmd_A 192 --------------------------------------------FG-S-------------------------------- 194 (434)
T ss_dssp --------------------------------------------GC-G--------------------------------
T ss_pred --------------------------------------------cC-c--------------------------------
Confidence 00 0
Q ss_pred CCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecC
Q 039265 407 DPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFE 486 (708)
Q Consensus 407 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~ 486 (708)
+ ....+.++.||++||+. ++++||||+|||++|+++++.
T Consensus 195 --------------------~-------------------~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s~~~~ 233 (434)
T 1wmd_A 195 --------------------Y-------------------ADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSS 233 (434)
T ss_dssp --------------------G-------------------GSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCT
T ss_pred --------------------c-------------------cCCCCccccccCCCCCC--CCCCCceEEcCCCCeEecCCC
Confidence 0 01134789999999998 689999999999999999853
Q ss_pred CCCC---CCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHccccccccCCccccccCCCCCCC
Q 039265 487 PLDF---NTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYW-----SPAAIKSALMTTADLLNMNGERIVDETLRPADI 558 (708)
Q Consensus 487 ~~~~---~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~-----s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~ 558 (708)
.... .....+.|..++|||||||||||+||||+|++|++ ++++||++|++||+++.. ..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-----------~~~~ 302 (434)
T 1wmd_A 234 LAPDSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-----------GYPN 302 (434)
T ss_dssp TCCGGGSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS-----------CSSC
T ss_pred CCCCcccccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC-----------CCCC
Confidence 2100 00012689999999999999999999999998865 899999999999987521 2466
Q ss_pred CccCCCCCCcCCCCCCc
Q 039265 559 FAIGAGHVNPSRANDPG 575 (708)
Q Consensus 559 ~~~G~G~vn~~~Al~~~ 575 (708)
..||||+||+.+|++..
T Consensus 303 ~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 303 GNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp TTTTTCBCCHHHHHTCE
T ss_pred ccCCcCeEeHHHhcccc
Confidence 89999999999999754
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=4.8e-49 Score=409.23 Aligned_cols=235 Identities=31% Similarity=0.467 Sum_probs=204.2
Q ss_pred CcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCChH
Q 039265 100 MGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHGT 179 (708)
Q Consensus 100 ~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGT 179 (708)
..+|..+++|+||+|||||||||++||+|.++ +...++|... ...+.|..||||
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------~~~~~~~~~~-----~~~~~d~~gHGT 72 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------SVSGYDFVDN-----DADSSDCNGHGT 72 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------EEEEEETTTT-----BSCCCCSSSHHH
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------ccccccccCC-----CCCCCCCCCcHH
Confidence 45899999999999999999999999999753 4445667654 235678999999
Q ss_pred HHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHC--CCcEEEEccCCCCCCC
Q 039265 180 HVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIED--GVDVLSISIGGGSVPF 256 (708)
Q Consensus 180 hVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~--g~dVIn~S~G~~~~~~ 256 (708)
||||||+|.. .||||+|+|+.+|+++.. + +..+++++||+|++++ +++|||||||...
T Consensus 73 ~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~--g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~~--- 133 (284)
T 1sh7_A 73 HVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCS--GSGTTSGVISGVDWVAQNASGPSVANMSLGGGQ--- 133 (284)
T ss_dssp HHHHHHHCTT--------------TCSSTTCEEEEEECBCTT--SCBCHHHHHHHHHHHHHHCCSSEEEEECCCBSC---
T ss_pred HHHHHHhccc--------------CCcCCCCEEEEEEeeCCC--CCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCCC---
Confidence 9999999873 699999999999999876 5 6788999999999984 7999999999862
Q ss_pred CCCHHHHHHHHHHhcCceEEEecCCCCCCCC-cccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCCc
Q 039265 257 FNDSIAVGSFAAIQKGIFVSCAAGNSGPFNS-TISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQTP 335 (708)
Q Consensus 257 ~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (708)
...+..++.++.++|++||+||||+|.... .+|+..+++|+||+++.
T Consensus 134 -~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------------------- 181 (284)
T 1sh7_A 134 -STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS------------------------------- 181 (284)
T ss_dssp -CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT-------------------------------
T ss_pred -CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC-------------------------------
Confidence 457778888899999999999999997653 45788999999998521
Q ss_pred eeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceEE
Q 039265 336 LPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPATH 415 (708)
Q Consensus 336 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~ 415 (708)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCCC
Q 039265 416 VSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNPK 495 (708)
Q Consensus 416 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~ 495 (708)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 182 ----------------------------------~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~--------- 210 (284)
T 1sh7_A 182 ----------------------------------SDSRSSFSNWGSCV--------DLFAPGSQIKSAWYD--------- 210 (284)
T ss_dssp ----------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTT---------
T ss_pred ----------------------------------CCCcCcccCCCCcc--------EEEeccCCeEEecCC---------
Confidence 12678999999965 999999999999876
Q ss_pred cceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccc
Q 039265 496 SIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLN 542 (708)
Q Consensus 496 ~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~ 542 (708)
+.|..++|||||||||||++|||+|++|+|+++|||++|++||++..
T Consensus 211 ~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 211 GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 78999999999999999999999999999999999999999999764
No 25
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=5.9e-50 Score=428.94 Aligned_cols=292 Identities=27% Similarity=0.322 Sum_probs=220.5
Q ss_pred CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCccccccc-------CCCCCceeEeeeecccCC---CCCC-
Q 039265 99 GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCD-------FSTCNNKLIGARTFNIEG---NVKG- 167 (708)
Q Consensus 99 ~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~-------~~~~~~kv~g~~~~~~~~---~~~~- 167 (708)
+..+|+.+++|+||+||||||||+ +||+|.++-.. .|+-... .+...... ...++...+ ..+.
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~ 94 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPF-DEGDWFDNWACGGRPDP 94 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCB-CCCCCBCTTTTSCTTCG
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCcc-ccccccccccccCCCCc
Confidence 456999999999999999999998 99999854211 1110000 00000000 000000000 0000
Q ss_pred CCCCCCCCCChHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHH--------
Q 039265 168 TEPPIDVDGHGTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIE-------- 239 (708)
Q Consensus 168 ~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~-------- 239 (708)
.....|..||||||||||+|...+.. + +.||||+|+|+.+|++... ++..++++++|+||++
T Consensus 95 ~~~~~d~~gHGT~vAgiia~~~~~~~-------g-~~GvAp~a~l~~~~v~~~~--~~~~~~~~~ai~~a~~~~~~~~~~ 164 (340)
T 3lpc_A 95 RKERSDSSWHGSHVAGTIAAVTNNRI-------G-VAGVAYGAKVVPVRALGRC--GGYDSDISDGLYWAAGGRIAGIPE 164 (340)
T ss_dssp GGSCBCCCCHHHHHHHHHHCCCSSSS-------S-CCCTTTTSEEEEEECCBTT--BCCHHHHHHHHHHHHTCCCTTSCC
T ss_pred ccCCCCCCCCHHHHHHHHHccCCCCC-------c-ceeecCCCEEEEEEEecCC--CCcHHHHHHHHHHHhccccccccc
Confidence 22356889999999999999753322 2 3799999999999999887 6888999999999998
Q ss_pred --CCCcEEEEccCCCCCCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCC-cccCCCCceEEEcccccCcceEEEEEcCC
Q 039265 240 --DGVDVLSISIGGGSVPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNS-TISNEAPWILTVGASTLDRSIVATAKLGN 316 (708)
Q Consensus 240 --~g~dVIn~S~G~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~ 316 (708)
.+++|||||||... .....+..++.++.++|++||+||||+|.... .+++..+++|+|||++.
T Consensus 165 ~~~~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------ 230 (340)
T 3lpc_A 165 NRNPAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS------------ 230 (340)
T ss_dssp CSSCCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT------------
T ss_pred ccCCCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC------------
Confidence 89999999999753 22356777788899999999999999997754 46788899999998521
Q ss_pred CceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEec
Q 039265 317 REEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMN 396 (708)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~ 396 (708)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeC
Q 039265 397 DEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGP 476 (708)
Q Consensus 397 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~AP 476 (708)
.+.++.||++|| ||||+||
T Consensus 231 -----------------------------------------------------~~~~~~~S~~g~--------~~di~Ap 249 (340)
T 3lpc_A 231 -----------------------------------------------------RGIRASFSNYGV--------DVDLAAP 249 (340)
T ss_dssp -----------------------------------------------------TSSBCTTCCBST--------TCCEEEE
T ss_pred -----------------------------------------------------CCCcCCCCCCCC--------CceEEec
Confidence 126789999997 4599999
Q ss_pred CCcEEeeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhc-C---CCCCHHHHHHHHHccccccccCCccccccC
Q 039265 477 GLSILAAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSS-H---PYWSPAAIKSALMTTADLLNMNGERIVDET 552 (708)
Q Consensus 477 G~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~ 552 (708)
|.+|+++++... .....+.|..++|||||||+|||++|||+|+ + |.+++++||++|++||+++..
T Consensus 250 G~~i~s~~~~~~--~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~--------- 318 (340)
T 3lpc_A 250 GQDILSTVDSGT--RRPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG--------- 318 (340)
T ss_dssp CSSEEEEEESCS--SSCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS---------
T ss_pred CCCeecccCCCC--cCCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC---------
Confidence 999999987632 1122356999999999999999999999998 5 999999999999999998742
Q ss_pred CCCCCCCccCCCCCCcCCCCCCc
Q 039265 553 LRPADIFAIGAGHVNPSRANDPG 575 (708)
Q Consensus 553 ~~~~~~~~~G~G~vn~~~Al~~~ 575 (708)
.....||+|+||+.+||+..
T Consensus 319 ---~~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 319 ---RLDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp ---CCSSCCCSSBCCHHHHHHHH
T ss_pred ---CCCCCcccceecHHHHHHHH
Confidence 24569999999999998743
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1.9e-48 Score=404.27 Aligned_cols=237 Identities=32% Similarity=0.449 Sum_probs=203.5
Q ss_pred CcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCChH
Q 039265 100 MGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHGT 179 (708)
Q Consensus 100 ~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGT 179 (708)
..+|..+++|+||+|||||||||++||+|.++ +...++|..+ ..++.|..||||
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------~~~~~d~~~~-----~~~~~d~~gHGT 74 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------ASSGYDFIDN-----DYDATDCNGHGT 74 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------EEEEEETTTT-----BSCCCCSSSHHH
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------cccCeecCCC-----CCCCCCCCCcHH
Confidence 45799999999999999999999999999753 3445667653 235678999999
Q ss_pred HHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHH--CCCcEEEEccCCCCCCC
Q 039265 180 HVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIE--DGVDVLSISIGGGSVPF 256 (708)
Q Consensus 180 hVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~--~g~dVIn~S~G~~~~~~ 256 (708)
||||||+|.. .||||+|+|+.+|++++. + +..+++++||+|+++ .+++|||||||...
T Consensus 75 ~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~--g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~--- 135 (278)
T 2b6n_A 75 HVAGTIGGST--------------YGVAKNVNVVGVRVLNCS--GSGSNSGVIAGINWVKNNASGPAVANMSLGGGA--- 135 (278)
T ss_dssp HHHHHHHCTT--------------TCSSTTCEEEEEECSCTT--SCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC---
T ss_pred HHHHHHHCCC--------------cCCCCCCeEEEEEEECCC--CCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc---
Confidence 9999999863 699999999999999876 5 678899999999998 58999999999863
Q ss_pred CCCHHHHHHHHHHhcCceEEEecCCCCCCCC-cccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCCc
Q 039265 257 FNDSIAVGSFAAIQKGIFVSCAAGNSGPFNS-TISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQTP 335 (708)
Q Consensus 257 ~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (708)
...+..++.++.++|+++|+||||+|.... .+|+..+++|+|||++.
T Consensus 136 -~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------------------- 183 (278)
T 2b6n_A 136 -SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS------------------------------- 183 (278)
T ss_dssp -CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------------------------------
T ss_pred -CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC-------------------------------
Confidence 356777888899999999999999998654 35788899999998521
Q ss_pred eeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceEE
Q 039265 336 LPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPATH 415 (708)
Q Consensus 336 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~ 415 (708)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCCC
Q 039265 416 VSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNPK 495 (708)
Q Consensus 416 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~~ 495 (708)
.+.++.||++||.. ||+|||++|+++++...
T Consensus 184 ----------------------------------~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~------- 214 (278)
T 2b6n_A 184 ----------------------------------NDSRSSFSNYGTCL--------DIYAPGSSITSSWYTSN------- 214 (278)
T ss_dssp ----------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTTST-------
T ss_pred ----------------------------------CCCcCCcCCCCCCC--------eEEeCCCCeECcccCCC-------
Confidence 12678899999854 99999999999986532
Q ss_pred cceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccc
Q 039265 496 SIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLN 542 (708)
Q Consensus 496 ~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~ 542 (708)
+.|..++|||||||||||++|||+|++|+|++.|||++|++||++..
T Consensus 215 ~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 215 SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 68999999999999999999999999999999999999999998753
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=2.7e-48 Score=403.35 Aligned_cols=237 Identities=30% Similarity=0.438 Sum_probs=205.3
Q ss_pred CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCCh
Q 039265 99 GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHG 178 (708)
Q Consensus 99 ~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHG 178 (708)
...+|..+++|+||+|||||||||++||+|.++ +...++|.. ....|..|||
T Consensus 20 ~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------~~~~~~~~~-------~~~~d~~gHG 71 (276)
T 4dzt_A 20 LSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------ARVGYDALG-------GNGQDCNGHG 71 (276)
T ss_dssp CCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------EEEEEETTS-------SCSCCSSSHH
T ss_pred cccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------eeccccCCC-------CCCCCCCCCH
Confidence 355899999999999999999999999999753 444556653 3567889999
Q ss_pred HHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHC--CCcEEEEccCCCCCC
Q 039265 179 THVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIED--GVDVLSISIGGGSVP 255 (708)
Q Consensus 179 ThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~--g~dVIn~S~G~~~~~ 255 (708)
|||||||+|.. .||||+|+|+.+|++++. + ....+++++++|++++ +++|||||||...
T Consensus 72 T~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~--~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~~-- 133 (276)
T 4dzt_A 72 THVAGTIGGVT--------------YGVAKAVNLYAVRVLDCN--GSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGV-- 133 (276)
T ss_dssp HHHHHHHHCTT--------------TCSSTTCEEEEEECSCTT--SCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC--
T ss_pred HHHHHHHHccc--------------cCCCCCCEEEEEEEeCCC--CCcCHHHHHHHHHHHHhcCCCCeEEEECCCCCC--
Confidence 99999999873 699999999999999876 5 7888999999999987 8999999999753
Q ss_pred CCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcc-cCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCCCC
Q 039265 256 FFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTI-SNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFPQT 334 (708)
Q Consensus 256 ~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~-~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (708)
...+..++.++.++|+++|+||||+|...... ++..+++|+|||.+.
T Consensus 134 --~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------------------ 181 (276)
T 4dzt_A 134 --STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS------------------------------ 181 (276)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------------------------------
T ss_pred --CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC------------------------------
Confidence 46777888899999999999999999776544 788899999998521
Q ss_pred ceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccceE
Q 039265 335 PLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLPAT 414 (708)
Q Consensus 335 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p~~ 414 (708)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCCCC
Q 039265 415 HVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNTNP 494 (708)
Q Consensus 415 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~~~ 494 (708)
.+.++.||++||.. ||+|||++|+++++...
T Consensus 182 -----------------------------------~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~------ 212 (276)
T 4dzt_A 182 -----------------------------------SDARASFSNYGSCV--------DLFAPGASIPSAWYTSD------ 212 (276)
T ss_dssp -----------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTTSS------
T ss_pred -----------------------------------CCCcCCcCCCCCCc--------eEEeCCCCeEccccCCC------
Confidence 22678999999976 99999999999987632
Q ss_pred CcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHcccccccc
Q 039265 495 KSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNM 543 (708)
Q Consensus 495 ~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~ 543 (708)
..|..++|||||||+|||++|||+|++|++++++||++|++||++...
T Consensus 213 -~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 213 -TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp -SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred -CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 689999999999999999999999999999999999999999998643
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.9e-48 Score=403.70 Aligned_cols=239 Identities=33% Similarity=0.457 Sum_probs=204.5
Q ss_pred ccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCChHHH
Q 039265 102 VWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHGTHV 181 (708)
Q Consensus 102 ~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGThV 181 (708)
.|+ ..+|+||+|+|||||||++||+|.++ +...++|.. .+.|..||||||
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------~~~~~~~~~--------~~~d~~gHGT~v 73 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------AQMVKTYYY--------SSRDGNGHGTHC 73 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------EEEEEESSS--------CSSCSSSHHHHH
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------cccccCCCC--------CCCCCCCCHHHH
Confidence 344 37999999999999999999999753 334555651 356789999999
Q ss_pred HHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHCCC-------cEEEEccCCCC
Q 039265 182 AGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIEDGV-------DVLSISIGGGS 253 (708)
Q Consensus 182 AGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~g~-------dVIn~S~G~~~ 253 (708)
||||+|.. .||||+|+|+.+|++++. + +..+++++||+|++++++ +|||||||..
T Consensus 74 Agiia~~~--------------~GvAp~a~i~~~~v~~~~--g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~- 136 (279)
T 2pwa_A 74 AGTVGSRT--------------YGVAKKTQLFGVKVLDDN--GSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG- 136 (279)
T ss_dssp HHHHHCTT--------------TCSSTTCEEEEEECSCTT--SCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE-
T ss_pred HHHHHhcc--------------cccCCCCEEEEEEeEcCC--CCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCC-
Confidence 99999862 699999999999999876 5 788999999999999887 9999999975
Q ss_pred CCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCC-cccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCC
Q 039265 254 VPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNS-TISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFP 332 (708)
Q Consensus 254 ~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (708)
....+..++.++.++|++||+||||+|.... .+|+..|++|+|||++.
T Consensus 137 ---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------------------------- 185 (279)
T 2pwa_A 137 ---YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR---------------------------- 185 (279)
T ss_dssp ---CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC----------------------------
Confidence 2467788888999999999999999998653 45788999999999521
Q ss_pred CCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccc
Q 039265 333 QTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLP 412 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p 412 (708)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCC
Q 039265 413 ATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNT 492 (708)
Q Consensus 413 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~ 492 (708)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 186 -------------------------------------~~~~~~~S~~G~~~--------di~APG~~i~s~~~~------ 214 (279)
T 2pwa_A 186 -------------------------------------YDRRSSFSNYGSVL--------DIFGPGTDILSTWIG------ 214 (279)
T ss_dssp -------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEEETT------
T ss_pred -------------------------------------CCCcCCcCCCCCcc--------eEEEecCCeEEeecC------
Confidence 12678999999865 999999999999986
Q ss_pred CCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCCCCCCc
Q 039265 493 NPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGAGHVNP 568 (708)
Q Consensus 493 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~ 568 (708)
+.|..++|||||||||||++|||+|+ |++++.+||++|++||++... ..+|+|.+|+
T Consensus 215 ---~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~---------------~~~~~g~~n~ 271 (279)
T 2pwa_A 215 ---GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL---------------SNIPFGTVNL 271 (279)
T ss_dssp ---TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC---------------BSCCTTSCCE
T ss_pred ---CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc---------------CCCCCCCccE
Confidence 78999999999999999999999999 999999999999999997532 2467888777
No 29
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.1e-47 Score=427.65 Aligned_cols=293 Identities=16% Similarity=0.181 Sum_probs=219.2
Q ss_pred CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCC-CCCCCCCCCC
Q 039265 99 GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKG-TEPPIDVDGH 177 (708)
Q Consensus 99 ~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~-~~~~~d~~gH 177 (708)
+..+|+.+++|+||+|||||||||++||+|.++-.. ...++|......+. ...+.|..+|
T Consensus 27 ~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~-------------------~~~~d~~~~~~~p~~~~~~~d~~gH 87 (471)
T 1p8j_A 27 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDP-------------------GASFDVNDQDPDPQPRYTQMNDNRH 87 (471)
T ss_dssp CHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBCG-------------------GGCEETTTTBSCCCCCCCTTCTTCH
T ss_pred hHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccCc-------------------cCcccccCCCCCCCCccCCCCCCCc
Confidence 456999999999999999999999999999853100 01344554322111 1245688999
Q ss_pred hHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHH-CCCcEEEEccCCCCCC-
Q 039265 178 GTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIE-DGVDVLSISIGGGSVP- 255 (708)
Q Consensus 178 GThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~-~g~dVIn~S~G~~~~~- 255 (708)
||||||||||...++ .+ +.||||+|+|+.+|+++ +..+++++|++++++ ++++|||||||.....
T Consensus 88 GT~vAGiiaa~~~n~-------~g-~~GvAp~a~i~~~rv~~-----g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~~ 154 (471)
T 1p8j_A 88 GTRCAGEVAAVANNG-------VC-GVGVAYNARIGGVRMLD-----GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGK 154 (471)
T ss_dssp HHHHHHHHHCCSSSS-------SS-CCCTTTTSEEEEEECSS-----SCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSS
T ss_pred HHHHHHHHHeeccCC-------CC-CEEECCCCeEEEEEccC-----CchhHHHHHHHhhhccCCCeEEEeccCcCCCCC
Confidence 999999999975322 12 37999999999999985 235689999999999 8999999999975321
Q ss_pred ---CCCCHHHHHHHHHHh-----cCceEEEecCCCCCCCCc----ccCCCCceEEEcccccCcceEEEEEcCCCceeeee
Q 039265 256 ---FFNDSIAVGSFAAIQ-----KGIFVSCAAGNSGPFNST----ISNEAPWILTVGASTLDRSIVATAKLGNREEFDGE 323 (708)
Q Consensus 256 ---~~~~~~~~a~~~a~~-----~Gv~vV~AAGN~g~~~~~----~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~ 323 (708)
.....+..++.++.+ +|++||+||||+|..... ....++++|+|||++.
T Consensus 155 ~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~------------------- 215 (471)
T 1p8j_A 155 TVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ------------------- 215 (471)
T ss_dssp CCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT-------------------
T ss_pred cccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC-------------------
Confidence 112334455555543 699999999999976322 1234689999998521
Q ss_pred eccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcc
Q 039265 324 SVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFS 403 (708)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~ 403 (708)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEee
Q 039265 404 VIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAA 483 (708)
Q Consensus 404 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa 483 (708)
.+.++.||++||... ...+|...+||.+|+++
T Consensus 216 ----------------------------------------------~g~~a~~S~~g~~~~--~~~~~~~~~~g~~i~st 247 (471)
T 1p8j_A 216 ----------------------------------------------FGNVPWYSEACSSTL--ATTYSSGNQNEKQIVTT 247 (471)
T ss_dssp ----------------------------------------------TSCCCTTCCBCTTCC--EEEECCCSTTSCCEEEE
T ss_pred ----------------------------------------------CCCcccccCCCCcce--EEeCCCCCCCCCCEEEe
Confidence 126788999999872 34556666667899999
Q ss_pred ecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCccccccCCCCCCCCccCC
Q 039265 484 WFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIVDETLRPADIFAIGA 563 (708)
Q Consensus 484 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~G~ 563 (708)
.+.. +.|..++|||||||||||+||||+|++|+|++++||++|++||++++.....+............|||
T Consensus 248 ~~~~--------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~~G~ 319 (471)
T 1p8j_A 248 DLRQ--------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGY 319 (471)
T ss_dssp ETTT--------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTTTBT
T ss_pred eCCC--------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCCCCC
Confidence 8641 57999999999999999999999999999999999999999999986544333322222234579999
Q ss_pred CCCCcCCCCCCcccc
Q 039265 564 GHVNPSRANDPGLVY 578 (708)
Q Consensus 564 G~vn~~~Al~~~l~~ 578 (708)
|+||+.+||+....+
T Consensus 320 G~vda~~Av~~a~~~ 334 (471)
T 1p8j_A 320 GLLDAGAMVALAQNW 334 (471)
T ss_dssp CBCCHHHHHHHHHTC
T ss_pred EEEcHhHHHHHhhcc
Confidence 999999999865443
No 30
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=5.2e-47 Score=434.57 Aligned_cols=295 Identities=23% Similarity=0.206 Sum_probs=205.7
Q ss_pred CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCC-CCCC
Q 039265 99 GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPID-VDGH 177 (708)
Q Consensus 99 ~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d-~~gH 177 (708)
+..+|..+++|+||+|||||||||++||+|.++- ..+.++|..+.+ +..+.| +.||
T Consensus 59 ~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------~~~~~~~~~~~~---d~~p~d~~~gH 115 (600)
T 2oxa_A 59 LWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------RPGSKNVVTGSD---DPTPTDPDTGH 115 (600)
T ss_dssp CHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------CSCCBCTTTCSS---CCCCCSTTCCH
T ss_pred hHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------ccCceeccCCCC---CCCCCCCCCCC
Confidence 3568999999999999999999999999998531 112344554321 123344 7999
Q ss_pred hHHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCC--HHHHHHHHHHHHHCCCcEEEEccCCCCC-
Q 039265 178 GTHVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCT--ESDLLAGLDAAIEDGVDVLSISIGGGSV- 254 (708)
Q Consensus 178 GThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~--~~~i~~ai~~a~~~g~dVIn~S~G~~~~- 254 (708)
||||||||||. .++ .+ +.||||+|+|+.+|+++.. +.. ...+++....+..++++|||||||....
T Consensus 116 GT~vAGiiaa~-~n~-------~g-~~GVAp~A~l~~vkv~~~~--~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~~~~~ 184 (600)
T 2oxa_A 116 GTSVSGIIAAV-DNA-------IG-TKGIAPRAQLQGFNLLDDN--SQQLQKDWLYALGDSNASRDNRVFNHSYRMSVVD 184 (600)
T ss_dssp HHHHHHHHHCC-SSS-------SS-CCCSSTTCEEEEECTTSTT--CCCCHHHHHHHTTTSHHHHTCSEEEECCCCCCSS
T ss_pred ccHHHHHhhcc-cCC-------Cc-ceEEccCCceEEEeeecCc--ccchHHHHHHHHhhhhcccCCeEEEEeccCCCCC
Confidence 99999999997 221 11 3899999999999999876 433 2334444444778899999999998642
Q ss_pred CCCC----CHHHHHHHH---HHhcCceEEEecCCCCCCCCc----------------------ccCCCCceEEEcccccC
Q 039265 255 PFFN----DSIAVGSFA---AIQKGIFVSCAAGNSGPFNST----------------------ISNEAPWILTVGASTLD 305 (708)
Q Consensus 255 ~~~~----~~~~~a~~~---a~~~Gv~vV~AAGN~g~~~~~----------------------~~~~~p~vitVga~~~~ 305 (708)
.... ..+..++.+ +.++|++||+||||+|..... .++.++|+|+|||.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA~--- 261 (600)
T 2oxa_A 185 PRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSAL--- 261 (600)
T ss_dssp CCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEEE---
T ss_pred ccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEecc---
Confidence 1111 222222222 347899999999999864211 11223345555543
Q ss_pred cceEEEEEcCCCceeeeeeccCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHH
Q 039265 306 RSIVATAKLGNREEFDGESVFQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVK 385 (708)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~ 385 (708)
T Consensus 262 -------------------------------------------------------------------------------- 261 (600)
T 2oxa_A 262 -------------------------------------------------------------------------------- 261 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCCcEEEEecCCCCCcccccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCC
Q 039265 386 NAGGAAMILMNDEPNAFSVIADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLAS 465 (708)
Q Consensus 386 ~~ga~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~ 465 (708)
...+.++.||++||+.
T Consensus 262 --------------------------------------------------------------~~~g~~a~fS~~G~~v-- 277 (600)
T 2oxa_A 262 --------------------------------------------------------------NADGVRSSYSSVGSNI-- 277 (600)
T ss_dssp --------------------------------------------------------------CTTSSBCTTCCBCTTE--
T ss_pred --------------------------------------------------------------cCCCCcCCcCCCCCCe--
Confidence 1234788999999987
Q ss_pred CCCcCCceeeCCCcEEeeecC-------CC---C---------------CCCCCCcceeeccchhhhHHHHHHHHHHHHh
Q 039265 466 PGILKPDIIGPGLSILAAWFE-------PL---D---------------FNTNPKSIFNIMSGTSMACPHLSGIAALLKS 520 (708)
Q Consensus 466 ~g~~KPDI~APG~~I~sa~~~-------~~---~---------------~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q 520 (708)
||+|||++|.+..+. .. . ..+...+.|..++|||||||||||+||||+|
T Consensus 278 ------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s 351 (600)
T 2oxa_A 278 ------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMS 351 (600)
T ss_dssp ------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHH
T ss_pred ------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHH
Confidence 999999996443321 00 0 0011123489999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHccccccccCCccc--------------------cccCCCCCCCCccCCCCCCcCCCCCCcccccC
Q 039265 521 SHPYWSPAAIKSALMTTADLLNMNGERI--------------------VDETLRPADIFAIGAGHVNPSRANDPGLVYDI 580 (708)
Q Consensus 521 ~~p~~s~~~vk~~L~~TA~~~~~~~~~~--------------------~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~ 580 (708)
++|+|++++||++|++||++++..+.++ ..+......++.||||+||+.+||+.+..+..
T Consensus 352 ~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~~~~ 431 (600)
T 2oxa_A 352 AYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQP 431 (600)
T ss_dssp HSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTCCC
T ss_pred hCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHhccc
Confidence 9999999999999999999987544221 11122233568899999999999986654443
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=9.2e-47 Score=423.01 Aligned_cols=285 Identities=21% Similarity=0.257 Sum_probs=218.2
Q ss_pred CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCCh
Q 039265 99 GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHG 178 (708)
Q Consensus 99 ~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHG 178 (708)
+..+|+.+++|+||+|||||||||++||+|.++-.. .+.++|..+... ..+..|..|||
T Consensus 43 ~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~~-------------------~~~~d~~~~~~~--~~p~~d~~gHG 101 (503)
T 2id4_A 43 VLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCA-------------------EGSWDFNDNTNL--PKPRLSDDYHG 101 (503)
T ss_dssp CHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBCG-------------------GGCEETTTTBSC--CCCCSTTTTHH
T ss_pred hHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcccc-------------------cCcccCCCCCCC--CCCCCCCCChH
Confidence 456999999999999999999999999999864110 123455543211 12235788999
Q ss_pred HHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHHCCCcEEEEccCCCCCC---
Q 039265 179 THVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIEDGVDVLSISIGGGSVP--- 255 (708)
Q Consensus 179 ThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~~g~dVIn~S~G~~~~~--- 255 (708)
|||||||||...++ .+ +.||||+|+|+.+|+++.. ++..++++||+|+++++ +|||||||.....
T Consensus 102 T~vAGiiaa~~~n~-------~~-~~GvAp~a~i~~~rv~~~~---~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~~~~~ 169 (503)
T 2id4_A 102 TRCAGEIAAKKGNN-------FC-GVGVGYNAKISGIRILSGD---ITTEDEAASLIYGLDVN-DIYSCSWGPADDGRHL 169 (503)
T ss_dssp HHHHHHHHCCSSSS-------SS-CCCTTTTSEEEEEECTTSC---CCHHHHHHHTTTTTTTC-SEEEECEESCCSSSCC
T ss_pred HHHHHHHHhccCCC-------CC-cEEECCCCEEEEEEeeCCC---CChHHHHHHHHhHhhcC-CEEEeCCCcCCCCccc
Confidence 99999999975222 22 3799999999999998643 67888999999999988 9999999975321
Q ss_pred -CCCCHHHHHHHHHH-----hcCceEEEecCCCCCCC--Cccc--CCCCceEEEcccccCcceEEEEEcCCCceeeeeec
Q 039265 256 -FFNDSIAVGSFAAI-----QKGIFVSCAAGNSGPFN--STIS--NEAPWILTVGASTLDRSIVATAKLGNREEFDGESV 325 (708)
Q Consensus 256 -~~~~~~~~a~~~a~-----~~Gv~vV~AAGN~g~~~--~~~~--~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~ 325 (708)
.....+..++.++. .+|+++|+||||+|... +.++ ..++++|+|||++.
T Consensus 170 ~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~--------------------- 228 (503)
T 2id4_A 170 QGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH--------------------- 228 (503)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT---------------------
T ss_pred cCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC---------------------
Confidence 12234566666665 47999999999999753 2333 35678999998521
Q ss_pred cCCCCCCCCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccc
Q 039265 326 FQPKDFPQTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVI 405 (708)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~ 405 (708)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceee----CCCcEE
Q 039265 406 ADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIG----PGLSIL 481 (708)
Q Consensus 406 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~A----PG~~I~ 481 (708)
.+.++.||++||.. |++| ||..|+
T Consensus 229 --------------------------------------------~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~ 256 (503)
T 2id4_A 229 --------------------------------------------KDLHPPYSEGCSAV--------MAVTYSSGSGEYIH 256 (503)
T ss_dssp --------------------------------------------TSCCCTTCCCCTTE--------EEEEECSBTTBCEE
T ss_pred --------------------------------------------CCCcCCcCCCCCcc--------eEeecCCCCCCceE
Confidence 12678899999987 8887 899999
Q ss_pred eeecCCCCCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccC-CccccccCCCCCCCCc
Q 039265 482 AAWFEPLDFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMN-GERIVDETLRPADIFA 560 (708)
Q Consensus 482 sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~-~~~~~~~~~~~~~~~~ 560 (708)
++... .+.|..++|||||||||||++|||+|++|+|++++||++|++||+++... ...+............
T Consensus 257 st~~~--------~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~~~~~ 328 (503)
T 2id4_A 257 SSDIN--------GRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHR 328 (503)
T ss_dssp EECST--------TCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBTT
T ss_pred eecCC--------CCceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCccCcc
Confidence 99543 17899999999999999999999999999999999999999999988654 2222222222234578
Q ss_pred cCCCCCCcCCCCCCccc
Q 039265 561 IGAGHVNPSRANDPGLV 577 (708)
Q Consensus 561 ~G~G~vn~~~Al~~~l~ 577 (708)
||||+||+++||+....
T Consensus 329 ~G~G~vda~~Av~~a~~ 345 (503)
T 2id4_A 329 YGFGKIDAHKLIEMSKT 345 (503)
T ss_dssp TBTCBCCHHHHHHHHTS
T ss_pred cCCcEecHHHHHHHHhc
Confidence 99999999999985543
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=8.8e-47 Score=415.73 Aligned_cols=276 Identities=24% Similarity=0.268 Sum_probs=203.2
Q ss_pred ccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCC-CCCCCCCCCChHH
Q 039265 102 VWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKG-TEPPIDVDGHGTH 180 (708)
Q Consensus 102 ~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~-~~~~~d~~gHGTh 180 (708)
.|..+++|+||+|+|||||||++||+|.++. ....+++....+... ...+.|..|||||
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------~~~~~~~v~~~dg~~f~~~~~D~~GHGTh 77 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------MVTDFENVPEEDGTRFHRQASKCDSHGTH 77 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------EEEEEECCCCCC-------CTTTTHHHHH
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------cccCcccccCCCCccccCCCCCCCChHHH
Confidence 7888999999999999999999999998641 111112211100000 1345688999999
Q ss_pred HHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHC------CCcEEEEccCCCC
Q 039265 181 VAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIED------GVDVLSISIGGGS 253 (708)
Q Consensus 181 VAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~------g~dVIn~S~G~~~ 253 (708)
|||||+|.. .||||+|+|+.+|+++.. + ++.+++++||+|+++. +++|||||||+.
T Consensus 78 VAGIIag~~--------------~GVAP~A~L~~vkVl~~~--G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~- 140 (546)
T 2qtw_B 78 LAGVVSGRD--------------AGVAKGASMRSLRVLNCQ--GKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG- 140 (546)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCTT--SEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEE-
T ss_pred HHHHHhccC--------------CCcCCCCEEEEEEEECCC--CCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCC-
Confidence 999999873 699999999999999876 5 6788999999999984 899999999975
Q ss_pred CCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCC-cccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCC
Q 039265 254 VPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNS-TISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFP 332 (708)
Q Consensus 254 ~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (708)
+...+..++.++.++|++||+||||+|.+.. .+|+..|++|+|||++.....
T Consensus 141 ---~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------------------------ 193 (546)
T 2qtw_B 141 ---YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------------------ 193 (546)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB------------------------
T ss_pred ---CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc------------------------
Confidence 3467788888999999999999999997653 457889999999996321100
Q ss_pred CCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccc
Q 039265 333 QTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLP 412 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p 412 (708)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCC
Q 039265 413 ATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNT 492 (708)
Q Consensus 413 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~ 492 (708)
...-+.||++|+. |||+|||++|+++++...
T Consensus 194 -------------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~---- 224 (546)
T 2qtw_B 194 -------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS---- 224 (546)
T ss_dssp -------------------------------------CEETTEECCBSTT--------CCEEEECSSEEEECTTST----
T ss_pred -------------------------------------ccccCCcCCCCCc--------ceEEecCccEEeeccCCC----
Confidence 0001128999974 599999999999997632
Q ss_pred CCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccccCCcccc------ccC---CCCCCCCccCC
Q 039265 493 NPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLNMNGERIV------DET---LRPADIFAIGA 563 (708)
Q Consensus 493 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~~~~~~~~------~~~---~~~~~~~~~G~ 563 (708)
..|..++|||||||||||++|||+|++|+|++.|||++|++||.+....+..+. ... ..+.....+|+
T Consensus 225 ---~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~ 301 (546)
T 2qtw_B 225 ---TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGW 301 (546)
T ss_dssp ---TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTCC--C
T ss_pred ---CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhccCCcccccCC
Confidence 679999999999999999999999999999999999999999986532211010 000 11124567889
Q ss_pred CC--CCcCCCCC
Q 039265 564 GH--VNPSRAND 573 (708)
Q Consensus 564 G~--vn~~~Al~ 573 (708)
|+ .++..+..
T Consensus 302 ~l~~~~~w~a~s 313 (546)
T 2qtw_B 302 QLFCRTVWSAHS 313 (546)
T ss_dssp CCEEEEEECCCC
T ss_pred CcchhchhccCC
Confidence 98 77777765
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=3.7e-46 Score=387.82 Aligned_cols=228 Identities=31% Similarity=0.454 Sum_probs=197.4
Q ss_pred ccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCChHHH
Q 039265 102 VWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHGTHV 181 (708)
Q Consensus 102 ~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHGThV 181 (708)
.|+.. +|+||+|||||||||++||+|.++ +...++|.. ...|..||||||
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------~~~~~~~~~--------~~~d~~gHGT~v 74 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------AKQIKSYAS--------TARDGHGHGTHC 74 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------EEEEEECSS--------SSSCSSSHHHHH
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------cccccCCCC--------CCCCCCCcHHHH
Confidence 56666 999999999999999999999753 444555653 233889999999
Q ss_pred HHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHHHCC-------CcEEEEccCCCC
Q 039265 182 AGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGLDAAIEDG-------VDVLSISIGGGS 253 (708)
Q Consensus 182 AGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai~~a~~~g-------~dVIn~S~G~~~ 253 (708)
||||+|+. .||||+|+|+.+|+++.. + +..++++++|+|+++++ ++|||||||..
T Consensus 75 Agii~~~~--------------~GvAp~a~l~~~~v~~~~--~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~- 137 (279)
T 3f7m_A 75 AGTIGSKT--------------WGVAKKVSIFGVKVLDDS--GSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG- 137 (279)
T ss_dssp HHHHHCTT--------------TCSSTTCEEEEEECSCTT--SCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE-
T ss_pred HHHHhcCc--------------cccCCCCEEEEEEeeCCC--CCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC-
Confidence 99999863 699999999999999876 5 78889999999999986 89999999975
Q ss_pred CCCCCCHHHHHHHHHHhcCceEEEecCCCCCCCCcc-cCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCCCCCC
Q 039265 254 VPFFNDSIAVGSFAAIQKGIFVSCAAGNSGPFNSTI-SNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQPKDFP 332 (708)
Q Consensus 254 ~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~g~~~~~~-~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (708)
....+..++.++.++|++||+||||+|...... ++..+++|+|||.+.
T Consensus 138 ---~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------------------------- 186 (279)
T 3f7m_A 138 ---YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS---------------------------- 186 (279)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------------------------
T ss_pred ---ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC----------------------------
Confidence 446778888899999999999999999875444 788899999998521
Q ss_pred CCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccCCcccc
Q 039265 333 QTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIADPHVLP 412 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~p 412 (708)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecCCCCCCC
Q 039265 413 ATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFEPLDFNT 492 (708)
Q Consensus 413 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~~~~~~~ 492 (708)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 187 -------------------------------------~~~~~~~S~~g~~~--------di~ApG~~i~s~~~~------ 215 (279)
T 3f7m_A 187 -------------------------------------NDVRSTFSNYGRVV--------DIFAPGTSITSTWIG------ 215 (279)
T ss_dssp -------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECGG------
T ss_pred -------------------------------------CCCCCCCCCCCCCC--------eEEECCCCeEeecCC------
Confidence 12678999999865 999999999999987
Q ss_pred CCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccc
Q 039265 493 NPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLN 542 (708)
Q Consensus 493 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~ 542 (708)
+.|..++|||||||+|||++|||+|++|. ++++||++|++||++..
T Consensus 216 ---~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 216 ---GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp ---GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred ---CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 78999999999999999999999999999 99999999999999753
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.7e-44 Score=415.45 Aligned_cols=315 Identities=21% Similarity=0.177 Sum_probs=203.0
Q ss_pred CCcccccCCCCCccEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeEeeeecccCCCCCCCCCCCCCCCCh
Q 039265 99 GMGVWKESNFGKGVIIGILDGGINPDHPSFSDEGMPPPPAKWKGRCDFSTCNNKLIGARTFNIEGNVKGTEPPIDVDGHG 178 (708)
Q Consensus 99 ~~~~~~~g~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~w~~~~~~~~~~~kv~g~~~~~~~~~~~~~~~~~d~~gHG 178 (708)
+..+|.++++|+||+|||||||||++||||.++- ..+.++|..+.+. ..+..|+++||
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--------------------~~~~~~~~~~~~d--p~p~~~~~gHG 116 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--------------------RPGSKNVVTGSDD--PTPTDPDTAHG 116 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------CSCCBCTTTSSSC--CCCCSTTCCHH
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--------------------ccCcceeecCCCC--CCCCCCCCChH
Confidence 4568999999999999999999999999998531 1123344433221 12344678999
Q ss_pred HHHHHHhhcCcccCCcccCCCCcceEEecCCCEEEEEEeeeCCCCC-CCHHHHHHHH-HHHHHCCCcEEEEccCCCC-CC
Q 039265 179 THVAGTAAGAFVKNAESLGNAKGTAAGMAPYAHLAIYKVCFGGDVD-CTESDLLAGL-DAAIEDGVDVLSISIGGGS-VP 255 (708)
Q Consensus 179 ThVAGiiag~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~~~g-~~~~~i~~ai-~~a~~~g~dVIn~S~G~~~-~~ 255 (708)
|||||||||.. ++.+ +.||||+|+|+.+|++++. + +..++++.|+ +++..++++|||||||... .+
T Consensus 117 ThVAGiIAa~~--------n~~g-~~GVAp~A~l~~~rvl~~~--~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~~~~ 185 (600)
T 3hjr_A 117 TSVSGIIAAVD--------NAIG-TKGIAPRAQLQGFNLLDDN--SQQLQKDWLYALGDSNASRDNRVFNQSYGMSVVDP 185 (600)
T ss_dssp HHHHHHHHCCS--------SSSS-CCCSSTTCEEEEECTTSTT--CCCCHHHHHHHTTSSHHHHTCSEEEECCCCCCSSC
T ss_pred HHHHHHHhEeC--------CCCC-cEEeCCCCEEEEEEeecCC--CCccHHHHHHHhhhhhhhcCCCEEecccCccccCC
Confidence 99999999862 2223 3799999999999999876 4 6677777666 6778889999999999753 22
Q ss_pred CCCCH-----HHHHHHHH--HhcCceEEEecCCCCCCCCcccCCCCceEEEcccccCcceEEEEEcCCCceeeeeeccCC
Q 039265 256 FFNDS-----IAVGSFAA--IQKGIFVSCAAGNSGPFNSTISNEAPWILTVGASTLDRSIVATAKLGNREEFDGESVFQP 328 (708)
Q Consensus 256 ~~~~~-----~~~a~~~a--~~~Gv~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (708)
..... +..++..+ ..+|+++|+||||.+....... +.+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~--------------------------- 232 (600)
T 3hjr_A 186 RSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNR--------------------------- 232 (600)
T ss_dssp CCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEE---------------------------
T ss_pred ccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------ccccc---------------------------
Confidence 22222 22222222 2589999999999764311000 00000
Q ss_pred CCCCCCceeEEEecCCCCCCCCccCCCCCC-CCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcccccC
Q 039265 329 KDFPQTPLPLVYAGMNGKPESAFCGNGSLS-GIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFSVIAD 407 (708)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~ 407 (708)
.........+.|. .+ +......|.|..
T Consensus 233 ------------~g~~~~~~~~~~~---~d~~~~~~~~IsVgA------------------------------------- 260 (600)
T 3hjr_A 233 ------------TGNGPKLPFENSN---LDPSNSNFWNLVVSA------------------------------------- 260 (600)
T ss_dssp ------------ESSCCCCCSSBTT---SSGGGGSSSEEEEEE-------------------------------------
T ss_pred ------------CCCCCCCCccccc---ccCccccCcceEEee-------------------------------------
Confidence 0000000000010 00 000000111100
Q ss_pred CcccceEEEcHHHHHHHHHHHhcCCCceEEEEecceEeCCcCCCccccccCCCCCCCCCCCcCCceeeCCCcE-------
Q 039265 408 PHVLPATHVSNDAGLKIKSYINSTATPMATIIFKGTVIGNSLAPTVVSFSSRGPNLASPGILKPDIIGPGLSI------- 480 (708)
Q Consensus 408 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I------- 480 (708)
....+.++.||++|+.. +++|||.++
T Consensus 261 ---------------------------------------~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~ 293 (600)
T 3hjr_A 261 ---------------------------------------LNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAM 293 (600)
T ss_dssp ---------------------------------------ECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCE
T ss_pred ---------------------------------------ecCCCCEeecccCCcce--------eeccCCCCCCCCCcce
Confidence 12345788999999987 899998763
Q ss_pred -EeeecCCC-----------------CCCCCCCcceeeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHHHHHccccccc
Q 039265 481 -LAAWFEPL-----------------DFNTNPKSIFNIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKSALMTTADLLN 542 (708)
Q Consensus 481 -~sa~~~~~-----------------~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~~L~~TA~~~~ 542 (708)
.+..+... .........|..++|||||||||||++|||+|++|+|+++|||++|++||++++
T Consensus 294 vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d 373 (600)
T 3hjr_A 294 VTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVD 373 (600)
T ss_dssp EEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCS
T ss_pred eeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 22222211 011223356889999999999999999999999999999999999999999998
Q ss_pred cCCcccc--------------------ccCCCCCCCCccCCCCCCcCCCCCCcccc
Q 039265 543 MNGERIV--------------------DETLRPADIFAIGAGHVNPSRANDPGLVY 578 (708)
Q Consensus 543 ~~~~~~~--------------------~~~~~~~~~~~~G~G~vn~~~Al~~~l~~ 578 (708)
..+.|.. .+.........||||+||+.+||+.+..+
T Consensus 374 ~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A~~w 429 (600)
T 3hjr_A 374 AKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANH 429 (600)
T ss_dssp TTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTC
T ss_pred CCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHhhcC
Confidence 7665421 11122224578999999999999755433
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.92 E-value=1.5e-25 Score=251.57 Aligned_cols=96 Identities=27% Similarity=0.441 Sum_probs=77.7
Q ss_pred eEEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHH---CCCcEEEEccCCCCCCC---CCCHHHHHHHHHHhcCceEE
Q 039265 203 AAGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIE---DGVDVLSISIGGGSVPF---FNDSIAVGSFAAIQKGIFVS 276 (708)
Q Consensus 203 ~~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~---~g~dVIn~S~G~~~~~~---~~~~~~~a~~~a~~~Gv~vV 276 (708)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||.....+ +...+..++.+|..+||+||
T Consensus 274 ~~gvAp~a~i~~~~~~------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv 347 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVL 347 (552)
T ss_dssp HHHHCTTSEEEEEECC------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhccCCCCeEEEEEcC------CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEE
Confidence 4799999999999973 245689999999998 78999999999863221 23456677778889999999
Q ss_pred EecCCCCCCC--------CcccCCCCceEEEccccc
Q 039265 277 CAAGNSGPFN--------STISNEAPWILTVGASTL 304 (708)
Q Consensus 277 ~AAGN~g~~~--------~~~~~~~p~vitVga~~~ 304 (708)
+||||+|... ..+++.+|++++||+++.
T Consensus 348 ~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 348 AAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 9999999643 456789999999999753
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.87 E-value=1.9e-22 Score=215.71 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=80.5
Q ss_pred EEecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHH-CCCcEEEEccCCCCC----CCCCCHHHHHHHHHHhcCceEEEe
Q 039265 204 AGMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAIE-DGVDVLSISIGGGSV----PFFNDSIAVGSFAAIQKGIFVSCA 278 (708)
Q Consensus 204 ~GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~~-~g~dVIn~S~G~~~~----~~~~~~~~~a~~~a~~~Gv~vV~A 278 (708)
..+||+|+++.|++.+.. .+..++++.+|+||++ ++++|||||||.... ..+.+.+..++.+|..+||+||+|
T Consensus 90 g~~aP~a~~~~~~~~~~~--~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~A 167 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQS--ASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVS 167 (372)
T ss_dssp HHTTSCEEEEEEEEECTT--SSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhcCCCCcEEEEEeCCCC--CcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 357899999999998654 4677889999999998 899999999997531 122346677777888999999999
Q ss_pred cCCCCCCCC-------------cccCCCCceEEEccccc
Q 039265 279 AGNSGPFNS-------------TISNEAPWILTVGASTL 304 (708)
Q Consensus 279 AGN~g~~~~-------------~~~~~~p~vitVga~~~ 304 (708)
|||+|...+ .+++.+|++++||+++.
T Consensus 168 sGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 168 SGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp CCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred ECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 999997542 45688999999999754
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.10 E-value=6.8e-11 Score=104.00 Aligned_cols=77 Identities=12% Similarity=0.119 Sum_probs=67.5
Q ss_pred CceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCHHHHHHHhcCCCeEEEEecee
Q 039265 3 LQTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTEEEVQDMKKKNGFVSARPERK 82 (708)
Q Consensus 3 ~~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~~~i~~L~~~~~V~~V~~~~~ 82 (708)
.++|||+||+...+..+ ..|.+|+++++.+. ..+.++.|+|++.|+||+++++++++++|+++|+|.+||+|+.
T Consensus 37 p~~YIV~lk~~~~~~~~--~~h~~~l~s~~~~~----~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~ 110 (114)
T 2w2n_P 37 PGTYVVVLKEETHLSQS--ERTARRLQAQAARR----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 110 (114)
T ss_dssp EEEEEEEECTTCCHHHH--HHHHHHHHHHHHHT----TCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEE
T ss_pred CCcEEEEECCCCCHHHH--HHHHHHHHHHhhhc----ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCce
Confidence 47899999998865555 68899999988763 3577999999999999999999999999999999999999998
Q ss_pred ecc
Q 039265 83 VRL 85 (708)
Q Consensus 83 ~~~ 85 (708)
++.
T Consensus 111 v~~ 113 (114)
T 2w2n_P 111 VFA 113 (114)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.06 E-value=2e-10 Score=127.97 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=62.7
Q ss_pred EecCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHH--HCCCcEEEEccCCCCCC---CCCCHHHHHHHHHHhcCceEEEec
Q 039265 205 GMAPYAHLAIYKVCFGGDVDCTESDLLAGLDAAI--EDGVDVLSISIGGGSVP---FFNDSIAVGSFAAIQKGIFVSCAA 279 (708)
Q Consensus 205 GvAP~A~l~~~kv~~~~~~g~~~~~i~~ai~~a~--~~g~dVIn~S~G~~~~~---~~~~~~~~a~~~a~~~Gv~vV~AA 279 (708)
+++++..++.|...... ...+.++..+++.. .+-++|||+|||..... .+...+...+.++..+||.|++|+
T Consensus 263 a~~~~i~~~~~~~~g~~---~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~AS 339 (544)
T 3edy_A 263 SAGANISTWVYSSPGRH---EGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFAS 339 (544)
T ss_dssp HHSTTSEEEEECCCSCC---TTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred ccCCCceEEEEecCCcc---cccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 44555565555332111 12233444444433 24589999999986322 223445566667889999999999
Q ss_pred CCCCCCC----------CcccCCCCceEEEccccc
Q 039265 280 GNSGPFN----------STISNEAPWILTVGASTL 304 (708)
Q Consensus 280 GN~g~~~----------~~~~~~~p~vitVga~~~ 304 (708)
||+|... ..+++.+|+|++||+++.
T Consensus 340 GD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 340 GDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp CSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 9999753 256789999999999753
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.98 E-value=7.8e-10 Score=91.01 Aligned_cols=72 Identities=18% Similarity=0.217 Sum_probs=58.2
Q ss_pred CceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCHHHHHHHhcCCCeEEEEecee
Q 039265 3 LQTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTEEEVQDMKKKNGFVSARPERK 82 (708)
Q Consensus 3 ~~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~~~i~~L~~~~~V~~V~~~~~ 82 (708)
+++|||+||+......+ .++++++ .+.++.++|+. |+||++++++++++.|+++|+|.+||+++.
T Consensus 8 ~~~YIV~~k~~~~~~~~--------~~~~~~~------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~ 72 (80)
T 3cnq_P 8 EKKYIVGFKQGFKSCAK--------KEDVISE------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKL 72 (80)
T ss_dssp CCEEEEEECTTCCSHHH--------HHHHHHT------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCE
T ss_pred CCCEEEEECCCCChHHH--------HHHHHHH------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcE
Confidence 68999999998764221 1223332 36789999998 999999999999999999999999999999
Q ss_pred ecccccC
Q 039265 83 VRLQTTH 89 (708)
Q Consensus 83 ~~~~~~~ 89 (708)
++++++.
T Consensus 73 v~~~tt~ 79 (80)
T 3cnq_P 73 YRALSAT 79 (80)
T ss_dssp EEECCC-
T ss_pred EEEeeec
Confidence 9887654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.90 E-value=1.3e-09 Score=97.03 Aligned_cols=77 Identities=12% Similarity=0.119 Sum_probs=62.6
Q ss_pred CceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCHHHHHHHhcCCCeEEEEecee
Q 039265 3 LQTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTEEEVQDMKKKNGFVSARPERK 82 (708)
Q Consensus 3 ~~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~~~i~~L~~~~~V~~V~~~~~ 82 (708)
+++|||+||+......+ ..+.+++.+++.++ ..+.++.|+|++.|+||++++++++++.|+++|+|.+|++++.
T Consensus 47 p~~YIV~~K~~~~~~~~--~~~~~~l~~~~~~r----~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~ 120 (124)
T 2qtw_A 47 PGTYVVVLKEETHLSQS--ERTARRLQAQAARR----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 120 (124)
T ss_dssp EEEEEEEECTTCCHHHH--HHHHHHHHHHHHHT----TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEE
T ss_pred CCCEEEEECCCCCHHHH--HHHHHHHHHHHhhc----ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCce
Confidence 57999999998865444 44555555544432 3467999999999999999999999999999999999999998
Q ss_pred ecc
Q 039265 83 VRL 85 (708)
Q Consensus 83 ~~~ 85 (708)
++.
T Consensus 121 v~a 123 (124)
T 2qtw_A 121 VFA 123 (124)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.71 E-value=3.5e-08 Score=79.93 Aligned_cols=70 Identities=14% Similarity=0.131 Sum_probs=55.9
Q ss_pred ceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEec-ceeEEEEEEcCHHHHHHHhcC--CCeEEEEec
Q 039265 4 QTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYK-NVISGFAAKLTEEEVQDMKKK--NGFVSARPE 80 (708)
Q Consensus 4 ~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~-~~~~g~sv~~~~~~i~~L~~~--~~V~~V~~~ 80 (708)
++|||.||+......+ ..+.+++ .+. +.++.+.|+ .+|+||+++++++.++.|+++ |.|.+||+|
T Consensus 3 ~sYIV~lk~~~~~~~~--~~~~~~~----~~~------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D 70 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKI--RETKDEV----IAE------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (76)
T ss_dssp EEEEEEECTTCCHHHH--HHHHHHH----HHH------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred ceEEEEECCCCCHHHH--HHHHHHH----Hhh------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence 7899999998764444 3344443 222 457899994 799999999999999999999 899999999
Q ss_pred eeecc
Q 039265 81 RKVRL 85 (708)
Q Consensus 81 ~~~~~ 85 (708)
+.++.
T Consensus 71 ~~v~~ 75 (76)
T 1v5i_B 71 HVAHA 75 (76)
T ss_dssp CEEEC
T ss_pred cEEeC
Confidence 98754
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.70 E-value=9.9e-08 Score=90.99 Aligned_cols=94 Identities=16% Similarity=0.093 Sum_probs=74.7
Q ss_pred CCCccCCCCCCCCc-------ccCcEEEeecCCC-cchhhHHHHHHHcCCcEEEEecCCCCCcc--ccc--CCcccceEE
Q 039265 348 ESAFCGNGSLSGID-------VKGKVVLCERGGG-IARIFKGEQVKNAGGAAMILMNDEPNAFS--VIA--DPHVLPATH 415 (708)
Q Consensus 348 ~~~~c~~~~~~~~~-------~~g~ivl~~~g~~-~~~~~k~~~~~~~ga~~~i~~~~~~~~~~--~~~--~~~~~p~~~ 415 (708)
....|.+....... .+++|+|++|| . |+|.+|..+++++||.++|+||+...+.. .+. ....||+++
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG-~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~ 160 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRG-GGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIM 160 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESC-TTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECC-CCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEE
Confidence 45789887654322 47899999999 8 99999999999999999999998533221 111 234699999
Q ss_pred EcHHHHHHHHHHHhcCCCceEEEEecc
Q 039265 416 VSNDAGLKIKSYINSTATPMATIIFKG 442 (708)
Q Consensus 416 i~~~~g~~l~~~~~~~~~~~~~i~~~~ 442 (708)
|+..+|+.|++++.++...+++|++..
T Consensus 161 Is~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 161 IGNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp ECHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred ECHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 999999999999999988888777654
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.85 E-value=2.2e-05 Score=61.21 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=51.5
Q ss_pred ceEEEEeCCCCCCCcccchhHHHHHHHhccccccCCCCCCccEEEecceeEEEEEEcCHHHHHHHhcCCCeEEEEeceee
Q 039265 4 QTYIVSVQQPEGSDLAESEYVENWHRSFLPYSLESSDVQQRPFYSYKNVISGFAAKLTEEEVQDMKKKNGFVSARPERKV 83 (708)
Q Consensus 4 ~~YIV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~g~sv~~~~~~i~~L~~~~~V~~V~~~~~~ 83 (708)
-+|||.|++... . .+.+++ .+.++.++|. .+++++++++.+.++.|+++|+|.+||+|...
T Consensus 2 ~~~IV~f~~~~~---~---------~~~i~~------~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v 62 (65)
T 2z30_B 2 IRVIVSVDKAKF---N---------PHEVLG------IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQA 62 (65)
T ss_dssp EEEEEEECGGGC---C---------GGGGGG------GTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEE
T ss_pred eeEEEEEcCcch---h---------HHHHHH------CCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEE
Confidence 589999987521 1 123443 3889999998 89999999999999999999999999999876
Q ss_pred cc
Q 039265 84 RL 85 (708)
Q Consensus 84 ~~ 85 (708)
+.
T Consensus 63 ~a 64 (65)
T 2z30_B 63 VL 64 (65)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.21 E-value=0.021 Score=61.77 Aligned_cols=72 Identities=22% Similarity=0.428 Sum_probs=58.3
Q ss_pred CCCCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcc-ccc--CCcccceEEEcHHHHHHHHHHHh
Q 039265 357 LSGIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFS-VIA--DPHVLPATHVSNDAGLKIKSYIN 429 (708)
Q Consensus 357 ~~~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~-~~~--~~~~~p~~~i~~~~g~~l~~~~~ 429 (708)
+...+++|||+|+.++ .|.+.+|..+++++||.++|++++...... ... ....+|...++.++++.|++++.
T Consensus 108 ~~~~dv~GkIvlv~~g-~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 108 VAGKDLNGKIALIQRG-NISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTSCCTTSEEEEECC-SSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCCCCcCceEEEEeCC-CCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 3345799999999999 999999999999999999999988532111 111 34578999999999999999984
No 45
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.99 E-value=0.021 Score=50.19 Aligned_cols=71 Identities=13% Similarity=0.129 Sum_probs=54.3
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCceEEEEEEEE-cCceEEE
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQFAQGYITWV-SAKYSVR 700 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~i~~~-~~~~~~~ 700 (708)
..+.++.|+|.|+.+..|++.. +.- .+|+|+..++.+ |+++.++|+|.+... +.+.+.|.+. ++...+.
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~--~~~--F~i~P~~g~L~p-g~~~~i~V~F~P~~~-----g~~~~~l~v~~~~g~~~~ 111 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKT--CRP--FSIEPAIGTLNV-GESMQLEVEFEPQSV-----GDHSGRLIVCYDTGEKVF 111 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEEC--CTT--EEEESSEEEECT-TCEEEEEEEECCSSS-----BCCCCBCEEEESSSCEEC
T ss_pred eEEEEEEEEECCCCCEEEEEec--CCC--eEEECCcCEECC-CCEEEEEEEEEcCCC-----ccEEEEEEEEECCCCEEE
Confidence 7888899999999888887665 333 567899999998 999999999999763 4567766665 4444444
Q ss_pred Ee
Q 039265 701 SP 702 (708)
Q Consensus 701 ~P 702 (708)
++
T Consensus 112 v~ 113 (122)
T 2ys4_A 112 VS 113 (122)
T ss_dssp CE
T ss_pred EE
Confidence 44
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.69 E-value=0.05 Score=59.24 Aligned_cols=102 Identities=10% Similarity=0.049 Sum_probs=70.1
Q ss_pred CCceeEEEecCCCCCCCCccCCCCCCCCcccCcEEEeecCCCcc---------hhhH----HHHHHHcCCcEEEEecCCC
Q 039265 333 QTPLPLVYAGMNGKPESAFCGNGSLSGIDVKGKVVLCERGGGIA---------RIFK----GEQVKNAGGAAMILMNDEP 399 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~---------~~~k----~~~~~~~ga~~~i~~~~~~ 399 (708)
..+-++++..+. ..|.. ..+.+++|||||+.++ .|. +..| ..++.++||+++|++++..
T Consensus 105 ~vta~lV~v~~~-----~~~~~--~~~~dvkGKIVlv~~~-~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~ 176 (444)
T 3iib_A 105 GLSATIVRFDTL-----QDLQN--AEAGSLNDKIAFIDAK-TERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGT 176 (444)
T ss_dssp CEEEEEEEESSH-----HHHHT--SCTTTTTTCEEEECCC-CCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCS
T ss_pred CeEEEEEecCCH-----HHHhh--ccccccCccEEEEeCC-CCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCC
Confidence 446778876521 22322 2356899999999988 663 3444 4578999999999998643
Q ss_pred CCc-------cc-ccCCcccceEEEcHHHHHHHHHHHhcCCCceEEEEecc
Q 039265 400 NAF-------SV-IADPHVLPATHVSNDAGLKIKSYINSTATPMATIIFKG 442 (708)
Q Consensus 400 ~~~-------~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 442 (708)
... .. ......+|++.|+.++++.|++.+..+...++++....
T Consensus 177 ~~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 177 DHDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CCSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred cccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 321 11 11235799999999999999999987766666665443
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.51 E-value=0.027 Score=63.87 Aligned_cols=69 Identities=16% Similarity=0.200 Sum_probs=55.4
Q ss_pred CcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCCCcc-------------------cc---------------
Q 039265 360 IDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPNAFS-------------------VI--------------- 405 (708)
Q Consensus 360 ~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~-------------------~~--------------- 405 (708)
.+++|||+|+.+| .|.+.+|..+++.+||+|+|+|++...... ..
T Consensus 128 vdv~GkIvlv~~g-~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~ 206 (640)
T 3kas_A 128 TPVNGSIVIVRAG-KITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRS 206 (640)
T ss_dssp SCCTTSEEEEESC-SSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSS
T ss_pred cccCCcEEEEecC-CCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCcccccccccccccc
Confidence 5799999999999 999999999999999999999987532100 00
Q ss_pred cCCcccceEEEcHHHHHHHHHHHh
Q 039265 406 ADPHVLPATHVSNDAGLKIKSYIN 429 (708)
Q Consensus 406 ~~~~~~p~~~i~~~~g~~l~~~~~ 429 (708)
.....||+..|+..+++.|++.+.
T Consensus 207 ~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 207 SGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cCCCCCCEEecCHHHHHHHHHHcc
Confidence 002368999999999999988764
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.56 E-value=0.058 Score=61.82 Aligned_cols=71 Identities=24% Similarity=0.363 Sum_probs=56.3
Q ss_pred CCcccCcEEEeecCCCcchhhHHHHHHHcCCcEEEEecCCCC----C------------------ccc----ccC-----
Q 039265 359 GIDVKGKVVLCERGGGIARIFKGEQVKNAGGAAMILMNDEPN----A------------------FSV----IAD----- 407 (708)
Q Consensus 359 ~~~~~g~ivl~~~g~~~~~~~k~~~~~~~ga~~~i~~~~~~~----~------------------~~~----~~~----- 407 (708)
..+++|||+|+++| .|.+.+|..+++.+||+|+|+|++..+ + ... ..+
T Consensus 150 ~~~v~GkIvlv~~G-~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG 228 (707)
T 3fed_A 150 GINCTGKIVIARYG-KIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPG 228 (707)
T ss_dssp CCCCTTCEEEEECC-SSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTT
T ss_pred CCCCCCeEEEEECC-CCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCC
Confidence 45799999999999 899999999999999999999986210 0 000 001
Q ss_pred -----------------CcccceEEEcHHHHHHHHHHHhc
Q 039265 408 -----------------PHVLPATHVSNDAGLKIKSYINS 430 (708)
Q Consensus 408 -----------------~~~~p~~~i~~~~g~~l~~~~~~ 430 (708)
...||+..|+..+++.|+..+..
T Consensus 229 ~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 229 YPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp SCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 24689999999999999998764
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=90.98 E-value=2.3 Score=37.98 Aligned_cols=87 Identities=14% Similarity=0.028 Sum_probs=61.0
Q ss_pred CceEEEEEEEecCCCceeEEEEEeCC----CCeEEEeecCeEEEccCCcEEEEEEEEEecCC----CCCCCceEEEEEEE
Q 039265 621 PAQTFTRTVTNVGQVYSSYAVNVVAP----QGVVVSVKPSKLYFSKVNQKATYSVTFTRSGS----GYTSGQFAQGYITW 692 (708)
Q Consensus 621 ~~~~~~~tv~n~g~~~~ty~~~~~~~----~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~G~i~~ 692 (708)
..++.+++|+|.|..+.+|++..... ..--++|+|..-++.| |++++++|++..... ...+...++--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~P-ge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEP-NETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECT-TCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCC-CCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 36788889999999999999985321 1112456799999998 999999999986331 00001233555666
Q ss_pred E-cCceEEEEeEEEEeC
Q 039265 693 V-SAKYSVRSPISVRLQ 708 (708)
Q Consensus 693 ~-~~~~~~~~P~~~~~~ 708 (708)
. .++....+|+...|.
T Consensus 122 ~Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNYL 138 (140)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EeecCCcEEEEEecccc
Confidence 5 678888999988774
No 50
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=88.99 E-value=1.8 Score=37.33 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=46.1
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecCC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGS 678 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~ 678 (708)
.-.+++.|.|....+.+|++++...+++.+. .+..+++++ ++..++.|.+..+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~~-g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVEP-GEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEECT-TCEEEEEEEEEECGG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEECC-CCEEEEEEEEEEChH
Confidence 6678889999999999999999987776654 356799988 999999999988664
No 51
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=87.49 E-value=0.26 Score=59.64 Aligned_cols=24 Identities=29% Similarity=0.601 Sum_probs=22.8
Q ss_pred CCCCCccEEEEEcCCCCCCCCCCC
Q 039265 106 SNFGKGVIIGILDGGINPDHPSFS 129 (708)
Q Consensus 106 g~~G~Gv~VaVIDtGid~~Hp~f~ 129 (708)
.+.|+||+|||+|||||+.+|-|.
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 578999999999999999999997
No 52
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.72 E-value=0.73 Score=39.27 Aligned_cols=66 Identities=9% Similarity=0.090 Sum_probs=49.4
Q ss_pred ceEEEEEEEecCCCceeEEEEEeC-CCCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCceEEEEEEEE
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVA-PQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQFAQGYITWV 693 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~-~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~i~~~ 693 (708)
..+.+++++|.|+.+..|++.... +.+...+++|..-.+.+ |++++++|+|.+... +.+.=.|.+.
T Consensus 27 ~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~p-g~~~~i~V~f~~~~~-----g~f~~~i~v~ 93 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEP-SGVQAIQISFSSIIL-----GNFEEEFLVN 93 (112)
T ss_dssp CEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECT-TBCCEEEEEECCCCC-----EEEEEEECEE
T ss_pred EEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECC-CCEEEEEEEEECCCc-----ceEEEEEEEE
Confidence 678888999999999999883211 11234677899999998 999999999999642 3455556665
No 53
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=85.39 E-value=4.3 Score=39.15 Aligned_cols=78 Identities=10% Similarity=0.020 Sum_probs=55.1
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCceEEEEEEEEc----C-c
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQFAQGYITWVS----A-K 696 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~i~~~~----~-~ 696 (708)
..+.+++++|.|+.+.++++.+ .|..+.+. +..-.+.+ |++.+++|++++..... .+...+.|.+.. + .
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~--~~~~~I~P-G~~g~I~vt~~~~~~~~--~G~~~~~i~v~~~~~~~~~ 93 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVS-LPSFVSLD--DRAFRLQA-REPRELNLSLAVPRNMP--PGMKDEPLVLEVTSPETGK 93 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEE-CCTTEECS--CCEEEECS-SSCEEEEEEECCCTTCC--SEEEEEEEEEEEECTTTCC
T ss_pred cceEEEEEEeCCCCceEEEecc-CCCceEee--eCcceeCC-CCceEEEEEEcchhccc--CCceeeEEEEEEEcCCCCc
Confidence 6677889999999988888654 36665554 44455566 99999999999877644 367778788763 2 2
Q ss_pred -eEEEEeEEE
Q 039265 697 -YSVRSPISV 705 (708)
Q Consensus 697 -~~~~~P~~~ 705 (708)
...++|+..
T Consensus 94 ~~~~~i~v~g 103 (220)
T 2qsv_A 94 KAVDSVMVSL 103 (220)
T ss_dssp EEEEEEEEEE
T ss_pred ccccEEEEEE
Confidence 244666654
No 54
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=85.19 E-value=0.42 Score=51.79 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=26.0
Q ss_pred CCCccccccCCCCCCCCCCCcCCceeeCCCcEEeeecC
Q 039265 449 LAPTVVSFSSRGPNLASPGILKPDIIGPGLSILAAWFE 486 (708)
Q Consensus 449 ~~~~~a~fSs~Gp~~~~~g~~KPDI~APG~~I~sa~~~ 486 (708)
..+.++.||++||.. ||+|||++|+++++.
T Consensus 182 ~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 182 SNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp TTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 356799999999865 999999999999874
No 55
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=81.05 E-value=8.1 Score=40.43 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=59.6
Q ss_pred CCCceEEEEEEEecCCCceeEEEEEeCCCCeE----EEeecCeEEEccCCcEEEEEEEEEecCCCC----CCCceEEEEE
Q 039265 619 LGPAQTFTRTVTNVGQVYSSYAVNVVAPQGVV----VSVKPSKLYFSKVNQKATYSVTFTRSGSGY----TSGQFAQGYI 690 (708)
Q Consensus 619 ~~~~~~~~~tv~n~g~~~~ty~~~~~~~~~~~----v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~G~i 690 (708)
|...++-++||+|+|..+.+|++.-....... ++|+|..-++.+ |++++++|++....... .+....+--|
T Consensus 44 ~~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~P-ge~~~i~l~~~v~~~~~~~ln~g~~~l~diL 122 (366)
T 3qis_A 44 FRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEP-NETVDISLDVYVSKDSVTILNSGEDKIEDIL 122 (366)
T ss_dssp BTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECT-TCEEEEEEEECBCTTTHHHHHHTSSCSCEEE
T ss_pred eCCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECC-CCEEEEEEEEEECHHHHHHHhcCccccceEE
Confidence 33478888899999999999999754322211 566899999998 99999999998766200 0012234445
Q ss_pred EEE-cCceEEEEeEEEEe
Q 039265 691 TWV-SAKYSVRSPISVRL 707 (708)
Q Consensus 691 ~~~-~~~~~~~~P~~~~~ 707 (708)
++. .++....+|+-..|
T Consensus 123 vL~ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 123 VLHLDRGKDYFLTISGNY 140 (366)
T ss_dssp EEEETTSCEEEEEEEEEE
T ss_pred EEEEeCCCcEEEEecccc
Confidence 554 56666677776665
No 56
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=72.56 E-value=10 Score=33.02 Aligned_cols=53 Identities=19% Similarity=0.186 Sum_probs=45.0
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSG 677 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 677 (708)
..+-.++|+|.++...-|++....|.-.. |.|..=.+.+ +++..+.|++.+..
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~y~--VrP~~G~i~P-~~s~~v~V~~~~~~ 80 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGVIDP-GSIVTVSVMLQPFD 80 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGGEE--EESCEEEECT-TCEEEEEEEECCCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCceE--EeCCCcEECC-CCeEEEEEEECcCc
Confidence 56777899999999999999999887765 5788888877 99999999998753
No 57
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=72.49 E-value=11 Score=32.68 Aligned_cols=52 Identities=17% Similarity=0.237 Sum_probs=44.5
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEec
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRS 676 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 676 (708)
..+-.++|+|.++...-|++....|.-.. |.|..=.+.+ +++..+.|++.+.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y~--VrP~~Gii~P-~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRLS--VDPPCGVLDP-KEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTEE--EESCEEEECT-TCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcEE--EECCCeEECC-CCEEEEEEEecCC
Confidence 45667899999999999999999998765 5799888887 9999999999884
No 58
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=72.17 E-value=21 Score=31.12 Aligned_cols=51 Identities=16% Similarity=0.229 Sum_probs=36.5
Q ss_pred CceEEEEEEEecCCCc-eeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEe
Q 039265 621 PAQTFTRTVTNVGQVY-SSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTR 675 (708)
Q Consensus 621 ~~~~~~~tv~n~g~~~-~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~ 675 (708)
...+++.+|+|.|... ..|++.+-. +|-.+.-. .+.+.+ |+++++++++.+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~La~-G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSLGP-KEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEECT-TCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--EeccCC-CCeEEEEEEEEc
Confidence 3899999999999764 557777654 45444322 446776 999998888875
No 59
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=67.37 E-value=15 Score=33.17 Aligned_cols=53 Identities=21% Similarity=0.164 Sum_probs=44.9
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSG 677 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 677 (708)
..+-.++|+|..+...-|++.-..|.-.. |.|..=.+.+ +++.+++|++.+..
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI~P-~~s~~V~V~lq~~~ 88 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEKYR--VKPSNSSCDP-GASIDIIVSPHGGL 88 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTTEE--EESSEEEECT-TCEEEEEEEECSSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCcee--ecCCCcEECC-CCeEEEEEEecCcc
Confidence 44667899999999999999999998765 5799888887 99999999998753
No 60
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=67.24 E-value=13 Score=33.31 Aligned_cols=53 Identities=19% Similarity=0.188 Sum_probs=44.8
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSG 677 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 677 (708)
..+-.++|+|.++...-|++.-..|.-.. |.|..=.+.+ +++..+.|++.+..
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI~P-~~s~~v~V~l~~~~ 84 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGIIDP-GSIVTVSVMLQPFD 84 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSEE--EESSEEECCT-TCEEEEEEEECCCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccEE--EcCCCcEECC-CCeEEEEEEECCCc
Confidence 55667899999999999999999998765 5688877877 99999999998753
No 61
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=62.42 E-value=47 Score=36.86 Aligned_cols=80 Identities=18% Similarity=0.052 Sum_probs=52.7
Q ss_pred ccCcccccCCCceEEEEEEEecCCCceeE-EEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCceEEEE
Q 039265 611 NYPSFSVTLGPAQTFTRTVTNVGQVYSSY-AVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQFAQGY 689 (708)
Q Consensus 611 n~ps~~~~~~~~~~~~~tv~n~g~~~~ty-~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~ 689 (708)
..|.+++.-.++.+++.+|+|.+..+..- ++++..|.+.++.. ....+.+ |++++++++|+.+.... .+.|.=-
T Consensus 363 ~~~~~~~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~t~~~~vt~~~~~~--~g~y~l~ 437 (601)
T 1w8o_A 363 TIPDVALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLMP-GRQAKGQVTITVPAGTT--PGRYRVG 437 (601)
T ss_dssp ECCCEEECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBCT-TCEEEEEEEEECCTTCC--CEEEEEE
T ss_pred cCccceecCCceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccCC-CCceEEEEEEecCCCCC--CCcEEee
Confidence 34555555555888899999986644332 45567788888776 3455666 89999988888876433 2444444
Q ss_pred EEEEcC
Q 039265 690 ITWVSA 695 (708)
Q Consensus 690 i~~~~~ 695 (708)
+.+...
T Consensus 438 ~~~~~~ 443 (601)
T 1w8o_A 438 ATLRTS 443 (601)
T ss_dssp EEEEET
T ss_pred EEEEec
Confidence 555543
No 62
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=58.75 E-value=28 Score=29.32 Aligned_cols=50 Identities=12% Similarity=0.102 Sum_probs=42.2
Q ss_pred EEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEec
Q 039265 624 TFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRS 676 (708)
Q Consensus 624 ~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~ 676 (708)
+-+++|+|.++....|++.-..|.-.. |.|..=.+.+ |++.++.|+..+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I~P-~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFVDP-SGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEECT-TEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEECC-CCeEEEEEEeCCC
Confidence 456799999999999999988887765 5799888877 9999999998874
No 63
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=58.59 E-value=35 Score=29.13 Aligned_cols=52 Identities=12% Similarity=0.121 Sum_probs=43.2
Q ss_pred eEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecC
Q 039265 623 QTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSG 677 (708)
Q Consensus 623 ~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 677 (708)
.+-+++|+|.++....|++.-..|.-.. |.|..=.+.+ |++.++.|+..+..
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~Yr--VrP~~G~I~P-g~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEHYR--VRPVYGFVDA-KGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTTEE--EECSEEEECT-TCEEEEEEEECSCC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCceE--EcCCceEECC-CCeEEEEEEeCCCC
Confidence 4566799999999999999988887765 5698887877 99999999998753
No 64
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=47.47 E-value=50 Score=31.47 Aligned_cols=76 Identities=8% Similarity=0.005 Sum_probs=48.4
Q ss_pred CceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCce----EEEEEEEE-c-
Q 039265 621 PAQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQF----AQGYITWV-S- 694 (708)
Q Consensus 621 ~~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~G~i~~~-~- 694 (708)
...+.+++++|.|+.+...+-......-..+. +..-.+.+ |++.+++|++++.... +. ....|.+. +
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~--~~~~~i~P-Ge~~~i~v~~~~~~~~----g~~~~~~~~~i~v~~N~ 206 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAV--PDRTEIKP-GGSTLLRIAVDPQVMK----AEGWQSIAADISIICND 206 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEEEEECSTTEEEE--ESCSEECT-TCEEEEEEEECHHHHH----HTTCSEEEEEEEEEESC
T ss_pred CeEEEEEEEEECCCCCEEEEEEEeCCCCEeee--cCCccCCC-CCEEEEEEEEecCCCC----CcccceeccEEEEEECC
Confidence 37888899999999887764333333344443 44455666 9999999999985531 23 56667665 3
Q ss_pred -CceEEEEeE
Q 039265 695 -AKYSVRSPI 703 (708)
Q Consensus 695 -~~~~~~~P~ 703 (708)
....+++.|
T Consensus 207 ~~~p~~~l~i 216 (220)
T 2qsv_A 207 PQAPLRRIKV 216 (220)
T ss_dssp TTCSEEEEEE
T ss_pred CCCcEEEEEE
Confidence 233445554
No 65
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=43.12 E-value=66 Score=36.70 Aligned_cols=55 Identities=22% Similarity=0.234 Sum_probs=36.1
Q ss_pred ceEEEEEEEecCCCceeEEEE--EeCCCCe-----EEEeecCeEEEccCCcEEEEEEEEEecC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVN--VVAPQGV-----VVSVKPSKLYFSKVNQKATYSVTFTRSG 677 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~--~~~~~~~-----~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 677 (708)
..+++++|+|+|+.+-.-.+. +..|.+- ..-.--.++.+.+ ||+++++++|+...
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~p-Ges~~V~~~l~~~~ 675 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLTP-GQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEECT-TCEEEEEEEEEGGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeCC-CCeEEEEEEEcHHH
Confidence 578889999999876544433 3444321 1111233566777 99999999998754
No 66
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=43.09 E-value=95 Score=26.55 Aligned_cols=53 Identities=9% Similarity=0.089 Sum_probs=36.3
Q ss_pred ceEEEEEEEecCCCce--------eEEEEEeCCCCeEEE---------eecCeEEEccCCcEEEEEEEEEe
Q 039265 622 AQTFTRTVTNVGQVYS--------SYAVNVVAPQGVVVS---------VKPSKLYFSKVNQKATYSVTFTR 675 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~--------ty~~~~~~~~~~~v~---------v~p~~~~~~~~~~~~~~~v~~~~ 675 (708)
...++++|+|.++.+. .|.+.+....|-.|- -.....++.+ |++++|+.++..
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~p-GE~~~f~~~w~~ 88 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLES-GETYDFSDVWKE 88 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECT-TCEEEEEEEESS
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECC-CCEEEEEEEeCC
Confidence 7888899999987653 344555554554433 1233567777 999999999994
No 67
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=37.30 E-value=1.3e+02 Score=29.42 Aligned_cols=55 Identities=16% Similarity=0.129 Sum_probs=40.0
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCC--------CeEEEeecCeEEEccCCcEEEEEEEEEecC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQ--------GVVVSVKPSKLYFSKVNQKATYSVTFTRSG 677 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~--------~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 677 (708)
.+..+++|+|.++.+.-.++-++..+ ...+-|+|..+++.+ |+++.+.|......
T Consensus 43 ~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~p-g~~q~lRI~~~~~~ 105 (257)
T 3q48_A 43 EREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEP-NGGAVLRIAYLKAP 105 (257)
T ss_dssp CSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECT-TEEEEEEEEECCCC
T ss_pred CcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEECC-CCceEEEEEECCCC
Confidence 66788899999876544444454321 234778999999998 99999999776543
No 68
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=31.95 E-value=14 Score=31.73 Aligned_cols=55 Identities=18% Similarity=0.151 Sum_probs=36.3
Q ss_pred eEEEEEEEecCCCceeEEEEEe-CCCCeEEEeecCeEEEcc-CCcEEEEEEEEEecC
Q 039265 623 QTFTRTVTNVGQVYSSYAVNVV-APQGVVVSVKPSKLYFSK-VNQKATYSVTFTRSG 677 (708)
Q Consensus 623 ~~~~~tv~n~g~~~~ty~~~~~-~~~~~~v~v~p~~~~~~~-~~~~~~~~v~~~~~~ 677 (708)
.....-++|.+....+..+.+. .|.|+.++++|+++++.- .-.+++|.|++....
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 3444556677665556666777 689999999999887763 134566666655443
No 69
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=30.97 E-value=15 Score=27.32 Aligned_cols=29 Identities=14% Similarity=0.089 Sum_probs=23.9
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHcccccc
Q 039265 513 GIAALLKSSHPYWSPAAIKSALMTTADLL 541 (708)
Q Consensus 513 G~aALl~q~~p~~s~~~vk~~L~~TA~~~ 541 (708)
-....|++.||+++...|+..|...-..+
T Consensus 11 e~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 11 EDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 45677899999999999999998865544
No 70
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=30.50 E-value=43 Score=38.31 Aligned_cols=55 Identities=11% Similarity=0.115 Sum_probs=34.8
Q ss_pred ceEEEEEEEecCCCceeEEEE--EeCCCC-e----EEEeecCeE-EEccCCcEEEEEEEEEecC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVN--VVAPQG-V----VVSVKPSKL-YFSKVNQKATYSVTFTRSG 677 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~--~~~~~~-~----~v~v~p~~~-~~~~~~~~~~~~v~~~~~~ 677 (708)
..+++++|+|+|+.+..-.+. +..|.+ + ..-.--.++ .+.+ ||+++++++|+...
T Consensus 616 ~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~p-Ges~~V~~~l~~~~ 678 (721)
T 2x41_A 616 TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNP-GESEEVVLEIPVRD 678 (721)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCT-TCEEEEEEEEEGGG
T ss_pred eEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCC-CCeEEEEEEECHHH
Confidence 678899999999865443333 444432 1 111112344 5666 99999999999754
No 71
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=29.43 E-value=46 Score=26.96 Aligned_cols=28 Identities=29% Similarity=0.443 Sum_probs=22.8
Q ss_pred EEeecCeEEEccCCcEEEEEEEEEecCCC
Q 039265 651 VSVKPSKLYFSKVNQKATYSVTFTRSGSG 679 (708)
Q Consensus 651 v~v~p~~~~~~~~~~~~~~~v~~~~~~~~ 679 (708)
|++.|..+++.. |++.+++.++.|.+..
T Consensus 9 i~l~~~~~~l~v-G~t~~L~atv~P~~At 36 (91)
T 2l04_A 9 MTVTPASTSVVK-GQSTTLTVAFQPEGVT 36 (91)
T ss_dssp EEEECCCEEEET-TCEEEEEEEECCSSCC
T ss_pred EEEeCCceEEEc-CCEEEEEEEEeccccC
Confidence 566788899987 9999999999887653
No 72
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=28.53 E-value=2.3e+02 Score=23.30 Aligned_cols=65 Identities=18% Similarity=0.149 Sum_probs=43.5
Q ss_pred cccccCCC-ceEEEEEEEecCCCceeEEEEEeCCCCeEEEeecCeEEEccCCcEEEEEEEEEecCCCCCCCceEEEEEEE
Q 039265 614 SFSVTLGP-AQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSGYTSGQFAQGYITW 692 (708)
Q Consensus 614 s~~~~~~~-~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~i~~ 692 (708)
.+++.|.. ...+++||+|-......|.-.+..|.-+. +.+.. .++-+++|.+.... .++.|...+
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~~i~-------IdLng-e~sG~Y~IeI~~~~------~~LtG~F~i 100 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTSIVM-------IDMSS-CEKGEYTIHIILND------CLLEGTFTV 100 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCSEEE-------EECTT-SCSEEEEEEEEETT------EEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCcEEE-------EEcCC-CcCceEEEEEEeCC------cEEEEEEEe
Confidence 44556654 67788899998767788888776654222 22332 34778999998854 677886654
No 73
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=27.65 E-value=38 Score=30.48 Aligned_cols=32 Identities=19% Similarity=0.194 Sum_probs=26.6
Q ss_pred eccchhhhHHHHHHHHHHHHhcCCCCCHHHHHH
Q 039265 500 IMSGTSMACPHLSGIAALLKSSHPYWSPAAIKS 532 (708)
Q Consensus 500 ~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~ 532 (708)
.+.|-| =|+.|-|.+|||++.+-+.+|++|.+
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 344555 47999999999999999999999865
No 74
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=25.16 E-value=2.2e+02 Score=26.96 Aligned_cols=57 Identities=11% Similarity=0.029 Sum_probs=39.8
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCC-----CCeEEEeecCeEEEccCCcEEEEEEEEEecCCC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAP-----QGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSG 679 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~-----~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~ 679 (708)
.+..+++|+|.++.+.--+..+..- ...-+-++|.-+++.+ |+.+.+.|..+....+
T Consensus 27 ~k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl~p-~~~q~lRI~~~~~~LP 88 (218)
T 4ay0_A 27 AAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDA-KQQNSLRIAQAGGVFP 88 (218)
T ss_dssp CSCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEECT-TCEEEEEEEECSCCCC
T ss_pred CcEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEeCC-CCceEEEEEecCCCCC
Confidence 5677889999887654444445421 1123667899999998 9999999977654433
No 75
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=24.75 E-value=2.6e+02 Score=26.38 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=38.9
Q ss_pred ceEEEEEEEecCCC-ceeEEEEEeCCC-----CeEEEeecCeEEEccCCcEEEEEEEEEe
Q 039265 622 AQTFTRTVTNVGQV-YSSYAVNVVAPQ-----GVVVSVKPSKLYFSKVNQKATYSVTFTR 675 (708)
Q Consensus 622 ~~~~~~tv~n~g~~-~~ty~~~~~~~~-----~~~v~v~p~~~~~~~~~~~~~~~v~~~~ 675 (708)
.+..+++|+|.++. +.--++.++... ...+-++|..+++.+ ++++.+.|....
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl~p-~~~q~lRI~~~~ 73 (218)
T 2xg5_A 15 EKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEP-GAKSMVRLSTTP 73 (218)
T ss_dssp SSEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEECT-TCEEEEEEEECG
T ss_pred CCEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEECC-CCceEEEEEecC
Confidence 67778899999876 544455555432 223678899999998 999999998776
No 76
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=23.88 E-value=2.5e+02 Score=27.10 Aligned_cols=67 Identities=7% Similarity=-0.010 Sum_probs=43.5
Q ss_pred cccccCcccccCCCceEEEEEEEecCCCceeEEEEEeCCCCeEEEee-----cCeEEEccCCcEEEEEEEEEec
Q 039265 608 AQLNYPSFSVTLGPAQTFTRTVTNVGQVYSSYAVNVVAPQGVVVSVK-----PSKLYFSKVNQKATYSVTFTRS 676 (708)
Q Consensus 608 ~~~n~ps~~~~~~~~~~~~~tv~n~g~~~~ty~~~~~~~~~~~v~v~-----p~~~~~~~~~~~~~~~v~~~~~ 676 (708)
-++|+|.. +.-+....+..+|.|..+.....++.+...+++..... ..++.+++ ++++++...+.+.
T Consensus 84 v~~~LP~s-v~rGE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v~a-~~~~~v~f~i~p~ 155 (252)
T 3hrz_B 84 IDLQMPYS-VVKNEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPIKA-LSSRAVPFVIVPL 155 (252)
T ss_dssp EEECCCSC-EETTCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEECT-TEEEEEEEEEEEC
T ss_pred EEcCCCcE-EeeCCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEECC-CCeEEEEEEEEec
Confidence 46788864 33334788888999998887777777776555443211 22466666 6777777766653
No 77
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=23.49 E-value=2.7e+02 Score=25.97 Aligned_cols=53 Identities=15% Similarity=0.046 Sum_probs=38.0
Q ss_pred ceEEEEEEEecCCC-ceeEEEEEeCC---CCeEEEeecCeEEEccCCcEEEEEEEE-Ee
Q 039265 622 AQTFTRTVTNVGQV-YSSYAVNVVAP---QGVVVSVKPSKLYFSKVNQKATYSVTF-TR 675 (708)
Q Consensus 622 ~~~~~~tv~n~g~~-~~ty~~~~~~~---~~~~v~v~p~~~~~~~~~~~~~~~v~~-~~ 675 (708)
.+..+++|+|.++. +.--++-++.. ....+-++|..+++.+ ++++.+.|.. ..
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~pfivtPPl~rl~p-~~~q~lRI~~~~~ 72 (205)
T 1klf_A 15 QKQVQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKG-KKENTLRILDATN 72 (205)
T ss_dssp CSEEEEEEEECCSSCCEEEEEEEEETTSCCCSSEEEESSEEEECS-SEEEEEEEEECSC
T ss_pred CcEEEEEEEcCCCCCcEEEEEEEecCCCCccCCEEEcCCeEEECC-CCceEEEEEecCC
Confidence 57778899999875 44444444432 2244678899999998 9999999877 54
No 78
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=23.22 E-value=2.6e+02 Score=26.85 Aligned_cols=55 Identities=16% Similarity=0.077 Sum_probs=38.4
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCCC---CeEEEeecCeEEEccCCcEEEEEEEEEecC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAPQ---GVVVSVKPSKLYFSKVNQKATYSVTFTRSG 677 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~~---~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 677 (708)
.+..+++|+|.++.+.--++.+.... ..-+-++|..+++.+ ++.+.+.|..+...
T Consensus 37 ~k~~sl~l~N~~~~P~LvQsWv~~~~~~~~~pfivtPPlfRlep-~~~q~lRIi~~~~~ 94 (239)
T 4djm_A 37 SSGETLTVINDQDYPMLVQSEVLSEDQKSPAPFVVTPPLFRLDG-QQSSRLRIVRTGGE 94 (239)
T ss_dssp SSCEEEEEEECSSSCEEEEEEEECTTSSSBCSEEEESSEEEECT-TEEEEEEEEECSCC
T ss_pred CCEEEEEEEeCCCCcEEEEEEEEcCCCCccCCEEEcCCeEEECC-CCceEEEEEECCCC
Confidence 66778899998875433344444321 234678899999998 99999999776543
No 79
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=23.18 E-value=38 Score=30.01 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=27.5
Q ss_pred eeccchhhhHHHHHHHHHHHHhcCCCCCHHHHHH
Q 039265 499 NIMSGTSMACPHLSGIAALLKSSHPYWSPAAIKS 532 (708)
Q Consensus 499 ~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~vk~ 532 (708)
-.+.|-| =|+.|-|.+|||.+.+-+.+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4455666 47999999999999999999999864
No 80
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=23.07 E-value=2.4e+02 Score=26.75 Aligned_cols=57 Identities=18% Similarity=0.078 Sum_probs=39.5
Q ss_pred ceEEEEEEEecCCCceeEEEEEeCC---CCeEEEeecCeEEEccCCcEEEEEEEEEecCCC
Q 039265 622 AQTFTRTVTNVGQVYSSYAVNVVAP---QGVVVSVKPSKLYFSKVNQKATYSVTFTRSGSG 679 (708)
Q Consensus 622 ~~~~~~tv~n~g~~~~ty~~~~~~~---~~~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~ 679 (708)
.+..+++|+|.++.+.--+..++.. ....+-++|..+++.+ ++++.+.|.......+
T Consensus 27 ~k~~sl~l~N~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p-~~~q~lRI~~~~~~lP 86 (221)
T 2co7_B 27 TAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRLEA-NQQSQLRIVRTGGDMP 86 (221)
T ss_dssp SSCEEEEEECCSSSCEEEEEEEEETTSSSBCSEEEESSEEEECT-TCEEEEEEEECCCCCC
T ss_pred CCEEEEEEEcCCCCcEEEEEEEecCCCCccCCEEEeCCEEEECC-CCceEEEEEECCCCCC
Confidence 5677789999887644444444432 2234678899999998 9999999987663333
No 81
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=20.69 E-value=1.8e+02 Score=33.85 Aligned_cols=52 Identities=19% Similarity=0.158 Sum_probs=33.1
Q ss_pred ceEEEEEEEecC-CCceeEEEE--EeCCCC-----eEEEeecCeEEEccCCcEEEEEEEEE
Q 039265 622 AQTFTRTVTNVG-QVYSSYAVN--VVAPQG-----VVVSVKPSKLYFSKVNQKATYSVTFT 674 (708)
Q Consensus 622 ~~~~~~tv~n~g-~~~~ty~~~--~~~~~~-----~~v~v~p~~~~~~~~~~~~~~~v~~~ 674 (708)
..+++++|+|+| +.+..-.+. +..|.+ +.--.--.++.+.+ ||+++++++|+
T Consensus 736 ~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~p-Ges~~V~~~l~ 795 (845)
T 3abz_A 736 KIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEP-GEKKTVNIDLE 795 (845)
T ss_dssp EEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECT-TCEEEEEEEEE
T ss_pred eEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECC-CCEEEEEEEeC
Confidence 678999999999 655443333 333322 11111233566777 99999999999
Done!