Query         039267
Match_columns 502
No_of_seqs    295 out of 2706
Neff          8.1 
Searched_HMMs 29240
Date          Mon Mar 25 13:20:49 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039267hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4fih_A Serine/threonine-protei 100.0 4.8E-57 1.6E-61  458.1  22.6  262  136-491    73-334 (346)
  2 4fie_A Serine/threonine-protei 100.0 9.2E-56 3.1E-60  459.5  23.5  263  135-491   149-411 (423)
  3 3fpq_A Serine/threonine-protei 100.0 6.8E-56 2.3E-60  440.5  20.5  258  139-486    28-288 (290)
  4 4b9d_A Serine/threonine-protei 100.0 1.1E-56 3.7E-61  456.2  12.1  263  135-488    22-284 (350)
  5 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.1E-56 1.1E-60  445.8  14.8  260  135-487    30-297 (311)
  6 3hyh_A Carbon catabolite-derep 100.0 1.9E-55 6.5E-60  433.8  17.6  257  137-487    13-269 (275)
  7 3ubd_A Ribosomal protein S6 ki 100.0 5.4E-55 1.9E-59  436.3  20.1  260  134-487    21-288 (304)
  8 3omv_A RAF proto-oncogene seri 100.0 1.9E-54 6.4E-59  433.3  17.7  267  130-484    29-303 (307)
  9 4g3f_A NF-kappa-beta-inducing  100.0 6.1E-54 2.1E-58  434.0  19.5  257  135-489    56-331 (336)
 10 4g31_A Eukaryotic translation  100.0 1.9E-53 6.5E-58  425.5  17.4  268  137-488     5-287 (299)
 11 4gt4_A Tyrosine-protein kinase 100.0 2.8E-53 9.5E-58  425.8  17.3  274  131-481    20-300 (308)
 12 4asz_A BDNF/NT-3 growth factor 100.0 4.6E-54 1.6E-58  429.7  10.1  272  132-486     8-286 (299)
 13 4b99_A Mitogen-activated prote 100.0   1E-52 3.4E-57  436.0  20.0  282  137-491    54-355 (398)
 14 4aoj_A High affinity nerve gro 100.0 1.2E-52 4.2E-57  424.9  17.9  271  132-481    36-313 (329)
 15 4ase_A Vascular endothelial gr 100.0 6.6E-52 2.2E-56  423.1  19.0  281  130-481    57-341 (353)
 16 4f9c_A Cell division cycle 7-r 100.0   1E-51 3.5E-56  423.7  19.9  268  136-487    20-359 (361)
 17 3v5w_A G-protein coupled recep 100.0 1.5E-50 5.1E-55  439.0  22.1  265  133-486   185-455 (689)
 18 3hmm_A TGF-beta receptor type- 100.0 4.7E-50 1.6E-54  402.0  16.0  269  137-481     3-291 (303)
 19 3uto_A Twitchin; kinase, muscl 100.0 3.7E-49 1.3E-53  427.8  17.3  262  136-490   156-420 (573)
 20 3fe3_A MAP/microtubule affinit 100.0 1.5E-46 5.1E-51  380.7  19.7  262  134-489    12-273 (328)
 21 3fxz_A Serine/threonine-protei 100.0 2.7E-46 9.2E-51  373.0  19.1  262  135-490    18-279 (297)
 22 3zgw_A Maternal embryonic leuc 100.0 2.7E-46 9.3E-51  381.7  18.7  259  135-487     8-267 (347)
 23 1o6l_A RAC-beta serine/threoni 100.0 1.1E-45 3.9E-50  375.6  20.7  261  134-487     2-267 (337)
 24 3o0g_A Cell division protein k 100.0 9.8E-46 3.4E-50  367.1  19.0  273  137-488     2-290 (292)
 25 4dc2_A Protein kinase C IOTA t 100.0 6.8E-45 2.3E-49  377.6  25.0  272  133-487    48-325 (396)
 26 2yab_A Death-associated protei 100.0 3.1E-45 1.1E-49  375.9  21.5  265  136-488    11-280 (361)
 27 4aw2_A Serine/threonine-protei 100.0 6.3E-46 2.2E-50  390.1  14.6  273  132-487    69-345 (437)
 28 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-45 1.1E-49  374.7  19.5  262  132-487    18-287 (353)
 29 2zv2_A Calcium/calmodulin-depe 100.0 7.4E-45 2.5E-49  361.8  21.6  288  134-486    10-298 (298)
 30 2pmi_A Negative RE, cyclin-dep 100.0 4.3E-45 1.5E-49  367.5  19.4  286  136-496     4-309 (317)
 31 3oz6_A Mitogen-activated prote 100.0 1.8E-45 6.1E-50  380.6  17.0  276  136-492     8-340 (388)
 32 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-44 5.1E-49  362.6  22.9  257  134-486    54-310 (311)
 33 4ejn_A RAC-alpha serine/threon 100.0 8.2E-45 2.8E-49  382.8  22.0  263  132-487   143-411 (446)
 34 3v8s_A RHO-associated protein  100.0 1.2E-45 4.2E-50  384.9  15.4  269  132-487    64-336 (410)
 35 3rp9_A Mitogen-activated prote 100.0 5.3E-45 1.8E-49  385.3  20.4  282  136-491    52-407 (458)
 36 3niz_A Rhodanese family protei 100.0 5.8E-45   2E-49  365.7  19.1  276  135-490    19-310 (311)
 37 1ob3_A PFPK5, cell division co 100.0 7.6E-45 2.6E-49  360.2  19.6  271  137-487     2-287 (288)
 38 1fot_A TPK1 delta, CAMP-depend 100.0 4.8E-45 1.6E-49  368.1  18.3  258  134-487     3-265 (318)
 39 3a62_A Ribosomal protein S6 ki 100.0 1.1E-44 3.8E-49  366.4  20.9  264  132-487    12-283 (327)
 40 2r5t_A Serine/threonine-protei 100.0 2.9E-44 9.9E-49  370.2  24.3  262  133-486    34-299 (373)
 41 3a8x_A Protein kinase C IOTA t 100.0 3.1E-44 1.1E-48  366.1  24.2  271  134-487     6-282 (345)
 42 1xjd_A Protein kinase C, theta 100.0 1.1E-44 3.8E-49  369.5  20.5  263  133-487    13-276 (345)
 43 2y0a_A Death-associated protei 100.0 1.5E-44   5E-49  365.3  20.8  266  136-489    10-280 (326)
 44 4fr4_A YANK1, serine/threonine 100.0 4.9E-45 1.7E-49  377.3  17.6  268  132-487    10-278 (384)
 45 3tki_A Serine/threonine-protei 100.0 4.9E-45 1.7E-49  368.5  17.1  261  137-487     7-268 (323)
 46 3g33_A Cell division protein k 100.0 3.3E-44 1.1E-48  358.8  22.8  287  134-489     6-305 (308)
 47 2c30_A Serine/threonine-protei 100.0 1.9E-44 6.5E-49  363.7  20.9  260  137-490    45-304 (321)
 48 3mtl_A Cell division protein k 100.0 1.1E-44 3.8E-49  365.6  19.1  274  137-490     2-291 (324)
 49 3c0i_A Peripheral plasma membr 100.0 4.5E-45 1.5E-49  373.0  16.0  268  135-486    22-292 (351)
 50 3n9x_A Phosphotransferase; mal 100.0 9.7E-45 3.3E-49  380.9  18.9  284  136-493    25-374 (432)
 51 3qd2_B Eukaryotic translation  100.0 6.8E-45 2.3E-49  366.0  16.7  266  137-486     6-331 (332)
 52 4agu_A Cyclin-dependent kinase 100.0 2.5E-44 8.5E-49  359.7  20.0  275  137-490     3-294 (311)
 53 2i0e_A Protein kinase C-beta I 100.0 4.3E-44 1.5E-48  366.3  22.1  262  132-486    15-282 (353)
 54 3soa_A Calcium/calmodulin-depe 100.0 1.6E-44 5.5E-49  380.4  19.1  260  136-486    10-273 (444)
 55 1tki_A Titin; serine kinase, m 100.0 4.6E-45 1.6E-49  368.5  14.0  259  136-488     4-265 (321)
 56 3uc3_A Serine/threonine-protei 100.0 1.1E-44 3.9E-49  371.6  17.1  261  134-487    17-281 (361)
 57 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-44 4.3E-49  370.2  17.3  268  134-488    51-329 (355)
 58 2bdw_A Hypothetical protein K1 100.0 1.6E-44 5.4E-49  370.7  17.8  259  136-486    28-290 (362)
 59 3gni_B Strad alpha; kinase fol 100.0 1.7E-44 5.8E-49  373.3  18.1  281  134-490    22-343 (389)
 60 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.7E-44   6E-49  365.0  17.8  274  134-487    31-325 (329)
 61 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.6E-45 2.3E-49  369.9  13.9  260  135-488     7-266 (336)
 62 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.2E-44 7.4E-49  368.1  17.6  257  134-486    38-299 (350)
 63 2w4o_A Calcium/calmodulin-depe 100.0 5.8E-44   2E-48  364.6  20.7  260  134-489    50-314 (349)
 64 3llt_A Serine/threonine kinase 100.0   5E-44 1.7E-48  365.3  20.0  273  133-485    31-360 (360)
 65 3fme_A Dual specificity mitoge 100.0 3.9E-44 1.3E-48  354.2  18.3  273  132-489     2-275 (290)
 66 3nsz_A CK II alpha, casein kin 100.0 4.6E-44 1.6E-48  360.8  18.9  269  135-489    34-328 (330)
 67 3ttj_A Mitogen-activated prote 100.0   3E-44   1E-48  380.5  18.2  278  136-491    61-366 (464)
 68 3fdn_A Serine/threonine-protei 100.0 8.2E-44 2.8E-48  350.7  19.9  265  132-491     4-268 (279)
 69 3i6u_A CDS1, serine/threonine- 100.0 3.5E-44 1.2E-48  375.2  18.2  269  135-487   133-406 (419)
 70 2vd5_A DMPK protein; serine/th 100.0 2.3E-44 7.7E-49  375.7  15.7  273  132-487    56-334 (412)
 71 3mi9_A Cell division protein k 100.0 7.2E-44 2.5E-48  363.1  19.0  286  136-491    16-322 (351)
 72 3is5_A Calcium-dependent prote 100.0   1E-43 3.4E-48  351.8  19.4  261  137-487    22-285 (285)
 73 1t4h_A Serine/threonine-protei 100.0 1.9E-43 6.3E-48  350.1  21.3  263  134-486    23-288 (290)
 74 3kk8_A Calcium/calmodulin depe 100.0 8.3E-44 2.8E-48  351.1  18.7  265  136-492     5-273 (284)
 75 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-44 4.4E-49  365.7  13.0  259  138-489     9-279 (325)
 76 2vwi_A Serine/threonine-protei 100.0 7.7E-44 2.6E-48  354.0  17.8  285  131-490     9-297 (303)
 77 3dls_A PAS domain-containing s 100.0 5.6E-44 1.9E-48  362.7  17.1  260  136-489    23-283 (335)
 78 3eb0_A Putative uncharacterize 100.0 1.4E-43 4.7E-48  366.0  20.3  279  134-487     4-328 (383)
 79 2qr7_A Ribosomal protein S6 ki 100.0 3.1E-44   1E-48  365.8  15.0  259  136-487    21-284 (342)
 80 1cm8_A Phosphorylated MAP kina 100.0 1.2E-43   4E-48  364.8  19.5  278  136-491    24-318 (367)
 81 2eue_A Carbon catabolite derep 100.0 3.6E-44 1.2E-48  352.5  14.9  260  135-488    11-270 (275)
 82 2a2a_A Death-associated protei 100.0 1.6E-43 5.6E-48  356.3  19.7  268  136-491    11-283 (321)
 83 2y7j_A Phosphorylase B kinase  100.0 2.3E-43 7.9E-48  362.3  20.3  269  137-486    94-365 (365)
 84 3hko_A Calcium/calmodulin-depe 100.0 4.1E-44 1.4E-48  363.4  14.5  291  136-490    25-340 (345)
 85 2y94_A 5'-AMP-activated protei 100.0 6.1E-44 2.1E-48  378.8  16.3  261  133-487    12-273 (476)
 86 3f3z_A Calcium/calmodulin-depe 100.0 1.8E-43   6E-48  347.7  18.4  259  137-490     9-271 (277)
 87 4aaa_A Cyclin-dependent kinase 100.0 6.5E-44 2.2E-48  360.7  15.5  276  134-488    22-314 (331)
 88 1nxk_A MAP kinase-activated pr 100.0 3.6E-43 1.2E-47  365.4  21.4  261  136-488    60-329 (400)
 89 1j1b_A Glycogen synthase kinas 100.0 2.4E-43 8.3E-48  369.0  20.2  278  135-489    52-345 (420)
 90 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-43 4.3E-48  349.0  16.8  258  136-488    10-287 (289)
 91 3dbq_A Dual specificity protei 100.0 8.8E-44   3E-48  361.9  16.0  274  134-489     6-282 (343)
 92 3kvw_A DYRK2, dual specificity 100.0 1.7E-43 5.9E-48  371.1  18.5  278  134-490    94-418 (429)
 93 3qyz_A Mitogen-activated prote 100.0 3.7E-43 1.3E-47  360.2  20.3  281  136-492    26-325 (364)
 94 3mwu_A Calmodulin-domain prote 100.0 1.2E-43 4.2E-48  377.8  17.4  261  137-490    22-286 (486)
 95 3lij_A Calcium/calmodulin depe 100.0 2.6E-43 8.9E-48  376.2  19.9  260  135-487    35-298 (494)
 96 3q5i_A Protein kinase; CDPK, m 100.0 1.4E-42 4.8E-47  371.4  25.3  274  135-490    34-311 (504)
 97 3an0_A Dual specificity mitoge 100.0 2.6E-43 8.9E-48  357.2  18.6  276  131-491    45-321 (340)
 98 3eqc_A Dual specificity mitoge 100.0   2E-43   7E-48  361.0  17.9  274  132-488    28-332 (360)
 99 2r3i_A Cell division protein k 100.0 7.5E-43 2.6E-47  346.7  21.0  277  136-490     2-293 (299)
100 1kob_A Twitchin; kinase, intra 100.0 1.9E-43 6.6E-48  365.8  17.2  260  137-489    51-313 (387)
101 3q60_A ROP5B; pseudokinase, tr 100.0 3.8E-44 1.3E-48  368.4  11.8  286  135-497    60-369 (371)
102 2rku_A Serine/threonine-protei 100.0 2.9E-43 9.8E-48  349.5  17.5  272  135-499    13-284 (294)
103 3nyv_A Calmodulin-domain prote 100.0 1.7E-43 5.9E-48  376.4  16.6  263  134-488    23-289 (484)
104 2ac3_A MAP kinase-interacting  100.0 8.6E-43 2.9E-47  349.3  20.7  280  136-490    11-305 (316)
105 3pfq_A PKC-B, PKC-beta, protei 100.0 9.3E-43 3.2E-47  384.9  23.0  263  133-487   337-604 (674)
106 3cok_A Serine/threonine-protei 100.0 2.5E-43 8.4E-48  346.8  16.2  262  136-489    10-271 (278)
107 1u5q_A Serine/threonine protei 100.0 2.6E-43 8.8E-48  359.8  17.0  263  136-490    53-315 (348)
108 3byv_A Rhoptry kinase; malaria 100.0 2.1E-44   7E-49  371.4   8.8  288  134-494    70-373 (377)
109 2yex_A Serine/threonine-protei 100.0 2.9E-43 9.9E-48  345.4  16.4  264  137-490     7-271 (276)
110 1ua2_A CAK, cell division prot 100.0 3.2E-43 1.1E-47  358.2  17.2  278  136-489     9-300 (346)
111 3e3p_A Protein kinase, putativ 100.0 2.8E-43 9.6E-48  359.3  16.6  285  134-491    20-325 (360)
112 4euu_A Serine/threonine-protei 100.0 1.3E-43 4.6E-48  356.4  14.0  281  134-483     6-305 (319)
113 2owb_A Serine/threonine-protei 100.0 3.3E-43 1.1E-47  356.5  17.0  272  135-499    39-310 (335)
114 2acx_A G protein-coupled recep 100.0 1.2E-43 4.1E-48  382.9  14.1  265  133-487   180-451 (576)
115 2x4f_A Myosin light chain kina 100.0 1.9E-43 6.5E-48  364.1  14.9  258  139-489    91-351 (373)
116 2h6d_A 5'-AMP-activated protei 100.0 3.9E-43 1.3E-47  344.8  16.4  263  133-488     7-269 (276)
117 2zmd_A Dual specificity protei 100.0 3.3E-43 1.1E-47  364.5  16.1  274  134-489    53-329 (390)
118 3lm5_A Serine/threonine-protei 100.0 3.6E-43 1.2E-47  355.0  15.9  263  137-488    28-295 (327)
119 3rgf_A Cyclin-dependent kinase 100.0 2.3E-43 7.7E-48  367.1  14.4  283  137-491    20-344 (405)
120 4e7w_A Glycogen synthase kinas 100.0   1E-42 3.4E-47  361.3  19.1  278  134-489    37-330 (394)
121 2vgo_A Serine/threonine-protei 100.0 3.3E-43 1.1E-47  347.3  14.7  263  132-489     9-271 (284)
122 2fst_X Mitogen-activated prote 100.0 3.6E-43 1.2E-47  361.3  15.4  278  137-492    29-323 (367)
123 2ycf_A Serine/threonine-protei 100.0 4.5E-43 1.6E-47  353.0  15.8  269  136-488     9-282 (322)
124 1zy4_A Serine/threonine-protei 100.0 4.4E-43 1.5E-47  347.9  15.3  269  137-489     6-292 (303)
125 1phk_A Phosphorylase kinase; g 100.0 1.4E-42 4.7E-47  344.7  18.9  276  136-490    16-293 (298)
126 2xrw_A Mitogen-activated prote 100.0 4.5E-43 1.6E-47  360.7  15.7  278  136-491    24-329 (371)
127 3ork_A Serine/threonine protei 100.0 3.2E-43 1.1E-47  352.6  14.1  269  134-486     9-279 (311)
128 2jam_A Calcium/calmodulin-depe 100.0 1.1E-42 3.7E-47  347.1  17.9  258  136-488     8-269 (304)
129 2i6l_A Mitogen-activated prote 100.0 6.6E-43 2.3E-47  349.7  16.0  284  136-493    10-318 (320)
130 3c4z_A Rhodopsin kinase; Ser/T 100.0   7E-43 2.4E-47  375.5  17.0  268  133-487   181-455 (543)
131 3com_A Serine/threonine-protei 100.0 2.5E-42 8.5E-47  345.7  19.4  264  134-491    26-289 (314)
132 3bhy_A Death-associated protei 100.0   9E-43 3.1E-47  343.4  15.9  264  136-487     4-272 (283)
133 3cbl_A C-FES, proto-oncogene t 100.0 7.3E-43 2.5E-47  360.0  15.6  258  131-480   108-367 (377)
134 2vx3_A Dual specificity tyrosi 100.0 1.1E-42 3.9E-47  359.0  16.9  278  133-489    50-381 (382)
135 4exu_A Mitogen-activated prote 100.0 2.4E-42 8.3E-47  355.3  19.2  276  137-491    42-334 (371)
136 2x7f_A TRAF2 and NCK-interacti 100.0 2.9E-42 9.9E-47  347.0  19.3  276  134-491    21-297 (326)
137 1wak_A Serine/threonine-protei 100.0 6.7E-43 2.3E-47  360.4  14.7  280  134-486    34-397 (397)
138 1blx_A Cyclin-dependent kinase 100.0 3.6E-42 1.2E-46  346.0  19.7  284  135-490     9-306 (326)
139 3p86_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46  345.7  18.8  266  131-487    31-300 (309)
140 4hcu_A Tyrosine-protein kinase 100.0 1.7E-42 5.7E-47  339.5  16.2  257  130-481     3-260 (269)
141 2psq_A Fibroblast growth facto 100.0 1.6E-42 5.5E-47  356.7  16.8  281  131-481    75-358 (370)
142 2j7t_A Serine/threonine-protei 100.0 1.8E-42 6.1E-47  344.6  16.5  270  134-490    16-285 (302)
143 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.5E-42 8.6E-47  337.8  17.3  256  131-481     2-258 (268)
144 3a7i_A MST3 kinase, serine/thr 100.0 2.5E-42 8.6E-47  344.1  17.5  263  134-491    19-281 (303)
145 4eqm_A Protein kinase; transfe 100.0 2.8E-42 9.7E-47  343.3  17.7  266  134-486     8-273 (294)
146 3vhe_A Vascular endothelial gr 100.0 6.5E-43 2.2E-47  356.5  13.1  278  131-481    16-349 (359)
147 2clq_A Mitogen-activated prote 100.0   2E-42 6.7E-47  342.8  15.9  264  138-489    23-287 (295)
148 3soc_A Activin receptor type-2 100.0 4.6E-43 1.6E-47  353.5  11.5  272  132-480    19-311 (322)
149 2b9h_A MAP kinase FUS3, mitoge 100.0 5.8E-42   2E-46  348.7  19.6  279  136-490    10-315 (353)
150 3ugc_A Tyrosine-protein kinase 100.0 1.4E-42 4.6E-47  344.7  14.5  270  133-480     6-284 (295)
151 3pg1_A Mitogen-activated prote 100.0 5.3E-42 1.8E-46  350.6  19.2  290  134-490    19-326 (362)
152 2wtk_C Serine/threonine-protei 100.0   1E-42 3.5E-47  346.8  13.0  269  137-491     5-274 (305)
153 3s95_A LIMK-1, LIM domain kina 100.0 1.5E-42 5.1E-47  347.1  13.8  257  133-480     6-275 (310)
154 1z57_A Dual specificity protei 100.0 4.9E-42 1.7E-46  345.8  17.5  276  134-488    11-336 (339)
155 2wei_A Calmodulin-domain prote 100.0 3.7E-42 1.3E-46  340.5  16.3  260  137-489    22-285 (287)
156 1opk_A P150, C-ABL, proto-onco 100.0 2.2E-42 7.5E-47  369.2  15.0  259  130-481   213-472 (495)
157 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-42 4.8E-47  356.7  12.6  271  131-487    65-345 (367)
158 3coi_A Mitogen-activated prote 100.0 9.6E-42 3.3E-46  347.9  18.7  275  137-490    24-315 (353)
159 2w5a_A Serine/threonine-protei 100.0 2.6E-42 8.8E-47  339.5  13.5  265  136-488     5-275 (279)
160 3qup_A Tyrosine-protein kinase 100.0 4.3E-42 1.5E-46  345.6  15.2  279  131-489    17-307 (323)
161 1qcf_A Haematopoetic cell kina 100.0 4.1E-42 1.4E-46  363.2  15.8  256  130-480   181-437 (454)
162 2pml_X PFPK7, Ser/Thr protein  100.0 2.1E-41 7.3E-46  343.8  20.4  302  131-492    25-334 (348)
163 3gen_A Tyrosine-protein kinase 100.0 5.8E-42   2E-46  337.9  15.7  257  130-481    17-274 (283)
164 3kex_A Receptor tyrosine-prote 100.0 1.3E-41 4.4E-46  343.2  18.5  260  133-481     9-270 (325)
165 3kul_A Ephrin type-A receptor  100.0 8.2E-42 2.8E-46  345.0  16.4  258  132-481    44-307 (325)
166 3a99_A Proto-oncogene serine/t 100.0 9.2E-42 3.1E-46  343.7  16.3  261  133-490    39-303 (320)
167 2iwi_A Serine/threonine-protei 100.0 9.3E-42 3.2E-46  341.4  16.2  266  133-491    27-294 (312)
168 3lb7_A RAF proto-oncogene seri 100.0 4.7E-41 1.6E-45  336.8  21.3  268  130-485    29-298 (307)
169 2dyl_A Dual specificity mitoge 100.0 2.9E-41 9.8E-46  338.0  19.6  271  132-488    20-291 (318)
170 3aln_A Dual specificity mitoge 100.0 8.3E-42 2.9E-46  344.3  15.6  277  131-490    16-295 (327)
171 3poz_A Epidermal growth factor 100.0 7.5E-42 2.6E-46  345.3  15.0  259  134-481    12-272 (327)
172 3fhr_A MAP kinase-activated pr 100.0 1.5E-41 5.1E-46  344.7  17.1  265  135-487    26-294 (336)
173 3tt0_A Basic fibroblast growth 100.0 1.1E-40 3.9E-45  344.1  23.7  281  131-481    63-346 (382)
174 1q8y_A SR protein kinase; tran 100.0 5.8E-42   2E-46  351.0  13.6  286  134-489    16-342 (373)
175 3op5_A Serine/threonine-protei 100.0 2.4E-41 8.1E-46  346.7  18.0  275  134-480    32-322 (364)
176 1rjb_A FL cytokine receptor; k 100.0 1.3E-41 4.3E-46  345.2  15.7  283  129-485    37-332 (344)
177 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-41   4E-46  340.2  15.1  278  131-481    17-305 (314)
178 3kfa_A Tyrosine-protein kinase 100.0 1.1E-41 3.7E-46  336.6  14.6  259  130-481     6-265 (288)
179 3uim_A Brassinosteroid insensi 100.0 2.2E-42 7.6E-47  348.1   9.5  269  133-483    26-307 (326)
180 3cek_A Dual specificity protei 100.0 1.7E-41 5.7E-46  340.0  15.6  280  132-493    23-305 (313)
181 2eu9_A Dual specificity protei 100.0 2.5E-41 8.6E-46  343.1  16.9  278  134-490    16-343 (355)
182 3t9t_A Tyrosine-protein kinase 100.0 2.5E-41 8.5E-46  330.0  15.7  257  130-481     1-258 (267)
183 1mp8_A Focal adhesion kinase 1 100.0   2E-41 6.8E-46  334.2  15.0  258  131-481     9-270 (281)
184 1csn_A Casein kinase-1; phosph 100.0 7.4E-41 2.5E-45  332.0  19.1  259  133-481     6-277 (298)
185 4f0f_A Serine/threonine-protei 100.0 8.2E-41 2.8E-45  330.4  19.2  261  133-480    15-282 (287)
186 4e5w_A Tyrosine-protein kinase 100.0 2.3E-41   8E-46  336.5  14.6  271  133-480    17-295 (302)
187 3kmu_A ILK, integrin-linked ki 100.0 6.6E-41 2.3E-45  327.2  17.5  257  132-480     5-263 (271)
188 3dtc_A Mitogen-activated prote 100.0 2.7E-41 9.1E-46  330.8  14.7  254  133-481     3-267 (271)
189 1luf_A Muscle-specific tyrosin 100.0   2E-41 6.9E-46  343.0  14.2  277  132-481    42-329 (343)
190 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.4E-41 8.3E-46  357.1  15.0  262  130-486   177-441 (452)
191 1k9a_A Carboxyl-terminal SRC k 100.0 7.7E-41 2.6E-45  353.1  18.7  252  130-480   186-438 (450)
192 4fvq_A Tyrosine-protein kinase 100.0 1.2E-40 4.2E-45  329.2  18.8  258  133-481     4-269 (289)
193 1t46_A HOMO sapiens V-KIT hard 100.0 2.8E-41 9.7E-46  337.3  14.3  275  131-481    17-301 (313)
194 3g2f_A Bone morphogenetic prot 100.0   1E-40 3.6E-45  337.1  18.0  285  132-489     8-326 (336)
195 3lzb_A Epidermal growth factor 100.0 8.7E-41   3E-45  337.8  17.3  259  134-481    12-272 (327)
196 2izr_A Casein kinase I isoform 100.0 7.8E-41 2.7E-45  338.0  16.7  255  135-480     7-274 (330)
197 3cc6_A Protein tyrosine kinase 100.0   6E-41   2E-45  330.6  15.5  257  132-481     7-267 (281)
198 2qol_A Ephrin receptor; recept 100.0 2.3E-41 7.9E-46  348.5  13.0  257  132-480    40-302 (373)
199 3p23_A Serine/threonine-protei 100.0 5.9E-41   2E-45  352.1  16.1  262  132-486    19-289 (432)
200 1qpc_A LCK kinase; alpha beta  100.0 7.5E-41 2.6E-45  329.3  15.7  256  130-480     6-262 (279)
201 3q4u_A Activin receptor type-1 100.0 1.1E-40 3.9E-45  331.1  17.1  264  134-480     5-295 (301)
202 2a19_B Interferon-induced, dou 100.0 4.6E-41 1.6E-45  330.8  13.3  258  137-489    11-276 (284)
203 3lxl_A Tyrosine-protein kinase 100.0 2.8E-41 9.6E-46  340.6  12.0  270  134-481    20-297 (327)
204 2pvf_A Fibroblast growth facto 100.0 8.5E-41 2.9E-45  338.3  15.3  273  131-481    29-312 (334)
205 2i1m_A Macrophage colony-stimu 100.0 5.3E-41 1.8E-45  339.0  13.5  271  131-481    40-320 (333)
206 2v62_A Serine/threonine-protei 100.0 8.5E-41 2.9E-45  340.1  14.4  274  134-481    34-322 (345)
207 1p4o_A Insulin-like growth fac 100.0 1.2E-40 4.2E-45  334.5  15.2  269  130-481    18-293 (322)
208 2rio_A Serine/threonine-protei 100.0 9.6E-41 3.3E-45  350.7  14.4  272  136-487    14-302 (434)
209 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-40 4.2E-45  330.1  14.3  261  131-480    18-281 (289)
210 2h8h_A Proto-oncogene tyrosine 100.0   9E-41 3.1E-45  360.0  13.9  261  130-485   260-523 (535)
211 2h34_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43  323.4  23.9  258  134-480    31-289 (309)
212 4hgt_A Casein kinase I isoform 100.0 2.7E-40 9.3E-45  327.3  15.9  253  136-480     8-273 (296)
213 2qkw_B Protein kinase; three-h 100.0 4.4E-41 1.5E-45  338.3  10.0  265  134-483    36-311 (321)
214 3uzp_A CKI-delta, CKID, casein 100.0 8.7E-40   3E-44  323.9  19.0  252  136-480     8-273 (296)
215 2xir_A Vascular endothelial gr 100.0   1E-39 3.6E-44  326.4  19.7  274  131-481    21-304 (316)
216 3brb_A Proto-oncogene tyrosine 100.0 2.9E-40   1E-44  330.7  15.6  271  130-481    27-302 (313)
217 1xbb_A Tyrosine-protein kinase 100.0 2.5E-40 8.6E-45  328.0  14.8  256  132-480    11-272 (291)
218 2eva_A TAK1 kinase - TAB1 chim 100.0 4.7E-40 1.6E-44  329.3  16.8  249  134-481     5-257 (307)
219 4eut_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45  349.8   8.9  278  134-480     6-302 (396)
220 3pls_A Macrophage-stimulating  100.0 7.4E-40 2.5E-44  324.7  17.9  253  138-480    22-280 (298)
221 2yfx_A Tyrosine-protein kinase 100.0 1.4E-40 4.9E-45  335.5  12.7  272  131-488    24-305 (327)
222 3mdy_A Bone morphogenetic prot 100.0 1.2E-39   4E-44  329.0  19.4  264  135-481    35-325 (337)
223 1u59_A Tyrosine-protein kinase 100.0 2.5E-40 8.5E-45  327.3  14.1  258  132-482     4-267 (287)
224 1mqb_A Ephrin type-A receptor  100.0 7.4E-40 2.5E-44  331.7  17.4  258  132-481    39-303 (333)
225 2buj_A Serine/threonine-protei 100.0 2.6E-40 8.9E-45  331.5  13.3  268  133-481    25-300 (317)
226 2ozo_A Tyrosine-protein kinase 100.0   9E-40 3.1E-44  357.6  18.5  262  132-486   330-600 (613)
227 3f66_A Hepatocyte growth facto 100.0 7.6E-40 2.6E-44  325.2  15.9  254  137-480    25-284 (298)
228 3ll6_A Cyclin G-associated kin 100.0 1.6E-39 5.5E-44  327.4  18.5  268  132-483    23-304 (337)
229 2w1i_A JAK2; chromosomal rearr 100.0 4.7E-40 1.6E-44  331.7  14.4  270  133-480    37-315 (326)
230 3c1x_A Hepatocyte growth facto 100.0 6.2E-40 2.1E-44  337.9  15.6  255  137-481    89-349 (373)
231 4fl3_A Tyrosine-protein kinase 100.0 4.9E-40 1.7E-44  360.8  15.8  257  131-480   362-624 (635)
232 2jii_A Serine/threonine-protei 100.0 7.5E-40 2.6E-44  333.9  16.1  265  136-481    41-330 (352)
233 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.8E-40 1.3E-44  337.7  13.6  263  132-488    60-342 (365)
234 2nru_A Interleukin-1 receptor- 100.0 4.9E-40 1.7E-44  328.0  13.6  265  139-481    33-300 (307)
235 1fvr_A Tyrosine-protein kinase 100.0 8.1E-40 2.8E-44  329.9  15.1  270  133-481    21-294 (327)
236 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.3E-39 1.1E-43  323.5  19.4  267  130-481    26-296 (319)
237 2wqm_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44  326.0  15.4  262  135-481    30-291 (310)
238 1byg_A CSK, protein (C-termina 100.0 1.3E-39 4.6E-44  320.4  15.4  251  131-480    15-266 (278)
239 3lxp_A Non-receptor tyrosine-p 100.0 3.2E-40 1.1E-44  331.9  11.0  268  134-480    28-303 (318)
240 3dzo_A Rhoptry kinase domain;  100.0 6.4E-40 2.2E-44  342.3  12.4  296  134-495    75-378 (413)
241 3m2w_A MAP kinase-activated pr 100.0 1.9E-38 6.5E-43  316.1  20.1  244  137-488    17-264 (299)
242 1u46_A ACK-1, activated CDC42  100.0 8.3E-39 2.8E-43  316.1  17.2  258  134-481    15-278 (291)
243 1b6c_B TGF-B superfamily recep 100.0 2.3E-39   8E-44  327.7  12.4  263  136-481    41-330 (342)
244 3qa8_A MGC80376 protein; kinas 100.0 4.4E-40 1.5E-44  359.1   6.5  277  137-486    14-303 (676)
245 3sv0_A Casein kinase I-like; t 100.0 1.6E-38 5.4E-43  337.8  17.9  256  136-480     6-271 (483)
246 2j0j_A Focal adhesion kinase 1 100.0 9.8E-39 3.3E-43  351.8  16.3  258  131-481   384-645 (656)
247 3gxj_A TGF-beta receptor type- 100.0 1.8E-41   6E-46  337.0  -6.6  258  137-480     3-290 (303)
248 2vuw_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43  326.9   8.0  265  134-485    17-336 (336)
249 2pzi_A Probable serine/threoni 100.0 1.9E-37 6.4E-42  343.5  10.5  249  134-486    77-326 (681)
250 3uqc_A Probable conserved tran 100.0 2.5E-35 8.6E-40  292.4  13.1  230  134-481    28-259 (286)
251 4azs_A Methyltransferase WBDD; 100.0 3.9E-31 1.3E-35  286.5  -0.8  194  143-409   240-434 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 2.3E-25 7.9E-30  239.8   3.3  192  141-412   340-537 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 2.7E-23 9.4E-28  205.5   6.8  164  137-365    90-253 (282)
254 1zth_A RIO1 serine protein kin  99.8   2E-19 6.7E-24  175.3  12.5  161  139-340    49-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 1.4E-17 4.9E-22  170.2   9.3  159  139-340    97-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.0   9E-10 3.1E-14  106.4  11.2  140  138-339    15-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp  98.9 7.9E-10 2.7E-14  106.0   6.1   29  311-339   186-214 (264)
258 3dxp_A Putative acyl-COA dehyd  98.9 7.1E-09 2.4E-13  105.0  10.5   92  221-339    97-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.4 1.3E-07 4.4E-12   93.5   4.6   31  310-340   192-224 (304)
260 3r70_A Aminoglycoside phosphot  98.2 1.7E-06 5.8E-11   86.1   6.8   30  311-340   209-238 (320)
261 4gkh_A Aminoglycoside 3'-phosp  97.9 1.2E-05   4E-10   77.5   6.3   29  311-339   195-223 (272)
262 3tdw_A Gentamicin resistance p  97.7 0.00021 7.1E-09   70.5  12.5   30  310-339   191-224 (306)
263 2olc_A MTR kinase, methylthior  97.6  0.0003   1E-08   71.8  11.5   30  309-339   227-256 (397)
264 3ats_A Putative uncharacterize  97.4 0.00054 1.9E-08   68.6  10.7   31  309-339   222-252 (357)
265 3ovc_A Hygromycin-B 4-O-kinase  97.4 0.00047 1.6E-08   69.7  10.2   31  310-340   214-244 (362)
266 3d1u_A Putative fructosamine-3  97.3  0.0038 1.3E-07   60.9  14.3   27  310-338   189-215 (288)
267 2q83_A YTAA protein; 2635576,   97.3   0.003   1E-07   62.3  13.7   43  297-339   197-252 (346)
268 2pyw_A Uncharacterized protein  96.9   0.005 1.7E-07   63.2  11.3   32  308-340   231-262 (420)
269 3dxq_A Choline/ethanolamine ki  96.4  0.0022 7.5E-08   62.7   4.6   29  310-339   174-202 (301)
270 2yle_A Protein spire homolog 1  96.2   0.068 2.3E-06   49.6  13.2   98  255-408    33-131 (229)
271 2ppq_A HSK, HK, homoserine kin  95.7   0.055 1.9E-06   52.8  11.1   41  299-339   170-217 (322)
272 3f7w_A Putative fructosamine-3  95.7    0.13 4.4E-06   49.5  13.6   34  137-171    15-48  (288)
273 2qg7_A Ethanolamine kinase PV0  94.8   0.041 1.4E-06   57.2   6.8   15  310-324   291-305 (458)
274 3jr1_A Putative fructosamine-3  93.6    0.56 1.9E-05   45.9  12.1   25  310-335   208-232 (312)
275 3g15_A CK, chetk-alpha, cholin  90.4   0.099 3.4E-06   53.2   2.2   29  311-339   246-280 (401)
276 3csv_A Aminoglycoside phosphot  88.8    0.15   5E-06   50.2   1.9   32  309-340   183-218 (333)
277 1zyl_A Hypothetical protein YI  88.4    0.25 8.6E-06   48.2   3.4   28  310-339   196-223 (328)
278 3i1a_A Spectinomycin phosphotr  85.7    0.37 1.2E-05   47.7   2.7   30  310-339   207-236 (339)
279 3c5i_A Choline kinase; choline  85.4    0.64 2.2E-05   46.3   4.4   29  310-339   213-241 (369)
280 1nw1_A Choline kinase (49.2 KD  78.3    0.61 2.1E-05   47.8   1.2   30  310-339   250-307 (429)
281 3feg_A Choline/ethanolamine ki  75.7     1.1 3.6E-05   45.3   2.0   30  310-339   221-254 (379)
282 3f2s_A CK, chetk-alpha, cholin  73.7     1.2 4.2E-05   45.1   2.0   30  310-339   245-280 (401)
283 3cxl_A N-chimerin; SH2, RHO-GA  69.6    0.57 1.9E-05   48.6  -1.7   25  140-167   145-169 (463)
284 2x6h_A GH13170P, VPS34, phosph  65.8      18 0.00063   39.1   9.1   84  248-338   490-575 (696)
285 4ano_A ESSB; membrane protein,  63.4     7.8 0.00027   35.7   4.9   50  287-338    82-132 (219)
286 3mes_A Choline kinase; malaria  62.5     2.7 9.1E-05   43.0   1.7   29  310-339   263-291 (424)
287 3ls8_A Phosphatidylinositol 3-  45.2   2E+02  0.0067   30.6  12.6   84  248-338   416-501 (614)
288 4ann_A ESSB; membrane protein,  40.3      10 0.00035   34.7   1.6   51  286-338    77-127 (215)
289 3bpy_A FORK head domain, forkh  31.4      32  0.0011   26.5   2.9   44  455-501    11-65  (85)
290 3coa_C Forkhead box protein O1  30.3      35  0.0012   28.0   3.1   45  454-501    16-71  (117)
291 3feg_A Choline/ethanolamine ki  26.4      24 0.00081   35.2   1.7   18  294-311   146-163 (379)
292 3l2c_A Forkhead box protein O4  25.5      53  0.0018   26.6   3.3   45  454-501    29-84  (110)
293 2ks1_B Epidermal growth factor  25.2      29   0.001   23.2   1.4   12   95-106    28-39  (44)
294 3mes_A Choline kinase; malaria  25.0      56  0.0019   33.0   4.2   18  294-311   166-183 (424)
295 1zyl_A Hypothetical protein YI  23.4 3.2E+02   0.011   25.4   9.4   16  242-257    99-114 (328)
296 3c5i_A Choline kinase; choline  23.3      48  0.0016   32.3   3.3   17  142-158    38-54  (369)
297 2l2t_A Receptor tyrosine-prote  23.2      34  0.0012   22.8   1.4   11   96-106    28-38  (44)
298 1nw1_A Choline kinase (49.2 KD  22.0      35  0.0012   34.5   2.0   18  142-159    78-95  (429)

No 1  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=4.8e-57  Score=458.11  Aligned_cols=262  Identities=22%  Similarity=0.299  Sum_probs=210.1

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      ++.|++.++||+|+||+||+|++..+|+.||||++.......    .+.+.+|.                        ..
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~----~~~~~~Ei------------------------~i  124 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR----RELLFNEV------------------------VI  124 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS----GGGGHHHH------------------------HH
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH----HHHHHHHH------------------------HH
Confidence            457999999999999999999999999999999987642210    11111222                        23


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|||||+++++|..+        +..|||||||++|+|.+++.+.                     .+++..++.|
T Consensus       125 l~~l~HpnIV~l~~~~~~~--------~~~~ivmEy~~gg~L~~~l~~~---------------------~l~e~~~~~~  175 (346)
T 4fih_A          125 MRDYQHENVVEMYNSYLVG--------DELWVVMEFLEGGALTDIVTHT---------------------RMNEEQIAAV  175 (346)
T ss_dssp             HHHCCCTTBCCEEEEEEET--------TEEEEEECCCTTEEHHHHHHHS---------------------CCCHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEEC--------CEEEEEEeCCCCCcHHHHHHcC---------------------CCCHHHHHHH
Confidence            5566799999999999764        4699999999999999999764                     4789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.||+.||+|||+++||||||||+||||+.+|.+||+|||+|+.+..... .....+||+.|||||++.+.         
T Consensus       176 ~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~~~GTp~YmAPEvl~~~---------  245 (346)
T 4fih_A          176 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPELISRL---------  245 (346)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTC---------
T ss_pred             HHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cccccccCcCcCCHHHHCCC---------
Confidence            99999999999999999999999999999999999999999998754432 34567899999999999753         


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                   .|+.++|||||||++|||++|..|+......-.  +...         .....+.+..+..+|++++
T Consensus       246 -------------~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--~~~i---------~~~~~~~~~~~~~~s~~~~  301 (346)
T 4fih_A          246 -------------PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMI---------RDNLPPRLKNLHKVSPSLK  301 (346)
T ss_dssp             -------------CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHH---------HHSSCCCCSCGGGSCHHHH
T ss_pred             -------------CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHHH---------HcCCCCCCCccccCCHHHH
Confidence                         455778999999999999999999865432111  1100         0011233445566899999


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      +||.+||+   .||++|||++|+|+||||+.....+
T Consensus       302 dli~~~L~---~dP~~R~ta~e~l~Hp~~~~~~~p~  334 (346)
T 4fih_A          302 GFLDRLLV---RDPAQRATAAELLKHPFLAKAGPPA  334 (346)
T ss_dssp             HHHHHHSC---SSTTTSCCHHHHTTCGGGGGCCCGG
T ss_pred             HHHHHHcC---CChhHCcCHHHHhcCHhhcCCCCCc
Confidence            99999999   6679999999999999999876644


No 2  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=9.2e-56  Score=459.47  Aligned_cols=263  Identities=22%  Similarity=0.301  Sum_probs=211.2

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      +++.|++.++||+|+||+||+|+++.+|+.||||++.......    .+.+.+|+                        .
T Consensus       149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~----~~~~~~Ei------------------------~  200 (423)
T 4fie_A          149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR----RELLFNEV------------------------V  200 (423)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS----GGGHHHHH------------------------H
T ss_pred             hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH----HHHHHHHH------------------------H
Confidence            4567999999999999999999999999999999987632210    01111222                        2


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.|||||+++++|...        +..|||||||++|+|.+++...                     .+++..++.
T Consensus       201 il~~l~HpnIV~l~~~~~~~--------~~~~iVmEy~~gG~L~~~i~~~---------------------~l~e~~~~~  251 (423)
T 4fie_A          201 IMRDYQHENVVEMYNSYLVG--------DELWVVMEFLEGGALTDIVTHT---------------------RMNEEQIAA  251 (423)
T ss_dssp             HHHHCCCTTBCCEEEEEEET--------TEEEEEEECCTTEEHHHHHHHS---------------------CCCHHHHHH
T ss_pred             HHHhCCCCCCCceEEEEEEC--------CEEEEEEeCCCCCcHHHHHhcc---------------------CCCHHHHHH
Confidence            35566799999999999763        4699999999999999999764                     478999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      |+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+..... .....+||+.|||||++.+.        
T Consensus       252 ~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~~~GTp~YmAPEvl~~~--------  322 (423)
T 4fie_A          252 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPELISRL--------  322 (423)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CBCCCEECTTTCCHHHHTTC--------
T ss_pred             HHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-cccccccCcCcCCHHHHCCC--------
Confidence            999999999999999999999999999999999999999999998754432 34567899999999999753        


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                    .|+.++|||||||++|||++|..|+.............           ....+.+..+..+|+++
T Consensus       323 --------------~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~-----------~~~~~~~~~~~~~s~~~  377 (423)
T 4fie_A          323 --------------PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-----------DNLPPRLKNLHKVSPSL  377 (423)
T ss_dssp             --------------CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-----------HSCCCCCSCTTSSCHHH
T ss_pred             --------------CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH-----------cCCCCCCcccccCCHHH
Confidence                          45567899999999999999999986543221111100           11123344556789999


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      ++||.+||+   .||++|||++|+|+||||+.....+
T Consensus       378 ~dli~~~L~---~dP~~R~ta~ell~Hp~~~~~~~p~  411 (423)
T 4fie_A          378 KGFLDRLLV---RDPAQRATAAELLKHPFLAKAGPPA  411 (423)
T ss_dssp             HHHHHHHSC---SSTTTSCCHHHHTTCGGGGGCCCGG
T ss_pred             HHHHHHHcC---CChhHCcCHHHHhcCHHhcCCCCCc
Confidence            999999999   6669999999999999999876654


No 3  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=6.8e-56  Score=440.46  Aligned_cols=258  Identities=22%  Similarity=0.267  Sum_probs=198.6

Q ss_pred             EEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHhhh
Q 039267          139 FVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRLSR  218 (502)
Q Consensus       139 ~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l~~  218 (502)
                      |++.++||+|+||+||+|++..+++.||+|.+.......                         .....+. .+...++.
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-------------------------~~~~~~~-~E~~il~~   81 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-------------------------SERQRFK-EEAEMLKG   81 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-------------------------HHHHHHH-HHHHHHHT
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-------------------------HHHHHHH-HHHHHHHh
Confidence            478889999999999999999999999999887532210                         0001111 12234666


Q ss_pred             cCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHH
Q 039267          219 AAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQ  298 (502)
Q Consensus       219 ~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  298 (502)
                      +.|||||+++++|......    ++..+||||||++|+|.+++.+.+                    .+++..++.++.|
T Consensus        82 l~HpnIV~~~~~~~~~~~~----~~~~~lvmEy~~gg~L~~~l~~~~--------------------~l~~~~~~~~~~q  137 (290)
T 3fpq_A           82 LQHPNIVRFYDSWESTVKG----KKCIVLVTELMTSGTLKTYLKRFK--------------------VMKIKVLRSWCRQ  137 (290)
T ss_dssp             CCCTTBCCEEEEEEEEETT----EEEEEEEEECCCSCBHHHHHHHHS--------------------SCCHHHHHHHHHH
T ss_pred             CCCCCCCcEEEEEeeccCC----CcEEEEEEeCCCCCCHHHHHHhcC--------------------CCCHHHHHHHHHH
Confidence            7799999999998653211    235899999999999999998764                    6889999999999


Q ss_pred             HHHHHHHHHHcC--CeeccCCCCcEEEcc-CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          299 IITSLKKIHDTG--IVHRDVKPANLVLTK-RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       299 ia~gL~yLH~~~--IiHrDlKp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      |+.||+|||+++  ||||||||+||||+. ++.+||+|||+|+.....   .....+||+.|||||++.+          
T Consensus       138 i~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~---~~~~~~GTp~YmAPE~~~~----------  204 (290)
T 3fpq_A          138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYEE----------  204 (290)
T ss_dssp             HHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGGT----------
T ss_pred             HHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC---ccCCcccCccccCHHHcCC----------
Confidence            999999999998  999999999999984 799999999999864322   2345689999999998853          


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                   .|+.++|||||||+||||+||..|+......... ....          .............+++++
T Consensus       205 -------------~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~-~~~i----------~~~~~~~~~~~~~~~~~~  260 (290)
T 3fpq_A          205 -------------KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI-YRRV----------TSGVKPASFDKVAIPEVK  260 (290)
T ss_dssp             -------------CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH-HHHH----------TTTCCCGGGGGCCCHHHH
T ss_pred             -------------CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHH-HHHH----------HcCCCCCCCCccCCHHHH
Confidence                         3567889999999999999999998654332221 1111          011111223345688999


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      +||.+||+   .||++|||++|+|+||||++
T Consensus       261 ~li~~~L~---~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          261 EIIEGCIR---QNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHSC---SSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHcc---CChhHCcCHHHHhcCccccC
Confidence            99999999   66699999999999999985


No 4  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.1e-56  Score=456.21  Aligned_cols=263  Identities=22%  Similarity=0.210  Sum_probs=200.3

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.++||+|+||+||+|++..+|+.||||++.+.....  ...+                       .+. .+..
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~--~~~~-----------------------~~~-~E~~   75 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS--KERE-----------------------ESR-REVA   75 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH--HHHH-----------------------HHH-HHHH
T ss_pred             cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH--HHHH-----------------------HHH-HHHH
Confidence            3578999999999999999999999999999999987643210  0001                       111 1223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.|||||+++++|..        ++..|||||||++|+|.++|...+                  ...+++..++.
T Consensus        76 il~~l~HpnIV~~~~~~~~--------~~~~yiVmEy~~gg~L~~~i~~~~------------------~~~~~e~~~~~  129 (350)
T 4b9d_A           76 VLANMKHPNIVQYRESFEE--------NGSLYIVMDYCEGGDLFKRINAQK------------------GVLFQEDQILD  129 (350)
T ss_dssp             HHHHCCCTTBCCEEEEEEE--------TTEEEEEEECCTTCBHHHHHHHTT------------------TCCCCHHHHHH
T ss_pred             HHHHCCCCCCCcEEEEEEE--------CCEEEEEEeCCCCCcHHHHHHHcC------------------CCCCCHHHHHH
Confidence            3566779999999999876        346999999999999999998653                  12468899999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      |+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+..... .....+||+.|||||++.+.        
T Consensus       130 ~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~~~GT~~YmAPE~l~~~--------  200 (350)
T 4b9d_A          130 WFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE-LARACIGTPYYLSPEICENK--------  200 (350)
T ss_dssp             HHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH-HHHHHHSCCTTCCHHHHTTC--------
T ss_pred             HHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc-cccccCCCccccCHHHHCCC--------
Confidence            999999999999999999999999999999999999999999997653321 22356799999999999763        


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                    .|+.++|||||||+||||++|..|+........ ..+....            ...+.+..+|+++
T Consensus       201 --------------~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~~------------~~~~~~~~~s~~~  253 (350)
T 4b9d_A          201 --------------PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL-VLKIISG------------SFPPVSLHYSYDL  253 (350)
T ss_dssp             --------------CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHT------------CCCCCCTTSCHHH
T ss_pred             --------------CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcC------------CCCCCCccCCHHH
Confidence                          355678999999999999999999865432111 1111000            0112345679999


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      ++||.+||+   .||++|||++|+|+||||+...
T Consensus       254 ~~li~~~L~---~dP~~R~s~~e~l~hp~~~~~~  284 (350)
T 4b9d_A          254 RSLVSQLFK---RNPRDRPSVNSILEKGFIAKRI  284 (350)
T ss_dssp             HHHHHHHTC---SSGGGSCCHHHHHTSHHHHTTG
T ss_pred             HHHHHHHcc---CChhHCcCHHHHhcCHHhhcCC
Confidence            999999999   6669999999999999998643


No 5  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=3.1e-56  Score=445.80  Aligned_cols=260  Identities=21%  Similarity=0.292  Sum_probs=207.2

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++++.||+|+||+||+|++..+|+.||||++.+....          ++              .....+.+ +..
T Consensus        30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~----------~~--------------~~~~~~~~-E~~   84 (311)
T 4aw0_A           30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII----------KE--------------NKVPYVTR-ERD   84 (311)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH----------HT--------------TCHHHHHH-HHH
T ss_pred             CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC----------CH--------------HHHHHHHH-HHH
Confidence            346899999999999999999999999999999999763210          00              00011111 122


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||++++++|..        ++..||||||+++|+|.+++.+.+                    .+++..++.
T Consensus        85 il~~l~HpnIv~l~~~~~~--------~~~~yivmEy~~gG~L~~~i~~~~--------------------~l~e~~~~~  136 (311)
T 4aw0_A           85 VMSRLDHPFFVKLYFTFQD--------DEKLYFGLSYAKNGELLKYIRKIG--------------------SFDETCTRF  136 (311)
T ss_dssp             HHTTCCCTTBCCEEEEEEC--------SSEEEEEECCCTTEEHHHHHHHHS--------------------SCCHHHHHH
T ss_pred             HHHhCCCCCCCeEEEEEEe--------CCEEEEEEecCCCCCHHHHHHHcC--------------------CCCHHHHHH
Confidence            3566779999999999876        346999999999999999998764                    689999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCC-ccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGK-NYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      ++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.+.... .......+||+.|||||++.+.       
T Consensus       137 ~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~-------  209 (311)
T 4aw0_A          137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK-------  209 (311)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHS-------
T ss_pred             HHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCC-------
Confidence            99999999999999999999999999999999999999999999875443 2344567899999999999753       


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                     .|+.++||||+||+||||++|..|+........ ..+..               .....++.+++
T Consensus       210 ---------------~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~---------------~~~~~p~~~s~  259 (311)
T 4aw0_A          210 ---------------SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK---------------LEYDFPEKFFP  259 (311)
T ss_dssp             ---------------CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---------------TCCCCCTTCCH
T ss_pred             ---------------CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---------------CCCCCCcccCH
Confidence                           355678999999999999999999865432211 11111               12234556899


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHH------HhcCCccccC
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAA------ALRHPYFLLG  487 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~e------vl~HP~f~~~  487 (502)
                      ++++||.+||+   .||++|||++|      +++||||+.-
T Consensus       260 ~~~dli~~lL~---~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          260 KARDLVEKLLV---LDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             HHHHHHHHHSC---SSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHcc---CCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence            99999999999   66699999987      6899999853


No 6  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.9e-55  Score=433.79  Aligned_cols=257  Identities=22%  Similarity=0.276  Sum_probs=190.4

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++.+......           .             ....+. .+...+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-----------~-------------~~~~~~-~Ei~il   67 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS-----------D-------------MQGRIE-REISYL   67 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------------------------------CHHHHH-HHHHHH
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCH-----------H-------------HHHHHH-HHHHHH
Confidence            579999999999999999999999999999999976322100           0             000111 122335


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      +.+.||||+++++++..        ++..+|||||+ +|+|.+++.+++                    .+++..++.++
T Consensus        68 ~~l~HpnIv~~~~~~~~--------~~~~~ivmEy~-~g~L~~~l~~~~--------------------~l~e~~~~~~~  118 (275)
T 3hyh_A           68 RLLRHPHIIKLYDVIKS--------KDEIIMVIEYA-GNELFDYIVQRD--------------------KMSEQEARRFF  118 (275)
T ss_dssp             HHCCCTTBCCEEEEEEC--------SSEEEEEEECC-CEEHHHHHHHSC--------------------SCCHHHHHHHH
T ss_pred             HHCCCCCCCeEEEEEEE--------CCEEEEEEeCC-CCCHHHHHHHcC--------------------CCCHHHHHHHH
Confidence            66789999999999875        34699999999 789999998764                    68999999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .||+.||+|||+++|+||||||+|||++.++++||+|||+|+......  .....+||+.|||||++.+..+        
T Consensus       119 ~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--~~~~~~GT~~Y~APE~~~~~~y--------  188 (275)
T 3hyh_A          119 QQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKLY--------  188 (275)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----------------CTTSCHHHHSSSSC--------
T ss_pred             HHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC--ccCCeeECcccCChhhhcCCCC--------
Confidence            999999999999999999999999999999999999999998765433  2345789999999999976432        


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHHH
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGWD  456 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  456 (502)
                                   ++.++||||+||++|||++|..|+......  .....          ...  .....+...|+++++
T Consensus       189 -------------~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~~----------i~~--~~~~~p~~~s~~~~~  241 (275)
T 3hyh_A          189 -------------AGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKN----------ISN--GVYTLPKFLSPGAAG  241 (275)
T ss_dssp             -------------CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH----------HHH--TCCCCCTTSCHHHHH
T ss_pred             -------------CCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHH----------HHc--CCCCCCCCCCHHHHH
Confidence                         235789999999999999999998654321  11111          111  122344567999999


Q ss_pred             HHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          457 LATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       457 Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      |+.+||+   .||++|||++|+++||||+..
T Consensus       242 li~~~L~---~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          242 LIKRMLI---VNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             HHHHHSC---SSGGGSCCHHHHHHCHHHHTT
T ss_pred             HHHHHcc---CChhHCcCHHHHHcCcccccC
Confidence            9999999   777999999999999999854


No 7  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=5.4e-55  Score=436.34  Aligned_cols=260  Identities=21%  Similarity=0.261  Sum_probs=201.6

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEe---cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIV---PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~---~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      ...++|++.+.||+|+||+||+|+..   .+++.||+|++++....  ......+..|..+++                 
T Consensus        21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~-----------------   81 (304)
T 3ubd_A           21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILV-----------------   81 (304)
T ss_dssp             CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE--EEECC------CCCC-----------------
T ss_pred             CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC--hHHHHHHHHHHHHHH-----------------
Confidence            44578999999999999999999874   36789999999864321  111112233444444                 


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                             .+.||||++++++|..+        +..+|||||++||||.+++.+.+                    .+++.
T Consensus        82 -------~l~HpnIv~l~~~~~~~--------~~~~ivmEy~~gg~L~~~l~~~~--------------------~l~e~  126 (304)
T 3ubd_A           82 -------EVNHPFIVKLHYAFQTE--------GKLYLILDFLRGGDLFTRLSKEV--------------------MFTEE  126 (304)
T ss_dssp             -------CCCCTTEECEEEEEEET--------TEEEEEECCCTTCEEHHHHHHHC--------------------CCCHH
T ss_pred             -------HCCCCCCCeEEEEEEEC--------CEEEEEEEcCCCCCHHHHHHhcC--------------------CCCHH
Confidence                   44599999999998763        46999999999999999998764                    68999


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.++.||+.||+|||+++|+||||||+|||++.+|.+||+|||+|+....... .....+||+.|||||++.+..   
T Consensus       127 ~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~~~GT~~YmAPE~~~~~~---  202 (304)
T 3ubd_A          127 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRG---  202 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C-CCCSCCCCGGGCCHHHHHTSC---
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc-cccccccCcccCCHHHhccCC---
Confidence            9999999999999999999999999999999999999999999999987544332 345678999999999997643   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                         |+.++|||||||+||||++|..|+........  +..          +.  ......+..+
T Consensus       203 -------------------y~~~~DiwSlGvilyemltG~~PF~~~~~~~~--~~~----------i~--~~~~~~p~~~  249 (304)
T 3ubd_A          203 -------------------HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTM----------IL--KAKLGMPQFL  249 (304)
T ss_dssp             -------------------CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH----------HH--HCCCCCCTTS
T ss_pred             -------------------CCCCCcccchHHHHHHHHhCCCCCCCcCHHHH--HHH----------HH--cCCCCCCCcC
Confidence                               55678999999999999999999865432211  110          00  1122345568


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcC-----HHHHhcCCccccC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLS-----AAAALRHPYFLLG  487 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps-----~~evl~HP~f~~~  487 (502)
                      |+++++||.+||+   .||++|||     ++|+++||||+..
T Consensus       250 s~~~~~li~~~L~---~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          250 SPEAQSLLRMLFK---RNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             CHHHHHHHHHHTC---SSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcc---cCHHHCCCCCcCCHHHHHcCccccCC
Confidence            9999999999999   66699998     5899999999854


No 8  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.9e-54  Score=433.27  Aligned_cols=267  Identities=19%  Similarity=0.199  Sum_probs=197.2

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|+++.+++.++++||+|+||+||+|++.   ..||||+++....                         ..+....+.
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~-------------------------~~~~~~~f~   80 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDP-------------------------TPEQFQAFR   80 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSC-------------------------CHHHHHHHH
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCC-------------------------CHHHHHHHH
Confidence            468999999999999999999999999863   2478887764321                         111111122


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      + +...+++++|||||+++|++..         +..+||||||++|||.++|...+                   ..+++
T Consensus        81 ~-E~~il~~l~HpNIV~l~g~~~~---------~~~~iVmEy~~gGsL~~~l~~~~-------------------~~l~~  131 (307)
T 3omv_A           81 N-EVAVLRKTRHVNILLFMGYMTK---------DNLAIVTQWCEGSSLYKHLHVQE-------------------TKFQM  131 (307)
T ss_dssp             H-HHHHHTTCCCTTBCCEEEEECS---------SSCEEEEECCSSCBHHHHHHTSC-------------------CCCCH
T ss_pred             H-HHHHHHhCCCCCEeeEEEEEEC---------CeEEEEEEcCCCCCHHHHHhhcC-------------------CCCCH
Confidence            1 2234667789999999998743         35899999999999999998653                   25899


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc-cCCCcccCCCCcCCcccccCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN-YVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      ..+..|+.|||.||+|||+++||||||||+||||+.++++||+|||+|+....... ......+||+.|||||++.+...
T Consensus       132 ~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~  211 (307)
T 3omv_A          132 FQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN  211 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCC
Confidence            99999999999999999999999999999999999999999999999987654322 23456789999999999975321


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHH-HHhhccChHHHHHhhhccCccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNME-IKTAQYDLNKWREYTRLRSDFTIL  447 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                                         ..|+.++|||||||+||||+||..|+.......... ....+...         ......+
T Consensus       212 -------------------~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~---------p~~~~~~  263 (307)
T 3omv_A          212 -------------------NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS---------PDLSKLY  263 (307)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCC---------CCSTTSC
T ss_pred             -------------------CCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCC---------CCccccc
Confidence                               236678999999999999999999976433221111 11111110         0112345


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCcCHHHHh------cCCcc
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRLSAAAAL------RHPYF  484 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl------~HP~f  484 (502)
                      ..+++++++|+.+||+   .||++|||++||+      +||+-
T Consensus       264 ~~~~~~l~~li~~cl~---~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          264 KNCPKAMKRLVADCVK---KVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             TTSCHHHHHHHHHHTC---SSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             ccchHHHHHHHHHHcC---CCHhHCcCHHHHHHHHHHHhccCC
Confidence            5689999999999999   6669999999864      66653


No 9  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=6.1e-54  Score=433.97  Aligned_cols=257  Identities=17%  Similarity=0.098  Sum_probs=202.5

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..+.|.+.++||+|+||+||+|+++.+|+.||||+++....         ..+|..                        
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~------------------------  102 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELV------------------------  102 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHH------------------------
T ss_pred             chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHH------------------------
Confidence            45679999999999999999999999999999999875321         112222                        


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.|||||+++++|..+        +..+||||||++|+|.++|+..+                    .+++..++.
T Consensus       103 il~~l~HpnIV~l~~~~~~~--------~~~~ivmEy~~gg~L~~~l~~~~--------------------~l~e~~~~~  154 (336)
T 4g3f_A          103 ACAGLSSPRIVPLYGAVREG--------PWVNIFMELLEGGSLGQLIKQMG--------------------CLPEDRALY  154 (336)
T ss_dssp             TTTTCCCTTBCCEEEEEEET--------TEEEEEECCCTTCBHHHHHHHHS--------------------SCCHHHHHH
T ss_pred             HHHhCCCCCCCcEEEEEEEC--------CEEEEEEeccCCCcHHHHHHHcC--------------------CCCHHHHHH
Confidence            24556699999999998763        46999999999999999998764                    689999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeeccccccccCCCcc----CCCcccCCCCcCCcccccCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG-QIKLIDFGAATDLRIGKNY----VPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~-~~kL~DFGla~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      |+.||+.||+|||+++||||||||+||||+.+| .+||+|||+|+.+..+...    .....+||+.|||||++.+..  
T Consensus       155 ~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--  232 (336)
T 4g3f_A          155 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP--  232 (336)
T ss_dssp             HHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCC--
T ss_pred             HHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCC--
Confidence            999999999999999999999999999999998 6999999999987543221    233467999999999998643  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh-hHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN-FNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          |+.++|||||||+||||++|..|+...... ....+....            .+....++
T Consensus       233 --------------------y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~------------~~~~~~~~  280 (336)
T 4g3f_A          233 --------------------CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP------------PPIREIPP  280 (336)
T ss_dssp             --------------------CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC------------CGGGGSCT
T ss_pred             --------------------CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC------------CCchhcCc
Confidence                                556789999999999999999997643321 111111111            11123456


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHH-------------hcCCccccCCC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAA-------------LRHPYFLLGGD  489 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~ev-------------l~HP~f~~~~~  489 (502)
                      .+++++.+||.+||+   .||.+|||++|+             ++|||+..-.+
T Consensus       281 ~~s~~~~~li~~~L~---~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~  331 (336)
T 4g3f_A          281 SCAPLTAQAIQEGLR---KEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE  331 (336)
T ss_dssp             TSCHHHHHHHHHHTC---SSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred             cCCHHHHHHHHHHcc---CCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence            789999999999999   666999999997             57999986544


No 10 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=1.9e-53  Score=425.50  Aligned_cols=268  Identities=18%  Similarity=0.250  Sum_probs=188.2

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||+||+|+++.+|+.||||+++....   ....+.+.+                        +...+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~------------------------E~~il   57 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMR------------------------EVKAL   57 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS---HHHHHHHHH------------------------HHHHH
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC---HHHHHHHHH------------------------HHHHH
Confidence            469999999999999999999999999999998875321   000011111                        12335


Q ss_pred             hhcCCccccccccccccccCCc----cccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNS----QFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~----~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ..+.||||++++++|.......    ...+...||||||+++|+|.+++.....                 ....++..+
T Consensus        58 ~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~-----------------~~~~~~~~~  120 (299)
T 4g31_A           58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT-----------------IEERERSVC  120 (299)
T ss_dssp             TTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCS-----------------GGGSCHHHH
T ss_pred             HhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCC-----------------CChhHHHHH
Confidence            6677999999999987654211    1123347999999999999999987641                 123567778


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-----------CCCcccCCCCcCCcc
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-----------VPNRTLLDPDYCPPE  361 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-----------~~~~~~gt~~y~aPE  361 (502)
                      +.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.+......           ..+..+||+.|||||
T Consensus       121 ~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE  200 (299)
T 4g31_A          121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE  200 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHH
T ss_pred             HHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHH
Confidence            999999999999999999999999999999999999999999999987543221           123457999999999


Q ss_pred             cccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhcc
Q 039267          362 LYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLR  441 (502)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (502)
                      ++.+.                      .|+.++|||||||+||||++   |+....+.............+         
T Consensus       201 ~~~~~----------------------~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p---------  246 (299)
T 4g31_A          201 QIHGN----------------------SYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFP---------  246 (299)
T ss_dssp             HHTTC----------------------CCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCC---------
T ss_pred             HHcCC----------------------CCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCC---------
Confidence            99764                      35567899999999999997   443333222222211111111         


Q ss_pred             CccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          442 SDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       442 ~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                         +.+...++...+|+.+||+   .||++|||++|+++||||+...
T Consensus       247 ---~~~~~~~~~~~~li~~~L~---~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          247 ---PLFTQKYPCEYVMVQDMLS---PSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             ---HHHHHHCHHHHHHHHHHTC---SSGGGSCCHHHHHTSGGGCCC-
T ss_pred             ---CCCcccCHHHHHHHHHHcC---CChhHCcCHHHHhcCHhhCCCC
Confidence               1112235677899999999   7779999999999999998654


No 11 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=2.8e-53  Score=425.77  Aligned_cols=274  Identities=16%  Similarity=0.188  Sum_probs=201.9

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEe-----cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIV-----PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF  205 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~  205 (502)
                      .+++..+++++.++||+|+||+||+|++.     .+++.||||+++....                         .. ..
T Consensus        20 ~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-------------------------~~-~~   73 (308)
T 4gt4_A           20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-------------------------GP-LR   73 (308)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC-------------------------C--CH
T ss_pred             cccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC-------------------------hH-HH
Confidence            35678889999999999999999999974     2456677777653211                         00 00


Q ss_pred             hhhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcc
Q 039267          206 GDYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDST  285 (502)
Q Consensus       206 ~~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~  285 (502)
                      ..+ ..+...+.+++|||||+++|+|..+        +..+||||||++|||.++|.......+.....    .......
T Consensus        74 ~~f-~~E~~il~~l~HpNIV~l~g~~~~~--------~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~----~~~~~~~  140 (308)
T 4gt4_A           74 EEF-RHEAMLRARLQHPNVVCLLGVVTKD--------QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD----DDRTVKS  140 (308)
T ss_dssp             HHH-HHHHHHHHHCCCTTBCCEEEEECSS--------SSCEEEEECCSSCBHHHHHHTTCSSCCCC---------CCEEC
T ss_pred             HHH-HHHHHHHHhCCCCCCCCcceEEEEC--------CEEEEEEEcCCCCcHHHHHHhhCccccccccc----ccccccc
Confidence            111 1222346677899999999999764        35999999999999999998754211110000    0011234


Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCccccc
Q 039267          286 KRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYV  364 (502)
Q Consensus       286 ~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~  364 (502)
                      .+++..+..|+.|||+||+|||+++||||||||+||||++++++||+|||+|+.+...+.. ..+...||+.|||||++.
T Consensus       141 ~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  220 (308)
T 4gt4_A          141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM  220 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHh
Confidence            6899999999999999999999999999999999999999999999999999987554433 345678999999999998


Q ss_pred             CCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCc
Q 039267          365 LPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSD  443 (502)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (502)
                      +..                      |+.++|||||||+||||+| |..|+............             .....
T Consensus       221 ~~~----------------------~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i-------------~~~~~  265 (308)
T 4gt4_A          221 YGK----------------------FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI-------------RNRQV  265 (308)
T ss_dssp             HCC----------------------CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH-------------HTTCC
T ss_pred             CCC----------------------CCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCCC
Confidence            644                      5567799999999999998 77776543321111110             11122


Q ss_pred             cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          444 FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       444 ~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .+.++.+++++++|+.+||+   .||++|||++||+++
T Consensus       266 ~~~p~~~~~~~~~li~~C~~---~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          266 LPCPDDCPAWVYALMIECWN---EFPSRRPRFKDIHSR  300 (308)
T ss_dssp             CCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCcccchHHHHHHHHHHcC---CChhHCcCHHHHHHH
Confidence            34566789999999999999   777999999999875


No 12 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=4.6e-54  Score=429.67  Aligned_cols=272  Identities=20%  Similarity=0.247  Sum_probs=200.1

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEec-----CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccch
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVP-----KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFG  206 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~  206 (502)
                      +++++++|.+.++||+|+||+||+|++..     +++.||||+++....                           ....
T Consensus         8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---------------------------~~~~   60 (299)
T 4asz_A            8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD---------------------------NARK   60 (299)
T ss_dssp             CBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH---------------------------HHHH
T ss_pred             cccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh---------------------------HHHH
Confidence            35788999999999999999999999753     456677776653210                           0011


Q ss_pred             hhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccc
Q 039267          207 DYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTK  286 (502)
Q Consensus       207 ~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  286 (502)
                      .+. .+...+++++|||||+++|+|...        +..+||||||++|||.++|+..+....       ..........
T Consensus        61 ~f~-~E~~il~~l~HpnIV~l~g~~~~~--------~~~~lV~Ey~~~G~L~~~l~~~~~~~~-------~~~~~~~~~~  124 (299)
T 4asz_A           61 DFH-REAELLTNLQHEHIVKFYGVCVEG--------DPLIMVFEYMKHGDLNKFLRAHGPDAV-------LMAEGNPPTE  124 (299)
T ss_dssp             HHH-HHHHHHTTCCCTTBCCEEEEECSS--------SSEEEEEECCTTCBHHHHHHHTSHHHH-------HC----CCCC
T ss_pred             HHH-HHHHHHHhCCCCCCccEEEEEeeC--------CEEEEEEEcCCCCcHHHHHHhcCcccc-------cccccCCCCC
Confidence            111 122346677899999999999763        359999999999999999987531000       0001122346


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccC
Q 039267          287 RSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       287 l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~  365 (502)
                      +++..+..|+.||++||+|||+++||||||||+||||+.++++||+|||+|+........ ......||+.|||||++.+
T Consensus       125 l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~  204 (299)
T 4asz_A          125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  204 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcC
Confidence            899999999999999999999999999999999999999999999999999976554433 3345679999999999986


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcc
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDF  444 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (502)
                      ..                      |+.++|||||||+||||+| |..|+......-.......             ....
T Consensus       205 ~~----------------------~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~-------------~~~~  249 (299)
T 4asz_A          205 RK----------------------FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ-------------GRVL  249 (299)
T ss_dssp             CC----------------------CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH-------------TCCC
T ss_pred             CC----------------------CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-------------CCCC
Confidence            43                      5567899999999999998 8888755432211110000             1122


Q ss_pred             ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          445 TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       445 ~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      +.+..+++++++|+.+||+   .||++|||+++|  |+|++.
T Consensus       250 ~~p~~~~~~~~~li~~cl~---~dP~~RPs~~~i--~~~L~~  286 (299)
T 4asz_A          250 QRPRTCPQEVYELMLGCWQ---REPHMRKNIKGI--HTLLQN  286 (299)
T ss_dssp             CCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHH--HHHHHH
T ss_pred             CCCccchHHHHHHHHHHcC---CChhHCcCHHHH--HHHHHH
Confidence            3456789999999999999   677999999999  456654


No 13 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=1e-52  Score=436.05  Aligned_cols=282  Identities=19%  Similarity=0.238  Sum_probs=209.6

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++++.||+|+||+||+|++..+|+.||||++++....  .....                       ...+ +...+
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~--~~~~~-----------------------~~~~-Ei~il  107 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV--VTNAK-----------------------RTLR-ELKIL  107 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS--HHHHH-----------------------HHHH-HHHHH
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc--hHHHH-----------------------HHHH-HHHHH
Confidence            5799999999999999999999999999999998753220  00000                       1111 11235


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++.....  +...+..||||||| +|+|.+++...+                    .+++..++.|+
T Consensus       108 ~~l~HpnIv~l~~~~~~~~~--~~~~~~~~ivmE~~-~g~L~~~i~~~~--------------------~l~~~~~~~~~  164 (398)
T 4b99_A          108 KHFKHDNIIAIKDILRPTVP--YGEFKSVYVVLDLM-ESDLHQIIHSSQ--------------------PLTLEHVRYFL  164 (398)
T ss_dssp             HHCCCTTBCCEEEECCCSSC--TTTCCCEEEEEECC-SEEHHHHHTSSS--------------------CCCHHHHHHHH
T ss_pred             HhcCCCCcceEeeeeecccc--cccCCEEEEEEeCC-CCCHHHHHHhcC--------------------CCCHHHHHHHH
Confidence            66679999999998865422  12345799999999 588999998654                    68999999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCC---ccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGK---NYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      +||+.||+|||++|||||||||+|||++.++.+||+|||+|+.+....   .......+||+.|||||++.+..      
T Consensus       165 ~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~------  238 (398)
T 4b99_A          165 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH------  238 (398)
T ss_dssp             HHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCS------
T ss_pred             HHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCC------
Confidence            999999999999999999999999999999999999999999764432   22345678999999999987632      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhhHHHHHhhccChH-HHHH---------hhhcc
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNFNMEIKTAQYDLN-KWRE---------YTRLR  441 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~~~~~~~~~~~~~-~~~~---------~~~~~  441 (502)
                                     .++.++||||+||++|||++|..|+....  ..+..+....+.... .|..         .....
T Consensus       239 ---------------~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~  303 (398)
T 4b99_A          239 ---------------EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLP  303 (398)
T ss_dssp             ---------------CCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSC
T ss_pred             ---------------CCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCC
Confidence                           34567899999999999999988875433  333334333332211 1110         00010


Q ss_pred             Ccc-----ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          442 SDF-----TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       442 ~~~-----~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      ...     ...+..++++.+||.+||+   .||++|||++|+|+||||+...+..
T Consensus       304 ~~~~~~~~~~~~~~s~~~~dLl~~mL~---~dP~~R~ta~e~L~Hp~f~~~~~p~  355 (398)
T 4b99_A          304 PRQPVPWETVYPGADRQALSLLGRMLR---FEPSARISAAAALRHPFLAKYHDPD  355 (398)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHSC---SSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred             CcCCCCHHHhCCCCCHHHHHHHHHHCc---CChhHCcCHHHHhcCHhhCcCCCCc
Confidence            000     1234578999999999999   7779999999999999999766544


No 14 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.2e-52  Score=424.89  Aligned_cols=271  Identities=18%  Similarity=0.209  Sum_probs=192.5

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEec-----CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccch
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVP-----KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFG  206 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~  206 (502)
                      +++.+++|.+.++||+|+||+||+|++..     +++.||||+++....                           ....
T Consensus        36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---------------------------~~~~   88 (329)
T 4aoj_A           36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---------------------------SARQ   88 (329)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSH---------------------------HHHH
T ss_pred             cccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCH---------------------------HHHH
Confidence            45788899999999999999999998753     466777777653210                           0011


Q ss_pred             hhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccc
Q 039267          207 DYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTK  286 (502)
Q Consensus       207 ~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  286 (502)
                      .+. .+...+.+++|||||+++|+|...        +..+||||||++|||.++|+..+.......     .........
T Consensus        89 ~f~-~E~~il~~l~HpnIV~l~g~~~~~--------~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~-----~~~~~~~~~  154 (329)
T 4aoj_A           89 DFQ-REAELLTMLQHQHIVRFFGVCTEG--------RPLLMVFEYMRHGDLNRFLRSHGPDAKLLA-----GGEDVAPGP  154 (329)
T ss_dssp             HHH-HHHHHHTTCCCTTBCCEEEEECSS--------SSEEEEEECCTTCBHHHHHHTSSCC----------------CCS
T ss_pred             HHH-HHHHHHHhCCCCCCCcEEEEEEEC--------CEEEEEEEcCCCCcHHHHHHhcCccccccc-----ccccccCCC
Confidence            111 122346677899999999999763        359999999999999999987642111000     001112346


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccC
Q 039267          287 RSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       287 l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~  365 (502)
                      +++..+..|+.||++||+|||+++||||||||+||||+.++++||+|||+|+.+...+.. ..+...||+.|||||++.+
T Consensus       155 l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~  234 (329)
T 4aoj_A          155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY  234 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcC
Confidence            899999999999999999999999999999999999999999999999999977554433 3455689999999999986


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcc
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDF  444 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (502)
                      ..                      |+.++|||||||+||||+| |..|+..............             ....
T Consensus       235 ~~----------------------~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~-------------g~~~  279 (329)
T 4aoj_A          235 RK----------------------FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ-------------GREL  279 (329)
T ss_dssp             CC----------------------CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH-------------TCCC
T ss_pred             CC----------------------CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-------------CCCC
Confidence            44                      4567799999999999999 8888754432211111011             1123


Q ss_pred             ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          445 TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       445 ~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      +.+..+++++++|+.+||+   .||++|||++||+++
T Consensus       280 ~~p~~~~~~~~~li~~cl~---~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          280 ERPRACPPEVYAIMRGCWQ---REPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCCTTCCHHHHHHHHHHCC---SSTTTSCCHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHcC---cChhHCcCHHHHHHH
Confidence            4556789999999999999   677999999999865


No 15 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=6.6e-52  Score=423.11  Aligned_cols=281  Identities=16%  Similarity=0.188  Sum_probs=204.0

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      .+||+++++|++++.||+|+||+||+|++..++..+|                    .+.||+|.++..... .+...+.
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~--------------------~k~VAvK~l~~~~~~-~~~~~~~  115 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTAT--------------------CRTVAVKMLKEGATH-SEHRALM  115 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTC--------------------EEEEEEEEECTTCCH-HHHHHHH
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccC--------------------CeEEEEEEEccccCh-HHHHHHH
Confidence            3689999999999999999999999999876543221                    133444444422111 1122223


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      .+........+|||||+++|+|..+       ++..+||||||++|||.++|+..+.......    ...+......+++
T Consensus       116 ~E~~il~~l~hhpnIV~l~g~~~~~-------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~----~~~~~~~~~~l~~  184 (353)
T 4ase_A          116 SELKILIHIGHHLNVVNLLGACTKP-------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK----VAPEDLYKDFLTL  184 (353)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECCT-------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-----------CTTCBCH
T ss_pred             HHHHHHHHcCCCCcEEEEEEEEEec-------CCEEEEEEEcCCCCCHHHHHHhccccccccc----ccchhhccccCCH
Confidence            3333322333569999999998753       2358999999999999999987531100000    0001112345899


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      ..+..|+.|||+||+|||+++||||||||+|||++.++++||+|||+|+.+..+..+ ..+...||+.|||||++.+.  
T Consensus       185 ~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~--  262 (353)
T 4ase_A          185 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR--  262 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcC--
Confidence            999999999999999999999999999999999999999999999999987654433 34567899999999999864  


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcch--hhHHHHHhhccChHHHHHhhhccCccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLK--NFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                                          .|+.++|||||||+||||+| |..|+.....  .+...+..              .....
T Consensus       263 --------------------~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~--------------g~~~~  308 (353)
T 4ase_A          263 --------------------VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE--------------GTRMR  308 (353)
T ss_dssp             --------------------CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH--------------TCCCC
T ss_pred             --------------------CCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc--------------CCCCC
Confidence                                35567899999999999998 8888754332  22221111              12234


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .++.+++++++||.+||+   .||++|||++||++|
T Consensus       309 ~p~~~~~~~~~li~~c~~---~dP~~RPt~~eil~~  341 (353)
T 4ase_A          309 APDYTTPEMYQTMLDCWH---GEPSQRPTFSELVEH  341 (353)
T ss_dssp             CCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcC---cChhHCcCHHHHHHH
Confidence            556789999999999999   777999999999998


No 16 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1e-51  Score=423.66  Aligned_cols=268  Identities=21%  Similarity=0.285  Sum_probs=193.7

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEe---cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIV---PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~---~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .++|++.++||+|+||+||+|+..   .+++.||+|.+.....                             ......+.
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-----------------------------~~~~~~E~   70 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-----------------------------PIRIAAEL   70 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-----------------------------HHHHHHHH
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-----------------------------HHHHHHHH
Confidence            357999999999999999999875   3456777776643210                             00111122


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ........||||++++++|..        +++.+|||||+++|+|.+++.                       .+++..+
T Consensus        71 ~~l~~~~~h~nIv~l~~~~~~--------~~~~~lvmE~~~g~~L~~~~~-----------------------~l~~~~~  119 (361)
T 4f9c_A           71 QCLTVAGGQDNVMGVKYCFRK--------NDHVVIAMPYLEHESFLDILN-----------------------SLSFQEV  119 (361)
T ss_dssp             HHHHHTCSBTTBCCCSEEEEE--------TTEEEEEEECCCCCCHHHHHT-----------------------TCCHHHH
T ss_pred             HHHHHhcCCCCCceEEEEEEE--------CCEEEEEEeCCCcccHHHHHc-----------------------CCCHHHH
Confidence            222222369999999999875        446999999999999999984                       3678899


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-CcEEEeeccccccccCCCc--------------------------
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKR-GQIKLIDFGAATDLRIGKN--------------------------  345 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~-~~~kL~DFGla~~~~~~~~--------------------------  345 (502)
                      +.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+.......                          
T Consensus       120 ~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (361)
T 4f9c_A          120 REYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSR  199 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999999877 8999999999986543211                          


Q ss_pred             -cCCCcccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH--
Q 039267          346 -YVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM--  422 (502)
Q Consensus       346 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~--  422 (502)
                       ......+||+.|||||++.+..                     .|+.++||||+||++|||++|..|+..+.+....  
T Consensus       200 ~~~~~~~~GT~~Y~APE~l~~~~---------------------~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~  258 (361)
T 4f9c_A          200 RQQVAPRAGTPGFRAPEVLTKCP---------------------NQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALA  258 (361)
T ss_dssp             ------CCCCGGGCCHHHHTTCS---------------------CCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred             cccccccccCccccCHHHHcCCC---------------------CCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence             1123457999999999997532                     3556789999999999999999998765543322  


Q ss_pred             -HHHhhccCh-HHH-------------------HHh------------------hhccCccccccCCchHHHHHHHHhhh
Q 039267          423 -EIKTAQYDL-NKW-------------------REY------------------TRLRSDFTILDLDSGRGWDLATKLIS  463 (502)
Q Consensus       423 -~~~~~~~~~-~~~-------------------~~~------------------~~~~~~~~~~~~~s~~~~~Li~~~L~  463 (502)
                       +....+... ..+                   ...                  .........+...|++++||+.+||+
T Consensus       259 ~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~  338 (361)
T 4f9c_A          259 QIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLD  338 (361)
T ss_dssp             HHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTC
T ss_pred             HHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCc
Confidence             222111100 000                   000                  00011122345689999999999999


Q ss_pred             ccCCCCCCCcCHHHHhcCCccccC
Q 039267          464 ERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       464 ~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                         .||++|||++|+|+||||++.
T Consensus       339 ---~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          339 ---LNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             ---SCTTTSCCHHHHHTSGGGTTC
T ss_pred             ---CChhHCcCHHHHhcCcccCCC
Confidence               778999999999999999853


No 17 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.5e-50  Score=439.01  Aligned_cols=265  Identities=20%  Similarity=0.217  Sum_probs=210.3

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|++.++||+|+||+||+|+...+|+.||+|++.+....       .               .........+..+
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~-------~---------------~~~~~~~~~E~~~  242 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-------M---------------KQGETLALNERIM  242 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-------H---------------TTCHHHHHHHHHH
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcc-------h---------------hhhHHHHHHHHHH
Confidence            46778999999999999999999999999999999999863210       0               0001111112222


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||++++++|..        ++.+||||||++||+|.++|...+                    .+++..+
T Consensus       243 l~ll~~~~HP~IV~l~~~f~~--------~~~lylVmEy~~GGdL~~~l~~~~--------------------~l~E~~a  294 (689)
T 3v5w_A          243 LSLVSTGDCPFIVCMSYAFHT--------PDKLSFILDLMNGGDLHYHLSQHG--------------------VFSEADM  294 (689)
T ss_dssp             HHHHSSSCCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHHC--------------------CCCHHHH
T ss_pred             HHHHhhCCCCCEeEEEEEEEE--------CCEEEEEEecCCCCcHHHHHHhcC--------------------CCCHHHH
Confidence            234566789999999999976        446999999999999999998764                    6899999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+....   ....+||+.|||||++..+      
T Consensus       295 ~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~---~~t~~GTp~YmAPEvl~~~------  365 (689)
T 3v5w_A          295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKG------  365 (689)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC---CCSCCSCGGGCCHHHHSTT------
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC---CCCccCCcCccCHHHHhCC------
Confidence            9999999999999999999999999999999999999999999999865433   3467899999999999642      


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh-hHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN-FNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                     ..|+.++|||||||+||||++|..|+...... .......          .  .......++.+|
T Consensus       366 ---------------~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~----------i--~~~~~~~p~~~S  418 (689)
T 3v5w_A          366 ---------------VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM----------T--LTMAVELPDSFS  418 (689)
T ss_dssp             ---------------CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH----------H--HHCCCCCCTTSC
T ss_pred             ---------------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh----------h--cCCCCCCCccCC
Confidence                           24667889999999999999999998654322 1111110          0  112234556789


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcC-----HHHHhcCCcccc
Q 039267          452 GRGWDLATKLISERGFLRRGRLS-----AAAALRHPYFLL  486 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps-----~~evl~HP~f~~  486 (502)
                      +++++||.+||+   .||.+|++     ++||++||||+.
T Consensus       419 ~~a~dLI~~lL~---~dP~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          419 PELRSLLEGLLQ---RDVNRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             HHHHHHHHHHTC---SCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred             HHHHHHHHHHcc---CCHhHCCCCCCCCHHHHhcCccccC
Confidence            999999999999   66699998     899999999984


No 18 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.7e-50  Score=401.99  Aligned_cols=269  Identities=18%  Similarity=0.220  Sum_probs=188.2

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.++||+|+||+||+|++  +|+.||||+++....                             .....+.....+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-----------------------------~~~~~e~Ei~~~   51 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-----------------------------RSWFREAEIYQT   51 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH-----------------------------HHHHHHHHHHTS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch-----------------------------hhHHHHHHHHHH
Confidence            3589999999999999999986  688899988754210                             011122223345


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..++||||++++|+|..+...    ....+||||||++|||.++|+..                     .+++..+..++
T Consensus        52 ~~l~HpNIv~l~g~~~~~~~~----~~~~~lV~Ey~~~gsL~~~l~~~---------------------~l~~~~~~~i~  106 (303)
T 3hmm_A           52 VMLRHENILGFIAADNKDNGT----WTQLWLVSDYHEHGSLFDYLNRY---------------------TVTVEGMIKLA  106 (303)
T ss_dssp             TTCCCTTBCCEEEEEEEECSS----SEEEEEEEECCTTCBHHHHHHHC---------------------CBCHHHHHHHH
T ss_pred             hcCCCCCCCcEEEEEEecCCC----ceEEEEEecCCCCCcHHHHHHhC---------------------CCCHHHHHHHH
Confidence            677899999999999865321    22489999999999999999865                     47899999999


Q ss_pred             HHHHHHHHHHHHc--------CCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---CCCcccCCCCcCCcccccC
Q 039267          297 RQIITSLKKIHDT--------GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       297 ~qia~gL~yLH~~--------~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~  365 (502)
                      .|+++||+|||++        +||||||||+||||+.++++||+|||+|+........   .....+||+.|||||++.+
T Consensus       107 ~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~  186 (303)
T 3hmm_A          107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  186 (303)
T ss_dssp             HHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcc
Confidence            9999999999987        9999999999999999999999999999977544322   2345679999999999976


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch---hhHHHHHhhccChHHHHHh-h--h
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK---NFNMEIKTAQYDLNKWREY-T--R  439 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~-~--~  439 (502)
                      .....                ...++.++|||||||+||||+||..|+.....   ++... ............. .  .
T Consensus       187 ~~~~~----------------~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~  249 (303)
T 3hmm_A          187 SINMK----------------HFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL-VPSDPSVEEMRKVVCEQK  249 (303)
T ss_dssp             CSCTT----------------CHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT-SCSSCCHHHHHHHHTTSC
T ss_pred             ccccc----------------CCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhc-ccccchHHHHHHHHhccc
Confidence            43211                12355688999999999999998655432111   11000 0000001111110 0  1


Q ss_pred             ccCcccc---ccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          440 LRSDFTI---LDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       440 ~~~~~~~---~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .++.++.   ....+..+.+|+.+||+   .||++||||+||++.
T Consensus       250 ~rp~~p~~~~~~~~~~~l~~li~~cl~---~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          250 LRPNIPNRWQSCEALRVMAKIMRECWY---ANGAARLTALRIKKT  291 (303)
T ss_dssp             CCCCCCGGGGSSHHHHHHHHHHHTTCC---SSGGGSCCHHHHHHH
T ss_pred             CCCCCCccccchHHHHHHHHHHHHHcc---cCHhHCcCHHHHHHH
Confidence            1122111   11134578899999999   777999999999864


No 19 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=3.7e-49  Score=427.82  Aligned_cols=262  Identities=21%  Similarity=0.264  Sum_probs=205.9

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||+||+|+++.+|+.||+|++.....    ...+                       ... .+...
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~----~~~~-----------------------~~~-~Ei~i  207 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE----SDKE-----------------------TVR-KEIQT  207 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH----HHHH-----------------------HHH-HHHHH
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch----hhHH-----------------------HHH-HHHHH
Confidence            4689999999999999999999999999999998875221    0000                       011 11123


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||++++++|..        ++..+||||||++|+|.++|.+..                   ..+++..++.+
T Consensus       208 l~~l~hpnIv~l~~~~~~--------~~~~~iv~E~~~gg~L~~~i~~~~-------------------~~l~e~~~~~~  260 (573)
T 3uto_A          208 MSVLRHPTLVNLHDAFED--------DNEMVMIYEFMSGGELFEKVADEH-------------------NKMSEDEAVEY  260 (573)
T ss_dssp             HHHTCCTTBCCEEEEEEC--------SSEEEEEEECCCCCBHHHHHTCTT-------------------SCEEHHHHHHH
T ss_pred             HHhCCCCCCCeEEEEEEE--------CCEEEEEEeecCCCcHHHHHHHhC-------------------CCCCHHHHHHH
Confidence            566789999999999876        346999999999999999997542                   25899999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccC--CcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKR--GQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~--~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      ++||+.||+|||+++|+||||||+|||++.+  +.+||+|||+|+.+.....  ....+||+.|||||++.+..      
T Consensus       261 ~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~--~~~~~GT~~y~APEv~~~~~------  332 (573)
T 3uto_A          261 MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKP------  332 (573)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE--EEEECSSGGGCCHHHHTTCC------
T ss_pred             HHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc--eeeeEECccccCHHHhCCCC------
Confidence            9999999999999999999999999999854  8999999999998765432  23567999999999997643      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH-HHHhhccChHHHHHhhhccCccccccCCch
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM-EIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                      |+.++|||||||++|||++|..|+......... .+....+           ......+..+|+
T Consensus       333 ----------------y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~-----------~~~~~~~~~~s~  385 (573)
T 3uto_A          333 ----------------VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW-----------NMDDSAFSGISE  385 (573)
T ss_dssp             ----------------BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC-----------CCCSGGGTTSCH
T ss_pred             ----------------CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC-----------CCCcccccCCCH
Confidence                            456789999999999999999997654332111 1111111           112234456799


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      ++++||.+||+   .||++|||++|+|+||||+.....
T Consensus       386 ~~~dli~~~L~---~dp~~R~t~~e~l~Hpw~~~~~~~  420 (573)
T 3uto_A          386 DGKDFIRKLLL---ADPNTRMTIHQALEHPWLTPGNAP  420 (573)
T ss_dssp             HHHHHHHTTSC---SSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred             HHHHHHHHHcc---CChhHCcCHHHHhcCcCcCCCCCC
Confidence            99999999999   777999999999999999976543


No 20 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.5e-46  Score=380.67  Aligned_cols=262  Identities=17%  Similarity=0.229  Sum_probs=206.1

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|++.+.||+|+||.||+|++..+|+.||||++......                         ......+.+ +.
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~-E~   65 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-------------------------PTSLQKLFR-EV   65 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-------------------------HHHHHHHHH-HH
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC-------------------------HHHHHHHHH-HH
Confidence            4557899999999999999999999999999999988763210                         000111111 12


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++
T Consensus        66 ~~l~~l~hpnIv~l~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~l~~~~~~  117 (328)
T 3fe3_A           66 RIMKILNHPNIVKLFEVIET--------EKTLYLIMEYASGGEVFDYLVAHG--------------------RMKEKEAR  117 (328)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--------SSEEEEEECCCTTCBHHHHHHHHC--------------------CCCHHHHH
T ss_pred             HHHHhCCCCCEeeEEEEEEE--------CCEEEEEEECCCCCcHHHHHHHcC--------------------CCCHHHHH
Confidence            23566679999999999865        346999999999999999998764                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....+..  .....||+.|+|||++.+..+.    
T Consensus       118 ~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~----  191 (328)
T 3fe3_A          118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGKKYD----  191 (328)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG--GGTTSSSGGGCCHHHHHTCCCC----
T ss_pred             HHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc--cccccCCcceeCcccccCCCcC----
Confidence            9999999999999999999999999999999999999999999987654432  3456799999999999864432    


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                       +.++|||||||++|||++|..|+............            .  ......+...+.+
T Consensus       192 -----------------~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i------------~--~~~~~~p~~~s~~  240 (328)
T 3fe3_A          192 -----------------GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV------------L--RGKYRIPFYMSTD  240 (328)
T ss_dssp             -----------------SHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------------H--HCCCCCCTTSCHH
T ss_pred             -----------------CchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHH------------H--hCCCCCCCCCCHH
Confidence                             24679999999999999999987554322111100            0  1122334457899


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      +.+|+.+||+   .||.+|||++|+++||||+...+
T Consensus       241 ~~~li~~~L~---~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          241 CENLLKRFLV---LNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             HHHHHHHHCC---SSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             HHHHHHHHCC---CChhHCcCHHHHhcCHhhcCCCc
Confidence            9999999999   77799999999999999986543


No 21 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=2.7e-46  Score=373.02  Aligned_cols=262  Identities=18%  Similarity=0.257  Sum_probs=206.9

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.+.||+|+||+||+|.+..+|+.||+|++.......          .                  ........
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~------------------~~~~~E~~   69 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----------K------------------ELIINEIL   69 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC----------H------------------HHHHHHHH
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH----------H------------------HHHHHHHH
Confidence            4467999999999999999999998899999999876532110          0                  00111123


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++...        +..++||||+++|+|.+++...                     .+++..++.
T Consensus        70 ~l~~l~hp~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~---------------------~~~~~~~~~  120 (297)
T 3fxz_A           70 VMRENKNPNIVNYLDSYLVG--------DELWVVMEYLAGGSLTDVVTET---------------------CMDEGQIAA  120 (297)
T ss_dssp             HHHHCCCTTBCCEEEEEEET--------TEEEEEEECCTTCBHHHHHHHS---------------------CCCHHHHHH
T ss_pred             HHhcCCCCCCCeEeEEEEEC--------CEEEEEEECCCCCCHHHHHhhc---------------------CCCHHHHHH
Confidence            35667899999999998763        4699999999999999999865                     378889999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..       
T Consensus       121 ~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-------  192 (297)
T 3fxz_A          121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKA-------  192 (297)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CBCCCCSCGGGCCHHHHHCSC-------
T ss_pred             HHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-ccCCccCCcCccChhhhcCCC-------
Confidence            999999999999999999999999999999999999999999987654432 334567999999999997643       


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                     ++.++|||||||++|||++|..|+............           .....+....+...+..+
T Consensus       193 ---------------~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~  246 (297)
T 3fxz_A          193 ---------------YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-----------ATNGTPELQNPEKLSAIF  246 (297)
T ss_dssp             ---------------BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----------HHHCSCCCSCGGGSCHHH
T ss_pred             ---------------CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------HhCCCCCCCCccccCHHH
Confidence                           445779999999999999999997654432221111           111122333455678999


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      .+|+.+||+   .||++|||++|+++||||+.....
T Consensus       247 ~~li~~~l~---~dp~~Rps~~ell~h~~~~~~~~~  279 (297)
T 3fxz_A          247 RDFLNRCLE---MDVEKRGSAKELLQHQFLKIAKPL  279 (297)
T ss_dssp             HHHHHHHSC---SSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HHHHHHHcc---CChhHCcCHHHHhhChhhcccCcc
Confidence            999999999   777999999999999999976543


No 22 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.7e-46  Score=381.70  Aligned_cols=259  Identities=19%  Similarity=0.259  Sum_probs=197.1

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.+.||+|+||+||+|++..+|+.||||++........   ..                       .+. .+..
T Consensus         8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~---~~-----------------------~~~-~Ei~   60 (347)
T 3zgw_A            8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD---LP-----------------------RIK-TEIE   60 (347)
T ss_dssp             TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CC-----------------------HHH-HHHH
T ss_pred             HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchH---HH-----------------------HHH-HHHH
Confidence            34689999999999999999999999999999999876432100   00                       111 1122


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++.
T Consensus        61 ~l~~l~hpnIv~l~~~~~~--------~~~~~lv~E~~~gg~L~~~l~~~~--------------------~l~~~~~~~  112 (347)
T 3zgw_A           61 ALKNLRHQHICQLYHVLET--------ANKIFMVLEYCPGGELFDYIISQD--------------------RLSEEETRV  112 (347)
T ss_dssp             HHHTCCCTTBCCEEEEEEC--------SSEEEEEEECCTTCBHHHHHHHHS--------------------SCCHHHHHH
T ss_pred             HHHhCCCCCEeeEEEEEEe--------CCEEEEEEeCCCCCCHHHHHHHcC--------------------CCCHHHHHH
Confidence            3556679999999999865        346999999999999999998764                    588999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.||+.||+|||+++|+||||||+|||++.++.+||+|||++...............||+.|+|||++.+..+      
T Consensus       113 i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~------  186 (347)
T 3zgw_A          113 VFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSY------  186 (347)
T ss_dssp             HHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--------------CGGGCCHHHHTTC--------
T ss_pred             HHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccccccCCccCccCHHHHcCCCC------
Confidence            99999999999999999999999999999999999999999998765544444456689999999999976432      


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH-HHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM-EIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                     ++.++|||||||++|||++|..|+......... .+..               .....+...+.+
T Consensus       187 ---------------~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~---------------~~~~~p~~~s~~  236 (347)
T 3zgw_A          187 ---------------LGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR---------------GKYDVPKWLSPS  236 (347)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---------------TCCCCCTTCCHH
T ss_pred             ---------------CCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---------------CCCCCCCCCCHH
Confidence                           245689999999999999999987654322111 1111               122344557899


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      +.+|+.+||+   .||.+|||++|+++||||...
T Consensus       237 ~~~li~~~L~---~dP~~Rps~~eil~hp~~~~~  267 (347)
T 3zgw_A          237 SILLLQQMLQ---VDPKKRISMKNLLNHPWIMQD  267 (347)
T ss_dssp             HHHHHHHHTC---SSGGGSCCHHHHHTCHHHHTT
T ss_pred             HHHHHHHHcc---cCHhHCcCHHHHhcCcchhcC
Confidence            9999999999   777999999999999999864


No 23 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.1e-45  Score=375.65  Aligned_cols=261  Identities=19%  Similarity=0.189  Sum_probs=203.7

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||.||+|+...+|+.||+|++++....          .              ........ ...
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~----------~--------------~~~~~~~~-~E~   56 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII----------A--------------KDEVAHTV-TES   56 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----------H--------------TTCHHHHH-HHH
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh----------h--------------hhHHHHHH-HHH
Confidence            3457899999999999999999999989999999998752110          0              00000111 111


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++
T Consensus        57 ~~l~~l~hp~iv~l~~~~~~--------~~~~~lv~E~~~gg~L~~~l~~~~--------------------~~~~~~~~  108 (337)
T 1o6l_A           57 RVLQNTRHPFLTALKYAFQT--------HDRLCFVMEYANGGELFFHLSRER--------------------VFTEERAR  108 (337)
T ss_dssp             HHHHSCCCTTBCCEEEEEEC--------SSEEEEEEECCTTCBHHHHHHHHS--------------------CCCHHHHH
T ss_pred             HHHHhCCCCcCcceEEEEEe--------CCEEEEEEeCCCCCcHHHHHHhcC--------------------CCCHHHHH
Confidence            23556789999999999875        346999999999999999998754                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+..      
T Consensus       109 ~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~------  181 (337)
T 1o6l_A          109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLEDND------  181 (337)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-CCBCCCEECGGGCCGGGGSSSC------
T ss_pred             HHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-CcccccccChhhCChhhhcCCC------
Confidence            999999999999999999999999999999999999999999998643322 2334668999999999997643      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                      ++.++|||||||++|||++|..|+...........            ...  .....+...+++
T Consensus       182 ----------------~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~------------i~~--~~~~~p~~~s~~  231 (337)
T 1o6l_A          182 ----------------YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL------------ILM--EEIRFPRTLSPE  231 (337)
T ss_dssp             ----------------BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------------HHH--CCCCCCTTSCHH
T ss_pred             ----------------CCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHH------------HHc--CCCCCCCCCCHH
Confidence                            44567999999999999999998765432211100            000  122234567999


Q ss_pred             HHHHHHHhhhccCCCCCCCc-----CHHHHhcCCccccC
Q 039267          454 GWDLATKLISERGFLRRGRL-----SAAAALRHPYFLLG  487 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rp-----s~~evl~HP~f~~~  487 (502)
                      +.+||.+||+   .||++||     +++|+++||||+..
T Consensus       232 ~~~li~~lL~---~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          232 AKSLLAGLLK---KDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHHHHHTC---SSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHhh---cCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            9999999999   6779999     89999999999853


No 24 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=9.8e-46  Score=367.10  Aligned_cols=273  Identities=22%  Similarity=0.322  Sum_probs=203.0

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++.......                         ..... ...+...+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------~~~~~-~~~E~~~l   55 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-------------------------GVPSS-ALREICLL   55 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-------------------------THHHH-HHHHHHHH
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcC-------------------------CcchH-HHHHHHHH
Confidence            57999999999999999999999899999999887532210                         00001 11122345


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++...        +..++||||++ |+|.+++...+                   ..+++..++.++
T Consensus        56 ~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~-~~l~~~~~~~~-------------------~~l~~~~~~~~~  107 (292)
T 3o0g_A           56 KELKHKNIVRLHDVLHSD--------KKLTLVFEFCD-QDLKKYFDSCN-------------------GDLDPEIVKSFL  107 (292)
T ss_dssp             TTCCCTTBCCEEEEEEET--------TEEEEEEECCS-EEHHHHHHHTT-------------------TCCCHHHHHHHH
T ss_pred             hcCCCCCEeeEEeEEEeC--------CEEEEEEecCC-CCHHHHHHhCC-------------------CCCCHHHHHHHH
Confidence            666799999999998753        46999999996 57777766532                   258899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .|++.||+|||++||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..         
T Consensus       108 ~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~---------  177 (292)
T 3o0g_A          108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAK---------  177 (292)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-CCCSCCSCGGGCCHHHHTTCS---------
T ss_pred             HHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-cccCCccccCCcChHHHcCCC---------
Confidence            9999999999999999999999999999999999999999987653322 334567899999999987532         


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH---HHHHhhcc-ChHHHHHhhhcc-----------
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN---MEIKTAQY-DLNKWREYTRLR-----------  441 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~-----------  441 (502)
                                  .++.++|||||||++|||++|..|+........   ......+. ....|.......           
T Consensus       178 ------------~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (292)
T 3o0g_A          178 ------------LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT  245 (292)
T ss_dssp             ------------CCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTT
T ss_pred             ------------CcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCC
Confidence                        245678999999999999998887655443322   22222221 222222222111           


Q ss_pred             -CccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          442 -SDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       442 -~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                       ......+..++++++|+.+||+   .||++|||++|+++||||++..
T Consensus       246 ~~~~~~~~~~~~~~~~li~~~L~---~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          246 TSLVNVVPKLNATGRDLLQNLLK---CNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CCCTTTSTTCCHHHHHHHHHHSC---SSGGGSCCHHHHHTSGGGTTC-
T ss_pred             cchhhcccccChHHHHHHHHHhc---cChhhCCCHHHHhcCcccccCC
Confidence             1112334578999999999999   7779999999999999998653


No 25 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=6.8e-45  Score=377.56  Aligned_cols=272  Identities=18%  Similarity=0.165  Sum_probs=204.0

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|++.++||+|+||+||+|++..+++.||+|++++.....           ...             ......+.
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-----------~~~-------------~~~~~~E~  103 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-----------DED-------------IDWVQTEK  103 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----------------------------CCHHHHHH
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-----------HHH-------------HHHHHHHH
Confidence            466778999999999999999999999999999999988643210           000             01111111


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ........||||++++++|..        .+..+|||||+++|+|.+++...+                    .+++..+
T Consensus       104 ~il~~~~~hp~Iv~l~~~~~~--------~~~~~lV~E~~~gg~L~~~l~~~~--------------------~l~~~~~  155 (396)
T 4dc2_A          104 HVFEQASNHPFLVGLHSCFQT--------ESRLFFVIEYVNGGDLMFHMQRQR--------------------KLPEEHA  155 (396)
T ss_dssp             HHHHHHTTCTTBCCEEEEEEC--------SSEEEEEEECCTTCBHHHHHHHHS--------------------SCCHHHH
T ss_pred             HHHHhcCCCCCcCeeEEEEEE--------CCEEEEEEEcCCCCcHHHHHHHcC--------------------CCCHHHH
Confidence            122223379999999999865        346999999999999999998764                    5889999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+...... ......+||+.|+|||++.+..     
T Consensus       156 ~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-~~~~~~~gt~~Y~aPE~l~~~~-----  229 (396)
T 4dc2_A          156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRGED-----  229 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-CCBCCCCBCGGGCCHHHHTTCC-----
T ss_pred             HHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC-CccccccCCcccCCchhhcCCC-----
Confidence            9999999999999999999999999999999999999999999998643222 2345678999999999997643     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                       ++.++|||||||++|||++|..|+............   .........  .......+...+.
T Consensus       230 -----------------~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~---~~~~~~~~i--~~~~~~~p~~~s~  287 (396)
T 4dc2_A          230 -----------------YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN---TEDYLFQVI--LEKQIRIPRSLSV  287 (396)
T ss_dssp             -----------------BCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C---CHHHHHHHH--HHCCCCCCTTSCH
T ss_pred             -----------------CChHHHHHHHHHHHHHHHhCCCCCcccccccccchh---hHHHHHHHH--hccccCCCCcCCH
Confidence                             456789999999999999999987532211100000   000001111  1123345566899


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCH------HHHhcCCccccC
Q 039267          453 RGWDLATKLISERGFLRRGRLSA------AAALRHPYFLLG  487 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~------~evl~HP~f~~~  487 (502)
                      ++.+||.+||+   .||.+||++      +|+++||||+..
T Consensus       288 ~~~~li~~lL~---~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          288 KAASVLKSFLN---KDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             HHHHHHHHHTC---SCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             HHHHHHHHHhc---CCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            99999999999   777999994      899999999853


No 26 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=3.1e-45  Score=375.89  Aligned_cols=265  Identities=22%  Similarity=0.292  Sum_probs=204.9

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+++.||+|+||+||+|+...+|+.||+|++++........                      .........+...
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~----------------------~~~~~~~~~E~~i   68 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR----------------------GVCREEIEREVSI   68 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSS----------------------SBCHHHHHHHHHH
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccc----------------------hhHHHHHHHHHHH
Confidence            457999999999999999999999999999999998743311000                      0000111112233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..+..+
T Consensus        69 l~~l~hpnIv~l~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~--------------------~l~~~~~~~i  120 (361)
T 2yab_A           69 LRQVLHPNIITLHDVYEN--------RTDVVLILELVSGGELFDFLAQKE--------------------SLSEEEATSF  120 (361)
T ss_dssp             HTTCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHTTCS--------------------CCBHHHHHHH
T ss_pred             HHhCCCcCCCcEEEEEEe--------CCEEEEEEEcCCCCcHHHHHHhcC--------------------CCCHHHHHHH
Confidence            566679999999999865        346999999999999999997653                    5889999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRG----QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~----~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      +.||+.||+|||++||+||||||+|||++.++    .+||+|||+++......  ......||+.|+|||++.+..    
T Consensus       121 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----  194 (361)
T 2yab_A          121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEP----  194 (361)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCC----
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC--ccccCCCCccEECchHHcCCC----
Confidence            99999999999999999999999999998877    79999999998765443  234567999999999987533    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh-HHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF-NMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                        ++.++|||||||++|||++|..|+....... ...+....+..           ....+...
T Consensus       195 ------------------~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~  245 (361)
T 2yab_A          195 ------------------LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF-----------DEEFFSQT  245 (361)
T ss_dssp             ------------------CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC-----------CHHHHTTS
T ss_pred             ------------------CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-----------CchhccCC
Confidence                              4567899999999999999999876543221 11111111111           11123457


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      ++++++||.+||.   .||++|||++|+++||||+...
T Consensus       246 s~~~~~li~~~L~---~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          246 SELAKDFIRKLLV---KETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             CHHHHHHHHHHSC---SSTTTSCCHHHHHTSTTTSCSS
T ss_pred             CHHHHHHHHHHCC---CChhHCcCHHHHhcCcCcCCCc
Confidence            8999999999999   7779999999999999999554


No 27 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=6.3e-46  Score=390.13  Aligned_cols=273  Identities=21%  Similarity=0.233  Sum_probs=206.7

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|++.++||+|+||+||+|++..+++.||+|++++....          .+              .....+.+ 
T Consensus        69 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~----------~~--------------~~~~~~~~-  123 (437)
T 4aw2_A           69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML----------KR--------------AETACFRE-  123 (437)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH----------HT--------------TTTCCHHH-
T ss_pred             ccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh----------hH--------------HHHHHHHH-
Confidence            347788999999999999999999999999999999988752110          00              00000111 


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      +...+..+.||||++++++|..        .+..+|||||+++|+|.+++...+                   ..+++..
T Consensus       124 E~~il~~~~hp~Iv~l~~~~~~--------~~~~~lV~Ey~~gg~L~~~l~~~~-------------------~~l~e~~  176 (437)
T 4aw2_A          124 ERDVLVNGDSKWITTLHYAFQD--------DNNLYLVMDYYVGGDLLTLLSKFE-------------------DRLPEEM  176 (437)
T ss_dssp             HHHHHHHSCTTTBCCEEEEEEC--------SSEEEEEECCCTTCBHHHHHHTTT-------------------TCCCHHH
T ss_pred             HHHHHHhCCCCCEEEEEEEEee--------CCEEEEEEecCCCCcHHHHHHHcc-------------------CCCCHHH
Confidence            1123456689999999999876        346999999999999999998632                   2588999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.............+||+.|||||++......  
T Consensus       177 ~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~--  254 (437)
T 4aw2_A          177 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG--  254 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTS--
T ss_pred             HHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccC--
Confidence            999999999999999999999999999999999999999999999987765554445567899999999998621100  


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHHhhccChHHHHHhhhccCccccccC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                     ...++.++|||||||++|||++|..|+.......  ..+..        +....   .-...+..
T Consensus       255 ---------------~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~--------~~~~~---~~p~~~~~  308 (437)
T 4aw2_A          255 ---------------KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN--------HKERF---QFPTQVTD  308 (437)
T ss_dssp             ---------------CCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--------HHHHC---CCCSSCCC
T ss_pred             ---------------CCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhh--------ccccc---cCCccccc
Confidence                           1235568899999999999999999986543221  11111        00000   00112244


Q ss_pred             CchHHHHHHHHhhhccCCCCCC--CcCHHHHhcCCccccC
Q 039267          450 DSGRGWDLATKLISERGFLRRG--RLSAAAALRHPYFLLG  487 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~--Rps~~evl~HP~f~~~  487 (502)
                      .++++++||++||.   .+|++  ||+++|+++||||+..
T Consensus       309 ~s~~~~dLi~~lL~---~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          309 VSENAKDLIRRLIC---SREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             SCHHHHHHHHTTSS---CGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             CCHHHHHHHHHHhc---ccccccCCCCHHHHhCCCccCCC
Confidence            79999999999998   44466  9999999999999853


No 28 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=3.2e-45  Score=374.67  Aligned_cols=262  Identities=21%  Similarity=0.219  Sum_probs=197.0

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|++.+.||+|+||+||+|++..+|+.||+|++++....          .              .........+
T Consensus        18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~----------~--------------~~~~~~~~~E   73 (353)
T 3txo_A           18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL----------Q--------------DDDVECTMTE   73 (353)
T ss_dssp             -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH----------H--------------HTTHHHHHHH
T ss_pred             CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc----------c--------------hhHHHHHHHH
Confidence            346778999999999999999999999999999999988752110          0              0000111111


Q ss_pred             HHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          212 FNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       212 ~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      .. .+..+ .||||+++++++..        .+..+|||||+++|+|.+++...+                    .+++.
T Consensus        74 ~~-il~~~~~hp~Iv~l~~~~~~--------~~~~~lv~E~~~gg~L~~~l~~~~--------------------~~~~~  124 (353)
T 3txo_A           74 KR-ILSLARNHPFLTQLFCCFQT--------PDRLFFVMEFVNGGDLMFHIQKSR--------------------RFDEA  124 (353)
T ss_dssp             HH-HHHHTTTCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHS--------------------SCCHH
T ss_pred             HH-HHHhccCCCceeeEEEEEEe--------CCEEEEEEeCCCCCcHHHHHHHcC--------------------CCCHH
Confidence            11 12223 69999999999865        346999999999999999998764                    58899


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+...... ......+||+.|+|||++.+.    
T Consensus       125 ~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~----  199 (353)
T 3txo_A          125 RARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG-VTTATFCGTPDYIAPEILQEM----  199 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----------CCGGGCCHHHHHHH----
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC-ccccccCCCcCeEChhhcCCC----
Confidence            999999999999999999999999999999999999999999999998643322 233456899999999998753    


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                        .++.++|||||||++|||++|..|+........ ..+..               .....+..
T Consensus       200 ------------------~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~---------------~~~~~p~~  246 (353)
T 3txo_A          200 ------------------LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN---------------DEVVYPTW  246 (353)
T ss_dssp             ------------------HCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---------------CCCCCCTT
T ss_pred             ------------------CcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHc---------------CCCCCCCC
Confidence                              345678999999999999999998765433211 11111               12223445


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCH------HHHhcCCccccC
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSA------AAALRHPYFLLG  487 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~------~evl~HP~f~~~  487 (502)
                      .+.++.+|+.+||+   .||.+||++      +++++||||+..
T Consensus       247 ~~~~~~~li~~lL~---~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          247 LHEDATGILKSFMT---KNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             SCHHHHHHHHHHTC---SSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             CCHHHHHHHHHHhh---hCHHHccCCcccCCHHHHhhCCcccCC
Confidence            78999999999999   666999998      999999999854


No 29 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=7.4e-45  Score=361.85  Aligned_cols=288  Identities=16%  Similarity=0.201  Sum_probs=201.1

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeeccc-ccCCcccchhhHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKI-GVQGAEEFGDYEEWF  212 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~-~~~~~~~~~~~~~~~  212 (502)
                      +..++|.+.+.||+|+||.||+|++..+|+.||+|++........... ... ......+.... ..........+.+ +
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-E   86 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGF-PRR-PPPRGTRPAPGGCIQPRGPIEQVYQ-E   86 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC---------------------------------CHHHH-H
T ss_pred             eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhccc-ccc-cccccccccccccccccchHHHHHH-H
Confidence            456789999999999999999999999999999999986432110000 000 00000000000 0000111112222 2


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++....      .+..++||||+++++|.+++...                     .+++..+
T Consensus        87 ~~~l~~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~---------------------~~~~~~~  139 (298)
T 2zv2_A           87 IAILKKLDHPNVVKLVEVLDDPN------EDHLYMVFELVNQGPVMEVPTLK---------------------PLSEDQA  139 (298)
T ss_dssp             HHHHHTCCCTTBCCEEEEEECSS------SSEEEEEEECCTTCBSCCSSCSS---------------------CCCHHHH
T ss_pred             HHHHHhCCCCCCCeEEEEEEcCC------CCEEEEEEecCCCCcHHHHhhcC---------------------CCCHHHH
Confidence            23466778999999999987532      34689999999999998765432                     5789999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+....   
T Consensus       140 ~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~---  215 (298)
T 2zv2_A          140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKI---  215 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCC---
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCC---
Confidence            99999999999999999999999999999999999999999999987654332 23456799999999998753311   


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                      .++.++|||||||++|||++|..|+..........            ........++.....++
T Consensus       216 ----------------~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~------------~~~~~~~~~~~~~~~~~  267 (298)
T 2zv2_A          216 ----------------FSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS------------KIKSQALEFPDQPDIAE  267 (298)
T ss_dssp             ----------------EESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------------HHHHCCCCCCSSSCCCH
T ss_pred             ----------------CCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHH------------HHhcccCCCCCccccCH
Confidence                            12356799999999999999999876543211110            01111112223345789


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      ++.+|+.+||+   .||++|||++|+++||||++
T Consensus       268 ~l~~li~~~l~---~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          268 DLKDLITRMLD---KNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             HHHHHHHHHTC---SCTTTSCCHHHHTTCHHHHC
T ss_pred             HHHHHHHHHhh---cChhhCCCHHHHhcCccccC
Confidence            99999999999   77799999999999999963


No 30 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=4.3e-45  Score=367.53  Aligned_cols=286  Identities=24%  Similarity=0.318  Sum_probs=193.4

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||+||+|+...+|+.||+|+++......   ......+                        +...
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~------------------------E~~~   56 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG---TPSTAIR------------------------EISL   56 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTC---SCHHHHH------------------------HHHH
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc---cHHHHHH------------------------HHHH
Confidence            357999999999999999999998899999999887532110   0000111                        1223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..        ++..++||||++ |+|.+++.....              ......+++..++.+
T Consensus        57 l~~l~hp~iv~~~~~~~~--------~~~~~lv~e~~~-~~L~~~l~~~~~--------------~~~~~~~~~~~~~~~  113 (317)
T 2pmi_A           57 MKELKHENIVRLYDVIHT--------ENKLTLVFEFMD-NDLKKYMDSRTV--------------GNTPRGLELNLVKYF  113 (317)
T ss_dssp             HTTCCBTTBCCEEEEECC--------TTEEEEEEECCC-CBHHHHHHHHHS--------------SSCCCCCCHHHHHHH
T ss_pred             HHhcCCCCcceEEEEEEE--------CCeEEEEEEecC-CCHHHHHHhccc--------------cccccCCCHHHHHHH
Confidence            566679999999999875        346999999996 799999986531              112235889999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.         
T Consensus       114 ~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~---------  183 (317)
T 2pmi_A          114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-TFSSEVVTLWYRAPDVLMGS---------  183 (317)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC-CCCCCCSCCTTCCHHHHTTC---------
T ss_pred             HHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc-cCCCCcccccccCchHhhCC---------
Confidence            99999999999999999999999999999999999999999987654322 23455789999999998652         


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhcc-ChHHHHHhhhccC---c------
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQY-DLNKWREYTRLRS---D------  443 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~---~------  443 (502)
                                  ..++.++|||||||++|||++|..|+......  ........+. ....|........   .      
T Consensus       184 ------------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (317)
T 2pmi_A          184 ------------RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPP  251 (317)
T ss_dssp             ------------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCC
T ss_pred             ------------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccc
Confidence                        23456789999999999999998887654332  2222222221 1112222111100   0      


Q ss_pred             --------cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchhHHhh
Q 039267          444 --------FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAAAVLS  496 (502)
Q Consensus       444 --------~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~~~~~  496 (502)
                              .......+.++.+|+.+||+   .||++|||++|+++||||++....+....+
T Consensus       252 ~~~~~~~~~~~~~~~~~~l~~li~~~L~---~dP~~Rpt~~e~l~hp~f~~~~~~~~~~~~  309 (317)
T 2pmi_A          252 RDLRQVLQPHTKEPLDGNLMDFLHGLLQ---LNPDMRLSAKQALHHPWFAEYYHHASMGGS  309 (317)
T ss_dssp             CCSHHHHGGGCSSCCCHHHHHHHHHHSC---SSGGGSCCHHHHTTSGGGGGGCC-------
T ss_pred             hhHHHhhcccccccCCHHHHHHHHHHCC---CCcccCCCHHHHhCChhhhcccchhhcccc
Confidence                    01123568899999999999   777999999999999999987776655444


No 31 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.8e-45  Score=380.60  Aligned_cols=276  Identities=20%  Similarity=0.304  Sum_probs=194.2

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||+||+|.+..+|+.||||++.....                         ..........+. ..
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-------------------------~~~~~~~~~~E~-~~   61 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-------------------------NSTDAQRTFREI-MI   61 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--C-------------------------CHHHHHHHHHHH-HH
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc-------------------------ChHHHHHHHHHH-HH
Confidence            3579999999999999999999998999999988754211                         001111111111 22


Q ss_pred             hhhcC-CccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          216 LSRAA-PETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       216 l~~~~-h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      +..+. |+||+++++++..+.      ....++||||++ |+|.+++...                     .+++..+..
T Consensus        62 l~~l~~h~niv~l~~~~~~~~------~~~~~lv~e~~~-~~L~~~~~~~---------------------~~~~~~~~~  113 (388)
T 3oz6_A           62 LTELSGHENIVNLLNVLRADN------DRDVYLVFDYME-TDLHAVIRAN---------------------ILEPVHKQY  113 (388)
T ss_dssp             HHHTTTCTTBCCEEEEEECTT------SSCEEEEEECCS-EEHHHHHHHT---------------------CCCHHHHHH
T ss_pred             HHhccCCCCCCeeeeEEecCC------CCEEEEEecccC-cCHHHHHHcC---------------------CCCHHHHHH
Confidence            44444 999999999987532      235899999996 7999999864                     478889999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCC--------------------ccCCCcccCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGK--------------------NYVPNRTLLD  354 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~--------------------~~~~~~~~gt  354 (502)
                      ++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|+......                    .......+||
T Consensus       114 i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  193 (388)
T 3oz6_A          114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVAT  193 (388)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCG
T ss_pred             HHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCccc
Confidence            99999999999999999999999999999999999999999998754311                    1122345799


Q ss_pred             CCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhhHHHHHhhccChH
Q 039267          355 PDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNFNMEIKTAQYDLN  432 (502)
Q Consensus       355 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~~~~~~~~~~~~~  432 (502)
                      +.|+|||++.+.                     ..++.++|||||||++|||++|..|+....  ..+..++...+.+..
T Consensus       194 ~~y~aPE~~~~~---------------------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~  252 (388)
T 3oz6_A          194 RWYRAPEILLGS---------------------TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSN  252 (388)
T ss_dssp             GGGCCHHHHTTC---------------------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred             CCcCCHHHhcCC---------------------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence            999999998752                     245567899999999999999987765443  233333333332221


Q ss_pred             H----------------------------------HHHhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHH
Q 039267          433 K----------------------------------WREYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAA  478 (502)
Q Consensus       433 ~----------------------------------~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~ev  478 (502)
                      .                                  |.....   ........++++.+|+.+||+   .||++|||++|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dll~~~L~---~dP~~R~t~~e~  326 (388)
T 3oz6_A          253 EDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLL---KINPKADCNEEALDLLDKLLQ---FNPNKRISANDA  326 (388)
T ss_dssp             HHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHH---HHCTTCCCCHHHHHHHHHHCC---SSGGGSCCHHHH
T ss_pred             HHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcc---cccccccCCHHHHHHHHHhhc---cCcccCCCHHHH
Confidence            1                                  111000   001123578999999999999   777999999999


Q ss_pred             hcCCccccCCCchh
Q 039267          479 LRHPYFLLGGDQAA  492 (502)
Q Consensus       479 l~HP~f~~~~~~~~  492 (502)
                      |+||||+...+...
T Consensus       327 l~Hp~~~~~~~~~~  340 (388)
T 3oz6_A          327 LKHPFVSIFHNPNE  340 (388)
T ss_dssp             TTSTTTTTTCCGGG
T ss_pred             hCCHHHHHhcCCcc
Confidence            99999987655443


No 32 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.5e-44  Score=362.62  Aligned_cols=257  Identities=20%  Similarity=0.224  Sum_probs=195.6

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.++||+|+||+||+|++..+|+.||||++.....                         .............
T Consensus        54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~~~~e~~  108 (311)
T 3p1a_A           54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-------------------------GPKDRARKLAEVG  108 (311)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-------------------------SHHHHHHHHHHHH
T ss_pred             hhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-------------------------ChHHHHHHHHHHH
Confidence            344679999999999999999999988899999987654221                         0111111222222


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      .......|+||++++++|..        .+..+|||||+ +++|.+++...+                   ..+++..++
T Consensus       109 ~~~~~~~h~~iv~l~~~~~~--------~~~~~lv~e~~-~~~L~~~~~~~~-------------------~~l~~~~~~  160 (311)
T 3p1a_A          109 SHEKVGQHPCCVRLEQAWEE--------GGILYLQTELC-GPSLQQHCEAWG-------------------ASLPEAQVW  160 (311)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--------TTEEEEEEECC-CCBHHHHHHHHC-------------------SCCCHHHHH
T ss_pred             HHHHhcCCCcEEEEEEEEEe--------CCEEEEEEecc-CCCHHHHHHhcC-------------------CCCCHHHHH
Confidence            33344489999999999875        34699999999 789999998753                   258999999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+        
T Consensus       161 ~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--------  230 (311)
T 3p1a_A          161 GYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG--AGEVQEGDPRYMAPELLQG--------  230 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--------CCCCCGGGCCGGGGGT--------
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC--CCcccCCCccccCHhHhcC--------
Confidence            999999999999999999999999999999999999999999998765432  2345568999999998864        


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                     .++.++|||||||++|||++|..++.... .... +...             ..........+++
T Consensus       231 ---------------~~~~~~DiwslG~il~el~~g~~~~~~~~-~~~~-~~~~-------------~~~~~~~~~~~~~  280 (311)
T 3p1a_A          231 ---------------SYGTAADVFSLGLTILEVACNMELPHGGE-GWQQ-LRQG-------------YLPPEFTAGLSSE  280 (311)
T ss_dssp             ---------------CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-HHHH-HTTT-------------CCCHHHHTTSCHH
T ss_pred             ---------------CCCchhhHHHHHHHHHHHHhCCCCCCCcc-HHHH-Hhcc-------------CCCcccccCCCHH
Confidence                           24457899999999999999865544322 1111 1111             1111223457899


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      +.+|+.+||+   .||++|||++|+++||||++
T Consensus       281 l~~li~~~L~---~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          281 LRSVLVMMLE---PDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHHSC---SSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHcC---CChhhCcCHHHHHhCccccC
Confidence            9999999999   77799999999999999985


No 33 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=8.2e-45  Score=382.81  Aligned_cols=263  Identities=19%  Similarity=0.197  Sum_probs=202.5

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|++.+.||+|+||.||+|+...+|+.||+|+++...... ......+..|..++                   
T Consensus       143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l-------------------  202 (446)
T 4ejn_A          143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDEVAHTLTENRVL-------------------  202 (446)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CC-------------------
T ss_pred             cCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh-hHHHHHHHHHHHHH-------------------
Confidence            3466788999999999999999999999999999999998632110 01111222333333                   


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                           ..+.||||++++++|...        +..+|||||+++|+|.+++...+                    .+++..
T Consensus       203 -----~~l~h~~iv~l~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~  249 (446)
T 4ejn_A          203 -----QNSRHPFLTALKYSFQTH--------DRLCFVMEYANGGELFFHLSRER--------------------VFSEDR  249 (446)
T ss_dssp             -----CCCSCTTSCCEEEEEEET--------TEEEEEECCCSSCBHHHHHHHHS--------------------CCCHHH
T ss_pred             -----HhCCCCeEeeEEEEEeeC--------CEEEEEEeeCCCCcHHHHHHhcC--------------------CCCHHH
Confidence                 344599999999998763        46999999999999999998764                    578999


Q ss_pred             HHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          292 IKQILRQIITSLKKIHD-TGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~-~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      ++.++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+|+....... ......||+.|+|||++.+..   
T Consensus       250 ~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---  325 (446)
T 4ejn_A          250 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEVLEDND---  325 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------CCSSSCGGGCCHHHHHTSC---
T ss_pred             HHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc-ccccccCCccccCHhhcCCCC---
Confidence            99999999999999998 8999999999999999999999999999986443322 334578999999999997643   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                         ++.++|||||||++|||++|..|+.............              ......+...
T Consensus       326 -------------------~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~--------------~~~~~~p~~~  372 (446)
T 4ejn_A          326 -------------------YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--------------MEEIRFPRTL  372 (446)
T ss_dssp             -------------------CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--------------HCCCCCCTTS
T ss_pred             -------------------CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH--------------hCCCCCCccC
Confidence                               4567799999999999999999986543321111100              0122234557


Q ss_pred             chHHHHHHHHhhhccCCCCCCCc-----CHHHHhcCCccccC
Q 039267          451 SGRGWDLATKLISERGFLRRGRL-----SAAAALRHPYFLLG  487 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rp-----s~~evl~HP~f~~~  487 (502)
                      ++++.+||.+||+   .||.+||     |++|+++||||+..
T Consensus       373 ~~~~~~li~~~L~---~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          373 GPEAKSLLSGLLK---KDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             CHHHHHHHHHHTC---SSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcc---cCHHHhCCCCCCCHHHHHhCccccCC
Confidence            8999999999999   7779999     99999999999954


No 34 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.2e-45  Score=384.95  Aligned_cols=269  Identities=19%  Similarity=0.205  Sum_probs=207.7

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|.+.+.||+|+||+||+|++..+++.||+|++++....          .+              .....+ ..
T Consensus        64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~----------~~--------------~~~~~~-~~  118 (410)
T 3v8s_A           64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI----------KR--------------SDSAFF-WE  118 (410)
T ss_dssp             HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----------HT--------------CCCSTH-HH
T ss_pred             cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh----------hh--------------HHHHHH-HH
Confidence            346778999999999999999999999999999999998752110          00              000001 11


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      +...+..+.||||++++++|..        .+..+|||||+++|+|.+++...                     .+++..
T Consensus       119 E~~il~~l~hp~Iv~l~~~~~~--------~~~~~lV~E~~~gg~L~~~l~~~---------------------~~~e~~  169 (410)
T 3v8s_A          119 ERDIMAFANSPWVVQLFYAFQD--------DRYLYMVMEYMPGGDLVNLMSNY---------------------DVPEKW  169 (410)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEC--------SSEEEEEECCCTTEEHHHHHHHC---------------------CCCHHH
T ss_pred             HHHHHHhCCCCCCCeEEEEEEE--------CCEEEEEEeCCCCCcHHHHHHcC---------------------CCCHHH
Confidence            1123556689999999999875        34699999999999999999764                     378889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.............+||+.|+|||++.+....  
T Consensus       170 ~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~--  247 (410)
T 3v8s_A          170 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD--  247 (410)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTT--
T ss_pred             HHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCC--
Confidence            999999999999999999999999999999999999999999999988765544344567899999999999753311  


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHHhhccChHHHHHhhhccCccccccC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                      ..++.++|||||||++|||++|..|+.......  ..+...        .    ....++....
T Consensus       248 ----------------~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--------~----~~~~~p~~~~  299 (410)
T 3v8s_A          248 ----------------GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH--------K----NSLTFPDDND  299 (410)
T ss_dssp             ----------------CEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH--------H----HHCCCCTTCC
T ss_pred             ----------------cCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc--------c----ccccCCCccc
Confidence                            124567899999999999999999986543221  111110        0    0012223345


Q ss_pred             CchHHHHHHHHhhhccCCCCCC--CcCHHHHhcCCccccC
Q 039267          450 DSGRGWDLATKLISERGFLRRG--RLSAAAALRHPYFLLG  487 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~--Rps~~evl~HP~f~~~  487 (502)
                      .+.++++||.+||+   .+|.+  ||+++||++||||+..
T Consensus       300 ~s~~~~~li~~lL~---~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          300 ISKEAKNLICAFLT---DREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             CCHHHHHHHHHHSS---CGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             ccHHHHHHHHHHcc---ChhhhCCCCCHHHHhcCccccCC
Confidence            79999999999999   55688  9999999999999854


No 35 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=5.3e-45  Score=385.34  Aligned_cols=282  Identities=20%  Similarity=0.263  Sum_probs=190.5

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||+||+|++..+|+.||||++.....  .                       ......+.. +...
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~-----------------------~~~~~~~~~-E~~~  105 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE--D-----------------------LIDCKRILR-EIAI  105 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTS--S-----------------------HHHHHHHHH-HHHH
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc--C-----------------------HHHHHHHHH-HHHH
Confidence            3679999999999999999999988999999998764211  0                       000011111 1223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|+||+++++++.....   ...+..++||||+ +|+|.+++...+                    .+++..++.+
T Consensus       106 l~~l~h~niv~l~~~~~~~~~---~~~~~~~lv~e~~-~~~L~~~~~~~~--------------------~l~~~~~~~~  161 (458)
T 3rp9_A          106 LNRLNHDHVVKVLDIVIPKDV---EKFDELYVVLEIA-DSDFKKLFRTPV--------------------YLTELHIKTL  161 (458)
T ss_dssp             HHHCCCTTBCCEEEECCCSCT---TTCCCEEEEECCC-SEEHHHHHHSSC--------------------CCCHHHHHHH
T ss_pred             HHhCCCCCCCceEEEEecCCc---ccCceEEEEEecc-ccchhhhcccCC--------------------CCCHHHHHHH
Confidence            556679999999999865432   1234699999998 689999998653                    5889999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc--------------------------cCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN--------------------------YVPN  349 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~--------------------------~~~~  349 (502)
                      +.||+.||+|||+.+|+||||||+||||+.++.+||+|||+|+.......                          ....
T Consensus       162 ~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (458)
T 3rp9_A          162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLT  241 (458)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC------------------------
T ss_pred             HHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCcccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999987643221                          1223


Q ss_pred             cccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhC-----------CCCCCCc--
Q 039267          350 RTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIP-----------TLRSISG--  416 (502)
Q Consensus       350 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg-----------~~p~~~~--  416 (502)
                      ..+||+.|+|||++...                     ..++.++|||||||+||||++|           ..++...  
T Consensus       242 ~~~gt~~Y~aPE~~~~~---------------------~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~  300 (458)
T 3rp9_A          242 GHVVTRWYRAPELILLQ---------------------ENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSC  300 (458)
T ss_dssp             ---CCCTTCCHHHHTTC---------------------CCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC----
T ss_pred             CCcccccccChHHhhCC---------------------CCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcc
Confidence            45789999999987532                     3466788999999999999984           2222111  


Q ss_pred             --------------------chhhHHHHHhhccChHH-H--------HHhhhcc------CccccccCCchHHHHHHHHh
Q 039267          417 --------------------LKNFNMEIKTAQYDLNK-W--------REYTRLR------SDFTILDLDSGRGWDLATKL  461 (502)
Q Consensus       417 --------------------~~~~~~~~~~~~~~~~~-~--------~~~~~~~------~~~~~~~~~s~~~~~Li~~~  461 (502)
                                          ...+..+....+..... +        .......      .....++..+.++.+||.+|
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~m  380 (458)
T 3rp9_A          301 FPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRM  380 (458)
T ss_dssp             ----------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHH
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHH
Confidence                                11122222222222111 1        1111100      01123455689999999999


Q ss_pred             hhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          462 ISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       462 L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      |+   .||++|||++|+|+||||+......
T Consensus       381 L~---~dP~~R~t~~e~L~Hp~f~~~~~~~  407 (458)
T 3rp9_A          381 LV---FNPNKRITINECLAHPFFKEVRIAE  407 (458)
T ss_dssp             SC---SSTTTSCCHHHHHHSGGGTTTCCGG
T ss_pred             hc---cCccccCCHHHHhcCHhhhhcCCCc
Confidence            99   7779999999999999999765544


No 36 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=5.8e-45  Score=365.75  Aligned_cols=276  Identities=21%  Similarity=0.287  Sum_probs=201.0

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      -.++|++.+.||+|+||+||+|++ .+|+.||+|++......                         ........ .+..
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~-~E~~   71 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAED-------------------------EGIPSTAI-REIS   71 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEE-TTSCEEEEEEEC-------------------------------CHHHHHH-HHHH
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEE-CCCCEEEEEEEeccccc-------------------------chhhHHHH-HHHH
Confidence            446899999999999999999998 45888888887642210                         00001111 1223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++...        +..++||||++ |+|.+++...+                   ..+++..++.
T Consensus        72 ~l~~l~hp~iv~~~~~~~~~--------~~~~lv~e~~~-~~l~~~~~~~~-------------------~~~~~~~~~~  123 (311)
T 3niz_A           72 LLKELHHPNIVSLIDVIHSE--------RCLTLVFEFME-KDLKKVLDENK-------------------TGLQDSQIKI  123 (311)
T ss_dssp             HHHHCCCTTBCCEEEEECCS--------SCEEEEEECCS-EEHHHHHHTCT-------------------TCCCHHHHHH
T ss_pred             HHHHcCCCCEeeeeeEEccC--------CEEEEEEcCCC-CCHHHHHHhcc-------------------CCCCHHHHHH
Confidence            35666899999999998653        46999999996 69999987653                   2478999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.        
T Consensus       124 ~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~--------  194 (311)
T 3niz_A          124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGS--------  194 (311)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC----CCCCCCTTCCHHHHTTC--------
T ss_pred             HHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-cccCCcccCCcCCHHHhcCC--------
Confidence            999999999999999999999999999999999999999999987653322 23455789999999998652        


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhhHHHHHhhcc-ChHHHHHhhhc-----------
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNFNMEIKTAQY-DLNKWREYTRL-----------  440 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~-----------  440 (502)
                                   ..++.++|||||||++|||++|..|+....  ..........+. ....|......           
T Consensus       195 -------------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (311)
T 3niz_A          195 -------------KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVF  261 (311)
T ss_dssp             -------------CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCC
T ss_pred             -------------CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccc
Confidence                         234567899999999999999987765433  233333332222 11122111110           


Q ss_pred             --cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          441 --RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       441 --~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                        .+.....+..+.++.+|+.+||+   .||++|||++|+++||||++...+
T Consensus       262 ~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~f~~~~~~  310 (311)
T 3niz_A          262 EKKPWSSIIPGFCQEGIDLLSNMLC---FDPNKRISARDAMNHPYFKDLDPQ  310 (311)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHSC---SCTTTSCCHHHHHTSGGGTTSCTT
T ss_pred             cCCcHHHhCcccCHHHHHHHHHHcC---CChhHCCCHHHHhcCcccccCCcc
Confidence              00011334578899999999999   788999999999999999976543


No 37 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=7.6e-45  Score=360.19  Aligned_cols=271  Identities=20%  Similarity=0.291  Sum_probs=196.6

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||+||+|+. .+|+.||+|.+......                         ........ .+...+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~-------------------------~~~~~~~~-~E~~~l   54 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED-------------------------EGIPSTTI-REISIL   54 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGG-------------------------GCCCHHHH-HHHHGG
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccc-------------------------cccchhHH-HHHHHH
Confidence            5799999999999999999998 67888999887653210                         00001111 112335


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++...        +..++||||++ ++|.+++....                   ..+++..++.++
T Consensus        55 ~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~-~~l~~~~~~~~-------------------~~~~~~~~~~~~  106 (288)
T 1ob3_A           55 KELKHSNIVKLYDVIHTK--------KRLVLVFEHLD-QDLKKLLDVCE-------------------GGLESVTAKSFL  106 (288)
T ss_dssp             GGCCCTTBCCEEEEEECS--------SCEEEEEECCS-EEHHHHHHTST-------------------TCCCHHHHHHHH
T ss_pred             HhcCCCCEeeeeeEEccC--------CeEEEEEEecC-CCHHHHHHhcc-------------------cCCCHHHHHHHH
Confidence            666799999999998653        46999999996 59999998642                   257888999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.          
T Consensus       107 ~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~----------  175 (288)
T 1ob3_A          107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYTHEIVTLWYRAPDVLMGS----------  175 (288)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTC----------
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-ccccccccccccCchheeCC----------
Confidence            9999999999999999999999999999999999999999987643321 22345789999999998642          


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhc-cChHHHHHhhhc---cCcc------
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQ-YDLNKWREYTRL---RSDF------  444 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~---~~~~------  444 (502)
                                 ..++.++|||||||++|||++|..|+......  ........+ .....|......   .+.+      
T Consensus       176 -----------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (288)
T 1ob3_A          176 -----------KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL  244 (288)
T ss_dssp             -----------CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCC
T ss_pred             -----------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCc
Confidence                       23456789999999999999998887544322  222222211 112222222111   0111      


Q ss_pred             ---ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          445 ---TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       445 ---~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                         ......++++.+|+.+||+   .||++|||++|+++||||+..
T Consensus       245 ~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          245 PWESFLKGLDESGIDLLSKMLK---LDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             CGGGTCCSCCHHHHHHHHHHTC---SSTTTSCCHHHHHTSGGGGC-
T ss_pred             cHHHHhhhcCHHHHHHHHHHcC---CCcccCCCHHHHhcCcchhhc
Confidence               1234578999999999999   777999999999999999864


No 38 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=4.8e-45  Score=368.07  Aligned_cols=258  Identities=21%  Similarity=0.235  Sum_probs=202.8

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||.||+|+...+|+.||+|++++....           +             ...... ...+.
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------~-------------~~~~~~-~~~E~   57 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-----------R-------------LKQVEH-TNDER   57 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-----------H-------------TTCHHH-HHHHH
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----------h-------------hhHHHH-HHHHH
Confidence            3457899999999999999999999989999999998752110           0             000001 11122


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++
T Consensus        58 ~~l~~l~hp~Iv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~--------------------~~~~~~~~  109 (318)
T 1fot_A           58 LMLSIVTHPFIIRMWGTFQD--------AQQIFMIMDYIEGGELFSLLRKSQ--------------------RFPNPVAK  109 (318)
T ss_dssp             HHHHSCCBTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHTS--------------------SCCHHHHH
T ss_pred             HHHhhCCCCCCceEeEEEEe--------CCEEEEEEeCCCCCCHHHHHHHcC--------------------CCCHHHHH
Confidence            34566789999999999865        346999999999999999998754                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....    .....||+.|+|||++.+..      
T Consensus       110 ~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~------  179 (318)
T 1fot_A          110 FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----TYTLCGTPDYIAPEVVSTKP------  179 (318)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC----BCCCCSCTTTCCHHHHTTCC------
T ss_pred             HHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc----cccccCCccccCHhHhcCCC------
Confidence            99999999999999999999999999999999999999999999875432    23567999999999987643      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                      ++.++|||||||++|||++|..|+.........            .....  .....+...+.+
T Consensus       180 ----------------~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------------~~i~~--~~~~~p~~~~~~  229 (318)
T 1fot_A          180 ----------------YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY------------EKILN--AELRFPPFFNED  229 (318)
T ss_dssp             ----------------BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------------HHHHH--CCCCCCTTSCHH
T ss_pred             ----------------CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH------------HHHHh--CCCCCCCCCCHH
Confidence                            445679999999999999999987654321111            00111  112334567899


Q ss_pred             HHHHHHHhhhccCCCCCCCc-----CHHHHhcCCccccC
Q 039267          454 GWDLATKLISERGFLRRGRL-----SAAAALRHPYFLLG  487 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rp-----s~~evl~HP~f~~~  487 (502)
                      +.+|+.+||+   .||.+||     +++++++||||+..
T Consensus       230 ~~~li~~lL~---~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          230 VKDLLSRLIT---RDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             HHHHHHHHTC---SCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHHHHHHhc---cCHHHcCCCcCCCHHHHhcCccccCC
Confidence            9999999999   6779999     99999999999853


No 39 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.1e-44  Score=366.37  Aligned_cols=264  Identities=19%  Similarity=0.256  Sum_probs=197.5

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEe---cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIV---PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~---~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      ..+..++|++.+.||+|+||.||+|+..   .+|+.||+|++++..............                      
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~----------------------   69 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK----------------------   69 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC-----------------------------------
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHH----------------------
Confidence            3466788999999999999999999985   578899999887632110000000000                      


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                        .+...+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .++
T Consensus        70 --~E~~~l~~l~hp~iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~  119 (327)
T 3a62_A           70 --AERNILEEVKHPFIVDLIYAFQT--------GGKLYLILEYLSGGELFMQLEREG--------------------IFM  119 (327)
T ss_dssp             ---HHHHHHHCCCTTBCCEEEEEEC--------SSCEEEEEECCTTEEHHHHHHHHS--------------------SCC
T ss_pred             --HHHHHHHhCCCCCccceeEEEEc--------CCEEEEEEeCCCCCcHHHHHHhCC--------------------CCC
Confidence              11123556679999999999865        346999999999999999998754                    578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      +..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.. 
T Consensus       120 ~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-  197 (327)
T 3a62_A          120 EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEILMRSG-  197 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-----------CTTSSCCTTSCHHHHTTSC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCc-cccccCCCcCccCHhhCcCCC-
Confidence            889999999999999999999999999999999999999999999999986443322 234567999999999997543 


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                           ++.++|||||||++|||++|..|+..........            ....  .....++
T Consensus       198 ---------------------~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~------------~i~~--~~~~~p~  242 (327)
T 3a62_A          198 ---------------------HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID------------KILK--CKLNLPP  242 (327)
T ss_dssp             ---------------------CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH------------HHHH--TCCCCCT
T ss_pred             ---------------------CCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHH------------HHHh--CCCCCCC
Confidence                                 4457799999999999999999876543221110            0100  1123345


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCc-----CHHHHhcCCccccC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRL-----SAAAALRHPYFLLG  487 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rp-----s~~evl~HP~f~~~  487 (502)
                      ..+.++.+|+.+||+   .||.+||     +++++++||||+..
T Consensus       243 ~~~~~~~~li~~~L~---~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          243 YLTQEARDLLKKLLK---RNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             TSCHHHHHHHHHHSC---SCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             CCCHHHHHHHHHHHh---cCHhhccCCCCCCHHHHHcCCcccCC
Confidence            678999999999999   7779999     89999999999854


No 40 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=2.9e-44  Score=370.23  Aligned_cols=262  Identities=21%  Similarity=0.203  Sum_probs=202.9

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|++.+.||+|+||.||+|+...+++.||+|++++...... ........|..+                     
T Consensus        34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-~~~~~~~~e~~~---------------------   91 (373)
T 2r5t_A           34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK-KEEKHIMSERNV---------------------   91 (373)
T ss_dssp             TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------C---------------------
T ss_pred             CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-HHHHHHHHHHHH---------------------
Confidence            4667899999999999999999999999999999999987432110 000111111111                     


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                        .+..+.||||++++++|..        .+..++||||+++|+|.+++...+                    .+++..+
T Consensus        92 --ll~~~~hp~Iv~l~~~~~~--------~~~~~lv~E~~~gg~L~~~l~~~~--------------------~~~~~~~  141 (373)
T 2r5t_A           92 --LLKNVKHPFLVGLHFSFQT--------ADKLYFVLDYINGGELFYHLQRER--------------------CFLEPRA  141 (373)
T ss_dssp             --CBCCCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHS--------------------SCCHHHH
T ss_pred             --HHHhCCCCCCCCEEEEEEe--------CCEEEEEEeCCCCCcHHHHHHhcC--------------------CCCHHHH
Confidence              1334569999999999875        346999999999999999998754                    5788899


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+.      
T Consensus       142 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------  214 (373)
T 2r5t_A          142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-STTSTFCGTPEYLAPEVLHKQ------  214 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-CCCCSBSCCCCCCCHHHHTTC------
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC-CccccccCCccccCHHHhCCC------
Confidence            9999999999999999999999999999999999999999999998643322 234567899999999999753      


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                      .++.++|||||||++|||++|..|+.........            ..+..  .........+.
T Consensus       215 ----------------~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~------------~~i~~--~~~~~~~~~~~  264 (373)
T 2r5t_A          215 ----------------PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY------------DNILN--KPLQLKPNITN  264 (373)
T ss_dssp             ----------------CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH------------HHHHH--SCCCCCSSSCH
T ss_pred             ----------------CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH------------HHHHh--cccCCCCCCCH
Confidence                            3456789999999999999999987654322111            01111  12233456799


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCH----HHHhcCCcccc
Q 039267          453 RGWDLATKLISERGFLRRGRLSA----AAALRHPYFLL  486 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~----~evl~HP~f~~  486 (502)
                      ++++|+.+||+   .||.+||++    +++++||||+.
T Consensus       265 ~~~~li~~lL~---~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          265 SARHLLEGLLQ---KDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             HHHHHHHHHTC---SSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHHcc---cCHHhCCCCCCCHHHHhCCccccC
Confidence            99999999999   666999996    79999999984


No 41 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=3.1e-44  Score=366.14  Aligned_cols=271  Identities=18%  Similarity=0.171  Sum_probs=202.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||.||+|++..+|+.||+|++++.....                        .........+..
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------~~~~~~~~~E~~   61 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND------------------------DEDIDWVQTEKH   61 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS------------------------HHHHHHHHHHHH
T ss_pred             CchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc------------------------hHHHHHHHHHHH
Confidence            55678999999999999999999999899999999887632210                        001111111111


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      .......||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++
T Consensus        62 ~l~~~~~hp~iv~l~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~--------------------~l~~~~~~  113 (345)
T 3a8x_A           62 VFEQASNHPFLVGLHSCFQT--------ESRLFFVIEYVNGGDLMFHMQRQR--------------------KLPEEHAR  113 (345)
T ss_dssp             HHHHTTTCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHHS--------------------SCCHHHHH
T ss_pred             HHHhcCCCCccCeEEEEEEe--------CCEEEEEEeCCCCCcHHHHHHHcC--------------------CCCHHHHH
Confidence            21222379999999999865        346999999999999999998754                    58899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+..      
T Consensus       114 ~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~------  186 (345)
T 3a8x_A          114 FYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRGED------  186 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-CCBCCCCSCGGGCCHHHHTTCC------
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC-CcccccCCCccccCccccCCCC------
Confidence            999999999999999999999999999999999999999999998643222 1334568999999999997633      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                      ++.++|||||||++|||++|..|+..............   ...+....  ......+...+.+
T Consensus       187 ----------------~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~~~i~--~~~~~~p~~~s~~  245 (345)
T 3a8x_A          187 ----------------YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE---DYLFQVIL--EKQIRIPRSLSVK  245 (345)
T ss_dssp             ----------------BCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CH---HHHHHHHH--HCCCCCCTTSCHH
T ss_pred             ----------------CChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccH---HHHHHHHH--cCCCCCCCCCCHH
Confidence                            44678999999999999999988753211100000000   00011111  1223345568999


Q ss_pred             HHHHHHHhhhccCCCCCCCcCH------HHHhcCCccccC
Q 039267          454 GWDLATKLISERGFLRRGRLSA------AAALRHPYFLLG  487 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~------~evl~HP~f~~~  487 (502)
                      +.+|+.+||+   .||.+||++      +++++||||+..
T Consensus       246 ~~~li~~lL~---~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          246 AASVLKSFLN---KDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             HHHHHHHHTC---SSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHhc---CCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            9999999999   777999995      899999999853


No 42 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=1.1e-44  Score=369.50  Aligned_cols=263  Identities=23%  Similarity=0.243  Sum_probs=201.6

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+.+.||+|+||.||+|++..+|+.||+|++++....          .              .........+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~----------~--------------~~~~~~~~~E~   68 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL----------M--------------DDDVECTMVEK   68 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH----------H--------------TTCHHHHHHHH
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh----------h--------------hhhHHHHHHHH
Confidence            46678999999999999999999999999999999988762100          0              00001111111


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ........||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..+
T Consensus        69 ~il~~~~~hp~iv~l~~~~~~--------~~~~~lv~E~~~gg~L~~~l~~~~--------------------~~~~~~~  120 (345)
T 1xjd_A           69 RVLSLAWEHPFLTHMFCTFQT--------KENLFFVMEYLNGGDLMYHIQSCH--------------------KFDLSRA  120 (345)
T ss_dssp             HHHHHHTTCTTBCCEEEEEEC--------SSEEEEEEECCTTCBHHHHHHHHS--------------------SCCHHHH
T ss_pred             HHHHhcCCCCCCCcEEEEEEe--------CCEEEEEEeCCCCCcHHHHHHHcC--------------------CCCHHHH
Confidence            121223479999999999865        346999999999999999998754                    5789999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .....+||+.|+|||++.+..     
T Consensus       121 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-----  194 (345)
T 1xjd_A          121 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA-KTNTFCGTPDYIAPEILLGQK-----  194 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCC-----
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC-cccCCCCCcccCChhhhcCCC-----
Confidence            99999999999999999999999999999999999999999999986533222 345668999999999997643     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                       ++.++|||||||++|||++|..|+........  ..          .+..  .....+...+.
T Consensus       195 -----------------~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~----------~i~~--~~~~~p~~~s~  243 (345)
T 1xjd_A          195 -----------------YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--FH----------SIRM--DNPFYPRWLEK  243 (345)
T ss_dssp             -----------------BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HH----------HHHH--CCCCCCTTSCH
T ss_pred             -----------------CCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH--HH----------HHHh--CCCCCCcccCH
Confidence                             44677999999999999999988765432211  11          0111  11123345789


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHH-HHhcCCccccC
Q 039267          453 RGWDLATKLISERGFLRRGRLSAA-AALRHPYFLLG  487 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~-evl~HP~f~~~  487 (502)
                      ++.+|+.+||+   .||++||++. ++++||||+..
T Consensus       244 ~~~~li~~lL~---~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          244 EAKDLLVKLFV---REPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HHHHHHHHHSC---SSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHHHHHHHhc---CCHhHcCCChHHHHcCccccCC
Confidence            99999999999   6779999998 99999999854


No 43 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.5e-44  Score=365.33  Aligned_cols=266  Identities=20%  Similarity=0.294  Sum_probs=204.3

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|+...+|+.||+|++.........        .             ......+. .+...
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------~-------------~~~~~~~~-~E~~~   67 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--------R-------------GVSREDIE-REVSI   67 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS--------S-------------SBCHHHHH-HHHHH
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc--------c-------------hhhHHHHH-HHHHH
Confidence            35699999999999999999999999999999998864321100        0             00001111 12233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++.+
T Consensus        68 l~~l~hp~iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~i  119 (326)
T 2y0a_A           68 LKEIQHPNVITLHEVYEN--------KTDVILILELVAGGELFDFLAEKE--------------------SLTEEEATEF  119 (326)
T ss_dssp             HHHCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHTTSS--------------------CCBHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEe--------CCEEEEEEEcCCCCCHHHHHHhcC--------------------CcCHHHHHHH
Confidence            566679999999999865        346999999999999999997653                    5789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRG----QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~----~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      +.||+.||+|||+++|+||||||+|||++.++    .+||+|||+++......  ......||+.|+|||++.+..    
T Consensus       120 ~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----  193 (326)
T 2y0a_A          120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEP----  193 (326)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCC----
T ss_pred             HHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC--ccccccCCcCcCCceeecCCC----
Confidence            99999999999999999999999999999887    89999999998765433  234567999999999986533    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                        ++.++|||||||++|||++|..|+........ ..+.......           ....+...
T Consensus       194 ------------------~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  244 (326)
T 2y0a_A          194 ------------------LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-----------EDEYFSNT  244 (326)
T ss_dssp             ------------------CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC-----------CHHHHTTS
T ss_pred             ------------------CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc-----------CccccccC
Confidence                              44577999999999999999998755432211 1111111111           11123456


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      +..+.+|+.+||+   .||++|||++++++||||+....
T Consensus       245 ~~~~~~li~~~L~---~dP~~Rpt~~e~l~hp~~~~~~~  280 (326)
T 2y0a_A          245 SALAKDFIRRLLV---KDPKKRMTIQDSLQHPWIKPKDT  280 (326)
T ss_dssp             CHHHHHHHHHHSC---SSGGGSCCHHHHHHSTTTSCCSH
T ss_pred             CHHHHHHHHHHcc---CChhhCCCHHHHhcCCCccCCcc
Confidence            8899999999999   77799999999999999996554


No 44 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=4.9e-45  Score=377.27  Aligned_cols=268  Identities=17%  Similarity=0.176  Sum_probs=207.6

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|.+.+.||+|+||.||+|+...+++.||+|++.+....          .              ......+.. 
T Consensus        10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~----------~--------------~~~~~~~~~-   64 (384)
T 4fr4_A           10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV----------E--------------RNEVRNVFK-   64 (384)
T ss_dssp             CCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH----------H--------------TTCHHHHHH-
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc----------c--------------HHHHHHHHH-
Confidence            456778999999999999999999999999999999988753210          0              000011111 


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ....+..+.||||++++++|...        +..++||||+++|+|.+++...+                    .+++..
T Consensus        65 E~~il~~l~hp~Iv~l~~~~~~~--------~~~~lv~e~~~gg~L~~~l~~~~--------------------~l~~~~  116 (384)
T 4fr4_A           65 ELQIMQGLEHPFLVNLWYSFQDE--------EDMFMVVDLLLGGDLRYHLQQNV--------------------HFKEET  116 (384)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEECS--------SEEEEEECCCTTEEHHHHHHTTC--------------------CCCHHH
T ss_pred             HHHHHHhCCCCCCCcEEEEEEeC--------CEEEEEEecCCCCcHHHHHHhcC--------------------CCCHHH
Confidence            12235566899999999998753        46999999999999999998653                    588999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.....   
T Consensus       117 ~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~---  191 (384)
T 4fr4_A          117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--QITTMAGTKPYMAPEMFSSRKG---  191 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC--CBCCCCSCGGGCCGGGTCCCSS---
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC--ceeccCCCccccCCeeeccCCC---
Confidence            99999999999999999999999999999999999999999999998765433  3356689999999999874221   


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                      ..++.++|||||||++|||++|..|+.............         ...  ......+...+
T Consensus       192 ----------------~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~---------~~~--~~~~~~p~~~s  244 (384)
T 4fr4_A          192 ----------------AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH---------TFE--TTVVTYPSAWS  244 (384)
T ss_dssp             ----------------CCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH---------HHH--HCCCCCCTTSC
T ss_pred             ----------------CCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH---------HHh--hcccCCCCcCC
Confidence                            235567899999999999999999876433221111110         000  11223445678


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcC-HHHHhcCCccccC
Q 039267          452 GRGWDLATKLISERGFLRRGRLS-AAAALRHPYFLLG  487 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps-~~evl~HP~f~~~  487 (502)
                      .++.+||.+||+   .||.+||+ ++++++||||...
T Consensus       245 ~~~~~li~~lL~---~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          245 QEMVSLLKKLLE---PNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             HHHHHHHHHHSC---SSGGGSCCSHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhc---CCHhHhcccHHHHHcChhhhcC
Confidence            999999999999   77799999 9999999999854


No 45 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=4.9e-45  Score=368.45  Aligned_cols=261  Identities=20%  Similarity=0.254  Sum_probs=202.2

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||+||+|++..+++.||+|++.......             ..+             .+. .+...+
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------~~~-------------~~~-~E~~~l   59 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-------------CPE-------------NIK-KEICIN   59 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------------------------------CHH-HHHHHH
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc-------------hHH-------------HHH-HHHHHH
Confidence            57999999999999999999998899999999886532100             000             011 111235


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.|+||+++++++..        .+..++||||+++|+|.+++....                    .+++..++.++
T Consensus        60 ~~l~hpnIv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~i~  111 (323)
T 3tki_A           60 KMLNHENVVKFYGHRRE--------GNIQYLFLEYCSGGELFDRIEPDI--------------------GMPEPDAQRFF  111 (323)
T ss_dssp             HHCCCTTBCCEEEEEEC--------SSEEEEEEECCTTEEGGGGSBTTT--------------------BCCHHHHHHHH
T ss_pred             HhCCCCCCCeEEEEEec--------CCeEEEEEEcCCCCcHHHHHhhcC--------------------CCCHHHHHHHH
Confidence            56679999999998865        345899999999999999987553                    58899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCC-ccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGK-NYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+..+       
T Consensus       112 ~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-------  184 (323)
T 3tki_A          112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF-------  184 (323)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSB-------
T ss_pred             HHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCC-------
Confidence            999999999999999999999999999999999999999998764332 223346689999999999976432       


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                    ++.++|||||||++|||++|..|+............        |   .........+...+.++.
T Consensus       185 --------------~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~  239 (323)
T 3tki_A          185 --------------HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD--------W---KEKKTYLNPWKKIDSAPL  239 (323)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH--------H---HTTCTTSTTGGGSCHHHH
T ss_pred             --------------CCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH--------H---hcccccCCccccCCHHHH
Confidence                          234679999999999999999998654433221111        1   111112223345789999


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      +|+.+||+   .||++|||++|+++||||+..
T Consensus       240 ~li~~~L~---~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          240 ALLHKILV---ENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             HHHHHHSC---SSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHHHcc---CChhhCcCHHHHhhChhhccc
Confidence            99999999   777999999999999999854


No 46 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=3.3e-44  Score=358.78  Aligned_cols=287  Identities=21%  Similarity=0.295  Sum_probs=202.8

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||+||+|++..+|+.||+|++..........                    ........+....
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--------------------~~~~~~~~e~~~l   65 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGG--------------------GLPISTVREVALL   65 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSS--------------------CCCHHHHHHHHHH
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccccccc--------------------ccchhHHHHHHHH
Confidence            44678999999999999999999998899999999887543211000                    0000000111112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++.......   ....++||||++ |+|.+++....                  ...+++..++
T Consensus        66 ~~l~~~~h~niv~~~~~~~~~~~~~---~~~~~lv~e~~~-~~L~~~~~~~~------------------~~~~~~~~~~  123 (308)
T 3g33_A           66 RRLEAFEHPNVVRLMDVCATSRTDR---EIKVTLVFEHVD-QDLRTYLDKAP------------------PPGLPAETIK  123 (308)
T ss_dssp             HHHHHHCCTTBCCEEEEEEECCSSS---EEEEEEEEECCC-CBHHHHHHTCC------------------TTCSCHHHHH
T ss_pred             HHHhhcCCCCeEEeeeeeeccCCCC---ceeEEEEehhhh-cCHHHHHhhcc------------------CCCCCHHHHH
Confidence            2345557999999999987643211   124799999995 79999998763                  1248999999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+..      
T Consensus       124 ~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~------  195 (308)
T 3g33_A          124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQST------  195 (308)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSC------
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCc--ccCCccccccccCchHHcCCC------
Confidence            999999999999999999999999999999999999999999998764332  234567899999999997644      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhccC-hHHHHHhhhc----------
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQYD-LNKWREYTRL----------  440 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~----------  440 (502)
                                      ++.++|||||||++|||++|..|+......  ........+.. ...|......          
T Consensus       196 ----------------~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (308)
T 3g33_A          196 ----------------YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGP  259 (308)
T ss_dssp             ----------------CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCC
T ss_pred             ----------------CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCC
Confidence                            345679999999999999998887554432  22222222211 1112111000          


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      ++.....+..++++.+|+.+||+   .||++|||++|+|+||||+....
T Consensus       260 ~~~~~~~~~~~~~~~~li~~~L~---~dP~~R~t~~e~l~h~~~~~~~~  305 (308)
T 3g33_A          260 RPVQSVVPEMEESGAQLLLEMLT---FNPHKRISAFRALQHSYLHKDEG  305 (308)
T ss_dssp             CCHHHHSCSCCHHHHHHHHHHTC---SSTTTSCCHHHHHTSTTC-----
T ss_pred             CcHHHhCccccHHHHHHHHHHhc---CCCccCCCHHHHhcCccccCCCC
Confidence            00011234578999999999999   77799999999999999996543


No 47 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.9e-44  Score=363.71  Aligned_cols=260  Identities=19%  Similarity=0.217  Sum_probs=202.4

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ..|...+.||+|+||.||+|+...+|+.||||++.......    .+.+                        ..+...+
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~----~~~~------------------------~~E~~~l   96 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR----RELL------------------------FNEVVIM   96 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCS----HHHH------------------------HHHHHHH
T ss_pred             hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhH----HHHH------------------------HHHHHHH
Confidence            34788889999999999999998899999999887532110    0011                        1112335


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.|+||+++++++...        +..++||||+++|+|.+++...                     .+++..+..++
T Consensus        97 ~~l~h~niv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~---------------------~l~~~~~~~i~  147 (321)
T 2c30_A           97 RDYQHFNVVEMYKSYLVG--------EELWVLMEFLQGGALTDIVSQV---------------------RLNEEQIATVC  147 (321)
T ss_dssp             TTCCCTTBCCEEEEEEET--------TEEEEEECCCCSCBHHHHHTTC---------------------CCCHHHHHHHH
T ss_pred             HhCCCCCcceEEEEEEEC--------CEEEEEEecCCCCCHHHHHHhc---------------------CCCHHHHHHHH
Confidence            666799999999998763        3599999999999999998753                     47899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .|++.||+|||+.+|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..         
T Consensus       148 ~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---------  217 (321)
T 2c30_A          148 EAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSL---------  217 (321)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCC---------
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCC---------
Confidence            9999999999999999999999999999999999999999987654322 234567999999999997543         


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHHH
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGWD  456 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  456 (502)
                                   ++.++|||||||++|||++|..|+.............           ....+........++++.+
T Consensus       218 -------------~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~  273 (321)
T 2c30_A          218 -------------YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR-----------DSPPPKLKNSHKVSPVLRD  273 (321)
T ss_dssp             -------------BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-----------HSSCCCCTTGGGSCHHHHH
T ss_pred             -------------CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-----------cCCCCCcCccccCCHHHHH
Confidence                         4457799999999999999999876543221111000           0111222233456889999


Q ss_pred             HHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          457 LATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       457 Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      |+.+||+   .||++|||++++++||||.....+
T Consensus       274 li~~~l~---~dp~~Rps~~ell~hp~~~~~~~~  304 (321)
T 2c30_A          274 FLERMLV---RDPQERATAQELLDHPFLLQTGLP  304 (321)
T ss_dssp             HHHHHSC---SSTTTSCCHHHHHTSGGGGGCCCG
T ss_pred             HHHHHcc---CChhhCcCHHHHhcChhhccCCCc
Confidence            9999999   777999999999999999976543


No 48 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.1e-44  Score=365.63  Aligned_cols=274  Identities=24%  Similarity=0.383  Sum_probs=198.6

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||+||+|+...+++.||+|++........   .....+|..+                        +
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~E~~~------------------------l   54 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA---PCTAIREVSL------------------------L   54 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHH------------------------H
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccccc---chhHHHHHHH------------------------H
Confidence            579999999999999999999988999999999875432110   0111122222                        4


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.|+||+++++++...        +..++||||++ |+|.+++...+                   ..+++..++.++
T Consensus        55 ~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~-~~l~~~~~~~~-------------------~~~~~~~~~~~~  106 (324)
T 3mtl_A           55 KDLKHANIVTLHDIIHTE--------KSLTLVFEYLD-KDLKQYLDDCG-------------------NIINMHNVKLFL  106 (324)
T ss_dssp             SCCCCTTBCCEEEEEECS--------SCEEEEEECCS-EEHHHHHHHTT-------------------TCCCHHHHHHHH
T ss_pred             HhcCCCCCCeeeeEEeeC--------CEEEEEecccc-cCHHHHHHhcC-------------------CCCCHHHHHHHH
Confidence            455699999999998653        45999999995 79999998753                   247889999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.          
T Consensus       107 ~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~----------  175 (324)
T 3mtl_A          107 FQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TYDNEVVTLWYRPPDILLGS----------  175 (324)
T ss_dssp             HHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------------CGGGCCHHHHTTC----------
T ss_pred             HHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-ccccccCcccccChhhhcCC----------
Confidence            9999999999999999999999999999999999999999986543322 23455789999999998652          


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhcc-ChHHHHHhhhc-------------
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQY-DLNKWREYTRL-------------  440 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~-------------  440 (502)
                                 ..++.++|||||||++|||++|..|+......  ........+. ....|......             
T Consensus       176 -----------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
T 3mtl_A          176 -----------TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRA  244 (324)
T ss_dssp             -----------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCC
T ss_pred             -----------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccc
Confidence                       23456789999999999999998887554322  2222222221 11112111100             


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      .......+..++++.+|+.+||+   .||++|||++|+++||||....++
T Consensus       245 ~~~~~~~~~~~~~~~~li~~~L~---~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          245 EALLSHAPRLDSDGADLLTKLLQ---FEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHSC---SSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             hhhhhhcCCCCHHHHHHHHHHcC---cCcccCCCHHHHhcChhhhhcccc
Confidence            00012334578999999999999   777999999999999999976654


No 49 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=4.5e-45  Score=372.99  Aligned_cols=268  Identities=20%  Similarity=0.263  Sum_probs=203.4

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      -.++|++.+.||+|+||+||+|++..+|+.||+|++........         .             ......+. .+..
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---------~-------------~~~~~~~~-~E~~   78 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS---------P-------------GLSTEDLK-REAS   78 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTS---------S-------------SCCHHHHH-HHHH
T ss_pred             cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcccc---------c-------------cchHHHHH-HHHH
Confidence            34579999999999999999999999999999998875321000         0             00001111 1122


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++...        +..++||||+++|+|.+++.....                ....+++..++.
T Consensus        79 ~l~~l~hpnIv~~~~~~~~~--------~~~~lv~e~~~g~~L~~~l~~~~~----------------~~~~~~~~~~~~  134 (351)
T 3c0i_A           79 ICHMLKHPHIVELLETYSSD--------GMLYMVFEFMDGADLCFEIVKRAD----------------AGFVYSEAVASH  134 (351)
T ss_dssp             HHHHCCCTTBCCEEEEEEET--------TEEEEEEECCSSCBHHHHHHHHHH----------------TTCCCCHHHHHH
T ss_pred             HHHhCCCCCCCcEEEEEEeC--------CEEEEEEeCCCCCCHHHHHHHhcc----------------cCCCCCHHHHHH
Confidence            35566799999999998763        469999999999999998876420                112478999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ---IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~---~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.||+.||+|||+++|+||||||+|||++.++.   +||+|||+++....... ......||+.|+|||++.+..    
T Consensus       135 i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----  209 (351)
T 3c0i_A          135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-VAGGRVGTPHFMAPEVVKREP----  209 (351)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCC----
T ss_pred             HHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe-eecCCcCCcCccCHHHHcCCC----
Confidence            9999999999999999999999999999987654   99999999987654332 234567999999999997533    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                        ++.++|||||||++|||++|..|+..........+.......           ....+...+
T Consensus       210 ------------------~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~-----------~~~~~~~~s  260 (351)
T 3c0i_A          210 ------------------YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKM-----------NPRQWSHIS  260 (351)
T ss_dssp             ------------------BCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCC-----------CHHHHTTSC
T ss_pred             ------------------CCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCC-----------CccccccCC
Confidence                              446789999999999999999998765433332222222111           111224568


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      +++.+|+.+||+   .||++|||++++++||||+.
T Consensus       261 ~~~~~li~~~L~---~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          261 ESAKDLVRRMLM---LDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHHHHHHHHTC---SSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHHHHHHHHCC---CChhHCcCHHHHhcChhhcC
Confidence            999999999999   77799999999999999985


No 50 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=9.7e-45  Score=380.87  Aligned_cols=284  Identities=21%  Similarity=0.282  Sum_probs=201.6

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||+||+|++..+|+.||||++.....  .                       ........ .+...
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~--~-----------------------~~~~~~~~-~E~~~   78 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE--D-----------------------LIDCKRIL-REITI   78 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT--S-----------------------HHHHHHHH-HHHHH
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc--C-----------------------hHHHHHHH-HHHHH
Confidence            4679999999999999999999988898999988764211  0                       00001111 11233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|+||+++++++.....   ...+..++||||++ |+|.+++...+                    .+++..++.+
T Consensus        79 l~~l~h~nIv~l~~~~~~~~~---~~~~~~~lv~e~~~-~~L~~~~~~~~--------------------~l~~~~~~~i  134 (432)
T 3n9x_A           79 LNRLKSDYIIRLYDLIIPDDL---LKFDELYIVLEIAD-SDLKKLFKTPI--------------------FLTEEHIKTI  134 (432)
T ss_dssp             HHHCCCTTBCCEEEECCCSCT---TTCCCEEEEEECCS-EEHHHHHHSSC--------------------CCCHHHHHHH
T ss_pred             HHHcCCCCcceEEEEEecCCC---CcCCeEEEEEecCC-cCHHHHHhccC--------------------CCCHHHHHHH
Confidence            566679999999999876432   11246999999994 79999998653                    5889999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---------------------CCCcccCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---------------------VPNRTLLD  354 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---------------------~~~~~~gt  354 (502)
                      +.||+.||+|||+.+|+||||||+|||++.++.+||+|||+|+........                     .....+||
T Consensus       135 ~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  214 (432)
T 3n9x_A          135 LYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVT  214 (432)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCC
Confidence            999999999999999999999999999999999999999999976543211                     12556789


Q ss_pred             CCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCC----------CCCCcc-------
Q 039267          355 PDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTL----------RSISGL-------  417 (502)
Q Consensus       355 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~----------p~~~~~-------  417 (502)
                      +.|+|||++...                     ..++.++|||||||++|||++|..          |...+.       
T Consensus       215 ~~Y~APE~~~~~---------------------~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~  273 (432)
T 3n9x_A          215 RWYRAPELILLQ---------------------ENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP  273 (432)
T ss_dssp             CTTCCHHHHTTC---------------------SCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC---
T ss_pred             ccccCHHHHhcC---------------------CCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCc
Confidence            999999987532                     245678899999999999997533          322221       


Q ss_pred             -------------hhhHHHHHhhccChHH---------HHHhhhccC-cc-----ccccCCchHHHHHHHHhhhccCCCC
Q 039267          418 -------------KNFNMEIKTAQYDLNK---------WREYTRLRS-DF-----TILDLDSGRGWDLATKLISERGFLR  469 (502)
Q Consensus       418 -------------~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~-----~~~~~~s~~~~~Li~~~L~~~~~dP  469 (502)
                                   ..+..++...+.+...         ........+ ..     ...+..++++.+||.+||+   .||
T Consensus       274 ~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~---~dP  350 (432)
T 3n9x_A          274 DRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLK---FNP  350 (432)
T ss_dssp             -------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC---SST
T ss_pred             ccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhc---CCc
Confidence                         1122222222222111         111111100 00     1234579999999999999   777


Q ss_pred             CCCcCHHHHhcCCccccCCCchhH
Q 039267          470 RGRLSAAAALRHPYFLLGGDQAAA  493 (502)
Q Consensus       470 ~~Rps~~evl~HP~f~~~~~~~~~  493 (502)
                      ++|||++|+|+||||+.......+
T Consensus       351 ~~R~ta~e~L~Hp~f~~~~~~~~e  374 (432)
T 3n9x_A          351 NKRITIDQALDHPYLKDVRKKKLE  374 (432)
T ss_dssp             TTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred             ccCCCHHHHhcChhhhhccCcccC
Confidence            999999999999999977665543


No 51 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=6.8e-45  Score=366.01  Aligned_cols=266  Identities=17%  Similarity=0.252  Sum_probs=194.3

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||.||+|++..+|+.||||++......   ...+.+                        ..+...+
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~~~~~------------------------~~E~~~l   58 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE---LAREKV------------------------MREVKAL   58 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTT---THHHHH------------------------HHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCch---hHHHHH------------------------HHHHHHH
Confidence            5799999999999999999999889999999988753210   000111                        1122335


Q ss_pred             hhcCCccccccccccccccCCc-------------------------------------------------cccCCceEE
Q 039267          217 SRAAPETCAEFLGSFVADKTNS-------------------------------------------------QFTKGGKWL  247 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~-------------------------------------------------~~~~~~~~L  247 (502)
                      ..+.||||++++++|.......                                                 ...+...++
T Consensus        59 ~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  138 (332)
T 3qd2_B           59 AKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYI  138 (332)
T ss_dssp             TSCCCTTBCCEEEEEEECCSCHHHHHHHC--------------------------------------------CCCEEEE
T ss_pred             HhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEE
Confidence            5667999999999886543210                                                 011234899


Q ss_pred             EEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC
Q 039267          248 VWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG  327 (502)
Q Consensus       248 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~  327 (502)
                      ||||+++|+|.+++.....                 ....++..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus       139 v~e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  201 (332)
T 3qd2_B          139 QMQLCRKENLKDWMNRRCS-----------------LEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD  201 (332)
T ss_dssp             EEECCCSSCHHHHHHTCCS-----------------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             EEEecCCCCHHHHHhcccC-----------------ccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCC
Confidence            9999999999999987641                 22456778899999999999999999999999999999999999


Q ss_pred             cEEEeeccccccccCCCc-----------cCCCcccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccH
Q 039267          328 QIKLIDFGAATDLRIGKN-----------YVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDM  396 (502)
Q Consensus       328 ~~kL~DFGla~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DV  396 (502)
                      .+||+|||+++.......           .......||+.|+|||++.+..                      ++.++||
T Consensus       202 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----------------------~~~~~Di  259 (332)
T 3qd2_B          202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNN----------------------YSHKVDI  259 (332)
T ss_dssp             CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCC----------------------CCTHHHH
T ss_pred             CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCC----------------------CcchhhH
Confidence            999999999998754421           1234457999999999997643                      4457799


Q ss_pred             HHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHH
Q 039267          397 YSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAA  476 (502)
Q Consensus       397 wSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~  476 (502)
                      |||||++|||++|..|....... ......... ..             .....++++.+|+.+||+   .||++|||++
T Consensus       260 ~slG~il~el~~~~~~~~~~~~~-~~~~~~~~~-~~-------------~~~~~~~~~~~li~~~l~---~~p~~Rps~~  321 (332)
T 3qd2_B          260 FSLGLILFELLYSFSTQMERVRI-ITDVRNLKF-PL-------------LFTQKYPQEHMMVQDMLS---PSPTERPEAT  321 (332)
T ss_dssp             HHHHHHHHHHHSCCCCHHHHHHH-HHHHHTTCC-CH-------------HHHHHCHHHHHHHHHHHC---SSGGGSCCHH
T ss_pred             HHHHHHHHHHHHcCCChhHHHHH-HHHhhccCC-Cc-------------ccccCChhHHHHHHHHcc---CCCCcCCCHH
Confidence            99999999999976553211111 111111111 11             112236778899999999   7779999999


Q ss_pred             HHhcCCcccc
Q 039267          477 AALRHPYFLL  486 (502)
Q Consensus       477 evl~HP~f~~  486 (502)
                      |+++||||++
T Consensus       322 ~~l~~~~f~~  331 (332)
T 3qd2_B          322 DIIENAIFEN  331 (332)
T ss_dssp             HHHHSTTCCC
T ss_pred             HHhhchhhhc
Confidence            9999999985


No 52 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.5e-44  Score=359.74  Aligned_cols=275  Identities=20%  Similarity=0.202  Sum_probs=199.4

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++......                          .............+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~E~~~l   56 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD--------------------------PVIKKIALREIRML   56 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---------------------------HHHHHHHHHHHHHH
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccc--------------------------hHHHHHHHHHHHHH
Confidence            5799999999999999999999888999999887643210                          00001111122345


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.|+||+++++++...        +..++||||+++++|.+++...+                    .+++..++.++
T Consensus        57 ~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~~~--------------------~~~~~~~~~i~  108 (311)
T 4agu_A           57 KQLKHPNLVNLLEVFRRK--------RRLHLVFEYCDHTVLHELDRYQR--------------------GVPEHLVKSIT  108 (311)
T ss_dssp             HHCCCTTBCCEEEEEEET--------TEEEEEEECCSEEHHHHHHHTSS--------------------CCCHHHHHHHH
T ss_pred             HhCCCCCccchhheeecC--------CeEEEEEEeCCCchHHHHHhhhc--------------------CCCHHHHHHHH
Confidence            666799999999998653        45999999999999999887653                    57899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .|++.||+|||++||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.          
T Consensus       109 ~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~----------  177 (311)
T 4agu_A          109 WQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-YYDDEVATRWYRSPELLVGD----------  177 (311)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------------GGGCCHHHHHTC----------
T ss_pred             HHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-ccCCCcCCccccChHHHhcC----------
Confidence            9999999999999999999999999999999999999999987654332 23455789999999998652          


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhccChHHHHHhhhccC---c--------
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQYDLNKWREYTRLRS---D--------  443 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~--------  443 (502)
                                 ..++.++||||||+++|||++|..|+......  ........+...+.+........   .        
T Consensus       178 -----------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (311)
T 4agu_A          178 -----------TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPED  246 (311)
T ss_dssp             -----------SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSS
T ss_pred             -----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccc
Confidence                       23456789999999999999998887554432  22222222222222221111100   0        


Q ss_pred             ----cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          444 ----FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       444 ----~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                          ....+..+.++.+|+.+||+   .||++|||++|+++||||+...+.
T Consensus       247 ~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~f~~~~~~  294 (311)
T 4agu_A          247 MEPLELKFPNISYPALGLLKGCLH---MDPTERLTCEQLLHHPYFENIREI  294 (311)
T ss_dssp             CCCHHHHCTTCCHHHHHHHHHHCC---SSTTTSCCHHHHHTSGGGTTCC--
T ss_pred             cchhhhhcccccHHHHHHHHHHcc---CChhhcCCHHHHhcChHHHhccCH
Confidence                01124578889999999999   777999999999999999976543


No 53 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=4.3e-44  Score=366.29  Aligned_cols=262  Identities=18%  Similarity=0.199  Sum_probs=200.2

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|++.+.||+|+||.||+|+...+|+.||+|++++....          .              .........+
T Consensus        15 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~----------~--------------~~~~~~~~~E   70 (353)
T 2i0e_A           15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI----------Q--------------DDDVECTMVE   70 (353)
T ss_dssp             ----CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH----------H--------------TTCHHHHHHH
T ss_pred             CCCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh----------c--------------chHHHHHHHH
Confidence            346778999999999999999999999888899999988763110          0              0000111111


Q ss_pred             HHHHhhh-cCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          212 FNYRLSR-AAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       212 ~~~~l~~-~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      ... +.. ..||+|+++++++..        .+..++||||+++|+|.+++...+                    .+++.
T Consensus        71 ~~~-l~~~~~hp~iv~l~~~~~~--------~~~~~lv~E~~~gg~L~~~l~~~~--------------------~~~~~  121 (353)
T 2i0e_A           71 KRV-LALPGKPPFLTQLHSCFQT--------MDRLYFVMEYVNGGDLMYHIQQVG--------------------RFKEP  121 (353)
T ss_dssp             HHH-HTCTTCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHS--------------------SCCHH
T ss_pred             HHH-HHhcCCCCEEeeEEEEEEc--------CCEEEEEEeCCCCCcHHHHHHhcC--------------------CCCHH
Confidence            111 222 379999999999865        346999999999999999998754                    57899


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+..   
T Consensus       122 ~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~---  197 (353)
T 2i0e_A          122 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-VTTKTFCGTPDYIAPEIIAYQP---  197 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-CCBCCCCSCGGGCCHHHHTTCC---
T ss_pred             HHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC-cccccccCCccccChhhhcCCC---
Confidence            999999999999999999999999999999999999999999999998643222 2345668999999999997533   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                         ++.++|||||||++|||++|..|+........  ..          .+..  .....+...
T Consensus       198 -------------------~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~--~~----------~i~~--~~~~~p~~~  244 (353)
T 2i0e_A          198 -------------------YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQ----------SIME--HNVAYPKSM  244 (353)
T ss_dssp             -------------------BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HH----------HHHH--CCCCCCTTS
T ss_pred             -------------------cCCcccccchHHHHHHHHcCCCCCCCCCHHHH--HH----------HHHh--CCCCCCCCC
Confidence                               44678999999999999999998765432111  10          0111  122334567


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcC-----HHHHhcCCcccc
Q 039267          451 SGRGWDLATKLISERGFLRRGRLS-----AAAALRHPYFLL  486 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps-----~~evl~HP~f~~  486 (502)
                      +.++.+|+.+||+   .||.+||+     ++++++||||+.
T Consensus       245 s~~~~~li~~lL~---~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          245 SKEAVAICKGLMT---KHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             CHHHHHHHHHHTC---SCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             CHHHHHHHHHHhh---cCHHHcCCCCCCCHHHHhcCccccC
Confidence            9999999999999   66799994     799999999984


No 54 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.6e-44  Score=380.40  Aligned_cols=260  Identities=22%  Similarity=0.289  Sum_probs=201.3

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||+||+|....+|+.+|+|++......                         ......+. .+...
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-------------------------~~~~~~~~-~E~~i   63 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-------------------------ARDHQKLE-REARI   63 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-------------------------HHHHHHHH-HHHHH
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-------------------------HHHHHHHH-HHHHH
Confidence            35799999999999999999999999999999988753210                         00011111 12234


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..+..+
T Consensus        64 l~~l~hpnIv~l~~~~~~--------~~~~~lv~E~~~gg~L~~~i~~~~--------------------~~~e~~~~~i  115 (444)
T 3soa_A           64 CRLLKHPNIVRLHDSISE--------EGHHYLIFDLVTGGELFEDIVARE--------------------YYSEADASHC  115 (444)
T ss_dssp             HHHCCBTTBCCEEEEEEC--------SSEEEEEECCCBCCBHHHHHHHCS--------------------CCCHHHHHHH
T ss_pred             HHhCCCcCCCeEEEEEEE--------CCEEEEEEEeCCCCCHHHHHHHcC--------------------CCCHHHHHHH
Confidence            566789999999998865        346999999999999999998764                    5789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEc---cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLT---KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.||+.||+|||++||+||||||+|||++   .++.+||+|||+++....... ......||+.|+|||++.+..     
T Consensus       116 ~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~-----  189 (444)
T 3soa_A          116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDP-----  189 (444)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC-BCCCSCSCGGGCCHHHHTTCC-----
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc-eeecccCCcccCCHHHhcCCC-----
Confidence            99999999999999999999999999998   467899999999987654332 234567999999999997533     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh-HHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF-NMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                       ++.++|||||||++|+|++|..|+....... ...+......           ...+.++..+
T Consensus       190 -----------------~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~s  241 (444)
T 3soa_A          190 -----------------YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD-----------FPSPEWDTVT  241 (444)
T ss_dssp             -----------------BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-----------CCTTTTTTSC
T ss_pred             -----------------CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC-----------CCccccccCC
Confidence                             4467799999999999999999876543321 1111111111           1122345679


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      +++.+|+.+||+   .||.+|||++|+|+||||+.
T Consensus       242 ~~~~~li~~~L~---~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          242 PEAKDLINKMLT---INPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHHHHHHHHHSC---SSTTTSCCHHHHHHSCTTHH
T ss_pred             HHHHHHHHHHcC---CChhHCCCHHHHhcCccccC
Confidence            999999999999   77799999999999999974


No 55 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.6e-45  Score=368.47  Aligned_cols=259  Identities=20%  Similarity=0.272  Sum_probs=201.3

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||+||+|++..+++.||+|.+.....     .                       ...+ ..+...
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-----~-----------------------~~~~-~~E~~~   54 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-----D-----------------------QVLV-KKEISI   54 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-----H-----------------------HHHH-HHHHHH
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcc-----c-----------------------HHHH-HHHHHH
Confidence            3679999999999999999999988899999988764210     0                       0001 111223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++...        +..++||||+++|+|.+++...+                   ..+++..++.+
T Consensus        55 l~~l~hpnIv~~~~~~~~~--------~~~~lv~e~~~g~~L~~~l~~~~-------------------~~~~~~~~~~i  107 (321)
T 1tki_A           55 LNIARHRNILHLHESFESM--------EELVMIFEFISGLDIFERINTSA-------------------FELNEREIVSY  107 (321)
T ss_dssp             HHHSCCTTBCCEEEEEEET--------TEEEEEECCCCCCBHHHHHTSSS-------------------CCCCHHHHHHH
T ss_pred             HHhCCCCCCCeEeEEEecC--------CEEEEEEEeCCCCCHHHHHHhcC-------------------CCCCHHHHHHH
Confidence            5567899999999998653        46999999999999999997643                   25789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEcc--CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTK--RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      +.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....+..  .....||+.|+|||++.+..      
T Consensus       108 ~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~------  179 (321)
T 1tki_A          108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQHDV------  179 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE--EEEEESCGGGSCHHHHTTCE------
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc--cccccCChhhcCcHHhcCCC------
Confidence            999999999999999999999999999987  78999999999988754432  23457899999999997533      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                      ++.++|||||||++|||++|..|+........ ..+.......           ....++..+.
T Consensus       180 ----------------~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~s~  232 (321)
T 1tki_A          180 ----------------VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF-----------DEEAFKEISI  232 (321)
T ss_dssp             ----------------ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC-----------CHHHHTTSCH
T ss_pred             ----------------CCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC-----------ChhhhccCCH
Confidence                            34567999999999999999988765433211 1111111111           1112345689


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      ++.+|+.+||.   .||.+|||++|+|+||||+...
T Consensus       233 ~~~~li~~~L~---~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          233 EAMDFVDRLLV---KERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             HHHHHHHTTSC---SSGGGSCCHHHHHHSHHHHSCG
T ss_pred             HHHHHHHHHcC---CChhHCcCHHHHhcChhhccCc
Confidence            99999999999   7779999999999999998654


No 56 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.1e-44  Score=371.57  Aligned_cols=261  Identities=17%  Similarity=0.220  Sum_probs=192.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||+||+|+...+++.||+|++.......     +.                        .....
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~------------------------~~~E~   67 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-----EN------------------------VQREI   67 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC-----HH------------------------HHHHH
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc-----HH------------------------HHHHH
Confidence            45578999999999999999999998899999999887532100     00                        11112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++
T Consensus        68 ~~l~~l~hpniv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~  119 (361)
T 3uc3_A           68 INHRSLRHPNIVRFKEVILT--------PTHLAIIMEYASGGELYERICNAG--------------------RFSEDEAR  119 (361)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHS--------------------SCCHHHHH
T ss_pred             HHHHhCCCCCCCcEEEEEee--------CCEEEEEEEeCCCCCHHHHHHhcC--------------------CCCHHHHH
Confidence            33556679999999999875        346999999999999999998754                    58899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc--EEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ--IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~--~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      .++.||+.||+|||++||+||||||+|||++.++.  +||+|||+++......  ......||+.|+|||++.+..+.. 
T Consensus       120 ~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~-  196 (361)
T 3uc3_A          120 FFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLLRQEYDG-  196 (361)
T ss_dssp             HHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------------CTTSCHHHHHCSSCCH-
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--CCCCCcCCCCcCChhhhcCCCCCC-
Confidence            99999999999999999999999999999987765  9999999998543222  234567999999999997644322 


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHHHHHhhhccCccccccC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                          .++|||||||++|||++|..|+.....  .+.....          ........++....
T Consensus       197 --------------------~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~  246 (361)
T 3uc3_A          197 --------------------KIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ----------RILSVKYSIPDDIR  246 (361)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHH----------HHHTTCCCCCTTSC
T ss_pred             --------------------CeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHH----------HHhcCCCCCCCcCC
Confidence                                237999999999999999998764332  1221111          11111112222334


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      .++++.+||.+||+   .||++|||++|+++||||...
T Consensus       247 ~s~~~~~li~~~L~---~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          247 ISPECCHLISRIFV---ADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             CCHHHHHHHHHHSC---SCTTTSCCHHHHHTSHHHHTT
T ss_pred             CCHHHHHHHHHHcc---CChhHCcCHHHHHhCcchhcC
Confidence            68999999999999   777999999999999999654


No 57 
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-44  Score=370.23  Aligned_cols=268  Identities=17%  Similarity=0.219  Sum_probs=202.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEe---cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIV---PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~---~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      +..++|.+.+.||+|+||.||+|+..   .+|+.||||+++....                .....    ..+.+..+. 
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----------------~~~~~----~~~~~~~E~-  109 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATI----------------VQKAK----TTEHTRTER-  109 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEE----------------EEEES----SGGGCCCHH-
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHh----------------hhhhh----HHHHHHHHH-
Confidence            55678999999999999999999985   4788999998875211                00000    000111111 


Q ss_pred             HHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          211 WFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       211 ~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                         ..+..+ .|+||+++++++...        +..+|||||+++|+|.+++...+                    .+++
T Consensus       110 ---~~l~~l~~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~  158 (355)
T 1vzo_A          110 ---QVLEHIRQSPFLVTLHYAFQTE--------TKLHLILDYINGGELFTHLSQRE--------------------RFTE  158 (355)
T ss_dssp             ---HHHHHHHTCTTBCCEEEEEEET--------TEEEEEECCCCSCBHHHHHHHHS--------------------CCCH
T ss_pred             ---HHHHHccCCCceeEEEEEEeeC--------ceEEEEeecCCCCCHHHHHHHcC--------------------CCCH
Confidence               112233 599999999988653        35999999999999999998754                    5789


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..............||+.|+|||++.+..  
T Consensus       159 ~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--  236 (355)
T 1vzo_A          159 HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD--  236 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCC--
Confidence            999999999999999999999999999999999999999999999999876544444445668999999999997532  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHHHHHhhhccCccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNKWREYTRLRSDFTIL  447 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                                        ..++.++|||||||++|||++|..|+.....  ........          ...  .....+
T Consensus       237 ------------------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~----------~~~--~~~~~~  286 (355)
T 1vzo_A          237 ------------------SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR----------ILK--SEPPYP  286 (355)
T ss_dssp             ---------------------CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH----------HHH--CCCCCC
T ss_pred             ------------------CCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHH----------Hhc--cCCCCC
Confidence                              2345678999999999999999988753321  11111110          101  112334


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCc-----CHHHHhcCCccccCC
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRL-----SAAAALRHPYFLLGG  488 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rp-----s~~evl~HP~f~~~~  488 (502)
                      ...+..+.+|+.+||+   .||.+||     |++|+++||||+...
T Consensus       287 ~~~~~~~~~li~~~L~---~dP~~R~~~~~~s~~ell~h~~f~~~~  329 (355)
T 1vzo_A          287 QEMSALAKDLIQRLLM---KDPKKRLGCGPRDADEIKEHLFFQKIN  329 (355)
T ss_dssp             TTSCHHHHHHHHHHTC---SSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             cccCHHHHHHHHHHhh---hCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence            5678999999999999   7779999     999999999999643


No 58 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.6e-44  Score=370.69  Aligned_cols=259  Identities=20%  Similarity=0.295  Sum_probs=201.5

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++..+|+.||+|++......                         ......+.+ +...
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------------------------~~~~~~~~~-E~~i   81 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-------------------------ARDFQKLER-EARI   81 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-------------------------HHHHHHHHH-HHHH
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-------------------------HHHHHHHHH-HHHH
Confidence            35799999999999999999999889999999988753220                         001111111 2223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++...        +..++||||+++|+|.+++...+                    .+++..+..+
T Consensus        82 l~~l~hpnIv~~~~~~~~~--------~~~~lv~e~~~gg~L~~~l~~~~--------------------~~~~~~~~~~  133 (362)
T 2bdw_A           82 CRKLQHPNIVRLHDSIQEE--------SFHYLVFDLVTGGELFEDIVARE--------------------FYSEADASHC  133 (362)
T ss_dssp             HHHCCCTTBCCEEEEEECS--------SEEEEEECCCCSCBHHHHHTTCS--------------------CCCHHHHHHH
T ss_pred             HHhCCCCCCCeEEEEEEeC--------CEEEEEEecCCCCCHHHHHHHcC--------------------CCCHHHHHHH
Confidence            5566899999999998753        45999999999999999997653                    5789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccC---CcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKR---GQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.||+.||+|||+++|+||||||+|||++.+   +.+||+|||+++......  ......||+.|+|||++.+..     
T Consensus       134 ~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-----  206 (362)
T 2bdw_A          134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKKDP-----  206 (362)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC--SCCCSCSCTTTCCHHHHTTCC-----
T ss_pred             HHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc--ccccCCCCccccCHHHHccCC-----
Confidence            9999999999999999999999999999865   459999999998765433  234567999999999987533     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh-HHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF-NMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                       ++.++|||||||++|||++|..|+....... ...+....+.           .....++.++
T Consensus       207 -----------------~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~  258 (362)
T 2bdw_A          207 -----------------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-----------YPSPEWDTVT  258 (362)
T ss_dssp             -----------------CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-----------CCTTGGGGSC
T ss_pred             -----------------CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-----------CCcccccCCC
Confidence                             4567899999999999999998876543221 1111111111           1112345578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      +++.+|+.+||+   .||++|||++++|+||||..
T Consensus       259 ~~~~~li~~~L~---~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          259 PEAKSLIDSMLT---VNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHHHHHSC---SSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHHHHHHHcC---CChhhCcCHHHHhcCcccCC
Confidence            999999999999   77799999999999999974


No 59 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.7e-44  Score=373.28  Aligned_cols=281  Identities=16%  Similarity=0.133  Sum_probs=202.4

Q ss_pred             cccCCEEEEeeeeec--CceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          134 LKRTDFVIGDKLGEG--SFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G--~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ...++|++.+.||+|  +||+||+|++..+|+.||||++......                         ......+ ..
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~-~~   75 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-------------------------NEMVTFL-QG   75 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-------------------------HHHHHHH-HH
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-------------------------hHHHHHH-HH
Confidence            466789999999999  9999999999889999999988753210                         0001111 11


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      +...+..+.||||+++++++...        +..++||||+++|+|.+++....                  ...+++..
T Consensus        76 E~~~l~~l~h~niv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~  129 (389)
T 3gni_B           76 ELHVSKLFNHPNIVPYRATFIAD--------NELWVVTSFMAYGSAKDLICTHF------------------MDGMNELA  129 (389)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEET--------TEEEEEEECCTTCBHHHHHHHTC------------------TTCCCHHH
T ss_pred             HHHHHHhCCCCCCCcEeEEEEEC--------CEEEEEEEccCCCCHHHHHhhhc------------------ccCCCHHH
Confidence            22346667899999999998763        46999999999999999998752                  12578999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc------cCCCcccCCCCcCCcccccC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN------YVPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~  365 (502)
                      ++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........      .......||+.|+|||++.+
T Consensus       130 ~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (389)
T 3gni_B          130 IAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ  209 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHST
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhc
Confidence            999999999999999999999999999999999999999999999876532211      12334578999999999975


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHH----------
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWR----------  435 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------  435 (502)
                      ..                    ..++.++|||||||++|||++|..|+..............+. .+...          
T Consensus       210 ~~--------------------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  268 (389)
T 3gni_B          210 NL--------------------QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT-VPCLLDTSTIPAEEL  268 (389)
T ss_dssp             TS--------------------SCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------
T ss_pred             cC--------------------CCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-CCccccccccccccc
Confidence            21                    235567899999999999999998875433222111110000 00000          


Q ss_pred             -----------------------HhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          436 -----------------------EYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       436 -----------------------~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                                             ...............++++.+||.+||+   .||++|||++|+|+||||+.....
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~---~dP~~Rpta~ell~hp~f~~~~~~  343 (389)
T 3gni_B          269 TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQ---RNPDARPSASTLLNHSFFKQIKRR  343 (389)
T ss_dssp             -------------------------------------CCHHHHHHHHHHTC---SCTTTSCCHHHHTTSGGGGGC---
T ss_pred             cccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhh---cCcccCCCHHHHhcCHHHHHHhhc
Confidence                                   0000011112345578999999999999   788999999999999999976543


No 60 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.7e-44  Score=364.95  Aligned_cols=274  Identities=24%  Similarity=0.318  Sum_probs=195.7

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|++.+.||+|+||+||+|++..+|+.||+|+++......  .....+.+|                        .
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~E------------------------~   84 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE--GVPGTAIRE------------------------V   84 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHH------------------------H
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccccc--ccchhHHHH------------------------H
Confidence            45568999999999999999999999999999999887532210  000011111                        1


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++...        +..++||||++ |+|.+++...+                    .+++..++
T Consensus        85 ~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~-~~L~~~~~~~~--------------------~~~~~~~~  135 (329)
T 3gbz_A           85 SLLKELQHRNIIELKSVIHHN--------HRLHLIFEYAE-NDLKKYMDKNP--------------------DVSMRVIK  135 (329)
T ss_dssp             HHGGGCCCTTBCCEEEEEEET--------TEEEEEEECCS-EEHHHHHHHCT--------------------TCCHHHHH
T ss_pred             HHHHHcCCCCcceEEEEEecC--------CEEEEEEecCC-CCHHHHHhhcC--------------------CCCHHHHH
Confidence            235566799999999998763        46999999996 69999998764                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-----cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLT-----KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~-----~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      .++.||+.||+|||+++|+||||||+|||++     .++.+||+|||+++....... ......||+.|+|||++.+.. 
T Consensus       136 ~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~-  213 (329)
T 3gbz_A          136 SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR-QFTHEIITLWYRPPEILLGSR-  213 (329)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------CCTTCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc-ccCCCcCCccccCHHHhcCCC-
Confidence            9999999999999999999999999999994     555699999999987653322 234557899999999987532 


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhcc-ChHHHHHhhhccC---
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQY-DLNKWREYTRLRS---  442 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~---  442 (502)
                                          .++.++|||||||++|||++|..|+......  ........+. ....|........   
T Consensus       214 --------------------~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (329)
T 3gbz_A          214 --------------------HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ  273 (329)
T ss_dssp             --------------------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             --------------------CCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhh
Confidence                                3456789999999999999998887654332  2222222221 1112211111100   


Q ss_pred             cc----------ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          443 DF----------TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       443 ~~----------~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      .+          ......++++.+|+.+||+   .||++|||++|+|+||||+..
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          274 SFPKFRGKTLKRVLGALLDDEGLDLLTAMLE---MDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             TCCCCCCCCHHHHHGGGSCHHHHHHHHHHTC---SSGGGSCCHHHHHTSGGGSSS
T ss_pred             hhhhhccccHhhhcccccCHHHHHHHHHHcc---CChhhCCCHHHHhCCcccCCC
Confidence            00          0122368899999999999   777999999999999999964


No 61 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=6.6e-45  Score=369.88  Aligned_cols=260  Identities=22%  Similarity=0.264  Sum_probs=202.4

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|.+.+.||+|+||.||+|++..+|+.||+|++.+....           .              .........+..
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-----------~--------------~~~~~~~~~E~~   61 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-----------K--------------SDMHMRVEREIS   61 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-----------H--------------TTCSHHHHHHHH
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-----------c--------------hhHHHHHHHHHH
Confidence            346899999999999999999999999999999988752110           0              000001111223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++...        +..++||||+ +|+|.+++...+                    .+++..++.
T Consensus        62 ~l~~l~hpnIv~l~~~~~~~--------~~~~lv~E~~-~g~l~~~l~~~~--------------------~l~~~~~~~  112 (336)
T 3h4j_B           62 YLKLLRHPHIIKLYDVITTP--------TDIVMVIEYA-GGELFDYIVEKK--------------------RMTEDEGRR  112 (336)
T ss_dssp             HHTTCCCTTBCCEEEEEECS--------SEEEEEECCC-CEEHHHHHHHHC--------------------SCCHHHHHH
T ss_pred             HHHhCCCCCCCeEEEEEEeC--------CEEEEEEECC-CCcHHHHHHHcC--------------------CCCHHHHHH
Confidence            35666799999999998753        4599999999 799999998764                    588999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+.  .....+||+.|+|||++.+..+      
T Consensus       113 i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~------  184 (336)
T 3h4j_B          113 FFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVINGKLY------  184 (336)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--TTCCCTTSTTTSCGGGSCCSGG------
T ss_pred             HHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--ccccccCCcCcCCHHHHcCCCC------
Confidence            99999999999999999999999999999999999999999998765443  2345679999999999976432      


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                     .+.++|||||||++|||++|..|+........  ..          ..  .......++..++++
T Consensus       185 ---------------~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~~----------~i--~~~~~~~p~~~s~~~  235 (336)
T 3h4j_B          185 ---------------AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--FK----------KV--NSCVYVMPDFLSPGA  235 (336)
T ss_dssp             ---------------GCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--BC----------CC--CSSCCCCCTTSCHHH
T ss_pred             ---------------CCCccchhHHHHHHHHHHhCCCCCCCccHHHH--HH----------HH--HcCCCCCcccCCHHH
Confidence                           13467999999999999999998754321100  00          00  011223455679999


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      .+|+.+||+   .||.+|||++|+++||||+...
T Consensus       236 ~~li~~~L~---~dP~~Rpt~~eil~hp~~~~~~  266 (336)
T 3h4j_B          236 QSLIRRMIV---ADPMQRITIQEIRRDPWFNVNL  266 (336)
T ss_dssp             HHHHHTTSC---SSGGGSCCHHHHTTCHHHHTTC
T ss_pred             HHHHHHHcC---CChhHCcCHHHHHhChhhccCC
Confidence            999999999   7779999999999999998643


No 62 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=2.2e-44  Score=368.10  Aligned_cols=257  Identities=17%  Similarity=0.173  Sum_probs=203.2

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|++.+.||+|+||.||+|++..+|+.||+|++.+....          .              ........ ...
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----------~--------------~~~~~~~~-~E~   92 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV----------K--------------LKQIEHTL-NEK   92 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH----------H--------------TTCHHHHH-HHH
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc----------c--------------HHHHHHHH-HHH
Confidence            5567899999999999999999999989999999988752110          0              00001111 112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++
T Consensus        93 ~~l~~l~hp~iv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~--------------------~~~~~~~~  144 (350)
T 1rdq_E           93 RILQAVNFPFLVKLEFSFKD--------NSNLYMVMEYVAGGEMFSHLRRIG--------------------RFSEPHAR  144 (350)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--------SSEEEEEEECCTTCBHHHHHHHHC--------------------CCCHHHHH
T ss_pred             HHHHhCCCCCCCeEEEEEEc--------CCEEEEEEcCCCCCcHHHHHHHcC--------------------CCCHHHHH
Confidence            23566789999999998875        346999999999999999998754                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....    .....||+.|+|||++.+..      
T Consensus       145 ~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~------  214 (350)
T 1rdq_E          145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKG------  214 (350)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCC------
T ss_pred             HHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC----cccccCCccccCHHHhcCCC------
Confidence            99999999999999999999999999999999999999999999876432    23567999999999997543      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                      ++.++|||||||++|||++|..|+.........  .          .+..  .....+...+.+
T Consensus       215 ----------------~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~----------~i~~--~~~~~p~~~~~~  264 (350)
T 1rdq_E          215 ----------------YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY--E----------KIVS--GKVRFPSHFSSD  264 (350)
T ss_dssp             ----------------BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--H----------HHHH--CCCCCCTTCCHH
T ss_pred             ----------------CCCcCCEecccHhHhHHhhCCCCCCCCCHHHHH--H----------HHHc--CCCCCCCCCCHH
Confidence                            446789999999999999999887654321111  0          0111  112334567999


Q ss_pred             HHHHHHHhhhccCCCCCCCcC-----HHHHhcCCcccc
Q 039267          454 GWDLATKLISERGFLRRGRLS-----AAAALRHPYFLL  486 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps-----~~evl~HP~f~~  486 (502)
                      +.+|+.+||+   .||.+||+     ++++++||||..
T Consensus       265 ~~~li~~lL~---~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          265 LKDLLRNLLQ---VDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             HHHHHHHHSC---SCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HHHHHHHHhh---cCHHhccCCccCCHHHHHhCcCcCC
Confidence            9999999999   77799999     999999999984


No 63 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=5.8e-44  Score=364.56  Aligned_cols=260  Identities=23%  Similarity=0.238  Sum_probs=192.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||+||+|++..+++.||+|+++....      .+.+..|..                       
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~-----------------------  100 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD------KKIVRTEIG-----------------------  100 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CH-----------------------
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh------HHHHHHHHH-----------------------
Confidence            345679999999999999999999988999999999875321      011112222                       


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                       .+.++.||||+++++++...        +..++||||+++|+|.+++...+                    .+++..++
T Consensus       101 -~l~~l~h~niv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~  151 (349)
T 2w4o_A          101 -VLLRLSHPNIIKLKEIFETP--------TEISLVLELVTGGELFDRIVEKG--------------------YYSERDAA  151 (349)
T ss_dssp             -HHHHCCCTTBCCEEEEEECS--------SEEEEEECCCCSCBHHHHHTTCS--------------------SCCHHHHH
T ss_pred             -HHHhCCCCCCcceeeeEecC--------CeEEEEEEeCCCCCHHHHHHhcC--------------------CCCHHHHH
Confidence             24555699999999998653        46999999999999999997653                    47899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTK---RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.||+.||+|||+.+|+||||||+|||++.   ++.+||+|||+++......  ......||+.|+|||++.+..   
T Consensus       152 ~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~---  226 (349)
T 2w4o_A          152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTPGYCAPEILRGCA---  226 (349)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------------CGGGSCHHHHTTCC---
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc--ccccccCCCCccCHHHhcCCC---
Confidence            99999999999999999999999999999975   8999999999998764332  234567899999999997643   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH--HHHhhccChHHHHHhhhccCcccccc
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM--EIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                         ++.++|||||||++|||++|..|+.........  .+.....           ....+.++
T Consensus       227 -------------------~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~-----------~~~~~~~~  276 (349)
T 2w4o_A          227 -------------------YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY-----------YFISPWWD  276 (349)
T ss_dssp             -------------------CCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC-----------CCCTTTTT
T ss_pred             -------------------CCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC-----------ccCCchhh
Confidence                               445779999999999999999887654432211  1111111           01112345


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      ..+.++.+|+.+||+   .||++|||++++++||||.....
T Consensus       277 ~~~~~~~~li~~~L~---~dP~~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          277 EVSLNAKDLVRKLIV---LDPKKRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             TSCHHHHHHHHTTSC---SSGGGSCCHHHHHHSTTTTSTTC
T ss_pred             hCCHHHHHHHHHHcc---CChhhCcCHHHHhcCcccCCCcc
Confidence            678999999999999   77799999999999999996554


No 64 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=5e-44  Score=365.34  Aligned_cols=273  Identities=21%  Similarity=0.180  Sum_probs=198.6

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+.++||+|+||+||+|++..+++.||||+++....     .......|..+++++.                
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~e~~~l~~l~----------------   89 (360)
T 3llt_A           31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK-----YTRSAKIEADILKKIQ----------------   89 (360)
T ss_dssp             CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHH-----HHHHHHHHHHHHHHTC----------------
T ss_pred             eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchh-----hhhhhHHHHHHHHHhc----------------
Confidence            4567889999999999999999999988999999998763110     0011111222222221                


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                         .....|+||+++++++...        +..++||||+ +++|.+++....                  ...+++..+
T Consensus        90 ---~~~~~h~~iv~~~~~~~~~--------~~~~lv~e~~-~~~L~~~~~~~~------------------~~~~~~~~~  139 (360)
T 3llt_A           90 ---NDDINNNNIVKYHGKFMYY--------DHMCLIFEPL-GPSLYEIITRNN------------------YNGFHIEDI  139 (360)
T ss_dssp             ---CCSTTGGGBCCEEEEEEET--------TEEEEEECCC-CCBHHHHHHHTT------------------TCCCCHHHH
T ss_pred             ---ccCCCCCCeecccceeeEC--------CeeEEEEcCC-CCCHHHHHHhcC------------------CCCCCHHHH
Confidence               1233599999999998763        4699999999 999999998764                  124788999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-------------------------CCcEEEeeccccccccCCCccC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTK-------------------------RGQIKLIDFGAATDLRIGKNYV  347 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~-------------------------~~~~kL~DFGla~~~~~~~~~~  347 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.                         ++.+||+|||+++.....    
T Consensus       140 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----  215 (360)
T 3llt_A          140 KLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----  215 (360)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----
Confidence            999999999999999999999999999999975                         789999999999864432    


Q ss_pred             CCcccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHH
Q 039267          348 PNRTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIK  425 (502)
Q Consensus       348 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~  425 (502)
                      .....||+.|+|||++.+..                      ++.++|||||||++|||++|..|+.......  .....
T Consensus       216 ~~~~~gt~~y~aPE~~~~~~----------------------~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  273 (360)
T 3llt_A          216 HGSIINTRQYRAPEVILNLG----------------------WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMES  273 (360)
T ss_dssp             CCSCCSCGGGCCHHHHTTCC----------------------CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CcCccCcccccCcHHHcCCC----------------------CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            24567899999999997644                      4456799999999999999998876543322  11111


Q ss_pred             hhccChHHH-HHhhhccC-----------------------------ccccccCCchHHHHHHHHhhhccCCCCCCCcCH
Q 039267          426 TAQYDLNKW-REYTRLRS-----------------------------DFTILDLDSGRGWDLATKLISERGFLRRGRLSA  475 (502)
Q Consensus       426 ~~~~~~~~~-~~~~~~~~-----------------------------~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~  475 (502)
                      ..+.....+ ........                             ........++.+.+|+.+||+   .||++|||+
T Consensus       274 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~---~dP~~Rpta  350 (360)
T 3llt_A          274 IIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ---IDPTLRPSP  350 (360)
T ss_dssp             HTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC---SSGGGSCCH
T ss_pred             hcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc---CChhhCCCH
Confidence            111111111 11100000                             000011234778899999999   778999999


Q ss_pred             HHHhcCCccc
Q 039267          476 AAALRHPYFL  485 (502)
Q Consensus       476 ~evl~HP~f~  485 (502)
                      +|+|+||||+
T Consensus       351 ~elL~hp~f~  360 (360)
T 3llt_A          351 AELLKHKFLE  360 (360)
T ss_dssp             HHHTTSGGGC
T ss_pred             HHHhcCcccC
Confidence            9999999996


No 65 
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=3.9e-44  Score=354.18  Aligned_cols=273  Identities=21%  Similarity=0.287  Sum_probs=195.7

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      +++..++|++.+.||+|+||+||+|+...+|+.||+|++.....                          ..........
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~~~   55 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--------------------------SQEQKRLLMD   55 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--------------------------HHHHHHHHHH
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--------------------------cHHHHHHHHH
Confidence            35677899999999999999999999988898999988764211                          0011112222


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ....+....||||+++++++..        ++..++||||++ |+|.+++....                .....+++..
T Consensus        56 ~~~~~~~~~h~~iv~~~~~~~~--------~~~~~lv~e~~~-~~l~~~l~~~~----------------~~~~~~~~~~  110 (290)
T 3fme_A           56 LDISMRTVDCPFTVTFYGALFR--------EGDVWICMELMD-TSLDKFYKQVI----------------DKGQTIPEDI  110 (290)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEEC--------SSSEEEEEECCS-EEHHHHHHHHH----------------HTTCCCCHHH
T ss_pred             HHHHHHhCCCCeEEEEeeeeec--------cCCEEEEEehhc-cchHHHHHHHH----------------hcCCCCCHHH
Confidence            3334667789999999999875        345999999996 69988887531                0123689999


Q ss_pred             HHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDT-GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~-~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      ++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.....  
T Consensus       111 ~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~--  186 (290)
T 3fme_A          111 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV--AKDIDAGCKPYMAPERINPELN--  186 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------------CCCCCCSCHHHHSCCTT--
T ss_pred             HHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc--cccccCCCccccChhhcChhhc--
Confidence            999999999999999998 99999999999999999999999999998765432  2234578999999999742111  


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                      ...++.++|||||||++|||++|..|+...............           ........+..
T Consensus       187 ----------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~  239 (290)
T 3fme_A          187 ----------------QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-----------EPSPQLPADKF  239 (290)
T ss_dssp             ----------------C--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-----------SCCCCCCTTTS
T ss_pred             ----------------CcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc-----------cCCCCcccccC
Confidence                            134556789999999999999999998654333332211111           11111122457


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      +.++.+|+.+||+   .||++|||++|+++||||+...+
T Consensus       240 ~~~~~~li~~~l~---~~p~~Rpt~~e~l~hp~f~~~~~  275 (290)
T 3fme_A          240 SAEFVDFTSQCLK---KNSKERPTYPELMQHPFFTLHES  275 (290)
T ss_dssp             CHHHHHHHHHHTC---SSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             CHHHHHHHHHHhh---cChhhCcCHHHHHhCcccccCcc
Confidence            8999999999999   77799999999999999985443


No 66 
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=4.6e-44  Score=360.75  Aligned_cols=269  Identities=22%  Similarity=0.299  Sum_probs=200.0

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.+.||+|+||+||+|++..+++.||+|+++....       +.+..|.                        .
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~E~------------------------~   82 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-------KKIKREI------------------------K   82 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCH-------HHHHHHH------------------------H
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccch-------HHHHHHH------------------------H
Confidence            45789999999999999999999988999999998764210       1111111                        1


Q ss_pred             Hhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          215 RLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       215 ~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      .+..+ .|+||+++++++....      ....++||||+++++|.+++.                       .+++..++
T Consensus        83 ~l~~l~~~~~i~~~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~-----------------------~~~~~~~~  133 (330)
T 3nsz_A           83 ILENLRGGPNIITLADIVKDPV------SRTPALVFEHVNNTDFKQLYQ-----------------------TLTDYDIR  133 (330)
T ss_dssp             HHHHHTTSTTBCCEEEEEECTT------TCCEEEEEECCCCCCHHHHGG-----------------------GCCHHHHH
T ss_pred             HHHHcCCCCCEEEeeeeeccCC------CCceEEEEeccCchhHHHHHH-----------------------hCCHHHHH
Confidence            23334 4999999999887532      335899999999999999885                       36788899


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC-cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG-QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++ .+||+|||+++.......  .....+|+.|+|||++.+.      
T Consensus       134 ~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~y~aPE~~~~~------  205 (330)
T 3nsz_A          134 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDY------  205 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCGGGCCHHHHTTC------
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc--cccccccccccChhhhcCC------
Confidence            9999999999999999999999999999999777 899999999987654432  3455789999999998652      


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhc-cChHHH-HHhhhcc---------
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQ-YDLNKW-REYTRLR---------  441 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~---------  441 (502)
                                     ..++.++|||||||++|||++|..|+............... ...... .......         
T Consensus       206 ---------------~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (330)
T 3nsz_A          206 ---------------QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND  270 (330)
T ss_dssp             ---------------CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHH
T ss_pred             ---------------CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhh
Confidence                           23456789999999999999999988655444333222111 011110 0000000         


Q ss_pred             -------------CccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          442 -------------SDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       442 -------------~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                                   .........++++.+|+.+||+   .||++|||++|+|+||||+....
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          271 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR---YDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             HHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSC---SSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             hhhhccccchhhhccccccccCCHHHHHHHHHHhc---CCcccCCCHHHHhcCccHhhhcc
Confidence                         0001122368999999999999   77799999999999999996543


No 67 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=3e-44  Score=380.53  Aligned_cols=278  Identities=21%  Similarity=0.269  Sum_probs=197.0

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||+||+|.+..+|+.||||++.....                         .........+ +...
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-------------------------~~~~~~~~~~-E~~~  114 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-------------------------NQTHAKRAYR-ELVL  114 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-------------------------SHHHHHHHHH-HHHH
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-------------------------ChHHHHHHHH-HHHH
Confidence            4679999999999999999999988999999988865211                         0000111111 1223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++......  ...+..+|||||++ ++|.+.+..                      .+++..++.+
T Consensus       115 l~~l~hpnIv~l~~~~~~~~~~--~~~~~~~lv~E~~~-~~l~~~~~~----------------------~l~~~~~~~~  169 (464)
T 3ttj_A          115 MKCVNHKNIISLLNVFTPQKTL--EEFQDVYLVMELMD-ANLCQVIQM----------------------ELDHERMSYL  169 (464)
T ss_dssp             HHHCCCTTBCCCSEEECSCCST--TTCCEEEEEEECCS-EEHHHHHTS----------------------CCCHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEccCCcc--ccCCeEEEEEeCCC-CCHHHHHhh----------------------cCCHHHHHHH
Confidence            5666899999999998764321  11345899999995 567777642                      3688899999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||+|+......  ......||+.|+|||++.+..        
T Consensus       170 ~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--------  239 (464)
T 3ttj_A          170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMG--------  239 (464)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC--CC----CCCTTCCHHHHTTCC--------
T ss_pred             HHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc--ccCCCcccccccCHHHHcCCC--------
Confidence            9999999999999999999999999999999999999999998765432  334568999999999998643        


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhhHHHHHhhccChHHHH--------HhhhccCcc-
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNFNMEIKTAQYDLNKWR--------EYTRLRSDF-  444 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-  444 (502)
                                    |+.++|||||||++|||++|..|+....  ..+..++...+...+.+.        ......+.. 
T Consensus       240 --------------~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~  305 (464)
T 3ttj_A          240 --------------YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA  305 (464)
T ss_dssp             --------------CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCC
T ss_pred             --------------CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccC
Confidence                          4456799999999999999988875433  233334443333322211        111111110 


Q ss_pred             --cc----c-----------cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          445 --TI----L-----------DLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       445 --~~----~-----------~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                        ..    +           ...+.++.+|+.+||+   .||++|||++|+|+||||+...+..
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~---~dP~~R~ta~e~L~Hp~~~~~~~~~  366 (464)
T 3ttj_A          306 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV---IDPAKRISVDDALQHPYINVWYDPA  366 (464)
T ss_dssp             CCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC---SSTTTSCCHHHHHTSTTTGGGCCHH
T ss_pred             CCChHHhCcccccccccccccccCHHHHHHHHHHcC---CChhhCCCHHHHhcChhhhhccCcc
Confidence              00    0           0115678999999999   7889999999999999999765543


No 68 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=8.2e-44  Score=350.70  Aligned_cols=265  Identities=20%  Similarity=0.279  Sum_probs=203.4

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      +.+..++|++.+.||+|+||+||+|++..++..||+|++......                         ..........
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~~   58 (279)
T 3fdn_A            4 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-------------------------KAGVEHQLRR   58 (279)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-------------------------HHTCHHHHHH
T ss_pred             ceeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccc-------------------------hhhHHHHHHH
Confidence            456778999999999999999999999888889999887652110                         0000111112


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ....+..+.||||+++++++..        .+..++||||+++|+|.+++....                    .+++..
T Consensus        59 e~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~l~~~l~~~~--------------------~~~~~~  110 (279)
T 3fdn_A           59 EVEIQSHLRHPNILRLYGYFHD--------ATRVYLILEYAPLGTVYRELQKLS--------------------KFDEQR  110 (279)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEEC--------SSEEEEEECCCTTEEHHHHHHHHS--------------------SCCHHH
T ss_pred             HHHHHHcCCCCCCcchhheEec--------CCEEEEEEecCCCCcHHHHHHhcC--------------------CCCHHH
Confidence            2234666789999999999865        345999999999999999998754                    578999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.++.||+.||+|||+.+|+||||||+|||++.++.+||+|||++......   ......||+.|+|||++.+...   
T Consensus       111 ~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~---  184 (279)
T 3fdn_A          111 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTDLCGTLDYLPPEMIEGRMH---  184 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----------CCCCTTCCHHHHTTCCC---
T ss_pred             HHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc---cccccCCCCCccCHhHhccCCC---
Confidence            9999999999999999999999999999999999999999999998754432   2235578999999999876443   


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                         +.++||||||+++|||++|..|+..........            ....  .....++..+
T Consensus       185 -------------------~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------------~~~~--~~~~~~~~~~  231 (279)
T 3fdn_A          185 -------------------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK------------RISR--VEFTFPDFVT  231 (279)
T ss_dssp             -------------------CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------------HHHH--TCCCCCTTSC
T ss_pred             -------------------CccchhHhHHHHHHHHHHCCCCCCCCcHHHHHH------------HHHh--CCCCCCCcCC
Confidence                               346799999999999999998875443221110            1111  1223345578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      +++.+|+.+||+   .||++|||++|+++||||+......
T Consensus       232 ~~~~~li~~~l~---~~p~~Rps~~e~l~h~~~~~~~~~~  268 (279)
T 3fdn_A          232 EGARDLISRLLK---HNPSQRPMLREVLEHPWITANSSKP  268 (279)
T ss_dssp             HHHHHHHHHHCC---SSGGGSCCHHHHHHCHHHHHHCSSC
T ss_pred             HHHHHHHHHHhc---cChhhCCCHHHHhhCccccCCccCc
Confidence            999999999999   7779999999999999999765544


No 69 
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=3.5e-44  Score=375.20  Aligned_cols=269  Identities=21%  Similarity=0.266  Sum_probs=194.8

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|.+.+.||+|+||+||+|....+++.||+|++.+.......     . .+.             .....+. .+..
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----~-~~~-------------~~~~~~~-~E~~  192 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS-----A-REA-------------DPALNVE-TEIE  192 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC---------------------------CCHH-HHHH
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccc-----c-ccc-------------hhHHHHH-HHHH
Confidence            457899999999999999999999999999999998864221000     0 000             0000111 1223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++..         +..++||||+++|+|.+++...+                    .+++..++.
T Consensus       193 ~l~~l~hpniv~l~~~~~~---------~~~~lv~e~~~~g~L~~~l~~~~--------------------~~~~~~~~~  243 (419)
T 3i6u_A          193 ILKKLNHPCIIKIKNFFDA---------EDYYIVLELMEGGELFDKVVGNK--------------------RLKEATCKL  243 (419)
T ss_dssp             HHHHCCCTTBCCCCEEEES---------SEEEEEEECCTTCBGGGGTSSSC--------------------CCCHHHHHH
T ss_pred             HHHhCCCCCEeeEEEEEec---------CceEEEEEcCCCCcHHHHHhccC--------------------CCCHHHHHH
Confidence            4566789999999998743         24899999999999999887553                    588999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccC---CcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKR---GQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.||+.||+|||+++|+||||||+|||++.+   +.+||+|||+++......  ......||+.|+|||++.+..    
T Consensus       244 i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----  317 (419)
T 3i6u_A          244 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVG----  317 (419)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------CTTCCTTTTC-------
T ss_pred             HHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCc--cccccCCCCCccCceeeecCC----
Confidence            99999999999999999999999999999754   459999999999765432  234567999999999986421    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHHHHHhhhccCccccccC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                     ...++.++|||||||++|||++|..|+.....  .....+.......           ....+..
T Consensus       318 ---------------~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~  371 (419)
T 3i6u_A          318 ---------------TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF-----------IPEVWAE  371 (419)
T ss_dssp             ----------------CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCC-----------CHHHHTT
T ss_pred             ---------------CCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCC-----------Cchhhcc
Confidence                           12345678999999999999999988764432  2222222222111           0112344


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      .++++.+|+.+||+   .||++|||++|+++||||+..
T Consensus       372 ~~~~~~~li~~~L~---~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          372 VSEKALDLVKKLLV---VDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             SCHHHHHHHHHHSC---SSTTTSCCHHHHHHSGGGCCH
T ss_pred             cCHHHHHHHHHHcc---CChhHCcCHHHHhCCcccCCh
Confidence            68999999999999   777999999999999999853


No 70 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.3e-44  Score=375.65  Aligned_cols=273  Identities=21%  Similarity=0.265  Sum_probs=205.0

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|++.+.||+|+||.||+|+...+|+.||+|++.+....          .+              .+...+.++
T Consensus        56 ~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~----------~~--------------~~~~~~~~E  111 (412)
T 2vd5_A           56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML----------KR--------------GEVSCFREE  111 (412)
T ss_dssp             HSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH----------HH--------------GGGCCHHHH
T ss_pred             ccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh----------hH--------------HHHHHHHHH
Confidence            346778999999999999999999999999999999998752110          00              000111111


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                       ...+..+.|+||++++++|..        .+..+|||||+++|+|.+++...+                   ..+++..
T Consensus       112 -~~il~~~~hp~Iv~l~~~~~~--------~~~~~lVmE~~~gg~L~~~l~~~~-------------------~~l~~~~  163 (412)
T 2vd5_A          112 -RDVLVNGDRRWITQLHFAFQD--------ENYLYLVMEYYVGGDLLTLLSKFG-------------------ERIPAEM  163 (412)
T ss_dssp             -HHHHHHSCTTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHHS-------------------SCCCHHH
T ss_pred             -HHHHHhcCCCCeeeEEEEEee--------CCEEEEEEcCCCCCcHHHHHHhcC-------------------CCCCHHH
Confidence             123456689999999999875        346999999999999999998653                   2578999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.............+||+.|+|||++........
T Consensus       164 ~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~  243 (412)
T 2vd5_A          164 ARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPG  243 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTT
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcC
Confidence            99999999999999999999999999999999999999999999998876554433445689999999999873111000


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHHhhccChHHHHHhhhccCccc-ccc
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIKTAQYDLNKWREYTRLRSDFT-ILD  448 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  448 (502)
                                     ...++.++|||||||++|||++|..|+.......  ..+..        +...    ..++ ...
T Consensus       244 ---------------~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~--------~~~~----~~~p~~~~  296 (412)
T 2vd5_A          244 ---------------TGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH--------YKEH----LSLPLVDE  296 (412)
T ss_dssp             ---------------CSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--------HHHH----CCCC----
T ss_pred             ---------------CCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh--------cccC----cCCCcccc
Confidence                           1245678899999999999999999886543221  11111        1000    0011 124


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCC---cCHHHHhcCCccccC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGR---LSAAAALRHPYFLLG  487 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~R---ps~~evl~HP~f~~~  487 (502)
                      .++.++++||.+||. +|   .+|   |+++|+++||||+..
T Consensus       297 ~~s~~~~dli~~lL~-~p---~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          297 GVPEEARDFIQRLLC-PP---ETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             CCCHHHHHHHHTTSS-CG---GGCTTTTTHHHHHTSGGGTTC
T ss_pred             CCCHHHHHHHHHHcC-Ch---hhcCCCCCHHHHhcCCCcCCC
Confidence            579999999999998 77   665   699999999999843


No 71 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=7.2e-44  Score=363.13  Aligned_cols=286  Identities=20%  Similarity=0.267  Sum_probs=202.9

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||+||+|++..+|+.||+|++........                         ..... ..+...
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------~~~~~-~~E~~~   69 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG-------------------------FPITA-LREIKI   69 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSS-------------------------SCHHH-HHHHHH
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccccc-------------------------chHHH-HHHHHH
Confidence            4689999999999999999999988999999998765322100                         00001 111223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|+||+++++++...........+..++||||++ |+|.+.+....                   ..+++..++.+
T Consensus        70 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-------------------~~~~~~~~~~i  129 (351)
T 3mi9_A           70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVL-------------------VKFTLSEIKRV  129 (351)
T ss_dssp             HHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTT-------------------SCCCHHHHHHH
T ss_pred             HHhccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhcc-------------------CCCCHHHHHHH
Confidence            55667999999999987754322223456899999995 68888887642                   25789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc---cCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN---YVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......   .......||+.|+|||++.+.      
T Consensus       130 ~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------  203 (351)
T 3mi9_A          130 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE------  203 (351)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC------
T ss_pred             HHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCC------
Confidence            99999999999999999999999999999999999999999987653322   223456789999999998652      


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH--HHHHhhcc-ChHHHHHhhhc--cCccccc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN--MEIKTAQY-DLNKWREYTRL--RSDFTIL  447 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~--~~~~~~~  447 (502)
                                     ..++.++|||||||++|||++|..|+........  ......+. ....|......  .......
T Consensus       204 ---------------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (351)
T 3mi9_A          204 ---------------RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV  268 (351)
T ss_dssp             ---------------CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCC
T ss_pred             ---------------CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccc
Confidence                           2345678999999999999999888765443222  12221111 11112111100  0000000


Q ss_pred             -------------cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          448 -------------DLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       448 -------------~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                                   ...++++.+|+.+||+   .||++|||++|+++||||+....+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~R~t~~e~l~hp~f~~~~~~~  322 (351)
T 3mi9_A          269 KGQKRKVKDRLKAYVRDPYALDLIDKLLV---LDPAQRIDSDDALNHDFFWSDPMPS  322 (351)
T ss_dssp             SSCCCCHHHHHHHHHCCHHHHHHHHHHSC---SSGGGSCCHHHHHTSGGGGSSSCCC
T ss_pred             cccccCHHHHhhhccCChHHHHHHHHHhc---CChhhCCCHHHHhCCCCcCCCCCcc
Confidence                         0126778999999999   7779999999999999998655543


No 72 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1e-43  Score=351.82  Aligned_cols=261  Identities=19%  Similarity=0.219  Sum_probs=192.9

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||+||+|+...++..||+|.+.......                          ....+ ..+...+
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------------------~~~~~-~~E~~~l   74 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV--------------------------PMEQI-EAEIEVL   74 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS--------------------------CHHHH-HHHHHHH
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch--------------------------hHHHH-HHHHHHH
Confidence            57999999999999999999998899999999887632110                          00011 1122345


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++..        .+..++||||+++|+|.+++....                .....+++..++.++
T Consensus        75 ~~l~hp~iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~~i~  130 (285)
T 3is5_A           75 KSLDHPNIIKIFEVFED--------YHNMYIVMETCEGGELLERIVSAQ----------------ARGKALSEGYVAELM  130 (285)
T ss_dssp             HTCCCTTBCCEEEEEEC--------SSEEEEEECCCSCCBHHHHHHHHH----------------HHTCCCCHHHHHHHH
T ss_pred             HhCCCchHHhHHHheec--------CCeEEEEEEeCCCCcHHHHHHhhh----------------hcccCCCHHHHHHHH
Confidence            66679999999999865        346999999999999999997542                011358899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVL---TKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .|++.||+|||+.+|+||||||+|||+   +.++.+||+|||+++......  ......||+.|+|||++..        
T Consensus       131 ~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~--------  200 (285)
T 3is5_A          131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--HSTNAAGTALYMAPEVFKR--------  200 (285)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------CTTGGGCCHHHHTT--------
T ss_pred             HHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc--cCcCcccccCcCChHHhcc--------
Confidence            999999999999999999999999999   556889999999998765432  2345678999999998753        


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                     .++.++||||||+++|||++|..|+...............           ...........+++
T Consensus       201 ---------------~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  254 (285)
T 3is5_A          201 ---------------DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK-----------EPNYAVECRPLTPQ  254 (285)
T ss_dssp             ---------------CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CCCCCC--CCCCHH
T ss_pred             ---------------CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC-----------CcccccccCcCCHH
Confidence                           2345789999999999999999887554322111110000           00001112236889


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      +.+|+.+||+   .||++|||++|+++||||+++
T Consensus       255 ~~~li~~~L~---~dP~~Rps~~e~l~hp~f~~a  285 (285)
T 3is5_A          255 AVDLLKQMLT---KDPERRPSAAQVLHHEWFKQA  285 (285)
T ss_dssp             HHHHHHHHTC---SCTTTSCCHHHHHTSGGGGC-
T ss_pred             HHHHHHHHcc---CChhhCcCHHHHhcCHHhhcC
Confidence            9999999999   777999999999999999863


No 73 
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.9e-43  Score=350.11  Aligned_cols=263  Identities=21%  Similarity=0.245  Sum_probs=199.8

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      .....|.+.+.||+|+||+||+|.+..++..||+|.+......                         ......+. ...
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-------------------------~~~~~~~~-~e~   76 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-------------------------KSERQRFK-EEA   76 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-------------------------HHHHHHHH-HHH
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-------------------------HHHHHHHH-HHH
Confidence            3445689999999999999999999888889998887753210                         00111111 122


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++.....    .++..++||||+++|+|.+++...+                    .+++..++
T Consensus        77 ~~l~~l~h~~iv~~~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~  132 (290)
T 1t4h_A           77 EMLKGLQHPNIVRFYDSWESTVK----GKKCIVLVTELMTSGTLKTYLKRFK--------------------VMKIKVLR  132 (290)
T ss_dssp             HHHTTCCCTTBCCEEEEEEEESS----SCEEEEEEEECCCSCBHHHHHHHHS--------------------SCCHHHHH
T ss_pred             HHHHhCCCCCeeeeeeeeccccC----CCceEEEEEEecCCCCHHHHHHHcc--------------------CCCHHHHH
Confidence            34566689999999998865432    1345899999999999999998754                    57889999


Q ss_pred             HHHHHHHHHHHHHHHcC--CeeccCCCCcEEEc-cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          294 QILRQIITSLKKIHDTG--IVHRDVKPANLVLT-KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~--IiHrDlKp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.||+.||+|||+.+  |+||||||+|||++ .++.+||+|||+++.....   ......||+.|+|||++.+     
T Consensus       133 ~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~t~~y~aPE~~~~-----  204 (290)
T 1t4h_A          133 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYEE-----  204 (290)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGGT-----
T ss_pred             HHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc---ccccccCCcCcCCHHHHhc-----
Confidence            99999999999999999  99999999999997 7899999999999764432   2234568999999998853     


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                        .++.++||||||+++|||++|..|+............           ..............
T Consensus       205 ------------------~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  255 (290)
T 1t4h_A          205 ------------------KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR-----------VTSGVKPASFDKVA  255 (290)
T ss_dssp             ------------------CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH-----------HTTTCCCGGGGGCC
T ss_pred             ------------------cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHH-----------HhccCCccccCCCC
Confidence                              2446789999999999999999887554332221111           11111112233446


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      ++++.+|+.+||+   .||.+|||++++++||||+.
T Consensus       256 ~~~l~~li~~~l~---~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          256 IPEVKEIIEGCIR---QNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             CHHHHHHHHHHSC---SSGGGSCCHHHHHTSGGGC-
T ss_pred             CHHHHHHHHHHcc---CChhhCCCHHHHhhCccccc
Confidence            7889999999999   77799999999999999985


No 74 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=8.3e-44  Score=351.06  Aligned_cols=265  Identities=20%  Similarity=0.276  Sum_probs=205.0

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||.||+|++..+|+.||+|++......                         ......+. .+...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~-~e~~~   58 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-------------------------ARDFQKLE-REARI   58 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-------------------------HHHHHHHH-HHHHH
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-------------------------HHHHHHHH-HHHHH
Confidence            46899999999999999999999888999999988753220                         01111111 12233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|+||+++++++..        .+..++||||+++++|.+++...+                    .+++..+..+
T Consensus        59 l~~l~h~~i~~~~~~~~~--------~~~~~~v~e~~~~~~l~~~~~~~~--------------------~~~~~~~~~~  110 (284)
T 3kk8_A           59 CRKLQHPNIVRLHDSIQE--------ESFHYLVFDLVTGGELFEDIVARE--------------------FYSEADASHC  110 (284)
T ss_dssp             HHHCCCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHHS--------------------SCCHHHHHHH
T ss_pred             HHHcCCCCcCeEEEEEEc--------CCEEEEEEecCCCCCHHHHHHhcC--------------------CCCHHHHHHH
Confidence            566689999999999865        345899999999999999998764                    5789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ---IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~---~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.|++.||+|||+.+|+||||||+|||++.++.   +||+|||++........  .....||+.|+|||++.+..     
T Consensus       111 ~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-----  183 (284)
T 3kk8_A          111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPGYLSPEVLKKDP-----  183 (284)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB--CCCSCSCGGGCCHHHHTTCC-----
T ss_pred             HHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc--ccCCCCCcCCcCchhhcCCC-----
Confidence            999999999999999999999999999986655   99999999987654432  24567899999999997643     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHH-HHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNME-IKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                       ++.++||||||+++|+|++|..|+.......... ......           ......+...+
T Consensus       184 -----------------~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~  235 (284)
T 3kk8_A          184 -----------------YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY-----------DYPSPEWDTVT  235 (284)
T ss_dssp             -----------------BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-----------CCCTTTTTTSC
T ss_pred             -----------------CCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccc-----------cCCchhhcccC
Confidence                             3456799999999999999999876544322211 111111           11122334578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchh
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAA  492 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~  492 (502)
                      +++.+|+.+||+   .||++|||++|+++||||+.......
T Consensus       236 ~~~~~li~~~l~---~dp~~Rps~~~~l~h~~~~~~~~~~~  273 (284)
T 3kk8_A          236 PEAKSLIDSMLT---VNPKKRITADQALKVPWICNRERVAS  273 (284)
T ss_dssp             HHHHHHHHHHSC---SSTTTSCCHHHHTTSHHHHSCCCGGG
T ss_pred             HHHHHHHHHHcc---cChhhCCCHHHHhcCccccCChhHHh
Confidence            999999999999   77799999999999999997665443


No 75 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.3e-44  Score=365.68  Aligned_cols=259  Identities=20%  Similarity=0.269  Sum_probs=177.6

Q ss_pred             CEEEE---eeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          138 DFVIG---DKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       138 ~~~~~---~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      +|++.   +.||+|+||+||+|++..+|+.||||++.+...       ..                       ..++. .
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~-----------------------~~~e~-~   57 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME-------AN-----------------------TQKEI-T   57 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGH-------HH-----------------------HHHHH-H
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhh-------hh-----------------------HHHHH-H
Confidence            45554   789999999999999988999999998864210       00                       11111 1


Q ss_pred             Hhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          215 RLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       215 ~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      .+..+ .||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++
T Consensus        58 ~l~~l~~h~niv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~  109 (325)
T 3kn6_A           58 ALKLCEGHPNIVKLHEVFHD--------QLHTFLVMELLNGGELFERIKKKK--------------------HFSETEAS  109 (325)
T ss_dssp             HHHHTTTCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHCS--------------------CCCHHHHH
T ss_pred             HHHHhcCCCCeeEEEEEEEc--------CCEEEEEEEccCCCcHHHHHHhcC--------------------CCCHHHHH
Confidence            23333 49999999999865        346999999999999999998764                    58899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG---QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++   .+||+|||+++....... ......||+.|+|||++.+..   
T Consensus       110 ~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~---  185 (325)
T 3kn6_A          110 YIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKTPCFTLHYAAPELLNQNG---  185 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------------------CC---
T ss_pred             HHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-cccccCCCcCccCHHHhcCCC---
Confidence            9999999999999999999999999999997765   899999999987654332 234567899999999987543   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh-----HHHHHhhccChHHHHHhhhccCccc
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF-----NMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                                         ++.++|||||||++|||++|..|+.......     .........        ........
T Consensus       186 -------------------~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~--------~~~~~~~~  238 (325)
T 3kn6_A          186 -------------------YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK--------GDFSFEGE  238 (325)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT--------TCCCCCSH
T ss_pred             -------------------CCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc--------CCCCCCcc
Confidence                               4457799999999999999998876443211     111110000        00011112


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      .+...++++++|+.+||+   .||.+|||++++++||||+....
T Consensus       239 ~~~~~s~~~~~li~~~L~---~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          239 AWKNVSQEAKDLIQGLLT---VDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             HHHTSCHHHHHHHHHHHC---CCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             cccCCCHHHHHHHHHHCC---CChhHCCCHHHHhcChhhccCcc
Confidence            234578999999999999   77799999999999999997644


No 76 
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=7.7e-44  Score=354.01  Aligned_cols=285  Identities=21%  Similarity=0.281  Sum_probs=188.6

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .+.+..++|.+.+.||+|+||.||+|+...+++.||+|++......   ...+.+.+|..+++                 
T Consensus         9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~-----------------   68 (303)
T 2vwi_A            9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ---TSMDELLKEIQAMS-----------------   68 (303)
T ss_dssp             ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCC-----------------
T ss_pred             ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc---hhHHHHHHHHHHHh-----------------
Confidence            4567788999999999999999999998889999999988754321   11122333444443                 


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                             .+.||||+++++++...        +..++||||+++++|.+++......            .......+++.
T Consensus        69 -------~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~------------~~~~~~~~~~~  121 (303)
T 2vwi_A           69 -------QCHHPNIVSYYTSFVVK--------DELWLVMKLLSGGSVLDIIKHIVAK------------GEHKSGVLDES  121 (303)
T ss_dssp             -------CCCCTTBCCEEEEEESS--------SCEEEEEECCTTCBHHHHHHHHHHT------------TTTTTCSSCHH
T ss_pred             -------hcCCCCEeeEEEEEeec--------CCcEEEehhccCCchHHHHHHHhhc------------cccccCCCCHH
Confidence                   34599999999998763        3599999999999999999753100            00112358899


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc----cCCCcccCCCCcCCcccccCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN----YVPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~  366 (502)
                      .++.++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++.......    .......||+.|+|||++...
T Consensus       122 ~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  201 (303)
T 2vwi_A          122 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV  201 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccc
Confidence            9999999999999999999999999999999999999999999999987654321    122345789999999988641


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTI  446 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (502)
                                           ..++.++||||||+++|||++|..|+................. ..   ..........
T Consensus       202 ---------------------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~  256 (303)
T 2vwi_A          202 ---------------------RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-PS---LETGVQDKEM  256 (303)
T ss_dssp             ---------------------HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSC-CC---TTC-----CC
T ss_pred             ---------------------cCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCC-Cc---cccccccchh
Confidence                                 2345678999999999999999988765433222111111110 00   0000011123


Q ss_pred             ccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          447 LDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       447 ~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      ....+.++.+|+.+||+   .||.+|||++++++||||+.....
T Consensus       257 ~~~~~~~~~~li~~~l~---~dp~~Rps~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          257 LKKYGKSFRKMISLCLQ---KDPEKRPTAAELLRHKFFQKAKNK  297 (303)
T ss_dssp             CCCCCHHHHHHHHHHCC---SSGGGSCCHHHHHTSTTC------
T ss_pred             hhhhhHHHHHHHHHHcc---CChhhCcCHHHHhhChhhhcCCCC
Confidence            45578899999999999   777999999999999999976553


No 77 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=5.6e-44  Score=362.66  Aligned_cols=260  Identities=22%  Similarity=0.254  Sum_probs=202.7

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||+||+|++..+|+.||||++........... . ......+.+                  +...
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~-~-~~~~~~~~~------------------E~~~   82 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWI-E-DPKLGKVTL------------------EIAI   82 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEE-E-ETTTEEEEH------------------HHHH
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhccccccc-c-hHHHHHHHH------------------HHHH
Confidence            3579999999999999999999999999999999987543211000 0 000001111                  1123


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCC-cHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDR-TLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      +..+.||||+++++++..        .+..++||||+.+| +|.+++...+                    .+++..++.
T Consensus        83 l~~l~h~~Iv~~~~~~~~--------~~~~~lv~e~~~~g~~l~~~~~~~~--------------------~l~~~~~~~  134 (335)
T 3dls_A           83 LSRVEHANIIKVLDIFEN--------QGFFQLVMEKHGSGLDLFAFIDRHP--------------------RLDEPLASY  134 (335)
T ss_dssp             HTTCCCTTBCCEEEEEEC--------SSEEEEEEECCTTSCBHHHHHHTCC--------------------CCCHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEee--------CCEEEEEEEeCCCCccHHHHHHhcC--------------------CCCHHHHHH
Confidence            556679999999999865        34699999999777 9999998754                    588999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+..+      
T Consensus       135 i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~------  206 (335)
T 3dls_A          135 IFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPY------  206 (335)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCB------
T ss_pred             HHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCC--ceeccCCCccccChhhhcCCCC------
Confidence            99999999999999999999999999999999999999999998765443  2345679999999999976432      


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                     ++.++|||||||++|||++|..|+.......                    ......+...++++
T Consensus       207 ---------------~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------------------~~~~~~~~~~~~~l  251 (335)
T 3dls_A          207 ---------------RGPELEMWSLGVTLYTLVFEENPFCELEETV--------------------EAAIHPPYLVSKEL  251 (335)
T ss_dssp             ---------------CSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT--------------------TTCCCCSSCCCHHH
T ss_pred             ---------------CCCcccchhHHHHHHHHHhCCCchhhHHHHH--------------------hhccCCCcccCHHH
Confidence                           1356799999999999999999875422111                    11122334478999


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      .+|+.+||+   .||++|||++++++||||+....
T Consensus       252 ~~li~~~L~---~dP~~Rps~~ell~hp~~~~~~~  283 (335)
T 3dls_A          252 MSLVSGLLQ---PVPERRTTLEKLVTDPWVTQPVN  283 (335)
T ss_dssp             HHHHHHHTC---SSGGGSCCHHHHHHCTTTTCCCC
T ss_pred             HHHHHHHcc---CChhhCcCHHHHhcCccccCCcc
Confidence            999999999   77799999999999999986443


No 78 
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.4e-43  Score=365.99  Aligned_cols=279  Identities=18%  Similarity=0.226  Sum_probs=203.0

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||+||+|++..+|+.||+|++.....        ...+|.                        
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~------------------------   51 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNREL------------------------   51 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHH------------------------
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHH------------------------
Confidence            456789999999999999999999999999999998865321        011122                        


Q ss_pred             HHhhhcCCccccccccccccccCCc------------------------------cccCCceEEEEeecCCCcHHHHHHh
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNS------------------------------QFTKGGKWLVWKFEGDRTLADYMKD  263 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~------------------------------~~~~~~~~LV~e~~~~gsL~~~l~~  263 (502)
                      ..+..+.|+||++++++|.......                              .......++||||++ |+|.+.+..
T Consensus        52 ~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  130 (383)
T 3eb0_A           52 DIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKS  130 (383)
T ss_dssp             HHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHH
T ss_pred             HHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHH
Confidence            2345557999999999986542210                              012334889999996 698888875


Q ss_pred             cCCCCcchhhhccccccCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEeeccccccccC
Q 039267          264 RTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLT-KRGQIKLIDFGAATDLRI  342 (502)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~-~~~~~kL~DFGla~~~~~  342 (502)
                      ..                .....+++..++.++.||++||+|||++||+||||||+|||++ .++.+||+|||+|+....
T Consensus       131 ~~----------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  194 (383)
T 3eb0_A          131 FI----------------RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP  194 (383)
T ss_dssp             HH----------------HTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             HH----------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC
Confidence            31                0123688999999999999999999999999999999999998 689999999999997654


Q ss_pred             CCccCCCcccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhh
Q 039267          343 GKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNF  420 (502)
Q Consensus       343 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~  420 (502)
                      ..  ......+|+.|+|||++.+..                     .++.++||||+||++|||++|..|+....  ..+
T Consensus       195 ~~--~~~~~~~t~~y~aPE~~~~~~---------------------~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  251 (383)
T 3eb0_A          195 SE--PSVAYICSRFYRAPELMLGAT---------------------EYTPSIDLWSIGCVFGELILGKPLFSGETSIDQL  251 (383)
T ss_dssp             TS--CCCCCCCCSSCCCHHHHTTCS---------------------SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CC--CCcCcccCCCccCHHHhcCCC---------------------CCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHH
Confidence            43  234557899999999987532                     35567899999999999999988875443  233


Q ss_pred             HHHHHhhccChH-HHHHhhhccCc------------cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          421 NMEIKTAQYDLN-KWREYTRLRSD------------FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       421 ~~~~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      ...++..+.... .+.........            .......+.++.+|+.+||+   +||++|||++|+++||||+..
T Consensus       252 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          252 VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR---YEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC---SSGGGSCCHHHHHTSGGGHHH
T ss_pred             HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHcc---CChhhCCCHHHHhcCHHHHHH
Confidence            334443333322 22222111000            01234578899999999999   777999999999999999854


No 79 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=3.1e-44  Score=365.80  Aligned_cols=259  Identities=19%  Similarity=0.253  Sum_probs=198.2

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++..+|+.||+|++.+...        ..                       .++....
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~-----------------------~~E~~~l   69 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DP-----------------------TEEIEIL   69 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CC-----------------------HHHHHHH
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------Ch-----------------------HHHHHHH
Confidence            4579999999999999999999999999999999875321        00                       0111122


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      .....||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++.+
T Consensus        70 ~~~~~hp~iv~~~~~~~~--------~~~~~lv~E~~~gg~L~~~i~~~~--------------------~~~~~~~~~~  121 (342)
T 2qr7_A           70 LRYGQHPNIITLKDVYDD--------GKYVYVVTELMKGGELLDKILRQK--------------------FFSEREASAV  121 (342)
T ss_dssp             HHHTTSTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHTCT--------------------TCCHHHHHHH
T ss_pred             HHhcCCCCcCeEEEEEEc--------CCEEEEEEeCCCCCcHHHHHHHcC--------------------CCCHHHHHHH
Confidence            223369999999999865        346999999999999999998654                    5789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccC----CcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKR----GQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~----~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      +.||+.||+|||++||+||||||+|||+..+    +.+||+|||+++....... ......||+.|+|||++.+.     
T Consensus       122 ~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----  195 (342)
T 2qr7_A          122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG-LLMTPCYTANFVAPEVLERQ-----  195 (342)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-CBCCSSCCSSCCCHHHHHHH-----
T ss_pred             HHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-ceeccCCCccccCHHHhcCC-----
Confidence            9999999999999999999999999998543    3599999999997654432 23456789999999998642     


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh-hHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN-FNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                       .++.++|||||||++|||++|..|+...... .........        ..........+...
T Consensus       196 -----------------~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~--------~~~~~~~~~~~~~~  250 (342)
T 2qr7_A          196 -----------------GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG--------SGKFSLSGGYWNSV  250 (342)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH--------HCCCCCCSTTTTTS
T ss_pred             -----------------CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc--------cCCcccCccccccC
Confidence                             2445789999999999999999887653221 111111110        00001111234567


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      ++++.+|+.+||+   .||++|||++++++||||...
T Consensus       251 s~~~~~li~~~L~---~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          251 SDTAKDLVSKMLH---VDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             CHHHHHHHHHHTC---SSTTTSCCHHHHTTSHHHHTG
T ss_pred             CHHHHHHHHHHCC---CChhHCcCHHHHhcCCeecCc
Confidence            9999999999999   777999999999999999753


No 80 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-43  Score=364.84  Aligned_cols=278  Identities=24%  Similarity=0.277  Sum_probs=200.0

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++..+|+.||||++.....                         ........ ..+...
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~~-~~E~~~   77 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-------------------------SELFAKRA-YRELRL   77 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-------------------------SHHHHHHH-HHHHHH
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-------------------------CHHHHHHH-HHHHHH
Confidence            4679999999999999999999988999999988754211                         00000111 112233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++.......  .....++||||+ +++|.+++...                     .+++..++.+
T Consensus        78 l~~l~hpnIv~l~~~~~~~~~~~--~~~~~~lv~e~~-~~~L~~~~~~~---------------------~l~~~~~~~~  133 (367)
T 1cm8_A           78 LKHMRHENVIGLLDVFTPDETLD--DFTDFYLVMPFM-GTDLGKLMKHE---------------------KLGEDRIQFL  133 (367)
T ss_dssp             HHHCCBTTBCCCSEEECSCSSTT--TCCCCEEEEECC-SEEHHHHHHHC---------------------CCCHHHHHHH
T ss_pred             HHhCCCcCCCCceeeEecCCccc--cCceEEEEEecC-CCCHHHHHhcC---------------------CCCHHHHHHH
Confidence            56667999999999987653211  123479999999 89999999864                     4788899999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....    .....+|+.|+|||++.+.         
T Consensus       134 ~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~---------  200 (367)
T 1cm8_A          134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNW---------  200 (367)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS----CCSSCSCGGGCCTHHHHTT---------
T ss_pred             HHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc----cCcCcCCCCcCCHHHHhCC---------
Confidence            999999999999999999999999999999999999999999875432    3455789999999998752         


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhhHHHHHhhccChHHHHH---------hhhccC--
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNFNMEIKTAQYDLNKWRE---------YTRLRS--  442 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~--  442 (502)
                                  ..++.++||||+||+++||++|..|+....  ..+..+....+.....+..         .....+  
T Consensus       201 ------------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  268 (367)
T 1cm8_A          201 ------------MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL  268 (367)
T ss_dssp             ------------TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred             ------------CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCC
Confidence                        235567899999999999999988875443  2333333433333222211         000000  


Q ss_pred             ---c-cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          443 ---D-FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       443 ---~-~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                         . .......++++.+|+.+||+   .||++|||++|+|+||||+...+..
T Consensus       269 ~~~~~~~~~~~~~~~~~~ll~~mL~---~dP~~R~t~~e~l~hp~f~~~~~~~  318 (367)
T 1cm8_A          269 EKKDFASILTNASPLAVNLLEKMLV---LDAEQRVTAGEALAHPYFESLHDTE  318 (367)
T ss_dssp             CCCCGGGTCTTCCHHHHHHHHHHSC---SSTTTSCCHHHHHHSGGGTTTC---
T ss_pred             CCCCHHHHCCCCCHHHHHHHHHHcc---CChhHCCCHHHHhcChHHHhhcCCc
Confidence               1 12345678999999999999   7779999999999999999766544


No 81 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=3.6e-44  Score=352.48  Aligned_cols=260  Identities=21%  Similarity=0.250  Sum_probs=182.5

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.+.||+|+||.||+|++..+|+.||+|++.......                         .........+..
T Consensus        11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~e~~   65 (275)
T 2eue_A           11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK-------------------------SDMQGRIEREIS   65 (275)
T ss_dssp             BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC------------------------------CHHHHHHHHH
T ss_pred             cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch-------------------------HHHHHHHHHHHH
Confidence            3467999999999999999999998899999999887532110                         000111112223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++..        .+..++||||+ +++|.+++...+                    .+++..++.
T Consensus        66 ~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~-~~~l~~~~~~~~--------------------~~~~~~~~~  116 (275)
T 2eue_A           66 YLRLLRHPHIIKLYDVIKS--------KDEIIMVIEYA-GNELFDYIVQRD--------------------KMSEQEARR  116 (275)
T ss_dssp             HHHHCCCTTBCCEEEEEEC--------SSCEEEEEECC-CEEHHHHHHTSS--------------------SCCHHHHHH
T ss_pred             HHHhCCCCCeEEEEEEEec--------CCeEEEEehhc-CCcHHHHHHhcC--------------------CCCHHHHHH
Confidence            4566789999999999865        34699999999 789999887653                    578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+...      
T Consensus       117 ~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~------  188 (275)
T 2eue_A          117 FFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKLY------  188 (275)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-----------------CTTCCHHHHCC---------
T ss_pred             HHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc--cccCCCCCcCcCCceeeeCCCC------
Confidence            99999999999999999999999999999999999999999998765433  2244578999999999875332      


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                     .+.++||||||+++|||++|..|+...........            ...  .....+...++++
T Consensus       189 ---------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~  239 (275)
T 2eue_A          189 ---------------AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN------------ISN--GVYTLPKFLSPGA  239 (275)
T ss_dssp             -----------------THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------------HHH--TCCCCCTTSCHHH
T ss_pred             ---------------CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH------------HHh--CCCCCCccCCHHH
Confidence                           23568999999999999999998755432221111            000  1123345578999


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      .+|+.+||+   .||++|||++|+++||||+..-
T Consensus       240 ~~li~~~l~---~dP~~Rps~~e~l~h~~f~~~~  270 (275)
T 2eue_A          240 AGLIKRMLI---VNPLNRISIHEIMQDDWFKVDL  270 (275)
T ss_dssp             HHHHHHHSC---SSGGGSCCHHHHTTCHHHHTTC
T ss_pred             HHHHHHHhh---cCHhHCCCHHHHhhCCeecccc
Confidence            999999999   7779999999999999999643


No 82 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.6e-43  Score=356.27  Aligned_cols=268  Identities=22%  Similarity=0.313  Sum_probs=205.3

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||.||+|+...+|+.||+|++.........                     .......+. .+...
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---------------------~~~~~~~~~-~E~~~   68 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR---------------------RGVSREEIE-REVSI   68 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS---------------------SSBCHHHHH-HHHHH
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc---------------------cchhHHHHH-HHHHH
Confidence            35699999999999999999999889999999998864321100                     000001111 12233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..        .+..++||||+++++|.+++...+                    .+++..++.+
T Consensus        69 l~~l~h~~iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~i  120 (321)
T 2a2a_A           69 LRQVLHHNVITLHDVYEN--------RTDVVLILELVSGGELFDFLAQKE--------------------SLSEEEATSF  120 (321)
T ss_dssp             HHHCCCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHTCS--------------------CEEHHHHHHH
T ss_pred             HHhCCCCCcceEEEEEec--------CCEEEEEEEcCCCCcHHHHHHhcC--------------------CCCHHHHHHH
Confidence            566789999999999865        346999999999999999998653                    5789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRG----QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~----~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      +.|++.||+|||+++|+||||||+|||++.++    .+||+|||+++......  ......||+.|+|||++.+..    
T Consensus       121 ~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----  194 (321)
T 2a2a_A          121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEP----  194 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCC----
T ss_pred             HHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc--cccccCCCCCccCcccccCCC----
Confidence            99999999999999999999999999999888    89999999998765433  234567899999999987543    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH-HHHhhccChHHHHHhhhccCccccccCC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM-EIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                        ++.++||||||+++|||++|..|+......... .+.......           ....+...
T Consensus       195 ------------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~  245 (321)
T 2a2a_A          195 ------------------LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF-----------DEEFFSHT  245 (321)
T ss_dssp             ------------------CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC-----------CHHHHTTC
T ss_pred             ------------------CCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccccc-----------Chhhhccc
Confidence                              445779999999999999999887654322111 111111110           11123456


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      ++.+.+|+.+||+   .||++|||++|+++||||+....+.
T Consensus       246 ~~~~~~li~~~l~---~dp~~Rps~~e~l~hp~~~~~~~~~  283 (321)
T 2a2a_A          246 SELAKDFIRKLLV---KETRKRLTIQEALRHPWITPVDNQQ  283 (321)
T ss_dssp             CHHHHHHHHTTSC---SSTTTSCCHHHHHHSTTTSCSSHHH
T ss_pred             CHHHHHHHHHHcC---CChhhCcCHHHHhcCccccCCCccc
Confidence            8899999999999   7779999999999999999765544


No 83 
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=2.3e-43  Score=362.30  Aligned_cols=269  Identities=22%  Similarity=0.287  Sum_probs=203.3

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc-hhhHHHHHHH
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF-GDYEEWFNYR  215 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~-~~~~~~~~~~  215 (502)
                      ++|.+.+.||+|+||.||+|++..+|+.||||++..........                    ...+. ..+..+. ..
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~--------------------~~~~~~~~~~~E~-~~  152 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE--------------------QLEEVREATRRET-HI  152 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHH--------------------HHHHHHHHHHHHH-HH
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHH--------------------HHHHHHHHHHHHH-HH
Confidence            56999999999999999999998899999999887643210000                    00011 1111111 22


Q ss_pred             hhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          216 LSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       216 l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      +..+ .||||+++++++..        .+..++||||+++++|.+++....                    .+++..++.
T Consensus       153 l~~l~~hp~iv~~~~~~~~--------~~~~~lv~e~~~g~~L~~~l~~~~--------------------~l~~~~~~~  204 (365)
T 2y7j_A          153 LRQVAGHPHIITLIDSYES--------SSFMFLVFDLMRKGELFDYLTEKV--------------------ALSEKETRS  204 (365)
T ss_dssp             HHHHTTCTTBCCEEEEEEB--------SSEEEEEECCCTTCBHHHHHHHHS--------------------SCCHHHHHH
T ss_pred             HHHhcCCCCEeEEEEEEee--------CCEEEEEEEeCCCCcHHHHHHhcC--------------------CCCHHHHHH
Confidence            3344 79999999998865        346999999999999999998653                    578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+....  ......||+.|+|||++.+.....    
T Consensus       205 i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~----  278 (365)
T 2y7j_A          205 IMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDET----  278 (365)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTT----
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCc--ccccCCCCCCccChhhcccccccc----
Confidence            99999999999999999999999999999999999999999998765443  234567999999999987543221    


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH-HHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM-EIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                  ...++.++|||||||++|||++|..|+......... .+......           ...+.+...+.+
T Consensus       279 ------------~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~  335 (365)
T 2y7j_A          279 ------------HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ-----------FSSPEWDDRSST  335 (365)
T ss_dssp             ------------SCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-----------CCHHHHSSSCHH
T ss_pred             ------------CcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-----------CCCcccccCCHH
Confidence                        124567889999999999999999987654332211 11111111           111223456889


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      +.+|+.+||+   .||++|||++++++||||++
T Consensus       336 ~~~li~~~L~---~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          336 VKDLISRLLQ---VDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHHHHHHSC---SSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHHHcC---CChhHCcCHHHHhcCcccCC
Confidence            9999999999   77799999999999999974


No 84 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=4.1e-44  Score=363.39  Aligned_cols=291  Identities=19%  Similarity=0.235  Sum_probs=200.9

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||+||+|+...+++.||+|++.......                      ........+.+ +...
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~~~~~~~~~~-E~~~   81 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ----------------------INPKDVERIKT-EVRL   81 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC-------------------------CHHHHHHH-HHHH
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcc----------------------cCHHHHHHHHH-HHHH
Confidence            467999999999999999999998899999999887532100                      00001111111 2233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhh------------------hccc
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETY------------------MFGR  277 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~------------------~~~~  277 (502)
                      +..+.||||+++++++..        .+..++||||+++|+|.+++............                  ..+.
T Consensus        82 l~~l~hpniv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (345)
T 3hko_A           82 MKKLHHPNIARLYEVYED--------EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS  153 (345)
T ss_dssp             HHHCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSC
T ss_pred             HHhCCCCCcceeehhhcc--------CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccc
Confidence            566679999999999865        34699999999999999999632100000000                  0000


Q ss_pred             c--ccCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC--cEEEeeccccccccCC---CccCCCc
Q 039267          278 V--LEGEDSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG--QIKLIDFGAATDLRIG---KNYVPNR  350 (502)
Q Consensus       278 ~--~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~--~~kL~DFGla~~~~~~---~~~~~~~  350 (502)
                      .  ........+++..++.++.||+.||+|||+.+|+||||||+|||++.++  .+||+|||+++.....   .......
T Consensus       154 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  233 (345)
T 3hko_A          154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT  233 (345)
T ss_dssp             C--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-------
T ss_pred             cccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccc
Confidence            0  0001122457788999999999999999999999999999999998776  8999999999876432   2223456


Q ss_pred             ccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccC
Q 039267          351 TLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYD  430 (502)
Q Consensus       351 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~  430 (502)
                      ..||+.|+|||++.+..                    ..++.++|||||||++|||++|..|+................ 
T Consensus       234 ~~gt~~y~aPE~~~~~~--------------------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-  292 (345)
T 3hko_A          234 KAGTPYFVAPEVLNTTN--------------------ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK-  292 (345)
T ss_dssp             -CCCGGGCCHHHHTCSS--------------------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-
T ss_pred             cCCCccccCchhhccCC--------------------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcc-
Confidence            67999999999986421                    235567899999999999999999875543322111111100 


Q ss_pred             hHHHHHhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          431 LNKWREYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                               .....+.....++++.+|+.+||+   .||.+|||++++++||||+...++
T Consensus       293 ---------~~~~~~~~~~~~~~~~~li~~~l~---~~p~~Rps~~~~l~hp~~~~~~~~  340 (345)
T 3hko_A          293 ---------LCFENPNYNVLSPLARDLLSNLLN---RNVDERFDAMRALQHPWISQFSDK  340 (345)
T ss_dssp             ---------CCTTSGGGGGSCHHHHHHHHHHSC---SCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred             ---------cccCCcccccCCHHHHHHHHHHcC---CChhHCCCHHHHhcChhhccChHh
Confidence                     011112233468999999999999   777999999999999999976543


No 85 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=6.1e-44  Score=378.85  Aligned_cols=261  Identities=20%  Similarity=0.255  Sum_probs=204.9

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+++.||+|+||.||+|++..+|+.||||++......           .             ......+. .+
T Consensus        12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~-----------~-------------~~~~~~~~-~E   66 (476)
T 2y94_A           12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR-----------S-------------LDVVGKIR-RE   66 (476)
T ss_dssp             CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH-----------H-------------TTTHHHHH-HH
T ss_pred             CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-----------C-------------HHHHHHHH-HH
Confidence            35667899999999999999999999889999999988752110           0             00001111 11


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++...        +..++||||+++|+|.+++...+                    .+++..+
T Consensus        67 i~~l~~l~HpnIv~l~~~~~~~--------~~~~lv~E~~~gg~L~~~l~~~~--------------------~l~~~~~  118 (476)
T 2y94_A           67 IQNLKLFRHPHIIKLYQVISTP--------SDIFMVMEYVSGGELFDYICKNG--------------------RLDEKES  118 (476)
T ss_dssp             HHHHTTCCCTTBCCEEEEEECS--------SEEEEEEECCSSEEHHHHTTSSS--------------------SCCHHHH
T ss_pred             HHHHHhCCCCCCCcEEEEEEEC--------CEEEEEEeCCCCCcHHHHHHhcC--------------------CCCHHHH
Confidence            2235667799999999998653        46999999999999999997653                    5889999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....+.  .....+||+.|+|||++.+..+    
T Consensus       119 ~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~----  192 (476)
T 2y94_A          119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAAPEVISGRLY----  192 (476)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--CBCCCCSCSTTCCHHHHTTCCB----
T ss_pred             HHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc--cccccCCCcCeEChhhccCCCC----
Confidence            9999999999999999999999999999999999999999999999765443  2345679999999999976432    


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                       .+.++|||||||++|||++|..|+........ ..+..               .....+...+
T Consensus       193 -----------------~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~---------------~~~~~p~~~s  240 (476)
T 2y94_A          193 -----------------AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD---------------GIFYTPQYLN  240 (476)
T ss_dssp             -----------------CSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT---------------TCCCCCTTCC
T ss_pred             -----------------CCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc---------------CCcCCCccCC
Confidence                             23467999999999999999998764432211 11111               1122344578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      +++.+|+.+||+   .||.+|||++++++||||+..
T Consensus       241 ~~~~~Li~~~L~---~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          241 PSVISLLKHMLQ---VDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HHHHHHHHHHTC---SSTTTSCCHHHHHTCHHHHTT
T ss_pred             HHHHHHHHHHcC---CCchhCcCHHHHHhCHHhhhc
Confidence            999999999999   777999999999999999864


No 86 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.8e-43  Score=347.71  Aligned_cols=259  Identities=17%  Similarity=0.231  Sum_probs=200.8

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||.||+|++..++..||+|.+.......    .+                       .+. .+...+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~----~~-----------------------~~~-~E~~~l   60 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED----VD-----------------------RFK-QEIEIM   60 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC----HH-----------------------HHH-HHHHHH
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch----HH-----------------------HHH-HHHHHH
Confidence            46999999999999999999998888889998876532210    00                       111 112235


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++..        .+..++||||+++++|.+++...+                    .+++..++.++
T Consensus        61 ~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~--------------------~~~~~~~~~i~  112 (277)
T 3f3z_A           61 KSLDHPNIIRLYETFED--------NTDIYLVMELCTGGELFERVVHKR--------------------VFRESDAARIM  112 (277)
T ss_dssp             HTCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHC--------------------SCCHHHHHHHH
T ss_pred             HhCCCCCEeeEEEEEec--------CCeEEEEEeccCCCcHHHHHHHcC--------------------CCCHHHHHHHH
Confidence            56679999999999865        346999999999999999998764                    57899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVL---TKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .|++.||+|||+++|+||||||+|||+   +.++.+||+|||+++......  ......||+.|+|||++.+.       
T Consensus       113 ~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~-------  183 (277)
T 3f3z_A          113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKVGTPYYVSPQVLEGL-------  183 (277)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTTC-------
T ss_pred             HHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc--chhccCCCCCccChHHhccc-------
Confidence            999999999999999999999999999   788999999999998765443  23455799999999988642       


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH-HHHhhccChHHHHHhhhccCccccccCCch
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM-EIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                      ++.++||||||+++|||++|..|+......... .+.......+           ...+...++
T Consensus       184 ----------------~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  236 (277)
T 3f3z_A          184 ----------------YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP-----------EKDWLNVSP  236 (277)
T ss_dssp             ----------------BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----------HHHHTTSCH
T ss_pred             ----------------CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-----------chhhhcCCH
Confidence                            345679999999999999999887654432221 1111111110           111224688


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      ++.+|+.+||+   .||++|||+.++++||||+.....
T Consensus       237 ~~~~li~~~l~---~dp~~R~s~~~~l~h~~~~~~~~~  271 (277)
T 3f3z_A          237 QAESLIRRLLT---KSPKQRITSLQALEHEWFEKQLSS  271 (277)
T ss_dssp             HHHHHHHHHTC---SSTTTSCCHHHHTTSHHHHHHHCC
T ss_pred             HHHHHHHHHcc---CChhhCcCHHHHhcCHHHhccccc
Confidence            99999999999   777999999999999999864443


No 87 
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=6.5e-44  Score=360.70  Aligned_cols=276  Identities=21%  Similarity=0.213  Sum_probs=200.9

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|++.+.||+|+||.||+|+...+|+.||+|++......                          ...........
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~E~   75 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD--------------------------KMVKKIAMREI   75 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSC--------------------------HHHHHHHHHHH
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCc--------------------------hHHHHHHHHHH
Confidence            3456899999999999999999999888999999887653210                          00001111122


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+++++|.+++...+                    .+++..+.
T Consensus        76 ~~l~~l~h~~iv~~~~~~~~--------~~~~~lv~e~~~~~~l~~~~~~~~--------------------~~~~~~~~  127 (331)
T 4aaa_A           76 KLLKQLRHENLVNLLEVCKK--------KKRWYLVFEFVDHTILDDLELFPN--------------------GLDYQVVQ  127 (331)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--------TTEEEEEEECCSEEHHHHHHHSTT--------------------CCCHHHHH
T ss_pred             HHHhhCCCCCEeeEEEEeec--------CCEEEEEEecCCcchHHHHHhhcc--------------------CCCHHHHH
Confidence            34566679999999999875        346999999999999988876543                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.       
T Consensus       128 ~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~-------  199 (331)
T 4aaa_A          128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-VYDDEVATRWYRAPELLVGD-------  199 (331)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------------CCCCCTTCCHHHHTTC-------
T ss_pred             HHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-ccCCCcCCccccCcccccCC-------
Confidence            9999999999999999999999999999999999999999999987654322 23455789999999998653       


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhccChHHHHHhhhccC---------
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQYDLNKWREYTRLRS---------  442 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---------  442 (502)
                                    ..++.++|||||||++|||++|..|+......  ........+...+.+.......+         
T Consensus       200 --------------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (331)
T 4aaa_A          200 --------------VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPE  265 (331)
T ss_dssp             --------------TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCC
T ss_pred             --------------CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCcc
Confidence                          23456789999999999999998887554432  22222222222222221111100         


Q ss_pred             ------ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          443 ------DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       443 ------~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                            .....+..++++.+|+.+||+   .||++|||++|+|+||||+..+
T Consensus       266 ~~~~~~~~~~~~~~~~~l~~li~~~L~---~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          266 IKEREPLERRYPKLSEVVIDLAKKCLH---IDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             CSSCCCHHHHSTTSCHHHHHHHHHHTC---SSGGGSCCGGGGGGSHHHHGGG
T ss_pred             ccccchhhhcccchhHHHHHHHHHHhc---cCcccCCCHHHHhcCchhccCC
Confidence                  011223578999999999999   7779999999999999998654


No 88 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=3.6e-43  Score=365.38  Aligned_cols=261  Identities=18%  Similarity=0.200  Sum_probs=193.3

Q ss_pred             cCCEEEE-eeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          136 RTDFVIG-DKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       136 ~~~~~~~-~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      .++|.+. +.||+|+||+||+|++..+|+.||||++....                                ...+++..
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--------------------------------~~~~E~~~  107 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--------------------------------KARREVEL  107 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH--------------------------------HHHHHHHH
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcch--------------------------------hHHHHHHH
Confidence            3467776 78999999999999998899999998875310                                01112222


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      ......|+||++++++|.....    ..+..+|||||+++|+|.+++...+                  ...+++..++.
T Consensus       108 ~~~~~~hp~iv~l~~~~~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~~------------------~~~l~~~~~~~  165 (400)
T 1nxk_A          108 HWRASQCPHIVRIVDVYENLYA----GRKCLLIVMECLDGGELFSRIQDRG------------------DQAFTEREASE  165 (400)
T ss_dssp             HHHHTTSTTBCCEEEEEEEEET----TEEEEEEEEECCCSEEHHHHHHCC---------------------CCBHHHHHH
T ss_pred             HHHhcCCCCcceEeEEEeeccc----CCcEEEEEEEeCCCCcHHHHHHHhC------------------CCCCCHHHHHH
Confidence            2344579999999998864221    1335899999999999999998653                  12589999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTK---RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      |+.||+.||+|||+++|+||||||+|||++.   ++.+||+|||+++......  .....+||+.|+|||++.+.     
T Consensus       166 i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----  238 (400)
T 1nxk_A          166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPE-----  238 (400)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------CTTCCGGGSCCC-----
T ss_pred             HHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC--ccccCCCCCCccCHhhcCCC-----
Confidence            9999999999999999999999999999997   7899999999998754332  23456789999999998653     


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh-----hHHHHHhhccChHHHHHhhhccCcccc
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN-----FNMEIKTAQYDLNKWREYTRLRSDFTI  446 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (502)
                                       .++.++|||||||++|||++|..|+......     ....+....+.           .....
T Consensus       239 -----------------~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~  290 (400)
T 1nxk_A          239 -----------------KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-----------FPNPE  290 (400)
T ss_dssp             -----------------CSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC-----------CCTTT
T ss_pred             -----------------CCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc-----------CCCcc
Confidence                             3456789999999999999999887644321     11111111111           11123


Q ss_pred             ccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          447 LDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       447 ~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      +..+++++.+||.+||+   .||++|||++|+++||||....
T Consensus       291 ~~~~s~~~~~li~~~L~---~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          291 WSEVSEEVKMLIRNLLK---TEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             TTTSCHHHHHHHHTTSC---SSGGGSCCHHHHHHSHHHHTTT
T ss_pred             cccCCHHHHHHHHHHCC---CChhHCcCHHHHhcCccccCCC
Confidence            35579999999999999   7779999999999999998654


No 89 
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=2.4e-43  Score=368.96  Aligned_cols=278  Identities=22%  Similarity=0.282  Sum_probs=203.2

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ...+|.+.+.||+|+||+||+|++..+|+.||||.+.....        ...+|.                        .
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~------------------------~   99 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNREL------------------------Q   99 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHH------------------------H
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHH------------------------H
Confidence            34579999999999999999999988999999998864211        011122                        2


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.|+||++++++|......  ......++||||++ ++|.+.+....                .....+++..++.
T Consensus       100 il~~l~hpniv~l~~~~~~~~~~--~~~~~~~lv~e~~~-~~l~~~~~~~~----------------~~~~~l~~~~~~~  160 (420)
T 1j1b_A          100 IMRKLDHCNIVRLRYFFYSSGEK--KDEVYLNLVLDYVP-ETVYRVARHYS----------------RAKQTLPVIYVKL  160 (420)
T ss_dssp             HHHTCCCTTBCCEEEEEEEEETT--TTEEEEEEEEECCC-EEHHHHHHHHH----------------HTTCCCCHHHHHH
T ss_pred             HHHHcCCCCccceeeEEeccCCC--CcceeEEeehhccc-ccHHHHHHHHh----------------hccCCCCHHHHHH
Confidence            34556799999999988654321  11223679999996 57777765421                0123688999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-CcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKR-GQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      ++.||++||+|||+++|+||||||+|||++.+ +.+||+|||+++....+..  .....||+.|+|||++.+.       
T Consensus       161 ~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~-------  231 (420)
T 1j1b_A          161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRYYRAPELIFGA-------  231 (420)
T ss_dssp             HHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCTTSCCHHHHTTC-------
T ss_pred             HHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCC--ceeeeeCCCcCCHHHHcCC-------
Confidence            99999999999999999999999999999965 6789999999997654432  2345789999999998652       


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhhHHHHHhhccC-hHHHHHhhhccCccc-----
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNFNMEIKTAQYD-LNKWREYTRLRSDFT-----  445 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----  445 (502)
                                    ..++.++|||||||++|||++|..|+....  ..+..+++..+.. ...|.........+.     
T Consensus       232 --------------~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~  297 (420)
T 1j1b_A          232 --------------TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK  297 (420)
T ss_dssp             --------------SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCC
T ss_pred             --------------CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccC
Confidence                          235567899999999999999988875443  3334444433332 223333221111111     


Q ss_pred             -------cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          446 -------ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       446 -------~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                             .....+.++.+|+.+||+   .||.+|||+.|+++||||+...+
T Consensus       298 ~~~~~~~~~~~~~~~~~~Li~~~L~---~dP~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          298 AHPWTKVFRPRTPPEAIALCSRLLE---YTPTARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             CCCHHHHSCTTSCHHHHHHHHHHSC---SSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             CCCHHHhcCCCCCHHHHHHHHHhcc---CChhHCCCHHHHhCCHhhccccc
Confidence                   123468899999999999   77799999999999999986543


No 90 
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.3e-43  Score=349.04  Aligned_cols=258  Identities=17%  Similarity=0.165  Sum_probs=192.8

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||+||+|++..+++.||+|++......                         .........+... 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~e~~~-   63 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG-------------------------SVDEQNALREVYA-   63 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT-------------------------SHHHHHHHHHHHH-
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc-------------------------cHHHHHHHHHHHH-
Confidence            46799999999999999999999888999999987753221                         0011111122222 


Q ss_pred             hhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          216 LSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       216 l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      +..+ .||||+++++++...        +..++||||+++|+|.+++.....                ....+++..++.
T Consensus        64 ~~~l~~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~  119 (289)
T 1x8b_A           64 HAVLGQHSHVVRYFSAWAED--------DHMLIQNEYCNGGSLADAISENYR----------------IMSYFKEAELKD  119 (289)
T ss_dssp             HHHSCSCTTBCCEEEEEEET--------TEEEEEEECCTTCBHHHHHHHHHH----------------HTCCCCHHHHHH
T ss_pred             HHHhCCCCCeeeeeeeeecC--------CeEEEEEEecCCCcHHHHHHhhcc----------------cccCCCHHHHHH
Confidence            3333 799999999998653        469999999999999999986520                112578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccC-------------------CcEEEeeccccccccCCCccCCCcccCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKR-------------------GQIKLIDFGAATDLRIGKNYVPNRTLLDP  355 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~-------------------~~~kL~DFGla~~~~~~~~~~~~~~~gt~  355 (502)
                      ++.||+.||+|||+++|+||||||+|||++.+                   ..+||+|||+++.....     ....||+
T Consensus       120 i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~  194 (289)
T 1x8b_A          120 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP-----QVEEGDS  194 (289)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS-----CCCCCCG
T ss_pred             HHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc-----cccCCCc
Confidence            99999999999999999999999999999844                   48999999999876533     2345899


Q ss_pred             CcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHH
Q 039267          356 DYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWR  435 (502)
Q Consensus       356 ~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                      .|+|||++.+..                     .++.++|||||||++|||++|..++.... ...... ..        
T Consensus       195 ~y~aPE~~~~~~---------------------~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~~~-~~--------  243 (289)
T 1x8b_A          195 RFLANEVLQENY---------------------THLPKADIFALALTVVCAAGAEPLPRNGD-QWHEIR-QG--------  243 (289)
T ss_dssp             GGCCHHHHTTCC---------------------TTHHHHHHHHHHHHHHHHTTCCCCCSSSH-HHHHHH-TT--------
T ss_pred             cccChhHhcCCC---------------------CCCchhhHHHHHHHHHHHhcCCCCCcchh-HHHHHH-cC--------
Confidence            999999987531                     23357899999999999999876543332 111111 10        


Q ss_pred             HhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          436 EYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                            .....+...++++.+|+.+||+   .||++|||++++++||||+...
T Consensus       244 ------~~~~~~~~~~~~~~~li~~~l~---~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          244 ------RLPRIPQVLSQEFTELLKVMIH---PDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             ------CCCCCSSCCCHHHHHHHHHHTC---SSGGGSCCHHHHHTCTTC----
T ss_pred             ------CCCCCCcccCHHHHHHHHHHhC---CCcccCCCHHHHhhChHhhhhc
Confidence                  1112345678999999999999   7779999999999999999653


No 91 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=8.8e-44  Score=361.87  Aligned_cols=274  Identities=19%  Similarity=0.266  Sum_probs=195.0

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||.||+|.. .+++.||||++......                         ......+..+. 
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E~-   58 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEAD-------------------------NQTLDSYRNEI-   58 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCC-------------------------HHHHHHHHHHH-
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccc-------------------------hHHHHHHHHHH-
Confidence            5567899999999999999999987 56788888887653210                         01111111111 


Q ss_pred             HHhhhcCC--ccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          214 YRLSRAAP--ETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       214 ~~l~~~~h--~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ..+..+.|  +||+++++++...        +..++|||+ .+|+|.+++...+                    .+++..
T Consensus        59 ~~l~~l~~~~~~iv~~~~~~~~~--------~~~~lv~e~-~~~~L~~~l~~~~--------------------~~~~~~  109 (343)
T 3dbq_A           59 AYLNKLQQHSDKIIRLYDYEITD--------QYIYMVMEC-GNIDLNSWLKKKK--------------------SIDPWE  109 (343)
T ss_dssp             HHHHHHTTTCTTBCCEEEEEECS--------SEEEEEECC-CSEEHHHHHHHSC--------------------CCCHHH
T ss_pred             HHHHhhhhcCCceEEEeeeEeeC--------CEEEEEEeC-CCCCHHHHHHhcC--------------------CCCHHH
Confidence            12333333  9999999998753        369999995 5899999998764                    578899


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      ++.++.||+.||+|||+++|+||||||+|||++ ++.+||+|||+++........ ......||+.|+|||++.+.....
T Consensus       110 ~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  188 (343)
T 3dbq_A          110 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR  188 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccc
Confidence            999999999999999999999999999999996 678999999999877544322 334567999999999986532211


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                      ..           ..-...++.++|||||||++|||++|..|+............           ..........+...
T Consensus       189 ~~-----------~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  246 (343)
T 3dbq_A          189 EN-----------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-----------IIDPNHEIEFPDIP  246 (343)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH-----------HHCTTSCCCCCCCS
T ss_pred             cc-----------cccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH-----------HhcCCcccCCcccC
Confidence            10           000134667899999999999999999988654433222111           11111223344556


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      +.++.+|+.+||+   .||.+|||++|+++||||+....
T Consensus       247 ~~~l~~li~~~L~---~dp~~Rpt~~e~l~hp~~~~~~~  282 (343)
T 3dbq_A          247 EKDLQDVLKCCLK---RDPKQRISIPELLAHPYVQIQTH  282 (343)
T ss_dssp             CHHHHHHHHHHTC---SSTTTSCCHHHHHTSHHHHSCCC
T ss_pred             CHHHHHHHHHHcC---CChhHCCCHHHHHhCccccccCC
Confidence            7899999999999   77799999999999999985443


No 92 
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.7e-43  Score=371.11  Aligned_cols=278  Identities=18%  Similarity=0.243  Sum_probs=202.1

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ....+|++.+.||+|+||+||+|.+..+++.||||++.....     .......|..+++.++                 
T Consensus        94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~-----~~~~~~~E~~~l~~l~-----------------  151 (429)
T 3kvw_A           94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR-----FHRQAAEEIRILEHLR-----------------  151 (429)
T ss_dssp             EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH-----HHHHHHHHHHHHHHHH-----------------
T ss_pred             cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccc-----hHHHHHHHHHHHHHHh-----------------
Confidence            445679999999999999999999988999999998864210     0011112222222221                 


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                       ......|+||+.+++.+...        +..++||||+ +++|.+++.....                  ..+++..++
T Consensus       152 -~~~~~~~~~iv~~~~~~~~~--------~~~~lv~e~~-~~~L~~~l~~~~~------------------~~~~~~~~~  203 (429)
T 3kvw_A          152 -KQDKDNTMNVIHMLENFTFR--------NHICMTFELL-SMNLYELIKKNKF------------------QGFSLPLVR  203 (429)
T ss_dssp             -TTCTTSCSCBCCEEEEEEET--------TEEEEEECCC-CCBHHHHHHHTTT------------------CCCCHHHHH
T ss_pred             -hccccCCcCEEEEEeecccC--------CeEEEEEecc-CCCHHHHHHhccC------------------CCCCHHHHH
Confidence             12234789999999988763        4699999999 4799999987641                  247899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc--EEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ--IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~--~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.  +||+|||+++.....    .....||+.|+|||++.+..    
T Consensus       204 ~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----  275 (429)
T 3kvw_A          204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR----VYTYIQSRFYRAPEVILGAR----  275 (429)
T ss_dssp             HHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHHTBC----
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc----ccccCCCCCccChHHHhCCC----
Confidence            99999999999999999999999999999999987  999999999864432    23557899999999998643    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHHHHHhhhccC-------
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNKWREYTRLRS-------  442 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------  442 (502)
                                        ++.++|||||||++|||++|..|+.....  .+.......+.....|........       
T Consensus       276 ------------------~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~  337 (429)
T 3kvw_A          276 ------------------YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKG  337 (429)
T ss_dssp             ------------------CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTS
T ss_pred             ------------------CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCC
Confidence                              44677999999999999999877654432  333334444444333322110000       


Q ss_pred             -------------------------c-----------cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          443 -------------------------D-----------FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       443 -------------------------~-----------~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                                               .           .......++++.+||.+||+   +||++|||++|+|+||||+.
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~---~dP~~Rpta~e~L~Hpw~~~  414 (429)
T 3kvw_A          338 YPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE---WDPAVRMTPGQALRHPWLRR  414 (429)
T ss_dssp             CBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTC---SSTTTSCCHHHHHTSTTTC-
T ss_pred             CcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCC---CChhhCCCHHHHhCChhhcc
Confidence                                     0           00112347889999999999   88899999999999999997


Q ss_pred             CCCc
Q 039267          487 GGDQ  490 (502)
Q Consensus       487 ~~~~  490 (502)
                      ....
T Consensus       415 ~~~~  418 (429)
T 3kvw_A          415 RLPK  418 (429)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            6543


No 93 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=3.7e-43  Score=360.18  Aligned_cols=281  Identities=20%  Similarity=0.199  Sum_probs=206.3

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||.||+|++..+++.||+|++......                          .....+. .+...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------------------------~~~~~~~-~E~~~   78 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--------------------------TYCQRTL-REIKI   78 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCH--------------------------HHHHHHH-HHHHH
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCc--------------------------HHHHHHH-HHHHH
Confidence            36799999999999999999999888888988887642110                          0000111 11233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++.....   ......++||||++ |+|.+++...                     .+++..++.+
T Consensus        79 l~~l~h~niv~~~~~~~~~~~---~~~~~~~iv~e~~~-~~L~~~l~~~---------------------~~~~~~~~~i  133 (364)
T 3qyz_A           79 LLRFRHENIIGINDIIRAPTI---EQMKDVYIVQDLME-TDLYKLLKTQ---------------------HLSNDHICYF  133 (364)
T ss_dssp             HHHCCCTTBCCCCEEECCSST---TTCCCEEEEEECCS-EEHHHHHHHC---------------------CCCHHHHHHH
T ss_pred             HHhcCCCCCccceeEEecCCc---cccceEEEEEcccC-cCHHHHHHhC---------------------CCCHHHHHHH
Confidence            556679999999998865431   11345899999995 7999999764                     4788999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||+++........  ......||+.|+|||++.+..      
T Consensus       134 ~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------  207 (364)
T 3qyz_A          134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK------  207 (364)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBC------
T ss_pred             HHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCC------
Confidence            999999999999999999999999999999999999999999876543322  234568999999999876432      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhhHHHHHhhccChHH-HHH---------hhhcc
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNFNMEIKTAQYDLNK-WRE---------YTRLR  441 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~~~~~~~~~~~~~~-~~~---------~~~~~  441 (502)
                                     .++.++|||||||++|||++|..|+....  ..........+..... +..         .....
T Consensus       208 ---------------~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (364)
T 3qyz_A          208 ---------------GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP  272 (364)
T ss_dssp             ---------------SCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred             ---------------CCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcC
Confidence                           34567899999999999999988775443  2233333222222111 110         00000


Q ss_pred             C-----ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchh
Q 039267          442 S-----DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAA  492 (502)
Q Consensus       442 ~-----~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~  492 (502)
                      .     .....+..+.++.+|+.+||+   .||++|||++|+|+||||+...++..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~R~t~~e~l~hp~~~~~~~~~~  325 (364)
T 3qyz_A          273 HKNKVPWNRLFPNADSKALDLLDKMLT---FNPHKRIEVEQALAHPYLEQYYDPSD  325 (364)
T ss_dssp             CCCCCCHHHHCTTSCHHHHHHHHHHTC---SSTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred             CccCCCHHHhCCCCCHHHHHHHHHHcC---CChhhCCCHHHHhcCcchhhccCccc
Confidence            0     011234578999999999999   77799999999999999998765543


No 94 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.2e-43  Score=377.83  Aligned_cols=261  Identities=21%  Similarity=0.262  Sum_probs=201.3

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++.+......                         ....+. .+...+
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------~~~~~~-~E~~~l   75 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-------------------------DTSTIL-REVELL   75 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCS-------------------------CHHHHH-HHHHHH
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccch-------------------------HHHHHH-HHHHHH
Confidence            579999999999999999999988999999998875321000                         000111 112235


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++.++
T Consensus        76 ~~l~hpniv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~--------------------~~~~~~~~~i~  127 (486)
T 3mwu_A           76 KKLDHPNIMKLFEILED--------SSSFYIVGELYTGGELFDEIIKRK--------------------RFSEHDAARII  127 (486)
T ss_dssp             HHCCCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHHS--------------------SCCHHHHHHHH
T ss_pred             HhCCCCCcCeEEEEEEc--------CCEEEEEEEcCCCCcHHHHHHhcC--------------------CCCHHHHHHHH
Confidence            56679999999999865        346999999999999999998764                    57899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEc---cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLT---KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .||+.||+|||+++|+||||||+|||++   .++.+||+|||+++......  ......||+.|+|||++.+        
T Consensus       128 ~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--------  197 (486)
T 3mwu_A          128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLRG--------  197 (486)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC------CCTTGGGGCCGGGGGS--------
T ss_pred             HHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC--ccCCCcCCCCCCCHHHhCC--------
Confidence            9999999999999999999999999995   55689999999998765433  2345579999999999864        


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                     .++.++|||||||++|+|++|..|+........ ..+....           .....+.+...++
T Consensus       198 ---------------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------~~~~~~~~~~~s~  251 (486)
T 3mwu_A          198 ---------------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK-----------YAFDLPQWRTISD  251 (486)
T ss_dssp             ---------------CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----------CCSCSGGGGGSCH
T ss_pred             ---------------CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------CCCCCcccCCCCH
Confidence                           244578999999999999999998765433211 1111111           1122234456799


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      ++++||.+||+   .||.+|||++++|+||||+.....
T Consensus       252 ~~~~li~~~L~---~dp~~R~t~~~~l~hp~~~~~~~~  286 (486)
T 3mwu_A          252 DAKDLIRKMLT---FHPSLRITATQCLEHPWIQKYSSE  286 (486)
T ss_dssp             HHHHHHHHHTC---SSTTTSCCHHHHHHCHHHHHTCCC
T ss_pred             HHHHHHHHHcC---CChhhCcCHHHHhcCHhhccCccc
Confidence            99999999999   777999999999999999965543


No 95 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=2.6e-43  Score=376.17  Aligned_cols=260  Identities=21%  Similarity=0.230  Sum_probs=198.2

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.+.||+|+||+||+|++..++..||+|++.+......                         ....+. .+..
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------------------------~~~~~~-~E~~   88 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-------------------------SNSKLL-EEVA   88 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C-------------------------TTHHHH-HHHH
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-------------------------HHHHHH-HHHH
Confidence            34579999999999999999999998999999999876332100                         000111 1123


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||++++++|..        .+..++||||+++|+|.+++....                    .+++..++.
T Consensus        89 ~l~~l~hpniv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~~~~~~--------------------~~~~~~~~~  140 (494)
T 3lij_A           89 VLKLLDHPNIMKLYDFFED--------KRNYYLVMECYKGGELFDEIIHRM--------------------KFNEVDAAV  140 (494)
T ss_dssp             HHTTCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHS--------------------SCCHHHHHH
T ss_pred             HHHhCCCCCCCeEEEEEEe--------CCEEEEEEecCCCCcHHHHHHHcC--------------------CCCHHHHHH
Confidence            3566779999999999865        346999999999999999998764                    578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTK---RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.||+.||+|||+++|+||||||+|||++.   ++.+||+|||+++......  ......||+.|+|||++..      
T Consensus       141 i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~l~~------  212 (494)
T 3lij_A          141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK--KMKERLGTAYYIAPEVLRK------  212 (494)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB--CBCCCCSCTTTCCHHHHTT------
T ss_pred             HHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc--cccccCCCcCeeCHHHHcc------
Confidence            9999999999999999999999999999976   4569999999998765443  2345679999999998853      


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                       .++.++||||+||++|+|++|..|+........ ..+....+           ....+.+...
T Consensus       213 -----------------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------~~~~~~~~~~  264 (494)
T 3lij_A          213 -----------------KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY-----------TFDSPEWKNV  264 (494)
T ss_dssp             -----------------CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-----------CCCSGGGTTS
T ss_pred             -----------------cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----------CCCchhcccC
Confidence                             245678999999999999999988765433211 11111111           1122234567


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      ++++++|+.+||+   .||.+|||++++|+||||+..
T Consensus       265 s~~~~~li~~~L~---~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          265 SEGAKDLIKQMLQ---FDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             CHHHHHHHHHHTC---SSTTTSCCHHHHHTCHHHHHH
T ss_pred             CHHHHHHHHHHCC---CChhhCccHHHHhcCcccccC
Confidence            8999999999999   777999999999999999854


No 96 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.4e-42  Score=371.44  Aligned_cols=274  Identities=19%  Similarity=0.221  Sum_probs=203.7

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|.+.++||+|+||+||+|+...+++.||+|++.+......     ......          ...+........+..
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~----------~~~~~~~~~~~~E~~   98 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKG-----RYSDDN----------KNIEKFHEEIYNEIS   98 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC-------------------------------CTHHHHHHHHH
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccc-----cccccc----------hhhHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999986432100     000000          000111112222233


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++.
T Consensus        99 ~l~~l~hpniv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~--------------------~~~~~~~~~  150 (504)
T 3q5i_A           99 LLKSLDHPNIIKLFDVFED--------KKYFYLVTEFYEGGELFEQIINRH--------------------KFDECDAAN  150 (504)
T ss_dssp             HHHTCCCTTBCCEEEEEEC--------SSEEEEEEECCTTCBHHHHHHHHS--------------------CCCHHHHHH
T ss_pred             HHHhCCCCCCCeEEEEEEc--------CCEEEEEEecCCCCcHHHHHHHcC--------------------CCCHHHHHH
Confidence            4667789999999999865        346999999999999999998764                    588999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG---QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.||+.||+|||+++|+||||||+|||++.++   .+||+|||+++......  ......||+.|+|||++.+      
T Consensus       151 i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~------  222 (504)
T 3q5i_A          151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLKK------  222 (504)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTT------
T ss_pred             HHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhcc------
Confidence            999999999999999999999999999998776   69999999998765433  2345679999999998853      


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh-HHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF-NMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                       .++.++||||+||++|+|++|..|+....... ...+....+.           .....+...
T Consensus       223 -----------------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~  274 (504)
T 3q5i_A          223 -----------------KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY-----------FDFNDWKNI  274 (504)
T ss_dssp             -----------------CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-----------CCHHHHTTS
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-----------CCccccCCC
Confidence                             24467899999999999999998876543322 1112111111           111223457


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      ++++++|+.+||+   .||.+|||++|+|+||||+.....
T Consensus       275 s~~~~~li~~~L~---~dp~~R~t~~e~l~h~~~~~~~~~  311 (504)
T 3q5i_A          275 SDEAKELIKLMLT---YDYNKRCTAEEALNSRWIKKYANN  311 (504)
T ss_dssp             CHHHHHHHHHHTC---SSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred             CHHHHHHHHHHcC---CChhHCCCHHHHhcCHhhhhchhc
Confidence            8999999999999   777999999999999999865543


No 97 
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=2.6e-43  Score=357.24  Aligned_cols=276  Identities=21%  Similarity=0.285  Sum_probs=207.0

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      ..++..++|++.+.||+|+||.||+|+...+|+.||||++......                          ........
T Consensus        45 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~   98 (340)
T 3an0_A           45 NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--------------------------QEQKRLLM   98 (340)
T ss_dssp             CCCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC--------------------------HHHHHHHH
T ss_pred             ceEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc--------------------------HHHHHHHH
Confidence            3467888999999999999999999999888999999887652210                          01111222


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      .....+..+.|+||+++++++...        +..++||||++ |+|.+++....                .....+++.
T Consensus        99 e~~~~~~~~~h~~iv~~~~~~~~~--------~~~~lv~e~~~-~~L~~~l~~~~----------------~~~~~l~~~  153 (340)
T 3an0_A           99 DLDISMRTVDCPFTVTFYGALFRE--------GDVWICMELMD-TSLDKFYKQVI----------------DKGQTIPED  153 (340)
T ss_dssp             HHHHHHTTCCCTTTCCEEEEEECS--------SCEEEEECCCS-EEHHHHHHHHH----------------HTSCCCCHH
T ss_pred             HHHHHHhhcCCCcEEEEeeEEEeC--------CcEEEEHHHhh-CcHHHHHHHHH----------------hcCCCCCHH
Confidence            233346677899999999998763        45999999996 59999987531                012368899


Q ss_pred             HHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDT-GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~-~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      .++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+... 
T Consensus       154 ~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~-  230 (340)
T 3an0_A          154 ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV--AKTIDAGCKPYMAPERINPELN-  230 (340)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH--HHHHSSCCCCCCCHHHHSCCTT-
T ss_pred             HHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceeccccc--ccccCCCCccccCccccccccc-
Confidence            9999999999999999997 99999999999999999999999999998764322  1123468999999999854211 


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccC
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                       ...++.++|||||||++|||++|..|+...............           ..........
T Consensus       231 -----------------~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-----------~~~~~~~~~~  282 (340)
T 3an0_A          231 -----------------QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-----------EPSPQLPADK  282 (340)
T ss_dssp             -----------------CCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-----------SCCCCCCGGG
T ss_pred             -----------------cCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhc-----------CCCCCCCccc
Confidence                             124567889999999999999999987654333222111110           0011111234


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      ++.++.+|+.+||+   .||++|||++++++||||....+..
T Consensus       283 ~~~~~~~li~~~l~---~dp~~Rps~~ell~hp~f~~~~~~~  321 (340)
T 3an0_A          283 FSAEFVDFTSQCLK---KNSKERPTYPELMQHPFFTLHESKG  321 (340)
T ss_dssp             SCHHHHHHHHHHTC---SSGGGSCCHHHHTTSHHHHHHTTSC
T ss_pred             CCHHHHHHHHHHcc---CCcccCcCHHHHhcCcCcccccccc
Confidence            68899999999999   7779999999999999998555444


No 98 
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=2e-43  Score=361.01  Aligned_cols=274  Identities=20%  Similarity=0.204  Sum_probs=203.2

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      .++..++|++.+.||+|+||+||+|++..+|..||+|++.....   ......                        ...
T Consensus        28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~---~~~~~~------------------------~~~   80 (360)
T 3eqc_A           28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK---PAIRNQ------------------------IIR   80 (360)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC---HHHHHH------------------------HHH
T ss_pred             cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC---HHHHHH------------------------HHH
Confidence            45777899999999999999999999988999999998875311   000011                        111


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ....+..+.|+||+++++++...        +..++||||+++|+|.+++...+                    .+++..
T Consensus        81 E~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~  132 (360)
T 3eqc_A           81 ELQVLHECNSPYIVGFYGAFYSD--------GEISICMEHMDGGSLDQVLKKAG--------------------RIPEQI  132 (360)
T ss_dssp             HHGGGGGCCCTTBCCEEEEEEET--------TEEEEEECCCTTCBHHHHHHHHS--------------------SCCHHH
T ss_pred             HHHHHHHCCCCCEEEEeEEEEEC--------CEEEEEEECCCCCCHHHHHHHcC--------------------CCCHHH
Confidence            12235566799999999998763        46999999999999999998764                    578999


Q ss_pred             HHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDT-GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~-~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      +..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....   ......||+.|+|||++.+..   
T Consensus       133 ~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~---  206 (360)
T 3eqc_A          133 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTH---  206 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C----CCCCTTCCHHHHTTCC---
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---cccCCCCCCCeECHHHHcCCC---
Confidence            999999999999999995 9999999999999999999999999999765332   223457899999999997643   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhcc---------------------
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQY---------------------  429 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~---------------------  429 (502)
                                         ++.++|||||||++|||++|..|+................                     
T Consensus       207 -------------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (360)
T 3eqc_A          207 -------------------YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF  267 (360)
T ss_dssp             -------------------CSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred             -------------------CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence                               4456799999999999999998876544322211111000                     


Q ss_pred             --------ChHHH-HHhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          430 --------DLNKW-REYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       430 --------~~~~~-~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                              ..... ................+.++.+|+.+||+   .||++|||++|+++||||+...
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI---KNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHC---SSTTTSCCHHHHHTSHHHHHHH
T ss_pred             ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhh---cChhhCCCHHHHhhChHhhcch
Confidence                    00000 00111111111223468899999999999   7779999999999999999544


No 99 
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=7.5e-43  Score=346.75  Aligned_cols=277  Identities=23%  Similarity=0.323  Sum_probs=203.0

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||.||+|+...+|+.||+|++......                         ......+. .....
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~-~e~~~   55 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-------------------------EGVPSTAI-REISL   55 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------------------------------CCHHHH-HHHHH
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-------------------------hhhHHHHH-HHHHH
Confidence            36799999999999999999999888999999987653210                         00001111 11234


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|+||+++++++...        +..++||||++ |+|.+++....                  ...+++..++.+
T Consensus        56 l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~-~~L~~~~~~~~------------------~~~~~~~~~~~~  108 (299)
T 2r3i_A           56 LKELNHPNIVKLLDVIHTE--------NKLYLVFEFLH-QDLKKFMDASA------------------LTGIPLPLIKSY  108 (299)
T ss_dssp             HTTCCCTTBCCEEEEEEET--------TEEEEEEECCS-EEHHHHHHHTT------------------TTCCCHHHHHHH
T ss_pred             HHHcCCCCeeeEEEEEecC--------CceEEEEEccc-CCHHHHHHhhh------------------ccCCCHHHHHHH
Confidence            5666899999999998753        46999999996 79999998753                  124788899999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.|++.||+|||++||+||||||+||+++.++.+||+|||+++....... ......+|+.|+|||++.+..        
T Consensus       109 ~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~--------  179 (299)
T 2r3i_A          109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGAK--------  179 (299)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB-CTTSCBCCCTTCCHHHHTTCS--------
T ss_pred             HHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc-ccCcccccccccCcHHhhccc--------
Confidence            99999999999999999999999999999999999999999987643322 234557899999999987532        


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhcc-ChHHHHHhhhc---cCcc-----
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQY-DLNKWREYTRL---RSDF-----  444 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~---~~~~-----  444 (502)
                                   .++.++|||||||++|||++|..|+......  ........+. ....|......   .+.+     
T Consensus       180 -------------~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (299)
T 2r3i_A          180 -------------YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR  246 (299)
T ss_dssp             -------------SCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCC
T ss_pred             -------------cCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccc
Confidence                         2446789999999999999998887654432  2222222221 11112211111   1111     


Q ss_pred             ----ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          445 ----TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       445 ----~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                          ...+..++++.+|+.+||+   .||++|||++++++||||++....
T Consensus       247 ~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~~~l~hp~~~~~~~~  293 (299)
T 2r3i_A          247 QDFSKVVPPLDEDGRSLLSQMLH---YDPNKRISAKAALAHPFFQDVTKP  293 (299)
T ss_dssp             CCHHHHSTTCCHHHHHHHHHHTC---SSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             hhhHhhCCCCCHHHHHHHHHhcC---cCcccCCCHHHHhcChhhhcCCCC
Confidence                1123478999999999999   777999999999999999976553


No 100
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-43  Score=365.83  Aligned_cols=260  Identities=22%  Similarity=0.231  Sum_probs=200.9

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||+||+|+...+|+.||+|++.....    .                       ....+. .+...+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~----~-----------------------~~~~~~-~E~~il  102 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP----L-----------------------DKYTVK-NEISIM  102 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH----H-----------------------HHHHHH-HHHHHH
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch----h-----------------------hHHHHH-HHHHHH
Confidence            579999999999999999999988999999988765211    0                       000111 122335


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++..        .+..++||||+++|+|.+++...+                   ..+++..++.++
T Consensus       103 ~~l~hpnIv~~~~~~~~--------~~~~~lv~E~~~gg~L~~~l~~~~-------------------~~l~~~~~~~i~  155 (387)
T 1kob_A          103 NQLHHPKLINLHDAFED--------KYEMVLILEFLSGGELFDRIAAED-------------------YKMSEAEVINYM  155 (387)
T ss_dssp             TTCCSTTBCCEEEEEEC--------SSEEEEEEECCCCCBHHHHTTCTT-------------------CCBCHHHHHHHH
T ss_pred             HhCCCcCCCeEEEEEEe--------CCEEEEEEEcCCCCcHHHHHHhhc-------------------CCCCHHHHHHHH
Confidence            66789999999999865        346999999999999999997543                   257899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEcc--CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTK--RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      .||+.||+|||+++|+||||||+|||++.  ++.+||+|||+++.......  .....||+.|+|||++.+..       
T Consensus       156 ~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-------  226 (387)
T 1kob_A          156 RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREP-------  226 (387)
T ss_dssp             HHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC--EEEECSSGGGCCHHHHTTCC-------
T ss_pred             HHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc--eeeeccCCCccCchhccCCC-------
Confidence            99999999999999999999999999974  47899999999997654332  23457899999999997533       


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                     ++.++|||||||++|||++|..|+........ ..+.....           ......+...+++
T Consensus       227 ---------------~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~-----------~~~~~~~~~~s~~  280 (387)
T 1kob_A          227 ---------------VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW-----------EFDEDAFSSVSPE  280 (387)
T ss_dssp             ---------------BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC-----------CCCSSTTTTSCHH
T ss_pred             ---------------CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----------CCCccccccCCHH
Confidence                           44567999999999999999998765432111 11111111           1112234567899


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      +.+||.+||+   .||++|||++|+++||||+....
T Consensus       281 ~~~li~~~L~---~dP~~Rpt~~ell~hp~~~~~~~  313 (387)
T 1kob_A          281 AKDFIKNLLQ---KEPRKRLTVHDALEHPWLKGDHS  313 (387)
T ss_dssp             HHHHHHTTSC---SSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             HHHHHHHHcC---CChhHCcCHHHHhhCccccCCcc
Confidence            9999999999   77799999999999999986543


No 101
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=3.8e-44  Score=368.42  Aligned_cols=286  Identities=16%  Similarity=0.132  Sum_probs=192.1

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH--HH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE--WF  212 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~--~~  212 (502)
                      ...+|.+.+.||+|+||+||+|++..+|+.||+|++.......                        ......+.+  ..
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~~E~~~  115 (371)
T 3q60_A           60 GERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS------------------------RSELERLHEATFA  115 (371)
T ss_dssp             CEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH------------------------HHHHHHHHHHHHH
T ss_pred             CceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc------------------------ccHHHHHHHHHHH
Confidence            4456999999999999999999998899999999888632200                        000011111  11


Q ss_pred             HHHhhhcCCccccccccccc-------cccCC---------ccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhcc
Q 039267          213 NYRLSRAAPETCAEFLGSFV-------ADKTN---------SQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFG  276 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~-------~~~~~---------~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~  276 (502)
                      ...+.. .||||++++..+.       .....         ........+|||||++ |+|.+++...+.          
T Consensus       116 ~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----------  183 (371)
T 3q60_A          116 AARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----------  183 (371)
T ss_dssp             HHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----------
T ss_pred             HHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----------
Confidence            223444 7999888664443       11110         0001134899999997 999999987521          


Q ss_pred             ccccCCCccccCHHHH------HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCc
Q 039267          277 RVLEGEDSTKRSALII------KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNR  350 (502)
Q Consensus       277 ~~~~~~~~~~l~~~~~------~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  350 (502)
                               .+.+..+      ..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+......    ..
T Consensus       184 ---------~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~  250 (371)
T 3q60_A          184 ---------VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PA  250 (371)
T ss_dssp             ---------SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EG
T ss_pred             ---------ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cC
Confidence                     1222333      6777999999999999999999999999999999999999999999764322    14


Q ss_pred             ccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccC
Q 039267          351 TLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYD  430 (502)
Q Consensus       351 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~  430 (502)
                      ..+|+.|+|||++.+..                    ..++.++|||||||++|||++|..|+.............    
T Consensus       251 ~~~t~~y~aPE~~~~~~--------------------~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~----  306 (371)
T 3q60_A          251 SSVPVTYAPREFLNAST--------------------ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKR----  306 (371)
T ss_dssp             GGSCGGGCCHHHHTCSE--------------------EECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCB----
T ss_pred             ccCCcCCcChhhccCCC--------------------CCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhh----
Confidence            56779999999996411                    234567899999999999999999986553322110000    


Q ss_pred             hHHHHHhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchhHHhhh
Q 039267          431 LNKWREYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAAAVLSR  497 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~~~~~~  497 (502)
                       ............++....+++++.+|+.+||+   .||++|||++++++||||+....+..+.++.
T Consensus       307 -~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~e~l~hp~f~~~~~~~~~~~s~  369 (371)
T 3q60_A          307 -PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLN---FDRRRRLLPLEAMETPEFLQLQNEISSSLST  369 (371)
T ss_dssp             -CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTC---SSTTTCCCHHHHTTSHHHHHHHHHHHHHHC-
T ss_pred             -hhhhhccccccchhhccCCCHHHHHHHHHHcC---CChhhCCCHHHHhcCHHHHHHHHHHhhhhhc
Confidence             00000011122233345679999999999999   7779999999999999999877776666553


No 102
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=2.9e-43  Score=349.46  Aligned_cols=272  Identities=19%  Similarity=0.214  Sum_probs=210.2

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|.+.+.||+|+||.||+|++..+++.||+|++.......                         ............
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-------------------------~~~~~~~~~e~~   67 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-------------------------PHQREKMSMEIS   67 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-------------------------HHHHHHHHHHHH
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC-------------------------HHHHHHHHHHHH
Confidence            4467999999999999999999998889999998877532110                         000011111223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.|+||+++++++..        .+..++||||+++++|.+++...+                    .+++..++.
T Consensus        68 ~l~~l~h~~iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~--------------------~~~~~~~~~  119 (294)
T 2rku_A           68 IHRSLAHQHVVGFHGFFED--------NDFVFVVLELCRRRSLLELHKRRK--------------------ALTEPEARY  119 (294)
T ss_dssp             HHHTCCCTTBCCEEEEEEC--------SSEEEEEEECCTTCBHHHHHHHHC--------------------SCCHHHHHH
T ss_pred             HHHhCCCCCEeeeeeeecc--------CCEEEEEEecCCCCCHHHHHHhcC--------------------CCCHHHHHH
Confidence            4566789999999999865        345999999999999999998653                    578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..       
T Consensus       120 i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-------  191 (294)
T 2rku_A          120 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYIAPEVLSKKG-------  191 (294)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-CBCCCCSCCSSCCHHHHTTSC-------
T ss_pred             HHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc-ccccccCCCCcCCcchhccCC-------
Confidence            999999999999999999999999999999999999999999987653322 234567899999999987533       


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                     ++.++||||||+++|||++|..|+..........            ...  ......+...+..+
T Consensus       192 ---------------~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~  242 (294)
T 2rku_A          192 ---------------HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------------RIK--KNEYSIPKHINPVA  242 (294)
T ss_dssp             ---------------BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------------HHH--TTCCCCCTTSCHHH
T ss_pred             ---------------CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------------HHh--hccCCCccccCHHH
Confidence                           3457799999999999999998875443211110            000  11223445678999


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchhHHhhhcc
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAAAVLSRLS  499 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~~~~~~l~  499 (502)
                      .+|+.+||+   .||++|||++++++||||......+......++
T Consensus       243 ~~li~~~l~---~~p~~Rps~~~ll~~~~~~~~~~~~~~~~~~~~  284 (294)
T 2rku_A          243 ASLIQKMLQ---TDPTARPTINELLNDEFFTSGYIPARLPITCLT  284 (294)
T ss_dssp             HHHHHHHTC---SSGGGSCCGGGGGGSHHHHTSCCCSCCCGGGGT
T ss_pred             HHHHHHHcc---cChhhCcCHHHHhhChheecCCcCCCCCccCCC
Confidence            999999999   777999999999999999987776655555544


No 103
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.7e-43  Score=376.36  Aligned_cols=263  Identities=22%  Similarity=0.267  Sum_probs=204.2

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      .-.++|++.+.||+|+||+||+|+...+|+.||||++.+...... ..                       ...+. .+.
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-~~-----------------------~~~~~-~E~   77 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK-TD-----------------------KESLL-REV   77 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBS-SC-----------------------HHHHH-HHH
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccc-hH-----------------------HHHHH-HHH
Confidence            445679999999999999999999998999999999876332100 00                       00111 112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+.+|+|.+++...+                    .+++..++
T Consensus        78 ~~l~~l~hpniv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~--------------------~~~~~~~~  129 (484)
T 3nyv_A           78 QLLKQLDHPNIMKLYEFFED--------KGYFYLVGEVYTGGELFDEIISRK--------------------RFSEVDAA  129 (484)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHTCS--------------------CCBHHHHH
T ss_pred             HHHHhCCCCCCCcEEEEEEe--------CCEEEEEEecCCCCCHHHHHHhcC--------------------CCCHHHHH
Confidence            23566679999999999865        346999999999999999998654                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVL---TKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+++.......  .....||+.|+|||++.+     
T Consensus       130 ~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-----  202 (484)
T 3nyv_A          130 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEVLHG-----  202 (484)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS--HHHHTTGGGTCCHHHHHT-----
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc--cccCCCCccccCceeecC-----
Confidence            999999999999999999999999999999   5678999999999987654332  234578999999999864     


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                        .++.++|||||||++|+|++|..|+........ ..+....+           ....+.+..
T Consensus       203 ------------------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------~~~~~~~~~  253 (484)
T 3nyv_A          203 ------------------TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY-----------TFELPQWKK  253 (484)
T ss_dssp             ------------------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----------CCCSGGGGG
T ss_pred             ------------------CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----------CCCCccccc
Confidence                              244678999999999999999998765433211 11111111           112234456


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      .++++++|+.+||+   .||.+|||++|+|+||||+...
T Consensus       254 ~s~~~~~li~~~L~---~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          254 VSESAKDLIRKMLT---YVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             SCHHHHHHHHHHTC---SSGGGSCCHHHHHTSHHHHHHT
T ss_pred             CCHHHHHHHHHHCC---CChhHCcCHHHHhhChhhcccc
Confidence            79999999999999   7779999999999999998543


No 104
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=8.6e-43  Score=349.34  Aligned_cols=280  Identities=18%  Similarity=0.209  Sum_probs=191.4

Q ss_pred             cCCEEEE-eeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          136 RTDFVIG-DKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       136 ~~~~~~~-~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      .+.|.+. +.||+|+||+||+|+...+++.||||++......                           ....+.++...
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~~E~~~   63 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---------------------------IRSRVFREVEM   63 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC---------------------------CHHHHHHHHHH
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch---------------------------hHHHHHHHHHH
Confidence            3568885 7899999999999999889999999988653110                           00111222222


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      ......||||+++++++...        +..++||||+++|+|.+++...+                    .+++..++.
T Consensus        64 l~~~~~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~  115 (316)
T 2ac3_A           64 LYQCQGHRNVLELIEFFEEE--------DRFYLVFEKMRGGSILSHIHKRR--------------------HFNELEASV  115 (316)
T ss_dssp             HHHTCCCTTBCCEEEEEEET--------TEEEEEEECCTTCBHHHHHHHHS--------------------SCCHHHHHH
T ss_pred             HHHhcCCCCeeeEEEEEeeC--------CEEEEEEEcCCCCcHHHHHhccC--------------------CCCHHHHHH
Confidence            22234799999999998753        46999999999999999998754                    578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeccccccccCCCc------cCCCcccCCCCcCCcccccC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ---IKLIDFGAATDLRIGKN------YVPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~---~kL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~  365 (502)
                      ++.||+.||+|||+++|+||||||+|||++.++.   +||+|||+++.......      .......||+.|+|||++..
T Consensus       116 i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  195 (316)
T 2ac3_A          116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA  195 (316)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhc
Confidence            9999999999999999999999999999998776   99999999986543221      11224468999999999864


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh---HHHHHhhccChHHHHHhhhccC
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF---NMEIKTAQYDLNKWREYTRLRS  442 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  442 (502)
                      ....                 ...++.++|||||||++|||++|..|+.......   ......................
T Consensus       196 ~~~~-----------------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  258 (316)
T 2ac3_A          196 FSEE-----------------ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY  258 (316)
T ss_dssp             TSHH-----------------HHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC
T ss_pred             cccc-----------------ccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCc
Confidence            1100                 0224567899999999999999998876542110   0000000000000001111111


Q ss_pred             cc--ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          443 DF--TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       443 ~~--~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      .+  ..+...+.++.+|+.+||+   .||++|||++|+++||||+.....
T Consensus       259 ~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rps~~e~l~hp~~~~~~~~  305 (316)
T 2ac3_A          259 EFPDKDWAHISCAAKDLISKLLV---RDAKQRLSAAQVLQHPWVQGCAPE  305 (316)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHSC---SSTTTSCCHHHHHHSTTCC-----
T ss_pred             ccCchhcccCCHHHHHHHHHHhh---CChhhCCCHHHHhcChhhcCCCCc
Confidence            11  1123468899999999999   777999999999999999965443


No 105
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=9.3e-43  Score=384.93  Aligned_cols=263  Identities=18%  Similarity=0.182  Sum_probs=203.4

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|++.+.||+|+||.||+|++..+++.||||++++....          .              .........+.
T Consensus       337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~----------~--------------~~~~~~~~~E~  392 (674)
T 3pfq_A          337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI----------Q--------------DDDVECTMVEK  392 (674)
T ss_dssp             ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH----------H--------------TTTTHHHHHHH
T ss_pred             cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc----------c--------------HHHHHHHHHHH
Confidence            45678999999999999999999999999999999998752110          0              00011111111


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      .......+|++|+.+++++..        .+..+|||||+++|+|.+++...+                    .+++..+
T Consensus       393 ~~l~~~~~~~~i~~l~~~~~~--------~~~~~lV~E~~~gg~L~~~l~~~~--------------------~~~~~~~  444 (674)
T 3pfq_A          393 RVLALPGKPPFLTQLHSCFQT--------MDRLYFVMEYVNGGDLMYHIQQVG--------------------RFKEPHA  444 (674)
T ss_dssp             HHHTCTTCCTTBCCEEEECBC--------SSEEEEEEECCCSCBHHHHHHHHS--------------------SCCHHHH
T ss_pred             HHHHhccCCCeEEEEEEEEEe--------CCEEEEEEeCcCCCcHHHHHHhcC--------------------CCCHHHH
Confidence            122223379999999998865        346999999999999999998764                    5889999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||+++|+||||||+||||+.++.+||+|||+|+...... ......+||+.|||||++.+..     
T Consensus       445 ~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~-----  518 (674)
T 3pfq_A          445 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-VTTKTFCGTPDYIAPEIIAYQP-----  518 (674)
T ss_dssp             HHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-CCBCCCCSCSSSCCHHHHTCCC-----
T ss_pred             HHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC-cccccccCCCcccCHhhhcCCC-----
Confidence            9999999999999999999999999999999999999999999998643332 2345678999999999997543     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                       |+.++|||||||+||||++|..|+.........  .          .+.  ......+...+.
T Consensus       519 -----------------~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~--~----------~i~--~~~~~~p~~~s~  567 (674)
T 3pfq_A          519 -----------------YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF--Q----------SIM--EHNVAYPKSMSK  567 (674)
T ss_dssp             -----------------BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--H----------HHH--SSCCCCCTTSCH
T ss_pred             -----------------CCccceEechHHHHHHHHcCCCCCCCCCHHHHH--H----------HHH--hCCCCCCccCCH
Confidence                             456789999999999999999998654322111  1          011  122334456899


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCH-----HHHhcCCccccC
Q 039267          453 RGWDLATKLISERGFLRRGRLSA-----AAALRHPYFLLG  487 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~-----~evl~HP~f~~~  487 (502)
                      ++.+||.+||+   .||.+||++     +||++||||+..
T Consensus       568 ~~~~li~~lL~---~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          568 EAVAICKGLMT---KHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             HHHHHHHHHSC---SSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             HHHHHHHHHcc---CCHHHCCCCCCCcHHHHhcCccccCC
Confidence            99999999999   666999997     999999999853


No 106
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.5e-43  Score=346.85  Aligned_cols=262  Identities=23%  Similarity=0.306  Sum_probs=181.8

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|+...+|+.||+|++......           +             ......+. .....
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------~-------------~~~~~~~~-~e~~~   64 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-----------K-------------AGMVQRVQ-NEVKI   64 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-----------H-------------TTCHHHHH-HHHHH
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh-----------h-------------hhHHHHHH-HHHHH
Confidence            35799999999999999999999889999999988652110           0             00001111 12234


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..        .+..++||||+++++|.+++....                   ..+++..++.+
T Consensus        65 l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~~~~~~  117 (278)
T 3cok_A           65 HCQLKHPSILELYNYFED--------SNYVYLVLEMCHNGEMNRYLKNRV-------------------KPFSENEARHF  117 (278)
T ss_dssp             HTTBCCTTBCCEEEEEEC--------SSEEEEEEECCTTEEHHHHHHTCS-------------------SCCCHHHHHHH
T ss_pred             HHhCCCCCeEeEEEEEcc--------CCeEEEEEecCCCCcHHHHHhhcc-------------------CCCCHHHHHHH
Confidence            566789999999999865        345999999999999999998652                   25789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.|++.||+|||+++|+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+...+      
T Consensus       118 ~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~------  190 (278)
T 3cok_A          118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE-KHYTLCGTPNYISPEIATRSAHG------  190 (278)
T ss_dssp             HHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------------
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC-cceeccCCCCcCCcchhcCCCCC------
Confidence            99999999999999999999999999999999999999999987653322 22345789999999998764433      


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                      .++||||||+++|||++|..|+........  ...          .  .......+...+.++.
T Consensus       191 ----------------~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~----------~--~~~~~~~~~~~~~~~~  240 (278)
T 3cok_A          191 ----------------LESDVWSLGCMFYTLLIGRPPFDTDTVKNT--LNK----------V--VLADYEMPSFLSIEAK  240 (278)
T ss_dssp             -----------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------------C--CSSCCCCCTTSCHHHH
T ss_pred             ----------------chhhHHHHHHHHHHHHhCCCCCCChhHHHH--HHH----------H--hhcccCCccccCHHHH
Confidence                            456999999999999999888754322111  000          0  0112233455789999


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      +|+.+||+   .||++|||++++++||||.....
T Consensus       241 ~li~~~l~---~dp~~Rps~~~~l~h~~~~~~~~  271 (278)
T 3cok_A          241 DLIHQLLR---RNPADRLSLSSVLDHPFMSRNSS  271 (278)
T ss_dssp             HHHHHHSC---SSGGGSCCHHHHTTSTTTC----
T ss_pred             HHHHHHcc---cCHhhCCCHHHHhcCccccCCCC
Confidence            99999999   77799999999999999986543


No 107
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=2.6e-43  Score=359.76  Aligned_cols=263  Identities=20%  Similarity=0.265  Sum_probs=199.9

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .+.|.+.+.||+|+||+||+|+...+|+.||||++.......                        ......+.+ +...
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~------------------------~~~~~~~~~-E~~~  107 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS------------------------NEKWQDIIK-EVRF  107 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCH------------------------HHHHHHHHH-HHHH
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccc------------------------hHHHHHHHH-HHHH
Confidence            356999999999999999999998899999999887532110                        000111111 1223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++...        +..+|||||+. |+|.+++...+                   ..+++..+..+
T Consensus       108 l~~l~hpniv~~~~~~~~~--------~~~~lv~e~~~-g~l~~~l~~~~-------------------~~l~~~~~~~i  159 (348)
T 1u5q_A          108 LQKLRHPNTIQYRGCYLRE--------HTAWLVMEYCL-GSASDLLEVHK-------------------KPLQEVEIAAV  159 (348)
T ss_dssp             HHHCCCTTBCCEEEEEEET--------TEEEEEEECCS-EEHHHHHHHHT-------------------SCCCHHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEEEC--------CeEEEEEecCC-CCHHHHHHHhc-------------------CCCCHHHHHHH
Confidence            5666799999999998763        36999999995 79999887543                   25789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.....     ....||+.|+|||++....        
T Consensus       160 ~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-----~~~~gt~~y~aPE~~~~~~--------  226 (348)
T 1u5q_A          160 THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMD--------  226 (348)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHHTTS--------
T ss_pred             HHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-----CcccCCcceeCHhhhcccc--------
Confidence            999999999999999999999999999999999999999999875432     3457899999999986321        


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                 ...++.++|||||||++|||++|..|+......... ....           ............++.+.
T Consensus       227 -----------~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~l~  283 (348)
T 1u5q_A          227 -----------EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIA-----------QNESPALQSGHWSEYFR  283 (348)
T ss_dssp             -----------SCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHH-----------HSCCCCCCCTTSCHHHH
T ss_pred             -----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHH-----------hcCCCCCCCCCCCHHHH
Confidence                       123556789999999999999999887554322111 1100           00011112345688999


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      +|+.+||+   .||++|||++++++||||......
T Consensus       284 ~li~~~l~---~dP~~Rps~~~ll~h~~~~~~~~~  315 (348)
T 1u5q_A          284 NFVDSCLQ---KIPQDRPTSEVLLKHRFVLRERPP  315 (348)
T ss_dssp             HHHHHHTC---SSGGGSCCHHHHTTCHHHHSCCCT
T ss_pred             HHHHHHcc---cChhhCcCHHHHhhChhhhccCCc
Confidence            99999999   777999999999999999876554


No 108
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2.1e-44  Score=371.38  Aligned_cols=288  Identities=15%  Similarity=0.091  Sum_probs=198.2

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||+||+|++..+|+.||||++........ ...+.+..|..++                     
T Consensus        70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~E~~~l---------------------  127 (377)
T 3byv_A           70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPS-NAIKQMKEEVLRL---------------------  127 (377)
T ss_dssp             CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCT-THHHHHHHHHHGG---------------------
T ss_pred             CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccch-HHHHHHHHHHHHH---------------------
Confidence            446789999999999999999999988999999999875322110 0001111122111                     


Q ss_pred             HHhhhcCCccccccccccccccCCcc-----------ccCC-----ceEEEEeecCCCcHHHHHHhcCCCCcchhhhccc
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQ-----------FTKG-----GKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGR  277 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~-----------~~~~-----~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~  277 (502)
                      ..+..+.||||+++++.+........           ..++     ..+|||||+ +|+|.+++...+..          
T Consensus       128 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~----------  196 (377)
T 3byv_A          128 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSH----------  196 (377)
T ss_dssp             GGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHT----------
T ss_pred             HhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcccc----------
Confidence            23556679999999965543110000           0011     278999999 78999999875310          


Q ss_pred             cccCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCc
Q 039267          278 VLEGEDSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDY  357 (502)
Q Consensus       278 ~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y  357 (502)
                         ......+++..+..|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....    ......| +.|
T Consensus       197 ---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y  268 (377)
T 3byv_A          197 ---SSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGF  268 (377)
T ss_dssp             ---TTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTC
T ss_pred             ---ccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCc
Confidence               01123456788999999999999999999999999999999999999999999999986432    2234467 999


Q ss_pred             CCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHh
Q 039267          358 CPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREY  437 (502)
Q Consensus       358 ~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  437 (502)
                      +|||++.+.....           ....-...++.++|||||||++|||++|..|+........                
T Consensus       269 ~aPE~~~~~~~~~-----------~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~----------------  321 (377)
T 3byv_A          269 EPPELEARRATIS-----------YHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG----------------  321 (377)
T ss_dssp             CCHHHHHHHTSTH-----------HHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC----------------
T ss_pred             cChhhhccccccc-----------ccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc----------------
Confidence            9999997530000           0000011456788999999999999999988643221100                


Q ss_pred             hhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchhHH
Q 039267          438 TRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAAAV  494 (502)
Q Consensus       438 ~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~~~  494 (502)
                        ..........+++++.+|+.+||+   .||++|||++++++||||+...+...+.
T Consensus       322 --~~~~~~~~~~~~~~~~~li~~~L~---~dp~~Rpt~~e~l~hp~f~~~~~~~~~~  373 (377)
T 3byv_A          322 --SEWIFRSCKNIPQPVRALLEGFLR---YPKEDRLLPLQAMETPEYEQLRTELSAA  373 (377)
T ss_dssp             --SGGGGSSCCCCCHHHHHHHHHHTC---SSGGGCCCHHHHHTSHHHHHHHHHHHHH
T ss_pred             --hhhhhhhccCCCHHHHHHHHHHcC---CCchhCCCHHHHhhChHHHHHHHHHHHh
Confidence              000111234578999999999999   7779999999999999999766554443


No 109
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=2.9e-43  Score=345.42  Aligned_cols=264  Identities=20%  Similarity=0.245  Sum_probs=202.7

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||.||+|+...+++.||+|++.......                          ....+. .....+
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~-~e~~~l   59 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--------------------------CPENIK-KEICIN   59 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTT--------------------------HHHHHH-HHHHHH
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchh--------------------------hhHHHH-HHHHHH
Confidence            46999999999999999999998889999999886532100                          000111 112235


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.|+||+++++++...        +..++||||+++++|.+++....                    .+++..++.++
T Consensus        60 ~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~~~  111 (276)
T 2yex_A           60 KMLNHENVVKFYGHRREG--------NIQYLFLEYCSGGELFDRIEPDI--------------------GMPEPDAQRFF  111 (276)
T ss_dssp             HTCCCTTBCCEEEEEEET--------TEEEEEEECCTTEEGGGGSBTTT--------------------BCCHHHHHHHH
T ss_pred             HhcCCCCceeeeeEEEcC--------CEEEEEEEecCCCcHHHHHhhcc--------------------CCCHHHHHHHH
Confidence            566899999999988653        35899999999999999987542                    57899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc-cCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN-YVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      .|++.||+|||+++|+||||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+...       
T Consensus       112 ~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-------  184 (276)
T 2yex_A          112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF-------  184 (276)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSB-------
T ss_pred             HHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCC-------
Confidence            9999999999999999999999999999999999999999987643322 23345678999999999875332       


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                    ++.++||||||+++|||++|..|+...........        .|.   ........+...++++.
T Consensus       185 --------------~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--------~~~---~~~~~~~~~~~~~~~~~  239 (276)
T 2yex_A          185 --------------HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--------DWK---EKKTYLNPWKKIDSAPL  239 (276)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH--------HHH---TTCTTSTTGGGSCHHHH
T ss_pred             --------------CCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH--------Hhh---hcccccCchhhcCHHHH
Confidence                          23467999999999999999998765443222111        111   11111223345789999


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      +|+.+||+   .||++|||++++++||||+....+
T Consensus       240 ~li~~~l~---~~p~~Rps~~~il~~~~~~~~~~~  271 (276)
T 2yex_A          240 ALLHKILV---ENPSARITIPDIKKDRWYNKPLKK  271 (276)
T ss_dssp             HHHHHHSC---SSTTTSCCHHHHTTCTTTTCCCC-
T ss_pred             HHHHHHCC---CCchhCCCHHHHhcCccccChhhc
Confidence            99999999   777999999999999999966544


No 110
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.2e-43  Score=358.17  Aligned_cols=278  Identities=23%  Similarity=0.276  Sum_probs=198.4

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++..+|+.||+|++........         +...             ..... .+...
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---------~~~~-------------~~~~~-~E~~~   65 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA---------KDGI-------------NRTAL-REIKL   65 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC----------------------------------CTHHH-HHHHH
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchh---------hhhh-------------hHHHH-HHHHH
Confidence            4679999999999999999999988999999998875322100         0000             00111 11223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|+||+++++++..        .+..++||||++ ++|.+++....                   ..+++..++.+
T Consensus        66 l~~l~h~~iv~~~~~~~~--------~~~~~lv~e~~~-~~l~~~~~~~~-------------------~~~~~~~~~~~  117 (346)
T 1ua2_A           66 LQELSHPNIIGLLDAFGH--------KSNISLVFDFME-TDLEVIIKDNS-------------------LVLTPSHIKAY  117 (346)
T ss_dssp             HHHCCCTTBCCEEEEECC--------TTCCEEEEECCS-EEHHHHHTTCC-------------------SSCCSSHHHHH
T ss_pred             HhhCCCCCCCeEEEEEee--------CCceEEEEEcCC-CCHHHHHHhcC-------------------cCCCHHHHHHH
Confidence            566689999999999865        346999999996 59999987653                   24677889999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..        
T Consensus       118 ~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~--------  188 (346)
T 1ua2_A          118 MLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYTHQVVTRWYRAPELLFGAR--------  188 (346)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCS--------
T ss_pred             HHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc-cCCcccccccccCchHhhCCC--------
Confidence            99999999999999999999999999999999999999999987654322 334567899999999986532        


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhcc-ChHHHHHhhhccCc---------
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQY-DLNKWREYTRLRSD---------  443 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~---------  443 (502)
                                   .++.++|||||||++|||++|..|+.....  .+.......+. ....|.........         
T Consensus       189 -------------~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (346)
T 1ua2_A          189 -------------MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI  255 (346)
T ss_dssp             -------------CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCC
T ss_pred             -------------CCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCC
Confidence                         244678999999999999998776544332  22222322222 12222222111100         


Q ss_pred             --cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          444 --FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       444 --~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                        .......++++.+|+.+||+   .||++|||++|+++||||+....
T Consensus       256 ~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          256 PLHHIFSAAGDDLLDLIQGLFL---FNPCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHHC---SSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             ChHHhhccCCHHHHHHHHHHhc---cChhhCCCHHHHhcChhhhcCCC
Confidence              01234568999999999999   77799999999999999986543


No 111
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=2.8e-43  Score=359.31  Aligned_cols=285  Identities=21%  Similarity=0.262  Sum_probs=193.7

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||+||+|++..+|+.||||++.......                             ..+....
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~~~~~   70 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-----------------------------NRELQIM   70 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC-----------------------------CHHHHHH
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc-----------------------------HHHHHHH
Confidence            45678999999999999999999998899999999875422100                             0011112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||++++++|....... ......++||||++ ++|.+.+....                .....+++..++
T Consensus        71 ~~l~~l~h~niv~~~~~~~~~~~~~-~~~~~~~lv~e~~~-~~l~~~~~~~~----------------~~~~~~~~~~~~  132 (360)
T 3e3p_A           71 QDLAVLHHPNIVQLQSYFYTLGERD-RRDIYLNVVMEYVP-DTLHRCCRNYY----------------RRQVAPPPILIK  132 (360)
T ss_dssp             HHHHHHCCTTBCCEEEEEEEECSSC-TTCEEEEEEEECCS-CBHHHHHHHHH----------------TTTCCCCHHHHH
T ss_pred             HHHHhcCCCCcccHHHhhhcccccc-ccceeEEEEeeccc-ccHHHHHHHHh----------------hcccCCCHHHHH
Confidence            2355568999999999987643211 11223789999996 56666554321                012357889999


Q ss_pred             HHHHHHHHHHHHHH--HcCCeeccCCCCcEEEcc-CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          294 QILRQIITSLKKIH--DTGIVHRDVKPANLVLTK-RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       294 ~i~~qia~gL~yLH--~~~IiHrDlKp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.|++.||.|||  +++|+||||||+|||++. ++.+||+|||+++.......  .....||+.|+|||++.+..   
T Consensus       133 ~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---  207 (360)
T 3e3p_A          133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQ---  207 (360)
T ss_dssp             HHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCS---
T ss_pred             HHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCC---
Confidence            99999999999999  999999999999999997 89999999999987654432  23557899999999986532   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhccChH-HHHHhhhccCcc---
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQYDLN-KWREYTRLRSDF---  444 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~---  444 (502)
                                        .++.++|||||||++|||++|..|+......  ........+.... .|..........   
T Consensus       208 ------------------~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (360)
T 3e3p_A          208 ------------------HYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLY  269 (360)
T ss_dssp             ------------------SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGG
T ss_pred             ------------------CCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcccc
Confidence                              2456789999999999999999887654432  2222222222222 222221110000   


Q ss_pred             ------------ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          445 ------------TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       445 ------------~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                                  ......++++.+|+.+||+   .||.+|||++|+|+||||+...+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~e~l~hp~f~~~~~~~  325 (360)
T 3e3p_A          270 NSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ---YLPEERMKPYEALCHPYFDELHDPA  325 (360)
T ss_dssp             CCCCCCHHHHTTTCCCTTHHHHHHHHHHHTC---SSGGGSCCHHHHTTSGGGGGGGCTT
T ss_pred             ccccCCcccccchhhccccHHHHHHHHHHhc---cCccccCCHHHHhcCccccccCCcc
Confidence                        0112257889999999999   7779999999999999999766544


No 112
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=356.40  Aligned_cols=281  Identities=14%  Similarity=0.131  Sum_probs=200.7

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||+||+|++..+|+.||||++......          .                ..... ..+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------~----------------~~~~~-~~E~   58 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----------R----------------PVDVQ-MREF   58 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----------S----------------CHHHH-HHHH
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc----------c----------------hHHHH-HHHH
Confidence            4557899999999999999999999888999999988652210          0                00001 1112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++....      ....++||||+++|+|.+++....                 ....+++..++
T Consensus        59 ~~l~~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~-----------------~~~~~~~~~~~  115 (319)
T 4euu_A           59 EVLKKLNHKNIVKLFAIEEETT------TRHKVLIMEFCPCGSLYTVLEEPS-----------------NAYGLPESEFL  115 (319)
T ss_dssp             HHHHHCCCTTBCCEEEEEECTT------TCCEEEEEECCTTCBHHHHHHSGG-----------------GTTCCCHHHHH
T ss_pred             HHHHhcCCCCcceEEEEeecCC------CceEEEEEeCCCCCCHHHHHHHhc-----------------cccCCCHHHHH
Confidence            3356667999999999886543      235899999999999999998653                 11238899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEE----ccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVL----TKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl----~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      .++.||+.||+|||+++|+||||||+|||+    +.++.+||+|||+++.......  .....||+.|+|||++......
T Consensus       116 ~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~  193 (319)
T 4euu_A          116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYERAVLR  193 (319)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc--eeecccCCCccCHHHhhhcccc
Confidence            999999999999999999999999999999    7888999999999997655432  2345799999999998632211


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--h-hhHHHHHhh-ccChHHHHHhh-------
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--K-NFNMEIKTA-QYDLNKWREYT-------  438 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~-~~~~~~~~~-~~~~~~~~~~~-------  438 (502)
                      ...              ...++.++|||||||++|||++|..|+....  . ......... +.....|....       
T Consensus       194 ~~~--------------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  259 (319)
T 4euu_A          194 KDH--------------QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPI  259 (319)
T ss_dssp             CCC--------------CCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCE
T ss_pred             ccc--------------cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCcc
Confidence            110              2345678899999999999999988874221  1 111111111 11111110000       


Q ss_pred             ----hccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCc
Q 039267          439 ----RLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPY  483 (502)
Q Consensus       439 ----~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~  483 (502)
                          ............+..+.+|+.+||+   .||++|||++|+++||-
T Consensus       260 ~~~~~~~~~~~~~~~~~~~l~~ll~~~L~---~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          260 DWSGDMPVSCSLSRGLQVLLTPVLANILE---ADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             EEESSCCTTCSSCHHHHHHHHHHHHHHSC---CCTTTSCCHHHHHHHHH
T ss_pred             ccCccCCcccccchhHHHHhHHHHHHhcc---CChhhhccHHHhhhccH
Confidence                0011112233456788899999999   77799999999999973


No 113
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=3.3e-43  Score=356.46  Aligned_cols=272  Identities=19%  Similarity=0.216  Sum_probs=209.6

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|.+.+.||+|+||.||+|++..+++.||+|++.......                         .........+..
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-------------------------~~~~~~~~~E~~   93 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-------------------------PHQREKMSMEIS   93 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-------------------------HHHHHHHHHHHH
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC-------------------------HHHHHHHHHHHH
Confidence            4567999999999999999999998889999998887532100                         000111111223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.|+||+++++++...        +..++||||+++++|.+++...+                    .+++..++.
T Consensus        94 ~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~--------------------~l~~~~~~~  145 (335)
T 2owb_A           94 IHRSLAHQHVVGFHGFFEDN--------DFVFVVLELCRRRSLLELHKRRK--------------------ALTEPEARY  145 (335)
T ss_dssp             HHHTCCCTTBCCEEEEEECS--------SEEEEEECCCTTCBHHHHHHHHC--------------------SCCHHHHHH
T ss_pred             HHHhCCCCCCCeEEEEEecC--------CeEEEEEecCCCCCHHHHHhccC--------------------CCCHHHHHH
Confidence            45667899999999998753        46999999999999999998653                    578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..       
T Consensus       146 i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-------  217 (335)
T 2owb_A          146 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYIAPEVLSKKG-------  217 (335)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-CBCCCCSCCSSCCHHHHHTSC-------
T ss_pred             HHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-cccccCCCccccCHHHhccCC-------
Confidence            999999999999999999999999999999999999999999987653322 234567899999999987543       


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                     ++.++||||||+++|||++|..|+..........            ...  ..........+.++
T Consensus       218 ---------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~  268 (335)
T 2owb_A          218 ---------------HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------------RIK--KNEYSIPKHINPVA  268 (335)
T ss_dssp             ---------------BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------------HHH--HTCCCCCTTSCHHH
T ss_pred             ---------------CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH------------HHh--cCCCCCCccCCHHH
Confidence                           3457799999999999999998875443211110            000  01122344578899


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchhHHhhhcc
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAAAVLSRLS  499 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~~~~~~l~  499 (502)
                      .+|+.+||+   .||++|||++|+++||||......+......+.
T Consensus       269 ~~li~~~l~---~dp~~Rps~~ell~~~~~~~~~~~~~~~~~~~~  310 (335)
T 2owb_A          269 ASLIQKMLQ---TDPTARPTINELLNDEFFTSGYIPARLPITCLT  310 (335)
T ss_dssp             HHHHHHHTC---SSGGGSCCGGGGGGSHHHHTSCCCSCCCGGGGT
T ss_pred             HHHHHHHcc---CChhHCcCHHHHhcCccccCCCccccCCccccc
Confidence            999999999   777999999999999999987665544444433


No 114
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=1.2e-43  Score=382.90  Aligned_cols=265  Identities=19%  Similarity=0.172  Sum_probs=205.8

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+.+.||+|+||.||+|++..+|+.||+|++.+....       ..                 ...... ..+
T Consensus       180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-------~~-----------------~~~~~~-~~E  234 (576)
T 2acx_A          180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-------KR-----------------KGEAMA-LNE  234 (576)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-------HT-----------------TCHHHH-HHH
T ss_pred             CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-------hh-----------------HHHHHH-HHH
Confidence            46778999999999999999999999999999999988752110       00                 000001 111


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++..        ++..+|||||+++|+|.+++...+                  ...+++..+
T Consensus       235 ~~iL~~l~hp~Iv~l~~~~~~--------~~~l~lVmEy~~gg~L~~~l~~~~------------------~~~l~e~~~  288 (576)
T 2acx_A          235 KQILEKVNSRFVVSLAYAYET--------KDALCLVLTLMNGGDLKFHIYHMG------------------QAGFPEARA  288 (576)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHSSS------------------SCCCCHHHH
T ss_pred             HHHHHHcCCCCEeeEEEEEee--------CCEEEEEEEcCCCCcHHHHHHhcC------------------CCCCCHHHH
Confidence            123556689999999998865        346999999999999999998653                  124789999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....+..  ....+||+.|+|||++.+..     
T Consensus       289 ~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~--~~~~~GT~~Y~APEvl~~~~-----  361 (576)
T 2acx_A          289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNER-----  361 (576)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC--EECCCSCGGGCCHHHHTTCE-----
T ss_pred             HHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcc--ccccCCCccccCHHHHcCCC-----
Confidence            99999999999999999999999999999999999999999999987654432  23457999999999997633     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                       ++.++|||||||++|||++|..|+.......  .....          ....  .....+...
T Consensus       362 -----------------~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~----------~i~~--~~~~~p~~~  412 (576)
T 2acx_A          362 -----------------YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER----------LVKE--VPEEYSERF  412 (576)
T ss_dssp             -----------------ESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH----------HHHH--CCCCCCTTS
T ss_pred             -----------------CCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH----------Hhhc--ccccCCccC
Confidence                             4467799999999999999999886543211  11110          0111  112234567


Q ss_pred             chHHHHHHHHhhhccCCCCCCCc-----CHHHHhcCCccccC
Q 039267          451 SGRGWDLATKLISERGFLRRGRL-----SAAAALRHPYFLLG  487 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rp-----s~~evl~HP~f~~~  487 (502)
                      +.++++||.+||+   .||.+||     +++|+++||||+..
T Consensus       413 s~~~~dLI~~lL~---~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          413 SPQARSLCSQLLC---KDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             CHHHHHHHHHHTC---SSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHhcc---CCHHHcCCCCCCCHHHHHhChhhccC
Confidence            9999999999999   7779999     89999999999853


No 115
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.9e-43  Score=364.14  Aligned_cols=258  Identities=19%  Similarity=0.223  Sum_probs=193.0

Q ss_pred             EEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHhhh
Q 039267          139 FVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRLSR  218 (502)
Q Consensus       139 ~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l~~  218 (502)
                      +...+.||+|+||.||+|+...+|+.||+|+++....    ..                       ...+. .+...+..
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~----~~-----------------------~~~~~-~E~~~l~~  142 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM----KD-----------------------KEEVK-NEISVMNQ  142 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH----HH-----------------------HHHHH-HHHHHHTT
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc----cc-----------------------HHHHH-HHHHHHHh
Confidence            3446789999999999999988999999998875211    00                       00111 11234566


Q ss_pred             cCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHH
Q 039267          219 AAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQ  298 (502)
Q Consensus       219 ~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  298 (502)
                      +.||||+++++++..        .+..+|||||+++|+|.+++...+                   ..+++..++.++.|
T Consensus       143 l~hpnIv~~~~~~~~--------~~~~~lv~E~~~~~~L~~~l~~~~-------------------~~l~~~~~~~i~~q  195 (373)
T 2x4f_A          143 LDHANLIQLYDAFES--------KNDIVLVMEYVDGGELFDRIIDES-------------------YNLTELDTILFMKQ  195 (373)
T ss_dssp             CCCTTBCCEEEEEEC--------SSEEEEEEECCTTCEEHHHHHHTG-------------------GGCCHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEEEE--------CCEEEEEEeCCCCCcHHHHHHhcC-------------------CCCCHHHHHHHHHH
Confidence            689999999999875        346999999999999999997643                   25789999999999


Q ss_pred             HHHHHHHHHHcCCeeccCCCCcEEE--ccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          299 IITSLKKIHDTGIVHRDVKPANLVL--TKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       299 ia~gL~yLH~~~IiHrDlKp~NILl--~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      |+.||+|||+.+|+||||||+|||+  +.++.+||+|||+++.......  .....||+.|+|||++.+..         
T Consensus       196 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---------  264 (373)
T 2x4f_A          196 ICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVVNYDF---------  264 (373)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCCCCSSCTTCCHHHHTTCB---------
T ss_pred             HHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cccccCCCcEeChhhccCCC---------
Confidence            9999999999999999999999999  5678999999999997654432  23457999999999986533         


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                   ++.++|||||||++|||++|..|+........ ..+.....           ......+...++++.
T Consensus       265 -------------~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----------~~~~~~~~~~~~~~~  320 (373)
T 2x4f_A          265 -------------VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW-----------DLEDEEFQDISEEAK  320 (373)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-----------CSCSGGGTTSCHHHH
T ss_pred             -------------CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-----------CCChhhhccCCHHHH
Confidence                         34567999999999999999988765432211 11111111           111123345789999


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      +|+.+||+   .||.+|||++|+++||||++...
T Consensus       321 ~li~~~L~---~dp~~Rps~~e~l~hp~~~~~~~  351 (373)
T 2x4f_A          321 EFISKLLI---KEKSWRISASEALKHPWLSDHKL  351 (373)
T ss_dssp             HHHHTTSC---SSGGGSCCHHHHHHSHHHHCHHH
T ss_pred             HHHHHHcC---CChhhCCCHHHHhcCcCcCCCch
Confidence            99999999   77799999999999999986543


No 116
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=3.9e-43  Score=344.76  Aligned_cols=263  Identities=20%  Similarity=0.261  Sum_probs=195.0

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+.+.||+|+||.||+|++..+|+.||+|++......           .             ......+. ..
T Consensus         7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------~-------------~~~~~~~~-~e   61 (276)
T 2h6d_A            7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR-----------S-------------LDVVGKIK-RE   61 (276)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-----------H-------------TTCHHHHH-HH
T ss_pred             cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccccc-----------c-------------hhHHHHHH-HH
Confidence            35667899999999999999999999888999999988652110           0             00001111 11


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.|+||+++++++..        .+..++||||+++++|.+++...+                    .+++..+
T Consensus        62 ~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~  113 (276)
T 2h6d_A           62 IQNLKLFRHPHIIKLYQVIST--------PTDFFMVMEYVSGGELFDYICKHG--------------------RVEEMEA  113 (276)
T ss_dssp             HHHHHTCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHC--------------------SCCHHHH
T ss_pred             HHHHhcCCCCCEeEEEEEEec--------CCeEEEEEeccCCCcHHHHHhccC--------------------CCCHHHH
Confidence            233566789999999998865        346999999999999999998754                    5788999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  ......+|+.|+|||++.+...    
T Consensus       114 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~----  187 (276)
T 2h6d_A          114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAAPEVISGRLY----  187 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---------------CCTGGGTTSCC----
T ss_pred             HHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc--ceecccCCccccCHHHHcCCCC----
Confidence            9999999999999999999999999999999999999999999998765433  2234578999999999875332    


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                       .+.++||||||++++||++|..|+.........  .          ....  .....+...+.
T Consensus       188 -----------------~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~--~----------~~~~--~~~~~~~~~~~  236 (276)
T 2h6d_A          188 -----------------AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF--K----------KIRG--GVFYIPEYLNR  236 (276)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--H----------HHHH--CCCCCCTTSCH
T ss_pred             -----------------CCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH--H----------Hhhc--CcccCchhcCH
Confidence                             124679999999999999999887543321111  1          0000  11223345688


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      ++.+|+.+||+   .||++|||++++++||||++.-
T Consensus       237 ~l~~li~~~l~---~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          237 SVATLLMHMLQ---VDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             HHHHHHHHHTC---SSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HHHHHHHHHcc---CChhhCCCHHHHHhChhhccCc
Confidence            99999999999   7779999999999999998653


No 117
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=3.3e-43  Score=364.46  Aligned_cols=274  Identities=19%  Similarity=0.264  Sum_probs=194.9

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +...+|.+.+.||+|+||+||+|... +++.||||++......                         ......+..+..
T Consensus        53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~Ei~  106 (390)
T 2zmd_A           53 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD-------------------------NQTLDSYRNEIA  106 (390)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCC-------------------------HHHHHHHHHHHH
T ss_pred             ccCCceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEeccccc-------------------------HHHHHHHHHHHH
Confidence            45567999999999999999999875 4888888887653210                         001111111111


Q ss_pred             HHhhhc--CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          214 YRLSRA--APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       214 ~~l~~~--~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                       .+..+  +|+||+++++++...        +..+|||| +.+++|.+++...+                    .+++..
T Consensus       107 -~l~~l~~~~~~iv~~~~~~~~~--------~~~~lv~E-~~~~~L~~~l~~~~--------------------~~~~~~  156 (390)
T 2zmd_A          107 -YLNKLQQHSDKIIRLYDYEITD--------QYIYMVME-CGNIDLNSWLKKKK--------------------SIDPWE  156 (390)
T ss_dssp             -HHHHHTTTCTTBCCEEEEEECS--------SEEEEEEE-CCSEEHHHHHHHCS--------------------SCCHHH
T ss_pred             -HHHHcccCCCeEEEEEEEEecC--------CEEEEEEe-cCCCCHHHHHHhcC--------------------CCCHHH
Confidence             12233  379999999988763        35999999 56899999998764                    578888


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      ++.++.||+.||+|||+++|+||||||+|||++ ++.+||+|||+++........ ......||+.|+|||++.+.....
T Consensus       157 ~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  235 (390)
T 2zmd_A          157 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR  235 (390)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC----
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccc
Confidence            999999999999999999999999999999995 689999999999977544322 335567999999999997532211


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                      ..           ..-...++.++|||||||++|||++|..|+............           ..........+...
T Consensus       236 ~~-----------~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  293 (390)
T 2zmd_A          236 EN-----------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-----------IIDPNHEIEFPDIP  293 (390)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH-----------HHCTTSCCCCCCCS
T ss_pred             cc-----------cccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH-----------HhCccccCCCCccc
Confidence            00           000134667899999999999999999988654333222111           11111222334456


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      +.++.+|+.+||+   .||.+|||++|+++||||+....
T Consensus       294 ~~~~~~li~~~L~---~dP~~Rps~~ell~hp~~~~~~~  329 (390)
T 2zmd_A          294 EKDLQDVLKCCLK---RDPKQRISIPELLAHPYVQIQTH  329 (390)
T ss_dssp             CHHHHHHHHHHTC---SSTTTSCCHHHHHTSHHHHSCC-
T ss_pred             hHHHHHHHHHHcc---cChhhCCCHHHHhhCcCccccCc
Confidence            7899999999999   77799999999999999985543


No 118
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=3.6e-43  Score=354.99  Aligned_cols=263  Identities=17%  Similarity=0.217  Sum_probs=195.9

Q ss_pred             CCEEEE-eeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          137 TDFVIG-DKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       137 ~~~~~~-~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      +.|.+. +.||+|+||+||+|+...+|+.||+|++......                         ......+..+....
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~~e~~~l   82 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-------------------------QDCRAEILHEIAVL   82 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-------------------------EECHHHHHHHHHHH
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-------------------------hHHHHHHHHHHHHH
Confidence            456676 8999999999999999989999999988753210                         00011112222222


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      .....||||+++++++..        .+..++||||+++|+|.+++....                  ...+++..++.+
T Consensus        83 ~~l~~~~~iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~------------------~~~~~~~~~~~i  136 (327)
T 3lm5_A           83 ELAKSCPRVINLHEVYEN--------TSEIILILEYAAGGEIFSLCLPEL------------------AEMVSENDVIRL  136 (327)
T ss_dssp             HHTTTCTTBCCEEEEEEC--------SSEEEEEEECCTTEEGGGGGSSCC-------------------CCCCHHHHHHH
T ss_pred             HhccCCCCEEEEEEEEEe--------CCeEEEEEEecCCCcHHHHHHHhc------------------ccCCCHHHHHHH
Confidence            223367999999999865        346999999999999999986532                  235889999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTK---RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.||+.||+|||++||+||||||+|||++.   ++.+||+|||+++......  ......||+.|+|||++.+..     
T Consensus       137 ~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-----  209 (327)
T 3lm5_A          137 IKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDP-----  209 (327)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCC-----
T ss_pred             HHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc--ccccccCCcCccCCeeecCCC-----
Confidence            999999999999999999999999999987   7899999999998765432  223567999999999997543     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHH-HHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNME-IKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                       ++.++|||||||++|||++|..|+.......... +....           .......+...+
T Consensus       210 -----------------~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------~~~~~~~~~~~~  261 (327)
T 3lm5_A          210 -----------------ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN-----------VDYSEETFSSVS  261 (327)
T ss_dssp             -----------------CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----------CCCCTTTTTTSC
T ss_pred             -----------------CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc-----------cccCchhhcccC
Confidence                             4457799999999999999998875543322111 11111           111222345578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      ..+.+|+.+||+   .||++|||++++++||||+...
T Consensus       262 ~~~~~li~~~L~---~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          262 QLATDFIQSLLV---KNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             HHHHHHHHHHSC---SSGGGSCCHHHHTTCGGGCCCC
T ss_pred             HHHHHHHHHHcC---CChhhCcCHHHHhCCHhhcccc
Confidence            999999999999   7779999999999999998654


No 119
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.3e-43  Score=367.05  Aligned_cols=283  Identities=17%  Similarity=0.285  Sum_probs=185.8

Q ss_pred             CCEEE-EeeeeecCceEEEEEEEe--cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          137 TDFVI-GDKLGEGSFGVVYSGAIV--PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       137 ~~~~~-~~~IG~G~fG~Vy~g~~~--~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +.|.+ +++||+|+||+||+|++.  .+++.||+|++......      ....                        .+.
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~------~~~~------------------------~E~   69 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS------MSAC------------------------REI   69 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC------HHHH------------------------HHH
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC------HHHH------------------------HHH
Confidence            45776 568999999999999976  35778888877542110      0011                        112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++....      .+..+|||||++ |+|.+++.......           .......+++..++
T Consensus        70 ~~l~~l~hpniv~~~~~~~~~~------~~~~~lv~e~~~-~~l~~~~~~~~~~~-----------~~~~~~~l~~~~~~  131 (405)
T 3rgf_A           70 ALLRELKHPNVISLQKVFLSHA------DRKVWLLFDYAE-HDLWHIIKFHRASK-----------ANKKPVQLPRGMVK  131 (405)
T ss_dssp             HHHHHCCCTTBCCCCEEEEETT------TTEEEEEEECCS-EEHHHHHHHHHHHC------------------CCHHHHH
T ss_pred             HHHHhcCCCCeeeEeeEEecCC------CCeEEEEEeCCC-CCHHHHHHHhcccc-----------ccccccCCCHHHHH
Confidence            3355667999999999986532      346999999994 79999887542100           00112248999999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEE----ccCCcEEEeeccccccccCCCc--cCCCcccCCCCcCCcccccCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVL----TKRGQIKLIDFGAATDLRIGKN--YVPNRTLLDPDYCPPELYVLPE  367 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl----~~~~~~kL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~  367 (502)
                      .++.||+.||+|||+++|+||||||+|||+    +.++.+||+|||+|+.......  .......||+.|+|||++.+..
T Consensus       132 ~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  211 (405)
T 3rgf_A          132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGAR  211 (405)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCC
Confidence            999999999999999999999999999999    7789999999999987654321  1234567899999999987532


Q ss_pred             CCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch-----------hhHHHHHhhccC-hHHHH
Q 039267          368 ETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK-----------NFNMEIKTAQYD-LNKWR  435 (502)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~-----------~~~~~~~~~~~~-~~~~~  435 (502)
                                           .++.++|||||||++|||++|..|+.....           .+..++...+.. ...|.
T Consensus       212 ---------------------~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~  270 (405)
T 3rgf_A          212 ---------------------HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWE  270 (405)
T ss_dssp             ---------------------SCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCG
T ss_pred             ---------------------cccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcc
Confidence                                 245678999999999999999988754332           222222222221 11222


Q ss_pred             HhhhccCc-----------c----------ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          436 EYTRLRSD-----------F----------TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       436 ~~~~~~~~-----------~----------~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      ........           .          ......+.++.+||.+||+   +||.+|||++|+|+||||+......
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~---~dP~~R~ta~e~L~hp~f~~~~~~~  344 (405)
T 3rgf_A          271 DIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLT---MDPIKRITSEQAMQDPYFLEDPLPT  344 (405)
T ss_dssp             GGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSC---SSGGGSCCHHHHHTSGGGTSSSCCC
T ss_pred             hhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHcc---CCcccCCCHHHHhcChhhccCCCCc
Confidence            11110000           0          0011237789999999999   7889999999999999999765443


No 120
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1e-42  Score=361.25  Aligned_cols=278  Identities=23%  Similarity=0.301  Sum_probs=198.9

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ....+|.+.+.||+|+||+||+|++..++. ||+|.+.....        ....|.                        
T Consensus        37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~--------~~~~E~------------------------   83 (394)
T 4e7w_A           37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR--------FKNREL------------------------   83 (394)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT--------SCCHHH------------------------
T ss_pred             cccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc--------hHHHHH------------------------
Confidence            445679999999999999999999866555 77776653211        000111                        


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.|+||++++++|......  ......++||||+++ +|.+.+....                .....+++..++
T Consensus        84 ~il~~l~h~niv~l~~~~~~~~~~--~~~~~~~lv~e~~~~-~l~~~~~~~~----------------~~~~~~~~~~~~  144 (394)
T 4e7w_A           84 QIMRIVKHPNVVDLKAFFYSNGDK--KDEVFLNLVLEYVPE-TVYRASRHYA----------------KLKQTMPMLLIK  144 (394)
T ss_dssp             HHHHTCCCTTBCCEEEEEEEESSS--SSCEEEEEEEECCSE-EHHHHHHHHH----------------HTTSCCCHHHHH
T ss_pred             HHHHhCCCCCcceEEEEEEecCCC--CCceEEEEEeeccCc-cHHHHHHHHH----------------hhcCCCCHHHHH
Confidence            235556799999999998765321  112237899999965 5544443211                011358899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLT-KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      .++.||++||+|||++||+||||||+|||++ .++.+||+|||+|+....+..  .....||+.|+|||++.+.      
T Consensus       145 ~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~------  216 (394)
T 4e7w_A          145 LYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSYICSRYYRAPELIFGA------  216 (394)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSSCSCGGGCCHHHHTTC------
T ss_pred             HHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC--CcccccCcCccCHHHHcCC------
Confidence            9999999999999999999999999999999 799999999999987654432  2355789999999998653      


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--hhhHHHHHhhccChH-HHHHhhhccCc--c---
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--KNFNMEIKTAQYDLN-KWREYTRLRSD--F---  444 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~--~---  444 (502)
                                     ..++.++|||||||++|||++|..|+....  ..+..+.+..+.... .+.........  +   
T Consensus       217 ---------------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~  281 (394)
T 4e7w_A          217 ---------------TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQI  281 (394)
T ss_dssp             ---------------SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCC
T ss_pred             ---------------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccc
Confidence                           235567899999999999999988875443  233333433333222 22222111000  0   


Q ss_pred             -------ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          445 -------TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       445 -------~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                             ......++++.+|+.+||+   .||.+|||++|+++||||+....
T Consensus       282 ~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          282 RPHPFSKVFRPRTPPDAIDLISRLLE---YTPSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             CCCCHHHHSCTTCCHHHHHHHHHHCC---SSGGGSCCHHHHHTSGGGSTTTS
T ss_pred             cCCcHHHhccccCCHHHHHHHHHHhC---CChhhCCCHHHHhcChhhhhhcc
Confidence                   1223478899999999999   77799999999999999996544


No 121
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.3e-43  Score=347.27  Aligned_cols=263  Identities=20%  Similarity=0.272  Sum_probs=203.7

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|.+.+.||+|+||.||+|+...+++.||+|++......                         ..........
T Consensus         9 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~~~   63 (284)
T 2vgo_A            9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-------------------------KEGVEHQLRR   63 (284)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-------------------------HTTCHHHHHH
T ss_pred             cchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-------------------------hHHHHHHHHH
Confidence            346678899999999999999999999888888999887652110                         0000011111


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ....+..+.|+||+++++++...        +..++||||+++|+|.+++...+                    .+++..
T Consensus        64 e~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~  115 (284)
T 2vgo_A           64 EIEIQSHLRHPNILRMYNYFHDR--------KRIYLMLEFAPRGELYKELQKHG--------------------RFDEQR  115 (284)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEECS--------SEEEEEECCCTTEEHHHHHHHHS--------------------SCCHHH
T ss_pred             HHHHHhcCCCCCEeeEEEEEEcC--------CEEEEEEEeCCCCcHHHHHHhcC--------------------CCCHHH
Confidence            22345666899999999998653        46999999999999999998764                    578999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      +..++.|++.||+|||+++|+||||||+||+++.++.+||+|||++......   ......||+.|+|||++.+..    
T Consensus       116 ~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~----  188 (284)
T 2vgo_A          116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL---RRRTMCGTLDYLPPEMIEGKT----  188 (284)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS---CBCCCCSCGGGCCHHHHTTCC----
T ss_pred             HHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc---ccccccCCCCcCCHHHhccCC----
Confidence            9999999999999999999999999999999999999999999999765432   223557899999999997643    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                        ++.++||||||+++|||++|..|+..........            ...  ......+...+
T Consensus       189 ------------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------------~~~--~~~~~~~~~~~  236 (284)
T 2vgo_A          189 ------------------HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR------------RIV--NVDLKFPPFLS  236 (284)
T ss_dssp             ------------------BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------------HHH--TTCCCCCTTSC
T ss_pred             ------------------CCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH------------HHh--ccccCCCCcCC
Confidence                              3356799999999999999998875443221110            010  11223345578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      .++.+|+.+||+   .||.+|||++++++||||+....
T Consensus       237 ~~~~~li~~~l~---~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          237 DGSKDLISKLLR---YHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             HHHHHHHHHHSC---SSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             HHHHHHHHHHhh---cCHhhCCCHHHHhhCHHHHhhcc
Confidence            999999999999   77799999999999999985443


No 122
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=3.6e-43  Score=361.32  Aligned_cols=278  Identities=20%  Similarity=0.232  Sum_probs=187.8

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||.||+|.+..+|+.||||++.....                         ......... .....+
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~~~-~E~~~l   82 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-------------------------SIIHAKRTY-RELRLL   82 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS-------------------------SHHHHHHHH-HHHHHH
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-------------------------CHHHHHHHH-HHHHHH
Confidence            679999999999999999999988898999888764211                         000011111 112235


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++......  ...+..++|+||+ +++|.+++...                     .+++..++.++
T Consensus        83 ~~l~hpnIv~~~~~~~~~~~~--~~~~~~~lv~e~~-~~~L~~~~~~~---------------------~l~~~~~~~i~  138 (367)
T 2fst_X           83 KHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLM-GADLNNIVKCQ---------------------KLTDDHVQFLI  138 (367)
T ss_dssp             HHCCCTTBCCCSEEECSCSSG--GGCCCCEEEEECC-CEECC-----C---------------------CCCHHHHHHHH
T ss_pred             HhCCCCCCCcEEEEEecCCcc--ccCCeEEEEeccc-CCCHHHHHhcC---------------------CCCHHHHHHHH
Confidence            666799999999998754221  1124589999999 79999998753                     47899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....    .....||+.|+|||++.+.          
T Consensus       139 ~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~----------  204 (367)
T 2fst_X          139 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNW----------  204 (367)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------------------CCCTTCCHHHHTTC----------
T ss_pred             HHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc----CCCcCcCcCccChHHHcCC----------
Confidence            99999999999999999999999999999999999999999875432    2345789999999998752          


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHH---------HHHhhhccC---
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNK---------WREYTRLRS---  442 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~---  442 (502)
                                 ..++.++|||||||+++||++|..|+.....  .+..+....+.....         ........+   
T Consensus       205 -----------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  273 (367)
T 2fst_X          205 -----------MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP  273 (367)
T ss_dssp             -----------CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCC
T ss_pred             -----------cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCC
Confidence                       2345678999999999999999887754432  333333333332211         111111101   


Q ss_pred             cc---ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchh
Q 039267          443 DF---TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAA  492 (502)
Q Consensus       443 ~~---~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~  492 (502)
                      ..   ......++++.+|+.+||+   .||.+|||++|+|+||||+...+...
T Consensus       274 ~~~~~~~~~~~~~~~~dLl~~mL~---~dP~~R~t~~e~L~hp~~~~~~~~~~  323 (367)
T 2fst_X          274 KMNFANVFIGANPLAVDLLEKMLV---LDSDKRITAAQALAHAYFAQYHDPDD  323 (367)
T ss_dssp             CCCHHHHTTTCCHHHHHHHHHHSC---SSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred             CCCHHHHCCCCCHHHHHHHHHhCC---CCcccCcCHHHHhcChhhhhccCCCC
Confidence            00   1234568899999999999   78899999999999999997665543


No 123
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=4.5e-43  Score=352.98  Aligned_cols=269  Identities=20%  Similarity=0.272  Sum_probs=198.3

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++..+++.||||++.......               +...    .......+.. +...
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------~~~~----~~~~~~~~~~-E~~~   68 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAI---------------GSAR----EADPALNVET-EIEI   68 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC----------------------------------CHHH-HHHH
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhh---------------cccc----cchhhhhHHH-HHHH
Confidence            357999999999999999999999999999999987632110               0000    0000011111 1233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..         +..++||||+++|+|.+++...+                    .+++..++.+
T Consensus        69 l~~l~h~~i~~~~~~~~~---------~~~~lv~e~~~~~~L~~~~~~~~--------------------~~~~~~~~~~  119 (322)
T 2ycf_A           69 LKKLNHPCIIKIKNFFDA---------EDYYIVLELMEGGELFDKVVGNK--------------------RLKEATCKLY  119 (322)
T ss_dssp             HHHCCCTTBCCEEEEEES---------SSEEEEEECCTTEETHHHHSTTC--------------------CCCHHHHHHH
T ss_pred             HHhCCCCCCceEeeEEcC---------CceEEEEecCCCCcHHHHHhccC--------------------CCCHHHHHHH
Confidence            566789999999998753         24899999999999999997553                    5789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ---IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~---~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.||+.||+|||+++|+||||||+|||++.++.   +||+|||+++......  ......||+.|+|||++....     
T Consensus       120 ~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~-----  192 (322)
T 2ycf_A          120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVG-----  192 (322)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTT-----
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccc--ccccccCCcCccCchhhccCC-----
Confidence            999999999999999999999999999987664   9999999998764332  122456899999999975311     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                    ...++.++|||||||++|||++|..|+......  ....+.......           ....+...
T Consensus       193 --------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  247 (322)
T 2ycf_A          193 --------------TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF-----------IPEVWAEV  247 (322)
T ss_dssp             --------------TTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC-----------CHHHHTTS
T ss_pred             --------------CCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc-----------Cchhhhhc
Confidence                          123556889999999999999999887544322  222222221111           01122346


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      ++++.+|+.+||+   .||++|||++++++||||+...
T Consensus       248 ~~~~~~li~~~l~---~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          248 SEKALDLVKKLLV---VDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             CHHHHHHHHHHSC---SSTTTSCCHHHHHTSGGGCCHH
T ss_pred             CHHHHHHHHHHcc---cCHhhCCCHHHHhhCcCcCCHH
Confidence            8999999999999   7779999999999999998543


No 124
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=4.4e-43  Score=347.93  Aligned_cols=269  Identities=19%  Similarity=0.262  Sum_probs=190.6

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||.||+|+...+|+.||+|++....                            .....+. .....+
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------------------------~~~~~~~-~E~~~l   56 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----------------------------EKLSTIL-SEVMLL   56 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH----------------------------HHHHHHH-HHHHHH
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH----------------------------HHHHHHH-HHHHHH
Confidence            47999999999999999999998889999998875311                            0001111 112335


Q ss_pred             hhcCCccccccccccccccC-----CccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          217 SRAAPETCAEFLGSFVADKT-----NSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~-----~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ..+.||||+++++.+.....     ......+..++||||+++|+|.+++...+                   ..+++..
T Consensus        57 ~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~~  117 (303)
T 1zy4_A           57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-------------------LNQQRDE  117 (303)
T ss_dssp             TTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC-------------------GGGCHHH
T ss_pred             HhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc-------------------cccchHH
Confidence            66679999999998865321     11122456899999999999999998653                   2467888


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCC-------------ccCCCcccCCCCcC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGK-------------NYVPNRTLLDPDYC  358 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~-------------~~~~~~~~gt~~y~  358 (502)
                      ++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++......             ........||+.|+
T Consensus       118 ~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  197 (303)
T 1zy4_A          118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV  197 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTS
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCccccc
Confidence            99999999999999999999999999999999999999999999998764321             11223456899999


Q ss_pred             CcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhh
Q 039267          359 PPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYT  438 (502)
Q Consensus       359 aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (502)
                      |||++.+.                     ..++.++|||||||++|||+++..   ..............        . 
T Consensus       198 aPE~~~~~---------------------~~~~~~~Di~slG~il~~l~~p~~---~~~~~~~~~~~~~~--------~-  244 (303)
T 1zy4_A          198 ATEVLDGT---------------------GHYNEKIDMYSLGIIFFEMIYPFS---TGMERVNILKKLRS--------V-  244 (303)
T ss_dssp             CHHHHTSC---------------------SCCCTHHHHHHHHHHHHHHHSCCS---SHHHHHHHHHHHHS--------T-
T ss_pred             CcccccCC---------------------CCCcchhhHHHHHHHHHHHHhccC---CchhHHHHHHhccc--------c-
Confidence            99998742                     134567899999999999998322   22211111100000        0 


Q ss_pred             hccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          439 RLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       439 ~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      ............+..+.+|+.+||+   .||.+|||++++++||||+....
T Consensus       245 ~~~~~~~~~~~~~~~~~~li~~~l~---~dp~~Rps~~~ll~h~~~~~~~~  292 (303)
T 1zy4_A          245 SIEFPPDFDDNKMKVEKKIIRLLID---HDPNKRPGARTLLNSGWLPVKHQ  292 (303)
T ss_dssp             TCCCCTTCCTTTSHHHHHHHHHHTC---SSGGGSCCHHHHHHSSCSCCCCH
T ss_pred             ccccCccccccchHHHHHHHHHHHh---cCcccCcCHHHHhCCCCcCCCCh
Confidence            0001112334567789999999999   77799999999999999986543


No 125
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.4e-42  Score=344.72  Aligned_cols=276  Identities=21%  Similarity=0.254  Sum_probs=204.4

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++..+|+.||+|++.......       ...+.           ..........+. ..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~-----------~~~~~~~~~~e~-~~   76 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGS-------FSAEE-----------VQELREATLKEV-DI   76 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTT-------CCHHH-----------HHHHHHHHHHHH-HH
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccc-------cCHHH-----------HHHHHHHHHHHH-HH
Confidence            468999999999999999999998899999999987643210       00000           000001111111 22


Q ss_pred             hhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          216 LSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       216 l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      +..+ .||||+++++++..        .+..++||||+++++|.+++....                    .+++..++.
T Consensus        77 l~~l~~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~  128 (298)
T 1phk_A           77 LRKVSGHPNIIQLKDTYET--------NTFFFLVFDLMKKGELFDYLTEKV--------------------TLSEKETRK  128 (298)
T ss_dssp             HHHHTTCTTBCCEEEEEEC--------SSEEEEEEECCTTCBHHHHHHHHS--------------------SCCHHHHHH
T ss_pred             HHHhcCCCCEeeeeeeecc--------CCeEEEEEeccCCCcHHHHHhccC--------------------CCCHHHHHH
Confidence            4444 49999999998865        346999999999999999998653                    578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++......  ......||+.|+|||++.+.....    
T Consensus       129 ~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~----  202 (298)
T 1phk_A          129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDN----  202 (298)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTT----
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCc--ccccccCCccccCHHHhccccccc----
Confidence            99999999999999999999999999999999999999999998765433  234567899999999986321111    


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH-HHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM-EIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                  ...++.++||||||+++|||++|..|+......... .+.....           ....+.+...+.+
T Consensus       203 ------------~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~  259 (298)
T 1phk_A          203 ------------HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY-----------QFGSPEWDDYSDT  259 (298)
T ss_dssp             ------------SCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-----------CCCTTTGGGSCHH
T ss_pred             ------------cccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc-----------ccCcccccccCHH
Confidence                        123567889999999999999999887544322111 1111111           1111223457899


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      +.+|+.+||+   .||++|||++++++||||++...+
T Consensus       260 l~~li~~~l~---~dp~~Rps~~~ll~h~~~~~~~~~  293 (298)
T 1phk_A          260 VKDLVSRFLV---VQPQKRYTAEEALAHPFFQQYVVE  293 (298)
T ss_dssp             HHHHHHHHCC---SSGGGSCCHHHHTTSGGGCTTC--
T ss_pred             HHHHHHHHcc---CCcccCCCHHHHHhChHhhhccch
Confidence            9999999999   777999999999999999976543


No 126
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=4.5e-43  Score=360.69  Aligned_cols=278  Identities=19%  Similarity=0.256  Sum_probs=191.5

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|....+|+.||||++.....                         ......... .....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~~~-~E~~~   77 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-------------------------NQTHAKRAY-RELVL   77 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-------------------------SHHHHHHHH-HHHHH
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-------------------------ChHHHHHHH-HHHHH
Confidence            4689999999999999999999988898999988765211                         000001111 11223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++......  ......++||||++ |+|.+++..                      .+++..+..+
T Consensus        78 l~~l~hpniv~~~~~~~~~~~~--~~~~~~~lv~e~~~-~~l~~~~~~----------------------~~~~~~~~~i  132 (371)
T 2xrw_A           78 MKCVNHKNIIGLLNVFTPQKSL--EEFQDVYIVMELMD-ANLCQVIQM----------------------ELDHERMSYL  132 (371)
T ss_dssp             HHHCCCTTBCCEEEEECSCCST--TTCCEEEEEEECCS-EEHHHHHHS----------------------CCCHHHHHHH
T ss_pred             HHhcCCCCccceEEeecccccc--ccccceEEEEEcCC-CCHHHHHhh----------------------ccCHHHHHHH
Confidence            5566899999999998764321  12335899999995 689888862                      3678899999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      +.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+..        
T Consensus       133 ~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--------  202 (371)
T 2xrw_A          133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMG--------  202 (371)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC------------------CTTCCHHHHTTCC--------
T ss_pred             HHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--ccCCceecCCccCHHHhcCCC--------
Confidence            9999999999999999999999999999999999999999998754332  234567899999999997643        


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHHH--------HHhhhccCccc
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNKW--------REYTRLRSDFT  445 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~  445 (502)
                                    ++.++|||||||++|||++|..|+.....  .+.......+...+.+        .......+...
T Consensus       203 --------------~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (371)
T 2xrw_A          203 --------------YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYA  268 (371)
T ss_dssp             --------------CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCC
T ss_pred             --------------CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcccc
Confidence                          44567999999999999999888755432  2222222222211111        11111111100


Q ss_pred             ------------------cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          446 ------------------ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       446 ------------------~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                                        .....+.++++|+.+||+   .||++|||++|+++||||+...+..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~---~dP~~R~t~~e~l~hp~~~~~~~~~  329 (371)
T 2xrw_A          269 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV---IDASKRISVDEALQHPYINVWYDPS  329 (371)
T ss_dssp             CCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC---SSGGGSCCHHHHHHSHHHHTTCCHH
T ss_pred             ccchhhhcccccCcccccccccccHHHHHHHHHHCc---CChhhCCCHHHHhCCcchhhhcCcc
Confidence                              001125788999999999   7779999999999999998765543


No 127
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=3.2e-43  Score=352.55  Aligned_cols=269  Identities=17%  Similarity=0.145  Sum_probs=196.0

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++....... ......+..|                        .
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E------------------------~   63 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD-PSFYLRFRRE------------------------A   63 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS-HHHHHHHHHH------------------------H
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC-HHHHHHHHHH------------------------H
Confidence            34568999999999999999999998899999999887532210 0000111112                        2


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++......    ....++||||+++|+|.+++...+                    .+++..++
T Consensus        64 ~~l~~l~hp~iv~~~~~~~~~~~~----~~~~~lv~e~~~g~~L~~~l~~~~--------------------~~~~~~~~  119 (311)
T 3ork_A           64 QNAAALNHPAIVAVYDTGEAETPA----GPLPYIVMEYVDGVTLRDIVHTEG--------------------PMTPKRAI  119 (311)
T ss_dssp             TTCCCCCCTTBCCEEEEEEEEETT----EEEEEEEEECCCEEEHHHHHHHHC--------------------SCCHHHHH
T ss_pred             HHHHcCCCCCcceEEEeeeccCCC----CcccEEEEecCCCCCHHHHHHhcC--------------------CCCHHHHH
Confidence            235556799999999998765431    123599999999999999998654                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........  ......||+.|+|||++.+..    
T Consensus       120 ~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----  195 (311)
T 3ork_A          120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS----  195 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCC----
T ss_pred             HHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCC----
Confidence            99999999999999999999999999999999999999999999876543222  233456899999999997643    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                        ++.++|||||||++|||++|..|+..................          +........+
T Consensus       196 ------------------~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  247 (311)
T 3ork_A          196 ------------------VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI----------PPSARHEGLS  247 (311)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC----------CHHHHSTTCC
T ss_pred             ------------------CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC----------CcccccCCCC
Confidence                              445679999999999999999987654432221111111110          1111234468


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      .++.+|+.+||+   .||++||++.++++|+|++.
T Consensus       248 ~~l~~li~~~l~---~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          248 ADLDAVVLKALA---KNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHHHHHHHTC---SSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh---cCHhhChhhHHHHHHHHHHH
Confidence            999999999999   77799999999999999984


No 128
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1.1e-42  Score=347.14  Aligned_cols=258  Identities=21%  Similarity=0.278  Sum_probs=200.1

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|+...+|+.||+|+++......          .                 ..+ ..+...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~-----------------~~~-~~e~~~   59 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR----------D-----------------SSL-ENEIAV   59 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------------------------------HH-HHHHHH
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccc----------h-----------------HHH-HHHHHH
Confidence            357999999999999999999998899999999887532100          0                 001 111233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..        .+..++||||+++++|.+++...+                    .+++..+..+
T Consensus        60 l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~~  111 (304)
T 2jam_A           60 LKKIKHENIVTLEDIYES--------TTHYYLVMQLVSGGELFDRILERG--------------------VYTEKDASLV  111 (304)
T ss_dssp             HHHCCCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHHS--------------------CCCHHHHHHH
T ss_pred             HHhCCCCCeeehhhhccc--------CCEEEEEEEcCCCccHHHHHHHcC--------------------CCCHHHHHHH
Confidence            556689999999998865        346999999999999999998654                    5788999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVL---TKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.|++.||+|||+.+|+||||||+|||+   +.++.+||+|||+++.....   ......||+.|+|||++.+..     
T Consensus       112 ~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~-----  183 (304)
T 2jam_A          112 IQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKP-----  183 (304)
T ss_dssp             HHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---TTHHHHSCCCBCCTTTBSSCS-----
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---ccccccCCCCccChHHhccCC-----
Confidence            9999999999999999999999999999   78899999999999864332   223456899999999997543     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                       ++.++||||||+++|||++|..|+........ ..+.....           ......++..+
T Consensus       184 -----------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-----------~~~~~~~~~~~  235 (304)
T 2jam_A          184 -----------------YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY-----------EFESPFWDDIS  235 (304)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC-----------CCCTTTTTTSC
T ss_pred             -----------------CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----------CCCccccccCC
Confidence                             34567999999999999999988765433211 11111111           11122345678


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      +++.+|+.+||+   .||++|||++++++||||+...
T Consensus       236 ~~~~~li~~~l~---~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          236 ESAKDFICHLLE---KDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             HHHHHHHHHHHC---SSTTTSCCHHHHHTSHHHHSSC
T ss_pred             HHHHHHHHHHcC---CChhHCcCHHHHhcCccccCCC
Confidence            999999999999   7779999999999999998543


No 129
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=6.6e-43  Score=349.66  Aligned_cols=284  Identities=19%  Similarity=0.219  Sum_probs=196.1

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++..+|+.||+|++.....                           .....+. .+...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~-~e~~~   61 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP---------------------------QSVKHAL-REIKI   61 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSH---------------------------HHHHHHH-HHHHH
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCCh---------------------------HHHHHHH-HHHHH
Confidence            4679999999999999999999988899999987764210                           0001111 11233


Q ss_pred             hhhcCCccccccccccccccC------CccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          216 LSRAAPETCAEFLGSFVADKT------NSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~------~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      +..+.||||+++++++.....      ......+..++||||++ |+|.+++...                     .+++
T Consensus        62 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---------------------~~~~  119 (320)
T 2i6l_A           62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQG---------------------PLLE  119 (320)
T ss_dssp             HHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTC---------------------CCCH
T ss_pred             HHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcC---------------------CccH
Confidence            566689999999998754321      11123457899999996 7999999753                     4788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEeeccccccccCCCc--cCCCcccCCCCcCCcccccCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLT-KRGQIKLIDFGAATDLRIGKN--YVPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~-~~~~~kL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~  366 (502)
                      ..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||+++.......  .......+|..|+|||++...
T Consensus       120 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  199 (320)
T 2i6l_A          120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP  199 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCc
Confidence            89999999999999999999999999999999997 567999999999987643211  123445679999999988642


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHHhhcc-ChHHHHHhhhc---
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIKTAQY-DLNKWREYTRL---  440 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~---  440 (502)
                                           ..++.++|||||||++|||++|..|+.......  ......... ....+......   
T Consensus       200 ---------------------~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (320)
T 2i6l_A          200 ---------------------NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPV  258 (320)
T ss_dssp             ---------------------TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCH
T ss_pred             ---------------------ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcc
Confidence                                 234567899999999999999998876544322  222221111 11112111110   


Q ss_pred             ----------cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchhH
Q 039267          441 ----------RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAAA  493 (502)
Q Consensus       441 ----------~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~~  493 (502)
                                .+.....+..+.++.+|+.+||+   .||++|||++|+++||||+...-+..+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~~~~~~~p~~~  318 (320)
T 2i6l_A          259 YIRNDMTEPHKPLTQLLPGISREAVDFLEQILT---FSPMDRLTAEEALSHPYMSIYSFPMDE  318 (320)
T ss_dssp             HHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSC---SSGGGSCCHHHHHTSHHHHTTCC----
T ss_pred             cccccccCCCCChhHhcchhhHHHHHHHHHHcC---CCccccCCHHHHhCCcccccccCccCC
Confidence                      00111334579999999999999   777999999999999999976655443


No 130
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=7e-43  Score=375.50  Aligned_cols=268  Identities=19%  Similarity=0.212  Sum_probs=206.3

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+.+.||+|+||.||+|++..+|+.||+|++.+....          .              ........ .+
T Consensus       181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~----------~--------------~~~~~~~~-~E  235 (543)
T 3c4z_A          181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK----------K--------------RKGYQGAM-VE  235 (543)
T ss_dssp             CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH----------H--------------TTCHHHHH-HH
T ss_pred             cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh----------h--------------hHHHHHHH-HH
Confidence            45678999999999999999999999989999999988752110          0              00000111 11


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++..        .+..++||||+++|+|.+++...+.                ....+++..+
T Consensus       236 ~~iL~~l~hp~Iv~l~~~~~~--------~~~l~lVmE~~~gg~L~~~l~~~~~----------------~~~~l~e~~~  291 (543)
T 3c4z_A          236 KKILAKVHSRFIVSLAYAFET--------KTDLCLVMTIMNGGDIRYHIYNVDE----------------DNPGFQEPRA  291 (543)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEC--------SSEEEEEECCCTTCBHHHHHHTSST----------------TSCSCCHHHH
T ss_pred             HHHHHhcCCCCEeeEEEEEee--------CCEEEEEEEeccCCCHHHHHHHhhc----------------ccccccHHHH
Confidence            123556789999999998865        3469999999999999999986531                1235889999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.+|.+||+|||+++....... .....+||+.|+|||++.+..     
T Consensus       292 ~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~-----  365 (543)
T 3c4z_A          292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMAPELLLGEE-----  365 (543)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-CBCCCCSCTTTSCHHHHTTCC-----
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-ccccccCCccccChhhhcCCC-----
Confidence            99999999999999999999999999999999999999999999997654432 234458999999999997633     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                       ++.++|||||||++|||++|..|+......  ......          ...  ......+...
T Consensus       366 -----------------~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~----------~i~--~~~~~~p~~~  416 (543)
T 3c4z_A          366 -----------------YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ----------RVL--EQAVTYPDKF  416 (543)
T ss_dssp             -----------------BCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH----------HHH--HCCCCCCTTS
T ss_pred             -----------------CChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH----------HHh--hcccCCCccc
Confidence                             456789999999999999999987654321  111111          011  1122344567


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcC-----HHHHhcCCccccC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLS-----AAAALRHPYFLLG  487 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps-----~~evl~HP~f~~~  487 (502)
                      +.++.+|+.+||+   .||.+||+     ++++++||||+..
T Consensus       417 s~~~~~li~~lL~---~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          417 SPASKDFCEALLQ---KDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             CHHHHHHHHHHSC---SSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHhcc---CCHhHCCCCcccCHHHHHcCccccCC
Confidence            9999999999999   77799996     5899999999853


No 131
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.5e-42  Score=345.69  Aligned_cols=264  Identities=22%  Similarity=0.287  Sum_probs=199.1

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||.||+|++..+|+.||+|.+.....      ..                       .+.. ..
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~-----------------------~~~~-e~   75 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD------LQ-----------------------EIIK-EI   75 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC------CH-----------------------HHHH-HH
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH------HH-----------------------HHHH-HH
Confidence            456789999999999999999999988899999998865211      00                       1111 11


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.|+||+++++++...        +..++||||+++++|.+++....                   ..+++..++
T Consensus        76 ~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~-------------------~~~~~~~~~  128 (314)
T 3com_A           76 SIMQQCDSPHVVKYYGSYFKN--------TDLWIVMEYCGAGSVSDIIRLRN-------------------KTLTEDEIA  128 (314)
T ss_dssp             HHHHTCCCTTBCCEEEEEEET--------TEEEEEEECCTTEEHHHHHHHHT-------------------CCCCHHHHH
T ss_pred             HHHHhCCCCCCccEEEEEEeC--------CEEEEEeecCCCCCHHHHHHhcC-------------------CCCCHHHHH
Confidence            235566899999999998753        35999999999999999997542                   257899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+.+|+|+||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..      
T Consensus       129 ~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~------  201 (314)
T 3com_A          129 TILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEIG------  201 (314)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-CBCCCCSCGGGCCHHHHSSSC------
T ss_pred             HHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-ccCccCCCCCccChhhcCCCC------
Confidence            9999999999999999999999999999999999999999999987654322 234557899999999987643      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                      ++.++||||||+++|||++|..|+............           .......+......+.+
T Consensus       202 ----------------~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~  254 (314)
T 3com_A          202 ----------------YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI-----------PTNPPPTFRKPELWSDN  254 (314)
T ss_dssp             ----------------BCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----------HHSCCCCCSSGGGSCHH
T ss_pred             ----------------CCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-----------hcCCCcccCCcccCCHH
Confidence                            345679999999999999999887644322111110           01111223334456899


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      +.+|+.+||+   .||.+|||++++++||||+......
T Consensus       255 l~~li~~~l~---~dp~~Rpt~~~ll~~~~~~~~~~~~  289 (314)
T 3com_A          255 FTDFVKQCLV---KSPEQRATATQLLQHPFVRSAKGVS  289 (314)
T ss_dssp             HHHHHHHHTC---SCTTTSCCHHHHTTSHHHHTCCCGG
T ss_pred             HHHHHHHHcc---CChhhCcCHHHHHhCHHHhcCCcch
Confidence            9999999999   7779999999999999999765443


No 132
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=9e-43  Score=343.45  Aligned_cols=264  Identities=21%  Similarity=0.293  Sum_probs=198.9

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||.||+|+...+|+.||+|+++.........                     ......+ ..+...
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~---------------------~~~~~~~-~~E~~~   61 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRR---------------------GVSREEI-EREVNI   61 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSS---------------------SBCHHHH-HHHHHH
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccccccc---------------------chHHHHH-HHHHHH
Confidence            356999999999999999999998899999999988643211000                     0000111 112233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++++..        .+..++||||+++++|.+++...+                    .+++..+..+
T Consensus        62 l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~~  113 (283)
T 3bhy_A           62 LREIRHPNIITLHDIFEN--------KTDVVLILELVSGGELFDFLAEKE--------------------SLTEDEATQF  113 (283)
T ss_dssp             HHHCCCTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHS--------------------SCCHHHHHHH
T ss_pred             HHhCCCCCeeehhheecC--------CCeEEEEEeecCCCcHHHHHHhcC--------------------CCCHHHHHHH
Confidence            566679999999999865        335999999999999999998653                    5789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCC----cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRG----QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~----~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      +.||+.||+|||+++|+||||||+||+++.++    .+||+|||+++.......  .....||+.|+|||++.+..    
T Consensus       114 ~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~----  187 (283)
T 3bhy_A          114 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEP----  187 (283)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------CCCGGGCCHHHHTTCC----
T ss_pred             HHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCc--ccccCCCcCccCcceecCCC----
Confidence            99999999999999999999999999998877    899999999987654332  23456899999999987543    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH-HHHhhccChHHHHHhhhccCccccccCC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM-EIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                        ++.++||||||+++|||++|..|+......... .+......           .........
T Consensus       188 ------------------~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  238 (283)
T 3bhy_A          188 ------------------LGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD-----------FDEEYFSNT  238 (283)
T ss_dssp             ------------------CCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC-----------CCHHHHTTC
T ss_pred             ------------------CCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC-----------CcchhcccC
Confidence                              345679999999999999999887654322111 11111111           011123456


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      ++.+.+|+.+||+   .||++|||++++++||||+..
T Consensus       239 ~~~~~~li~~~l~---~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          239 SELAKDFIRRLLV---KDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             CHHHHHHHHTTSC---SSGGGSCCHHHHHHCHHHHHH
T ss_pred             CHHHHHHHHHHcc---CCHhHCcCHHHHHhCHHHHHH
Confidence            8899999999999   777999999999999999854


No 133
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=7.3e-43  Score=360.01  Aligned_cols=258  Identities=16%  Similarity=0.228  Sum_probs=198.7

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .|++..++|.+.+.||+|+||.||+|++..+++.||||+++....   ......+.+|.                     
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~---------------------  163 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP---PDLKAKFLQEA---------------------  163 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC---HHHHTTTTHHH---------------------
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC---HHHHHHHHHHH---------------------
Confidence            577888999999999999999999999988899999998764211   00011111222                     


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                         ..+..+.||||+++++++...        +..++||||+++|+|.+++...+                   ..+++.
T Consensus       164 ---~~l~~l~hpniv~~~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~~~  213 (377)
T 3cbl_A          164 ---RILKQYSHPNIVRLIGVCTQK--------QPIYIVMELVQGGDFLTFLRTEG-------------------ARLRVK  213 (377)
T ss_dssp             ---HHHTTCCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHHHG-------------------GGCCHH
T ss_pred             ---HHHHhCCCCCEEEEEEEEecC--------CCcEEEEEcCCCCCHHHHHHhcC-------------------CCCCHH
Confidence               235556799999999998653        35999999999999999998653                   257889


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccC-CCcccCCCCcCCcccccCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYV-PNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      .+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....+.... .....+++.|+|||++....  
T Consensus       214 ~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  291 (377)
T 3cbl_A          214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR--  291 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCE--
T ss_pred             HHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCC--
Confidence            999999999999999999999999999999999999999999999998754432221 12234577899999987533  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++|||||||++|||++ |..|+..............             ....+.+.
T Consensus       292 --------------------~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~-------------~~~~~~~~  338 (377)
T 3cbl_A          292 --------------------YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK-------------GGRLPCPE  338 (377)
T ss_dssp             --------------------EEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT-------------TCCCCCCT
T ss_pred             --------------------CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-------------CCCCCCCC
Confidence                                3456799999999999998 8777654433222111111             12233455


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      .+++++.+|+.+||+   .||++|||++++++
T Consensus       339 ~~~~~l~~li~~cl~---~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          339 LCPDAVFRLMEQCWA---YEPGQRPSFSTIYQ  367 (377)
T ss_dssp             TCCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcC---CCchhCcCHHHHHH
Confidence            678999999999999   77799999999975


No 134
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1.1e-42  Score=358.99  Aligned_cols=278  Identities=21%  Similarity=0.255  Sum_probs=194.1

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      +...++|.+.+.||+|+||+||+|++..+++.||||+++....     .......|..+++.+.                
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~----------------  108 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-----FLNQAQIEVRLLELMN----------------  108 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHH-----HHHHHHHHHHHHHHHH----------------
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHH-----HHHHHHHHHHHHHHHH----------------
Confidence            3446789999999999999999999988899999998864110     0000111111111110                


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                        ......|++|+.+++.+...        +..+|||||++ |+|.+++.....                  ..+++..+
T Consensus       109 --~~~~~~~~~iv~~~~~~~~~--------~~~~lv~e~~~-~~L~~~l~~~~~------------------~~~~~~~~  159 (382)
T 2vx3_A          109 --KHDTEMKYYIVHLKRHFMFR--------NHLCLVFEMLS-YNLYDLLRNTNF------------------RGVSLNLT  159 (382)
T ss_dssp             --HCSSGGGGGBCCEEEEEEET--------TEEEEEEECCC-CBHHHHHHHTTT------------------SCCCHHHH
T ss_pred             --hcccccceeEEEeeeeeccC--------CceEEEEecCC-CCHHHHHhhcCc------------------CCCCHHHH
Confidence              11122344688888888653        46999999995 699999987631                  24789999


Q ss_pred             HHHHHHHHHHHHHHH--HcCCeeccCCCCcEEEc--cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCC
Q 039267          293 KQILRQIITSLKKIH--DTGIVHRDVKPANLVLT--KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       293 ~~i~~qia~gL~yLH--~~~IiHrDlKp~NILl~--~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      +.++.|++.||+|||  +.+|+||||||+|||++  .++.+||+|||+++.....    .....||+.|+|||++.+.. 
T Consensus       160 ~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~-  234 (382)
T 2vx3_A          160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMP-  234 (382)
T ss_dssp             HHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc----cccccCCccccChHHHcCCC-
Confidence            999999999999999  46999999999999995  4788999999999876432    23567899999999997643 


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHHHHHhh-------h
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNKWREYT-------R  439 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~  439 (502)
                                           ++.++|||||||++|||++|..|+.....  ....+....+.....+....       .
T Consensus       235 ---------------------~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (382)
T 2vx3_A          235 ---------------------YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFE  293 (382)
T ss_dssp             ---------------------CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEE
T ss_pred             ---------------------CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHH
Confidence                                 44677999999999999999988765432  22333333332222211100       0


Q ss_pred             ccCc--------------ccc---------------------------ccCCchHHHHHHHHhhhccCCCCCCCcCHHHH
Q 039267          440 LRSD--------------FTI---------------------------LDLDSGRGWDLATKLISERGFLRRGRLSAAAA  478 (502)
Q Consensus       440 ~~~~--------------~~~---------------------------~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~ev  478 (502)
                      ..+.              ...                           ....++++.+||.+||+   .||++|||++|+
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~---~dP~~Rpta~e~  370 (382)
T 2vx3_A          294 KLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLD---YDPKTRIQPYYA  370 (382)
T ss_dssp             ECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTC---SCTTTSCCHHHH
T ss_pred             hccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcC---CChhhCCCHHHH
Confidence            0000              000                           00011478999999999   888999999999


Q ss_pred             hcCCccccCCC
Q 039267          479 LRHPYFLLGGD  489 (502)
Q Consensus       479 l~HP~f~~~~~  489 (502)
                      |+||||+...+
T Consensus       371 L~hp~f~~~~~  381 (382)
T 2vx3_A          371 LQHSFFKKTAD  381 (382)
T ss_dssp             TTSGGGCC---
T ss_pred             hcCcccccCCC
Confidence            99999987543


No 135
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=2.4e-42  Score=355.26  Aligned_cols=276  Identities=22%  Similarity=0.250  Sum_probs=199.1

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||.||+|++..+|+.||+|++......                         ...... .......+
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~-~~~E~~~l   95 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-------------------------EIFAKR-AYRELLLL   95 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS-------------------------HHHHHH-HHHHHHHH
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccc-------------------------hhHHHH-HHHHHHHH
Confidence            6899999999999999999999889999999887652210                         000011 11122345


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++........  ....++||||++ ++|.+++..                      .+++..++.++
T Consensus        96 ~~l~h~niv~~~~~~~~~~~~~~--~~~~~lv~e~~~-~~l~~~~~~----------------------~~~~~~~~~i~  150 (371)
T 4exu_A           96 KHMQHENVIGLLDVFTPASSLRN--FYDFYLVMPFMQ-TDLQKIMGM----------------------EFSEEKIQYLV  150 (371)
T ss_dssp             HHCCCTTBCCCSEEECSCSSSTT--CCCCEEEEECCC-EEHHHHTTS----------------------CCCHHHHHHHH
T ss_pred             HhcCCCCchhhhhheeccCCccc--ceeEEEEEcccc-ccHHHHhhc----------------------CCCHHHHHHHH
Confidence            66679999999999876543111  113599999995 799888742                      37899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....    .....||+.|+|||++.+.          
T Consensus       151 ~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~----------  216 (371)
T 4exu_A          151 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSW----------  216 (371)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC------------CTTCCCTTSCHHHHSCC----------
T ss_pred             HHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC----cCCcccCccccCHHHhcCC----------
Confidence            99999999999999999999999999999999999999999865432    2345789999999998752          


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHHHHHh---------hhc---cC
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNKWREY---------TRL---RS  442 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~---~~  442 (502)
                                 ..++.++|||||||++|||++|..|+.....  .........+.....+...         ...   ..
T Consensus       217 -----------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (371)
T 4exu_A          217 -----------MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP  285 (371)
T ss_dssp             -----------SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCC
T ss_pred             -----------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCc
Confidence                       2344677999999999999999988765432  2233333333322221110         000   00


Q ss_pred             ---ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          443 ---DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       443 ---~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                         ....++..++++.+|+.+||+   .||++|||++|+++||||+...+..
T Consensus       286 ~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~f~~~~~~~  334 (371)
T 4exu_A          286 RKDFTQLFPRASPQAADLLEKMLE---LDVDKRLTAAQALTHPFFEPFRDPE  334 (371)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHSC---SCTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred             chhHHHhccccChHHHHHHHHHCC---CChhhcCCHHHHhcCcccccCCCcc
Confidence               011234578999999999999   7889999999999999999665443


No 136
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.9e-42  Score=347.03  Aligned_cols=276  Identities=20%  Similarity=0.286  Sum_probs=198.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|++.+.||+|+||.||+|++..+|+.||+|++......                         .   ..+..+..
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------------------------~---~~~~~e~~   72 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-------------------------E---EEIKQEIN   72 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST-------------------------T---HHHHHHHH
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc-------------------------H---HHHHHHHH
Confidence            4567899999999999999999999889999999988653210                         0   01111111


Q ss_pred             HHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          214 YRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       214 ~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                       .+..+ .|+||+++++++.......  ..+..++||||+++|+|.+++....                  ...+++..+
T Consensus        73 -~l~~l~~h~~i~~~~~~~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~  131 (326)
T 2x7f_A           73 -MLKKYSHHRNIATYYGAFIKKNPPG--MDDQLWLVMEFCGAGSVTDLIKNTK------------------GNTLKEEWI  131 (326)
T ss_dssp             -HHHHHCCSTTBCCEEEEEEECC--C--CCCEEEEEEECCTTEEHHHHHHHSG------------------GGCCCHHHH
T ss_pred             -HHHhccCCCCeeeeeeEEeeccCcc--ccceEEEEEEcCCCCcHHHHHHhcc------------------cCCCCHHHH
Confidence             23333 6999999999987643211  1346899999999999999998642                  125788999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++......   
T Consensus       132 ~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~---  207 (326)
T 2x7f_A          132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENP---  207 (326)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC--------------CCGGGCCHHHHC--------
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc-ccccccCCccccChhhhcccccc---
Confidence            99999999999999999999999999999999999999999999987643221 23345789999999998742211   


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                    ...++.++|||||||++|||++|..|+............            .............+.
T Consensus       208 --------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~  261 (326)
T 2x7f_A          208 --------------DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI------------PRNPAPRLKSKKWSK  261 (326)
T ss_dssp             -----------------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH------------HHSCCCCCSCSCSCH
T ss_pred             --------------CcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh------------hcCccccCCccccCH
Confidence                          123557789999999999999999887544322111100            000011112345689


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      .+.+|+.+||.   .||.+|||++++++||||++.....
T Consensus       262 ~l~~li~~~l~---~dp~~Rps~~~ll~hp~~~~~~~~~  297 (326)
T 2x7f_A          262 KFQSFIESCLV---KNHSQRPATEQLMKHPFIRDQPNER  297 (326)
T ss_dssp             HHHHHHHHHCC---SSGGGSCCHHHHHTSHHHHCCTTHH
T ss_pred             HHHHHHHHHhc---cChhhCCCHHHHhhChHHhhCcccc
Confidence            99999999999   7779999999999999999766544


No 137
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=6.7e-43  Score=360.43  Aligned_cols=280  Identities=18%  Similarity=0.230  Sum_probs=197.2

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +-.++|.+.++||+|+||+||+|+...+++.||||++....     ...+...+|..+++.+..                
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~~----------------   92 (397)
T 1wak_A           34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-----HYTETALDEIRLLKSVRN----------------   92 (397)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHH----------------
T ss_pred             hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-----cchHHHHHHHHHHHHHhh----------------
Confidence            34578999999999999999999998899999999886421     001111122222222210                


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      .......|+||+++++.+.....    .....+|||||+ +++|.+++....                  ...+++..++
T Consensus        93 ~~~~~~~~~~iv~~~~~~~~~~~----~~~~~~lv~e~~-~~~l~~~~~~~~------------------~~~~~~~~~~  149 (397)
T 1wak_A           93 SDPNDPNREMVVQLLDDFKISGV----NGTHICMVFEVL-GHHLLKWIIKSN------------------YQGLPLPCVK  149 (397)
T ss_dssp             SCTTCGGGGGBCCEEEEEEEEET----TEEEEEEEECCC-CCBHHHHHHHTT------------------TSCCCHHHHH
T ss_pred             cCCCCCCcceeeeeecceeecCC----CCceEEEEEecc-CccHHHHHHhcc------------------cCCCCHHHHH
Confidence            00011238999999999874321    133699999999 677777776542                  1257899999


Q ss_pred             HHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCC---------------------------------------------
Q 039267          294 QILRQIITSLKKIHDT-GIVHRDVKPANLVLTKRG---------------------------------------------  327 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~-~IiHrDlKp~NILl~~~~---------------------------------------------  327 (502)
                      .++.||+.||+|||++ ||+||||||+|||++.++                                             
T Consensus       150 ~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (397)
T 1wak_A          150 KIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKN  229 (397)
T ss_dssp             HHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGG
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccccccc
Confidence            9999999999999998 999999999999999775                                             


Q ss_pred             ----cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHH
Q 039267          328 ----QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVL  403 (502)
Q Consensus       328 ----~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL  403 (502)
                          .+||+|||+++.....    .....||+.|+|||++.+..                      ++.++|||||||++
T Consensus       230 ~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----------------------~~~~~DiwslG~il  283 (397)
T 1wak_A          230 AEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSG----------------------YNTPADIWSTACMA  283 (397)
T ss_dssp             GGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSC----------------------CCTHHHHHHHHHHH
T ss_pred             ccccceEecccccccccccc----CccCCCCCcccCChhhcCCC----------------------CCcHHHHHHHHHHH
Confidence                8999999999876432    24557899999999998643                      44567999999999


Q ss_pred             HHHHhCCCCCCCcc--------hhhHHHHHhhccChHHHHHhhhc--------------------------cCccccccC
Q 039267          404 LQMAIPTLRSISGL--------KNFNMEIKTAQYDLNKWREYTRL--------------------------RSDFTILDL  449 (502)
Q Consensus       404 ~elltg~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~  449 (502)
                      |||++|..|+....        ..........+.....+......                          .........
T Consensus       284 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (397)
T 1wak_A          284 FELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQE  363 (397)
T ss_dssp             HHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHH
T ss_pred             HHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchh
Confidence            99999988875322        11222222222222111110000                          001112233


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      .+.++.+||.+||+   .||++|||++|+|+||||++
T Consensus       364 ~~~~~~~li~~~L~---~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          364 EAAGFTDFLLPMLE---LIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHHHHGGGGC---SSGGGSCCHHHHHTSGGGGC
T ss_pred             hHHHHHHHHHHHhc---cChhhcCCHHHHhhCccccC
Confidence            46778899999999   77799999999999999974


No 138
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=3.6e-42  Score=346.04  Aligned_cols=284  Identities=21%  Similarity=0.252  Sum_probs=205.6

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEe-cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIV-PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ..++|.+.+.||+|+||.||+|++. .+|+.||+|++........  .....                     ..+....
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~---------------------~~e~~~l   65 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPLST---------------------IREVAVL   65 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS--CBCTH---------------------HHHHHHH
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc--CCchh---------------------hHHHHHH
Confidence            3468999999999999999999985 6788899988875322100  00000                     0111112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++.....   ...+..++||||++ |+|.+++....                  ...+++..++
T Consensus        66 ~~l~~~~h~~i~~~~~~~~~~~~---~~~~~~~lv~e~~~-~~L~~~l~~~~------------------~~~~~~~~~~  123 (326)
T 1blx_A           66 RHLETFEHPNVVRLFDVCTVSRT---DRETKLTLVFEHVD-QDLTTYLDKVP------------------EPGVPTETIK  123 (326)
T ss_dssp             HHHHHTCCTTBCCEEEEEEEEEC---SSEEEEEEEEECCS-CBHHHHHHHSC------------------TTCSCHHHHH
T ss_pred             HhhhccCCCCeEeeeeeeeeccc---CCCceEEEEEecCC-CCHHHHHHhcc------------------cCCCCHHHHH
Confidence            23445589999999999863221   11346899999996 79999998753                  1247899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+..      
T Consensus       124 ~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~------  195 (326)
T 1blx_A          124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSS------  195 (326)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCC------
T ss_pred             HHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCC--CccccccccceeCHHHHhcCC------
Confidence            999999999999999999999999999999999999999999998765332  234567899999999997543      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHHhhcc-ChHHHHHhhhc----------
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIKTAQY-DLNKWREYTRL----------  440 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~----------  440 (502)
                                      ++.++|||||||++|||++|..|+.......  .......+. ....|......          
T Consensus       196 ----------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (326)
T 1blx_A          196 ----------------YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA  259 (326)
T ss_dssp             ----------------CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC
T ss_pred             ----------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCc
Confidence                            4457799999999999999998876544322  222222111 11122111000          


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      .+........+..+.+|+.+||+   .||++|||++++++||||++....
T Consensus       260 ~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          260 QPIEKFVTDIDELGKDLLLKCLT---FNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             CCGGGTCCSCCHHHHHHHHHHSC---SSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             chhhhccccCCHHHHHHHHHHcC---CCcccCCCHHHHhcCccccccchh
Confidence            01112345678999999999999   777999999999999999976543


No 139
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=3.2e-42  Score=345.72  Aligned_cols=266  Identities=17%  Similarity=0.163  Sum_probs=192.2

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .+++..++|++.+.||+|+||+||+|++  +|+.||+|++......                         ......+.+
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~-------------------------~~~~~~~~~   83 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFH-------------------------AERVNEFLR   83 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCS-------------------------HHHHHHHHH
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCC-------------------------HHHHHHHHH
Confidence            4568889999999999999999999975  6788888887653210                         011111111


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                       +...+..+.||||+++++++...        +..++||||+++|+|.+++...+                 ....+++.
T Consensus        84 -E~~~l~~l~hp~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-----------------~~~~~~~~  137 (309)
T 3p86_A           84 -EVAIMKRLRHPNIVLFMGAVTQP--------PNLSIVTEYLSRGSLYRLLHKSG-----------------AREQLDER  137 (309)
T ss_dssp             -HHHHHHHCCCTTBCCEEEEECST--------TCCEEEEECCTTCBHHHHHHSTT-----------------HHHHSCHH
T ss_pred             -HHHHHHhCCCCCEeeEEEEEEEC--------CceEEEEecCCCCcHHHHHhhcC-----------------CCCCCCHH
Confidence             22335666799999999998653        35999999999999999998653                 11247899


Q ss_pred             HHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTG--IVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~--IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      .++.++.||+.||+|||+++  |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+..+
T Consensus       138 ~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~  216 (309)
T 3p86_A          138 RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-LSSKSAAGTPEWMAPEVLRDEPS  216 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------------------CCTTSCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc-cccccCCCCccccChhhhcCCCC
Confidence            99999999999999999999  9999999999999999999999999998654332 22345679999999999976443


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                            +.++|||||||++|||++|..|+...........            ..........+.
T Consensus       217 ----------------------~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~------------~~~~~~~~~~~~  262 (309)
T 3p86_A          217 ----------------------NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA------------VGFKCKRLEIPR  262 (309)
T ss_dssp             ----------------------CTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH------------HHHSCCCCCCCT
T ss_pred             ----------------------CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------------HHhcCCCCCCCc
Confidence                                  4567999999999999999988754432211111            111122334556


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhc--CCccccC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALR--HPYFLLG  487 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~--HP~f~~~  487 (502)
                      .++.++.+|+.+||+   .||.+|||++++++  .++++..
T Consensus       263 ~~~~~l~~li~~~l~---~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          263 NLNPQVAAIIEGCWT---NEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             TSCHHHHHHHHHHTC---SSGGGSCCHHHHHHHHHHHHC--
T ss_pred             cCCHHHHHHHHHHcc---CChhhCcCHHHHHHHHHHHHHhC
Confidence            689999999999999   77799999999998  5666543


No 140
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.7e-42  Score=339.53  Aligned_cols=257  Identities=15%  Similarity=0.232  Sum_probs=197.7

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      +.|.+..++|++.+.||+|+||+||+|++. ++..||+|++.....                         ..+.   + 
T Consensus         3 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------------------~~~~---~-   52 (269)
T 4hcu_A            3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-------------------------SEED---F-   52 (269)
T ss_dssp             --CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-------------------------CHHH---H-
T ss_pred             ccEEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-------------------------CHHH---H-
Confidence            467788899999999999999999999975 566778877764221                         0011   1 


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      ..+...+..+.||||+++++++...        +..++||||+++|+|.+++....                   ..+++
T Consensus        53 ~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~  105 (269)
T 4hcu_A           53 IEEAEVMMKLSHPKLVQLYGVCLEQ--------APICLVFEFMEHGCLSDYLRTQR-------------------GLFAA  105 (269)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEECSS--------SSEEEEEECCTTCBHHHHHHTTT-------------------TCCCH
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEecC--------CceEEEEEeCCCCcHHHHHHhcC-------------------cccCH
Confidence            1122335666799999999998753        35999999999999999997653                   24788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++.+..  
T Consensus       106 ~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  183 (269)
T 4hcu_A          106 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--  183 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCC--
Confidence            999999999999999999999999999999999999999999999999876554433445566788999999987543  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++||||||+++|||++ |..|+..............             ......+.
T Consensus       184 --------------------~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~-------------~~~~~~~~  230 (269)
T 4hcu_A          184 --------------------YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-------------GFRLYKPR  230 (269)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-------------TCCCCCCT
T ss_pred             --------------------CCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhc-------------CccCCCCC
Confidence                                4456799999999999999 8877654432211111110             01122334


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..++++.+++.+||+   .||++|||++++++|
T Consensus       231 ~~~~~~~~li~~~l~---~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          231 LASTHVYQIMNHCWR---ERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             TSCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHcc---CCcccCcCHHHHHHH
Confidence            568999999999999   777999999999986


No 141
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.6e-42  Score=356.73  Aligned_cols=281  Identities=15%  Similarity=0.188  Sum_probs=196.2

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .+++..++|.+++.||+|+||.||+|++...++.                  .......+|+|.++... .......+..
T Consensus        75 ~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~------------------~~~~~~~vavK~~~~~~-~~~~~~~~~~  135 (370)
T 2psq_A           75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKD------------------KPKEAVTVAVKMLKDDA-TEKDLSDLVS  135 (370)
T ss_dssp             TTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTT------------------CTTCEEEEEEEECCTTC-BHHHHHHHHH
T ss_pred             cccccHHHCEeeeEEeeCCCeeEEEEEEecccCc------------------CcCcceeEEEEEecCCc-CHHHHHHHHH
Confidence            4567788999999999999999999997532110                  01112334444443221 1111112222


Q ss_pred             HHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          211 WFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       211 ~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      +. ..+..+ .||||++++++|..        .+..++||||+++|+|.+++...+........    .........+++
T Consensus       136 E~-~~l~~l~~hpnIv~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~----~~~~~~~~~~~~  202 (370)
T 2psq_A          136 EM-EMMKMIGKHKNIINLLGACTQ--------DGPLYVIVEYASKGNLREYLRARRPPGMEYSY----DINRVPEEQMTF  202 (370)
T ss_dssp             HH-HHHHHSCCCTTBCCEEEEECS--------SSSCEEEEECCTTCBHHHHHHHTCCC---------------CCCCCCH
T ss_pred             HH-HHHHHhcCCCCEeeEEEEEcc--------CCCEEEEEEcCCCCCHHHHHHhhCCccccccc----cccccccccCCH
Confidence            22 234455 79999999999865        34599999999999999999876421100000    000112235789


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      ..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+.. 
T Consensus       203 ~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-  281 (370)
T 2psq_A          203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV-  281 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCC-
Confidence            999999999999999999999999999999999999999999999999976544332 234456788999999997643 


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTIL  447 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                                           ++.++|||||||++|||++ |..|+.............             .......+
T Consensus       282 ---------------------~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~-------------~~~~~~~~  327 (370)
T 2psq_A          282 ---------------------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK-------------EGHRMDKP  327 (370)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-------------TTCCCCCC
T ss_pred             ---------------------CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-------------cCCCCCCC
Confidence                                 4467799999999999999 877765432211111100             11122344


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..++.++.+|+.+||+   .||.+|||++|++++
T Consensus       328 ~~~~~~l~~li~~~l~---~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          328 ANCTNELYMMMRDCWH---AVPSQRPTFKQLVED  358 (370)
T ss_dssp             TTSCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence            5678999999999999   777999999999874


No 142
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.8e-42  Score=344.57  Aligned_cols=270  Identities=22%  Similarity=0.255  Sum_probs=199.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|++.+.||+|+||.||+|++..+|+.||+|++......                           ....+..+ .
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---------------------------~~~~~~~e-~   67 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE---------------------------ELEDYIVE-I   67 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C---------------------------CHHHHHHH-H
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH---------------------------HHHHHHHH-H
Confidence            3456799999999999999999999888999999987642110                           00111111 1


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++...        +..++||||+++++|.+++....                   ..+++..++
T Consensus        68 ~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~l~~~~~~~~-------------------~~~~~~~~~  120 (302)
T 2j7t_A           68 EILATCDHPYIVKLLGAYYHD--------GKLWIMIEFCPGGAVDAIMLELD-------------------RGLTEPQIQ  120 (302)
T ss_dssp             HHHHHCCCTTBCCEEEEEECC---------CEEEEEECCTTEEHHHHHHHHT-------------------SCCCHHHHH
T ss_pred             HHHhcCCCCCEeeeeeeeeeC--------CeEEEEEEeCCCCcHHHHHHhhc-------------------cCCCHHHHH
Confidence            235566899999999998763        35999999999999999997643                   257899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+.+|+||||||+|||++.++.+||+|||++....... .......||+.|+|||++......    
T Consensus       121 ~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~----  195 (302)
T 2j7t_A          121 VVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSFIGTPYWMAPEVVMCETMK----  195 (302)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC-----CCGGGCCHHHHHHHHTT----
T ss_pred             HHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-cccccccCChhhcCCeeeccccCC----
Confidence            999999999999999999999999999999999999999999986432211 122345789999999998521110    


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                   ...++.++||||||+++|||++|..|+......... ....          ....+........+.+
T Consensus       196 -------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~  251 (302)
T 2j7t_A          196 -------------DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-LKIA----------KSDPPTLLTPSKWSVE  251 (302)
T ss_dssp             -------------STTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHH----------HSCCCCCSSGGGSCHH
T ss_pred             -------------CCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-HHHh----------ccCCcccCCccccCHH
Confidence                         123556889999999999999998887544322111 1100          0111122234456889


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      +.+|+.+||+   .||++|||++++++||||+.....
T Consensus       252 l~~li~~~l~---~dp~~Rps~~~ll~h~~~~~~~~~  285 (302)
T 2j7t_A          252 FRDFLKIALD---KNPETRPSAAQLLEHPFVSSITSN  285 (302)
T ss_dssp             HHHHHHHHSC---SCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred             HHHHHHHHcc---cChhhCCCHHHHhcChHHhhhccc
Confidence            9999999999   777999999999999999976654


No 143
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=2.5e-42  Score=337.82  Aligned_cols=256  Identities=15%  Similarity=0.183  Sum_probs=197.8

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .+++..++|++.+.||+|+||+||+|++. ++..||+|+++....                         ....   + .
T Consensus         2 ~~~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------------------~~~~---~-~   51 (268)
T 3sxs_A            2 HMELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-------------------------SEDE---F-F   51 (268)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-------------------------CHHH---H-H
T ss_pred             ceEechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-------------------------cHHH---H-H
Confidence            46788899999999999999999999764 566788887764221                         0011   1 1


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      .+...+..+.||||+++++++..        .+..++||||+++++|.+++...+                   ..+++.
T Consensus        52 ~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~  104 (268)
T 3sxs_A           52 QEAQTMMKLSHPKLVKFYGVCSK--------EYPIYIVTEYISNGCLLNYLRSHG-------------------KGLEPS  104 (268)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECS--------SSSEEEEEECCTTCBHHHHHHHHG-------------------GGCCHH
T ss_pred             HHHHHHHhCCCCCEeeEEEEEcc--------CCceEEEEEccCCCcHHHHHHHcC-------------------CCCCHH
Confidence            11223556679999999999865        335999999999999999998753                   247899


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.++.|++.||+|||+.+|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++.+..   
T Consensus       105 ~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---  181 (268)
T 3sxs_A          105 QLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK---  181 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSE---
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccC---
Confidence            99999999999999999999999999999999999999999999999977655444445566788899999987543   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                         ++.++||||||+++|||++ |..|+..............             ......+..
T Consensus       182 -------------------~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-------------~~~~~~~~~  229 (268)
T 3sxs_A          182 -------------------YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ-------------GHRLYRPHL  229 (268)
T ss_dssp             -------------------EETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-------------TCCCCCCTT
T ss_pred             -------------------CchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHc-------------CCCCCCCCc
Confidence                               3356799999999999999 8888654433222111111             111223344


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .++++.+++.+||+   .||.+|||++++++|
T Consensus       230 ~~~~l~~li~~~l~---~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          230 ASDTIYQIMYSCWH---ELPEKRPTFQQLLSS  258 (268)
T ss_dssp             SCHHHHHHHHHTTC---SSGGGSCCHHHHHHH
T ss_pred             ChHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence            68899999999999   777999999999986


No 144
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.5e-42  Score=344.14  Aligned_cols=263  Identities=22%  Similarity=0.296  Sum_probs=204.2

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      -..+.|.+.+.||+|+||.||+|+...+++.||+|++......                          .....+.+ ..
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------------------------~~~~~~~~-e~   71 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--------------------------DEIEDIQQ-EI   71 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--------------------------TTHHHHHH-HH
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--------------------------HHHHHHHH-HH
Confidence            3456799999999999999999999889999999988753210                          00111111 12


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.|+||+++++++...        +..++||||+++++|.+++...                     .+++..+.
T Consensus        72 ~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~---------------------~~~~~~~~  122 (303)
T 3a7i_A           72 TVLSQCDSPYVTKYYGSYLKD--------TKLWIIMEYLGGGSALDLLEPG---------------------PLDETQIA  122 (303)
T ss_dssp             HHHHHCCCTTBCCEEEEEEET--------TEEEEEEECCTTEEHHHHHTTS---------------------CCCHHHHH
T ss_pred             HHHHhCCCCCEeEEEEEEecC--------CeEEEEEEeCCCCcHHHHHhcC---------------------CCCHHHHH
Confidence            235667899999999998763        3599999999999999999753                     47889999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..      
T Consensus       123 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~------  195 (303)
T 3a7i_A          123 TILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSA------  195 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-CBCCCCSCGGGCCHHHHTTCC------
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc-ccCccCCCcCccCHHHHhcCC------
Confidence            9999999999999999999999999999999999999999999987654322 234567899999999997543      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                      ++.++||||||+++|||++|..|+.............             ...........+..
T Consensus       196 ----------------~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~  246 (303)
T 3a7i_A          196 ----------------YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-------------KNNPPTLEGNYSKP  246 (303)
T ss_dssp             ----------------BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-------------HSCCCCCCSSCCHH
T ss_pred             ----------------CCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh-------------cCCCCCCccccCHH
Confidence                            3456799999999999999998875443221111100             00111234467899


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      +.+|+.+||+   .||++|||++++++||||.......
T Consensus       247 l~~li~~~l~---~dp~~Rps~~~ll~~~~~~~~~~~~  281 (303)
T 3a7i_A          247 LKEFVEACLN---KEPSFRPTAKELLKHKFILRNAKKT  281 (303)
T ss_dssp             HHHHHHHHCC---SSGGGSCCHHHHTTCHHHHHHCCCG
T ss_pred             HHHHHHHHcC---CChhhCcCHHHHhhChhhhcCCCcc
Confidence            9999999999   7779999999999999998655443


No 145
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.8e-42  Score=343.26  Aligned_cols=266  Identities=21%  Similarity=0.203  Sum_probs=195.0

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||.||+|++..+++.||+|.+.......                         .........+.
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~e~   62 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK-------------------------EETLKRFEREV   62 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC-------------------------HHHHHHHHHHH
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc-------------------------HHHHHHHHHHH
Confidence            34568999999999999999999998899999999886532210                         00111112222


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+++|+|.+++...+                    .+++..++
T Consensus        63 ~~l~~l~hp~iv~~~~~~~~--------~~~~~lv~e~~~g~~L~~~l~~~~--------------------~~~~~~~~  114 (294)
T 4eqm_A           63 HNSSQLSHQNIVSMIDVDEE--------DDCYYLVMEYIEGPTLSEYIESHG--------------------PLSVDTAI  114 (294)
T ss_dssp             HHHTTCCBTTBCCEEEEEEC--------SSEEEEEEECCCSCBHHHHHHHHC--------------------SCCHHHHH
T ss_pred             HHHhcCCCCCCceEEEeeee--------CCeEEEEEeCCCCCCHHHHHHhcC--------------------CCCHHHHH
Confidence            34667789999999998865        346999999999999999998764                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..............||+.|+|||++.+..+     
T Consensus       115 ~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-----  189 (294)
T 4eqm_A          115 NFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT-----  189 (294)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCC-----
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCC-----
Confidence            999999999999999999999999999999999999999999998776544334455679999999999976443     


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                       +.++||||||+++|||++|..|+......... ........+...        .......++.
T Consensus       190 -----------------~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~  243 (294)
T 4eqm_A          190 -----------------DECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-IKHIQDSVPNVT--------TDVRKDIPQS  243 (294)
T ss_dssp             -----------------CTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-HHHHSSCCCCHH--------HHSCTTSCHH
T ss_pred             -----------------CchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhhccCCCcc--------hhcccCCCHH
Confidence                             35679999999999999999987654432221 111111111100        1123457899


Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      +.+++.+||+   .||.+||+..+.+.+.|...
T Consensus       244 l~~li~~~l~---~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          244 LSNVILRATE---KDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             HHHHHHHHSC---SSGGGSCSSHHHHHHHHHTS
T ss_pred             HHHHHHHHhc---CCHhHccccHHHHHHHHHHH
Confidence            9999999999   77799996666666666553


No 146
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=6.5e-43  Score=356.48  Aligned_cols=278  Identities=17%  Similarity=0.179  Sum_probs=197.3

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEe-----cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIV-----PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF  205 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~  205 (502)
                      .|++..++|.+.+.||+|+||.||+|++.     .+++.||||+++....                          ....
T Consensus        16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~   69 (359)
T 3vhe_A           16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--------------------------HSEH   69 (359)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--------------------------HHHH
T ss_pred             cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC--------------------------HHHH
Confidence            56788999999999999999999999954     3445666666643211                          0111


Q ss_pred             hhhHHHHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcc--------------
Q 039267          206 GDYEEWFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNL--------------  270 (502)
Q Consensus       206 ~~~~~~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~--------------  270 (502)
                      ..+..+... +..+ +||||+++++++....       +..++||||+++|+|.+++.........              
T Consensus        70 ~~~~~E~~~-l~~l~~hpniv~~~~~~~~~~-------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  141 (359)
T 3vhe_A           70 RALMSELKI-LIHIGHHLNVVNLLGACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY  141 (359)
T ss_dssp             HHHHHHHHH-HHHHCCCTTBCCEEEEECSTT-------SCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------
T ss_pred             HHHHHHHHH-HHhhcCCcceeeeeeeeecCC-------CceEEEEEecCCCcHHHHHHhccccccccccccchhhccccc
Confidence            112222222 3334 7999999999987642       3589999999999999999876421000              


Q ss_pred             --------------------------------hhhhccccccCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCC
Q 039267          271 --------------------------------ETYMFGRVLEGEDSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKP  318 (502)
Q Consensus       271 --------------------------------~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp  318 (502)
                                                      ................+++..++.++.||+.||+|||+++|+||||||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp  221 (359)
T 3vhe_A          142 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  221 (359)
T ss_dssp             ------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             ccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCCh
Confidence                                            000000000001122389999999999999999999999999999999


Q ss_pred             CcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHH
Q 039267          319 ANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMY  397 (502)
Q Consensus       319 ~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVw  397 (502)
                      +|||++.++.+||+|||+++........ ......||+.|+|||++.+..                      ++.++|||
T Consensus       222 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~----------------------~~~~~Di~  279 (359)
T 3vhe_A          222 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV----------------------YTIQSDVW  279 (359)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCC----------------------CCHHHHHH
T ss_pred             hhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCC----------------------CCchhhhh
Confidence            9999999999999999999876544322 344567899999999987533                      44677999


Q ss_pred             HHHHHHHHHHh-CCCCCCCcchhh--HHHHHhhccChHHHHHhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcC
Q 039267          398 SAGIVLLQMAI-PTLRSISGLKNF--NMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLS  474 (502)
Q Consensus       398 SlGvvL~ellt-g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps  474 (502)
                      ||||++|||++ |..|+.......  ......              ......+...++++.+++.+||+   .||.+|||
T Consensus       280 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~l~---~dP~~Rps  342 (359)
T 3vhe_A          280 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE--------------GTRMRAPDYTTPEMYQTMLDCWH---GEPSQRPT  342 (359)
T ss_dssp             HHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH--------------TCCCCCCTTCCHHHHHHHHHHTC---SSGGGSCC
T ss_pred             hHHHHHHHHHhcCCCCCCccchhHHHHHHHHc--------------CCCCCCCCCCCHHHHHHHHHHcc---CChhhCCC
Confidence            99999999998 888875443221  111111              11223445578999999999999   77799999


Q ss_pred             HHHHhcC
Q 039267          475 AAAALRH  481 (502)
Q Consensus       475 ~~evl~H  481 (502)
                      ++|+++|
T Consensus       343 ~~ell~~  349 (359)
T 3vhe_A          343 FSELVEH  349 (359)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999987


No 147
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=2e-42  Score=342.81  Aligned_cols=264  Identities=19%  Similarity=0.192  Sum_probs=196.3

Q ss_pred             CEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHhh
Q 039267          138 DFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRLS  217 (502)
Q Consensus       138 ~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l~  217 (502)
                      +|.....||+|+||.||+|++..+++.||+|.+......                           ....+ ......+.
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~-~~e~~~l~   74 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR---------------------------YSQPL-HEEIALHK   74 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------------------------------HHH-HHHHHHHH
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchH---------------------------HHHHH-HHHHHHHH
Confidence            344455999999999999999889999999987652110                           00011 11123355


Q ss_pred             hcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHH
Q 039267          218 RAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILR  297 (502)
Q Consensus       218 ~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  297 (502)
                      .+.|+||+++++++..        .+..++||||+++++|.+++.....                 ...+++..++.++.
T Consensus        75 ~l~h~~iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~~~~~~  129 (295)
T 2clq_A           75 HLKHKNIVQYLGSFSE--------NGFIKIFMEQVPGGSLSALLRSKWG-----------------PLKDNEQTIGFYTK  129 (295)
T ss_dssp             TCCCTTBCCEEEEEEE--------TTEEEEEEECCSEEEHHHHHHHTTC-----------------CCTTCHHHHHHHHH
T ss_pred             hCCCCCEeeEeeEEEe--------CCcEEEEEEeCCCCCHHHHHHhhcc-----------------CCCccHHHHHHHHH
Confidence            6679999999999865        3469999999999999999987531                 12457888999999


Q ss_pred             HHHHHHHHHHHcCCeeccCCCCcEEEcc-CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          298 QIITSLKKIHDTGIVHRDVKPANLVLTK-RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       298 qia~gL~yLH~~~IiHrDlKp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      |++.||+|||+++|+||||||+|||++. ++.+||+|||+++....... ......||+.|+|||++.+..         
T Consensus       130 qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~---------  199 (295)
T 2clq_A          130 QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGP---------  199 (295)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHHGG---------
T ss_pred             HHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-cccccCCCccccChhhhcCCC---------
Confidence            9999999999999999999999999987 89999999999987653322 234557899999999986421         


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHHH
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGWD  456 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  456 (502)
                                 ..++.++||||||+++|||++|..|+..............         .  .......+...+.++.+
T Consensus       200 -----------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~~~~  257 (295)
T 2clq_A          200 -----------RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG---------M--FKVHPEIPESMSAEAKA  257 (295)
T ss_dssp             -----------GGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHH---------H--HCCCCCCCTTSCHHHHH
T ss_pred             -----------CCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhc---------c--ccccccccccCCHHHHH
Confidence                       1245678999999999999999988754332222111110         0  11112334567899999


Q ss_pred             HHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          457 LATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       457 Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      |+.+||+   .||++|||++++++||||+....
T Consensus       258 li~~~l~---~dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          258 FILKCFE---PDPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             HHHHTTC---SSTTTSCCHHHHHTSGGGCC---
T ss_pred             HHHHHcc---CChhhCCCHHHHhcChhhhhccc
Confidence            9999999   77799999999999999986543


No 148
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=4.6e-43  Score=353.47  Aligned_cols=272  Identities=20%  Similarity=0.243  Sum_probs=196.2

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      +.+..++|++.+.||+|+||+||+|++  .++.||||++.....                           .  ....+.
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---------------------------~--~~~~~~   67 (322)
T 3soc_A           19 LYFQSMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQDK---------------------------Q--SWQNEY   67 (322)
T ss_dssp             EEETTEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGGGH---------------------------H--HHHHHH
T ss_pred             cccchhhchhhheecccCceEEEEEEE--CCCEEEEEEeecCch---------------------------H--HHHHHH
Confidence            447778999999999999999999986  477888887754210                           0  001111


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      +...+..+.||||+++++++......    ....++||||+++|+|.+++...                     .+++..
T Consensus        68 E~~~l~~l~hpniv~~~~~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~---------------------~~~~~~  122 (322)
T 3soc_A           68 EVYSLPGMKHENILQFIGAEKRGTSV----DVDLWLITAFHEKGSLSDFLKAN---------------------VVSWNE  122 (322)
T ss_dssp             HHHTSTTCCCTTBCCEEEEEEEECSS----SEEEEEEEECCTTCBHHHHHHHC---------------------CBCHHH
T ss_pred             HHHHHhcCCCCCchhhcceeccCCCC----CceEEEEEecCCCCCHHHHHHhc---------------------CCCHHH
Confidence            22346667899999999998764321    23479999999999999999865                     478999


Q ss_pred             HHHHHHHHHHHHHHHHHc----------CCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCc
Q 039267          292 IKQILRQIITSLKKIHDT----------GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPP  360 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~----------~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aP  360 (502)
                      ++.++.|++.||+|||+.          +|+||||||+|||++.++.+||+|||+++........ ......||+.|+||
T Consensus       123 ~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aP  202 (322)
T 3soc_A          123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP  202 (322)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCH
Confidence            999999999999999999          9999999999999999999999999999876554332 23446799999999


Q ss_pred             ccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh----hHHHHHhhccChHHHHH
Q 039267          361 ELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN----FNMEIKTAQYDLNKWRE  436 (502)
Q Consensus       361 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~  436 (502)
                      |++.+.....                 ..++.++|||||||++|||++|..|+......    +.... ........+..
T Consensus       203 E~~~~~~~~~-----------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~  264 (322)
T 3soc_A          203 EVLEGAINFQ-----------------RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI-GQHPSLEDMQE  264 (322)
T ss_dssp             HHHTTCCCCC-----------------HHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH-CSSCCHHHHHH
T ss_pred             hhcccccccC-----------------cCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh-ccCCchhhhhh
Confidence            9997633221                 12345789999999999999998887543321    11111 11112222222


Q ss_pred             hhhc---cCccc---cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          437 YTRL---RSDFT---ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       437 ~~~~---~~~~~---~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ....   ++...   .....++++.+|+.+||+   .||++|||++++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~---~dP~~Rps~~ell~  311 (322)
T 3soc_A          265 VVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD---HDAEARLSAGCVGE  311 (322)
T ss_dssp             HHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             hhhcccCCCCccccccccchHHHHHHHHHHHcc---CChhhCcCHHHHHH
Confidence            1111   11110   011234568999999999   77799999999986


No 149
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=5.8e-42  Score=348.66  Aligned_cols=279  Identities=20%  Similarity=0.229  Sum_probs=201.0

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++..+|+.||||++.....                          ......+. .....
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------------------------~~~~~~~~-~E~~~   62 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--------------------------PLFALRTL-REIKI   62 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS--------------------------HHHHHHHH-HHHHH
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc--------------------------chHHHHHH-HHHHH
Confidence            4689999999999999999999988899999988754211                          00000111 11223


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|+||+++++++.....   ...+..++||||++ |+|.+++...                     .+++..++.+
T Consensus        63 l~~l~h~~iv~~~~~~~~~~~---~~~~~~~lv~e~~~-~~L~~~~~~~---------------------~~~~~~~~~~  117 (353)
T 2b9h_A           63 LKHFKHENIITIFNIQRPDSF---ENFNEVYIIQELMQ-TDLHRVISTQ---------------------MLSDDHIQYF  117 (353)
T ss_dssp             HHHCCCTTBCCEEEECCCSCS---TTCCCEEEEECCCS-EEHHHHHHHC---------------------CCCHHHHHHH
T ss_pred             HHhCcCCCcCCeeeeeccccc---CccceEEEEEeccC-ccHHHHHhhc---------------------CCCHHHHHHH
Confidence            556679999999998765421   12346999999995 7999999864                     4788999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---------CCCcccCCCCcCCcccccCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---------VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +.|++.||+|||++||+||||||+|||++.++.+||+|||+++........         ......||+.|+|||++...
T Consensus       118 ~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  197 (353)
T 2b9h_A          118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS  197 (353)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSC
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccC
Confidence            999999999999999999999999999999999999999999876533211         12234689999999987642


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhccCh----------HHH
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQYDL----------NKW  434 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~~~----------~~~  434 (502)
                                           ..++.++|||||||++|||++|..|+......  ........+...          ...
T Consensus       198 ---------------------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (353)
T 2b9h_A          198 ---------------------AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA  256 (353)
T ss_dssp             ---------------------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHH
T ss_pred             ---------------------CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchh
Confidence                                 23456789999999999999998887654322  122222111110          011


Q ss_pred             HHhhhccC------ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          435 REYTRLRS------DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       435 ~~~~~~~~------~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      .......+      ....++..+.++.+|+.+||+   .||++|||++|+++||||+.....
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLV---FDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             HHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC---SSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             hHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcC---cCcccCCCHHHHhcCccccccCCc
Confidence            11111000      011234678999999999999   777999999999999999965543


No 150
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.4e-42  Score=344.75  Aligned_cols=270  Identities=18%  Similarity=0.189  Sum_probs=195.8

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEE----ecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAI----VPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~----~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      ++..++|++.+.||+|+||+||+|++    ..+++.||||++....                           ......+
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------------------------~~~~~~~   58 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------------------EEHLRDF   58 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---------------------------HHHHHHH
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---------------------------HHHHHHH
Confidence            46678899999999999999999984    3466677776655311                           0111111


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      . .+...+..+.||||+++++++....      ....++||||+++|+|.+++...+                   ..++
T Consensus        59 ~-~E~~~l~~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~  112 (295)
T 3ugc_A           59 E-REIEILKSLQHDNIVKYKGVCYSAG------RRNLKLIMEYLPYGSLRDYLQKHK-------------------ERID  112 (295)
T ss_dssp             H-HHHHHHHTCCCTTBCCEEEEECHHH------HTSCEEEEECCTTCBHHHHHHHCG-------------------GGCC
T ss_pred             H-HHHHHHHhCCCCCEeeEEEEEecCC------CCceEEEEEeCCCCCHHHHHHhcc-------------------cccC
Confidence            1 1223466678999999999886532      235899999999999999998753                   2478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++........  ......+|..|+|||++.+.
T Consensus       113 ~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (295)
T 3ugc_A          113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES  192 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCC
Confidence            9999999999999999999999999999999999999999999999999876544322  22344567789999998754


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChH---HHHHhhhccCc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLN---KWREYTRLRSD  443 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  443 (502)
                      .                      ++.++||||||+++|||++|..|+......+............   ...........
T Consensus       193 ~----------------------~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (295)
T 3ugc_A          193 K----------------------FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR  250 (295)
T ss_dssp             C----------------------CCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred             C----------------------CChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCc
Confidence            3                      4457799999999999999988876554444333222221111   11111222334


Q ss_pred             cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          444 FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       444 ~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      .+.+..+++++.+|+.+||+   .||++|||++|+++
T Consensus       251 ~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~el~~  284 (295)
T 3ugc_A          251 LPRPDGCPDEIYMIMTECWN---NNVNQRPSFRDLAL  284 (295)
T ss_dssp             CCCCTTCCHHHHHHHHHHSC---SSGGGSCCHHHHHH
T ss_pred             CCCCcCcCHHHHHHHHHHcC---CChhhCCCHHHHHH
Confidence            44566789999999999999   77799999999985


No 151
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=5.3e-42  Score=350.61  Aligned_cols=290  Identities=22%  Similarity=0.259  Sum_probs=198.5

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||.||+|+.. +|+.||||++........          ..  ..+.     ..........+.
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~----------~~--~~~~-----~~~~~~~~~~E~   80 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGR----------TV--NILS-----DSFLCKRVLREI   80 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTS----------CE--EGGG-----SHHHHHHHHHHH
T ss_pred             HhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccc----------hh--hhhh-----hhhHHHHHHHHH
Confidence            44578999999999999999999874 588999998876433211          00  0000     001111112222


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++......   .....++||||++ |+|.+++...+                   ..+++..++
T Consensus        81 ~~l~~l~h~~iv~~~~~~~~~~~~---~~~~~~lv~e~~~-~~l~~~~~~~~-------------------~~~~~~~~~  137 (362)
T 3pg1_A           81 RLLNHFHHPNILGLRDIFVHFEEP---AMHKLYLVTELMR-TDLAQVIHDQR-------------------IVISPQHIQ  137 (362)
T ss_dssp             HHHHHCCCTTBCCCSEEEEECCTT---TCCEEEEEEECCS-EEHHHHHHCTT-------------------SCCCHHHHH
T ss_pred             HHHHhCCCcCccceeeeEEeccCC---CcceEEEEEccCC-CCHHHHHHhcc-------------------cCCCHHHHH
Confidence            346677899999999998653321   1335899999996 79999988653                   257899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+.       
T Consensus       138 ~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~-------  208 (362)
T 3pg1_A          138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQF-------  208 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTC-------
T ss_pred             HHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCC-------
Confidence            999999999999999999999999999999999999999999998654332  23456789999999998752       


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHH-H--------HHhhh-cc
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNK-W--------REYTR-LR  441 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~-~--------~~~~~-~~  441 (502)
                                    ..++.++|||||||++|||++|..|+.....  .........+..... +        ..... ..
T Consensus       209 --------------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (362)
T 3pg1_A          209 --------------KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSL  274 (362)
T ss_dssp             --------------TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCC
T ss_pred             --------------CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhc
Confidence                          2345678999999999999999888765432  222222222221111 1        01000 00


Q ss_pred             ------CccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          442 ------SDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       442 ------~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                            ......+..++.+.+|+.+||+   .||.+|||++|+++||||+...+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~f~~~~~~  326 (362)
T 3pg1_A          275 SNVPARAWTAVVPTADPVALDLIAKMLE---FNPQRRISTEQALRHPYFESLFDP  326 (362)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHTC---SSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred             ccCChhhHHhhCCCCCHHHHHHHHHHhc---CChhhCCCHHHHHcCchhhhccCc
Confidence                  0011234568889999999999   777999999999999999976544


No 152
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=1e-42  Score=346.82  Aligned_cols=269  Identities=20%  Similarity=0.232  Sum_probs=199.5

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||.||+|....+++.||+|+++.......                       ......+. .+...+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----------------------~~~~~~~~-~E~~~l   60 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRI-----------------------PNGEANVK-KEIQLL   60 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHS-----------------------TTHHHHHH-HHHHHH
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccccc-----------------------chhHHHHH-HHHHHH
Confidence            579999999999999999999988899999998875311000                       00001111 112335


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.|+||+++++++....      .+..++||||++++ |.+++....                  ...+++..+..++
T Consensus        61 ~~l~h~~i~~~~~~~~~~~------~~~~~lv~e~~~~~-l~~~~~~~~------------------~~~~~~~~~~~~~  115 (305)
T 2wtk_C           61 RRLRHKNVIQLVDVLYNEE------KQKMYMVMEYCVCG-MQEMLDSVP------------------EKRFPVCQAHGYF  115 (305)
T ss_dssp             TTCCCTTBCCEEEEEECC---------CEEEEEECCSEE-HHHHHHHST------------------TCSCCHHHHHHHH
T ss_pred             HhcCCCCeeEEEEEEEcCC------CCeEEEEehhccCC-HHHHHHhCc------------------ccccCHHHHHHHH
Confidence            6677999999999885432      34689999999755 888887642                  1357899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCC-ccCCCcccCCCCcCCcccccCCCCCCCCCCc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGK-NYVPNRTLLDPDYCPPELYVLPEETPSPPPE  375 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  375 (502)
                      .||+.||+|||+++|+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+...       
T Consensus       116 ~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-------  188 (305)
T 2wtk_C          116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDT-------  188 (305)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSC-------
T ss_pred             HHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCccc-------
Confidence            999999999999999999999999999999999999999998764322 112245568999999999875321       


Q ss_pred             chhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          376 PIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       376 ~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                   .++.++||||||+++|||++|..|+........  ..          ....  ........+++++.
T Consensus       189 -------------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~----------~i~~--~~~~~~~~~~~~l~  241 (305)
T 2wtk_C          189 -------------FSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL--FE----------NIGK--GSYAIPGDCGPPLS  241 (305)
T ss_dssp             -------------EESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HH----------HHHH--CCCCCCSSSCHHHH
T ss_pred             -------------CCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HH----------HHhc--CCCCCCCccCHHHH
Confidence                         123578999999999999999988764332111  11          0101  12234456789999


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      +|+.+||+   .||.+|||++++++||||+.....+
T Consensus       242 ~li~~~l~---~dp~~Rps~~~ll~~~~~~~~~~~~  274 (305)
T 2wtk_C          242 DLLKGMLE---YEPAKRFSIRQIRQHSWFRKKHPPA  274 (305)
T ss_dssp             HHHHHHTC---SSTTTSCCHHHHHHSHHHHSCCCC-
T ss_pred             HHHHHHcc---CChhhCCCHHHHhcCcccccCCCCc
Confidence            99999999   7779999999999999998765543


No 153
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.5e-42  Score=347.15  Aligned_cols=257  Identities=16%  Similarity=0.152  Sum_probs=193.8

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+++.||+|+||+||+|++..+++.||+|.+.....                           .....+. .+
T Consensus         6 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~---------------------------~~~~~~~-~E   57 (310)
T 3s95_A            6 IFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE---------------------------ETQRTFL-KE   57 (310)
T ss_dssp             EECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCH---------------------------HHHHHHH-HH
T ss_pred             eeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCH---------------------------HHHHHHH-HH
Confidence            3667889999999999999999999988899999887643110                           0001111 12


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++...        +..++||||+++|+|.+++....                   ..+++..+
T Consensus        58 ~~~l~~l~hp~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~~~  110 (310)
T 3s95_A           58 VKVMRCLEHPNVLKFIGVLYKD--------KRLNFITEYIKGGTLRGIIKSMD-------------------SQYPWSQR  110 (310)
T ss_dssp             HHHHTTCCCTTBCCEEEEEEET--------TEEEEEEECCTTCBHHHHHHHCC-------------------TTSCHHHH
T ss_pred             HHHHHhCCCcCcccEEEEEecC--------CeeEEEEEecCCCcHHHHHHhcc-------------------CCCCHHHH
Confidence            2335666799999999998763        45999999999999999998743                   25789999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccC-------------CCcccCCCCcCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYV-------------PNRTLLDPDYCP  359 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-------------~~~~~gt~~y~a  359 (502)
                      ..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.........             .....||+.|+|
T Consensus       111 ~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  190 (310)
T 3s95_A          111 VSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA  190 (310)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCC
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeC
Confidence            9999999999999999999999999999999999999999999998765432211             114579999999


Q ss_pred             cccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhh
Q 039267          360 PELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTR  439 (502)
Q Consensus       360 PE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (502)
                      ||++.+..                      ++.++||||||+++|||++|..|+.........    ..........   
T Consensus       191 PE~~~~~~----------------------~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~----~~~~~~~~~~---  241 (310)
T 3s95_A          191 PEMINGRS----------------------YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD----FGLNVRGFLD---  241 (310)
T ss_dssp             HHHHTTCC----------------------CCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT----SSBCHHHHHH---
T ss_pred             HHHhcCCC----------------------CCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH----Hhhhhhcccc---
Confidence            99997643                      445779999999999999987775443221110    0001111100   


Q ss_pred             ccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          440 LRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       440 ~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                          ...+..+++++.+|+.+||+   .||++|||++++++
T Consensus       242 ----~~~~~~~~~~l~~li~~~l~---~dP~~Rps~~~l~~  275 (310)
T 3s95_A          242 ----RYCPPNCPPSFFPITVRCCD---LDPEKRPSFVKLEH  275 (310)
T ss_dssp             ----HTCCTTCCTTHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             ----ccCCCCCCHHHHHHHHHHcc---CChhhCcCHHHHHH
Confidence                01234578899999999999   77799999999987


No 154
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=4.9e-42  Score=345.79  Aligned_cols=276  Identities=21%  Similarity=0.267  Sum_probs=196.1

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEE-ecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAI-VPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~-~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .-.++|++.+.||+|+||+||+|.+ ..+++.||+|+++...     ...+....|..+++.++                
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~----------------   69 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-----RYCEAARSEIQVLEHLN----------------   69 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-----HHHHHHHHHHHHHHHHH----------------
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-----chhHHHHHHHHHHHHhh----------------
Confidence            4456899999999999999999988 4577888888876411     00011111222222211                


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                        ......|++++++++++..        .+..++||||+ +++|.+++...+                  ...+++..+
T Consensus        70 --~~~~~~~~~i~~~~~~~~~--------~~~~~lv~e~~-~~~l~~~l~~~~------------------~~~~~~~~~  120 (339)
T 1z57_A           70 --TTDPNSTFRCVQMLEWFEH--------HGHICIVFELL-GLSTYDFIKENG------------------FLPFRLDHI  120 (339)
T ss_dssp             --HHCTTCTTCBCCEEEEEEE--------TTEEEEEEECC-CCBHHHHHHHTT------------------TCCCCHHHH
T ss_pred             --hcCCCCceeeEeeeccccc--------CCcEEEEEcCC-CCCHHHHHHhcC------------------CCCCcHHHH
Confidence              0112345569999998865        34699999999 899999998763                  125788999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-------------------CCcEEEeeccccccccCCCccCCCcccC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTK-------------------RGQIKLIDFGAATDLRIGKNYVPNRTLL  353 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~-------------------~~~~kL~DFGla~~~~~~~~~~~~~~~g  353 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.                   ++.+||+|||+++.....    .....|
T Consensus       121 ~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~g  196 (339)
T 1z57_A          121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVS  196 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC----CCSSCS
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc----cccccC
Confidence            999999999999999999999999999999987                   678999999999874432    235578


Q ss_pred             CCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHHhhccCh
Q 039267          354 DPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIKTAQYDL  431 (502)
Q Consensus       354 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~~~~~~~  431 (502)
                      |+.|+|||++.+..                      ++.++|||||||++|||++|..|+.......  .......+...
T Consensus       197 t~~y~aPE~~~~~~----------------------~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  254 (339)
T 1z57_A          197 TRHYRAPEVILALG----------------------WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLP  254 (339)
T ss_dssp             CGGGCCHHHHTTSC----------------------CCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCC
T ss_pred             CccccChHHhhCCC----------------------CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            99999999997543                      4467799999999999999988875443322  22222222111


Q ss_pred             HHHHHhhh------------------------c----cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCc
Q 039267          432 NKWREYTR------------------------L----RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPY  483 (502)
Q Consensus       432 ~~~~~~~~------------------------~----~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~  483 (502)
                      ..+.....                        .    .......+..++++.+|+.+||+   .||.+|||++|+++|||
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~---~dP~~Rpt~~ell~hp~  331 (339)
T 1z57_A          255 KHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE---YDPAKRITLREALKHPF  331 (339)
T ss_dssp             HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC---SSTTTSCCHHHHTTSGG
T ss_pred             HHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC---cCcccccCHHHHhcCHH
Confidence            11111000                        0    00011122346788999999999   77799999999999999


Q ss_pred             cccCC
Q 039267          484 FLLGG  488 (502)
Q Consensus       484 f~~~~  488 (502)
                      |+...
T Consensus       332 f~~~~  336 (339)
T 1z57_A          332 FDLLK  336 (339)
T ss_dssp             GGGGG
T ss_pred             HHHHh
Confidence            98654


No 155
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=3.7e-42  Score=340.48  Aligned_cols=260  Identities=21%  Similarity=0.261  Sum_probs=199.5

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|++.+.||+|+||.||+|+...+++.||+|++.......                         .....+.. ....+
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~-------------------------~~~~~~~~-e~~~l   75 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-------------------------KDTSTILR-EVELL   75 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS-------------------------SCHHHHHH-HHHHH
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch-------------------------HHHHHHHH-HHHHH
Confidence            57999999999999999999998889999999887532210                         00111111 11235


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++..        .+..++||||+++++|.+++...+                    .+++..++.++
T Consensus        76 ~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~i~  127 (287)
T 2wei_A           76 KKLDHPNIMKLFEILED--------SSSFYIVGELYTGGELFDEIIKRK--------------------RFSEHDAARII  127 (287)
T ss_dssp             HTCCCTTBCCEEEEEEC--------SSEEEEEECCCCSCBHHHHHHHHS--------------------SCCHHHHHHHH
T ss_pred             HhccCCCccEEEEEEeC--------CCeEEEEEEccCCCCHHHHHHhcC--------------------CCCHHHHHHHH
Confidence            56689999999998865        345999999999999999998653                    57899999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccC---CcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKR---GQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .||+.||+|||+++|+||||||+||+++.+   +.+||+|||+++......  ......+|+.|+|||.+.+        
T Consensus       128 ~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~--------  197 (287)
T 2wei_A          128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLRG--------  197 (287)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS--SCSCHHHHHTTCCHHHHTT--------
T ss_pred             HHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC--ccccccCcccccChHHhcC--------
Confidence            999999999999999999999999999754   479999999998765432  2234568999999998864        


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                     .++.++||||||+++|+|++|..|+........ ..+....           .....+.+...+.
T Consensus       198 ---------------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~  251 (287)
T 2wei_A          198 ---------------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK-----------YAFDLPQWRTISD  251 (287)
T ss_dssp             ---------------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------CCCCSGGGTTSCH
T ss_pred             ---------------CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------CCCCchhhhhcCH
Confidence                           244678999999999999999988765432211 1111111           1112233356789


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      ++.+|+.+||+   .||++|||++++++||||+...+
T Consensus       252 ~~~~li~~~l~---~dp~~Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          252 DAKDLIRKMLT---FHPSLRITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             HHHHHHHHHTC---SSGGGSCCHHHHHHSHHHHHHCC
T ss_pred             HHHHHHHHHcc---cChhhCcCHHHHhcCHHHhcccc
Confidence            99999999999   77799999999999999986543


No 156
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=2.2e-42  Score=369.21  Aligned_cols=259  Identities=17%  Similarity=0.230  Sum_probs=201.9

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|++..++|.+.+.||+|+||.||+|++..++..||||.++....     ..+.+.+|                     
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E---------------------  266 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKE---------------------  266 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHH---------------------
T ss_pred             cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHH---------------------
Confidence            4578889999999999999999999999988888899988764211     00111111                     


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                         ...+..+.||||++++++|...        +..+|||||+++|+|.+++...+                  ...+++
T Consensus       267 ---~~~l~~l~hpniv~l~~~~~~~--------~~~~lv~E~~~~g~L~~~l~~~~------------------~~~~~~  317 (495)
T 1opk_A          267 ---AAVMKEIKHPNLVQLLGVCTRE--------PPFYIITEFMTYGNLLDYLRECN------------------RQEVSA  317 (495)
T ss_dssp             ---HHHHHHCCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHHSC------------------TTTSCH
T ss_pred             ---HHHHHhcCCCCEeeEEEEEecC--------CcEEEEEEccCCCCHHHHHHhcC------------------cCCCCH
Confidence               2235566799999999998753        35999999999999999998653                  125788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++....  
T Consensus       318 ~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  395 (495)
T 1opk_A          318 VVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--  395 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCE--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCC--
Confidence            999999999999999999999999999999999999999999999999987554433444556788999999987533  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++|||||||+||||++ |..|+.............             .......+.
T Consensus       396 --------------------~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~-------------~~~~~~~~~  442 (495)
T 1opk_A          396 --------------------FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-------------KDYRMERPE  442 (495)
T ss_dssp             --------------------ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-------------TTCCCCCCT
T ss_pred             --------------------CCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-------------cCCCCCCCC
Confidence                                4457799999999999999 777765433221111111             111233455


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .+++++.+||.+||+   .||++|||++++++.
T Consensus       443 ~~~~~l~~li~~cl~---~dP~~RPs~~el~~~  472 (495)
T 1opk_A          443 GCPEKVYELMRACWQ---WNPSDRPSFAEIHQA  472 (495)
T ss_dssp             TCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcC---cChhHCcCHHHHHHH
Confidence            689999999999999   777999999999863


No 157
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.4e-42  Score=356.70  Aligned_cols=271  Identities=18%  Similarity=0.265  Sum_probs=199.8

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEe-----cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIV-----PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF  205 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~  205 (502)
                      .+++..++|.+.+.||+|+||+||+|++.     .+++.||||+++..                         .......
T Consensus        65 ~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-------------------------~~~~~~~  119 (367)
T 3l9p_A           65 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-------------------------CSEQDEL  119 (367)
T ss_dssp             SCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-------------------------CCHHHHH
T ss_pred             hhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-------------------------cChhhHH
Confidence            45678889999999999999999999953     34455666655421                         1111111


Q ss_pred             hhhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcc
Q 039267          206 GDYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDST  285 (502)
Q Consensus       206 ~~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~  285 (502)
                       .+.. ....+..+.||||+++++++...        +..++||||+++|+|.+++...+..             .....
T Consensus       120 -~~~~-E~~~l~~l~hpnIv~~~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~  176 (367)
T 3l9p_A          120 -DFLM-EALIISKFNHQNIVRCIGVSLQS--------LPRFILLELMAGGDLKSFLRETRPR-------------PSQPS  176 (367)
T ss_dssp             -HHHH-HHHHHHHCCCTTBCCEEEEECSS--------SSCEEEEECCTTEEHHHHHHHHSCC-------------SSSCC
T ss_pred             -HHHH-HHHHHHhCCCCCCCeEEEEEecC--------CCCEEEEEeCCCCCHHHHHHhhccc-------------cCccc
Confidence             1111 22345666899999999998653        3589999999999999999876421             11223


Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC---cEEEeeccccccccCCCcc-CCCcccCCCCcCCcc
Q 039267          286 KRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG---QIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPE  361 (502)
Q Consensus       286 ~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~---~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE  361 (502)
                      .+++..++.++.||+.||+|||+++|+||||||+|||++.++   .+||+|||+++........ ......||+.|+|||
T Consensus       177 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE  256 (367)
T 3l9p_A          177 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE  256 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHH
Confidence            588999999999999999999999999999999999999555   5999999999865433222 334567899999999


Q ss_pred             cccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhc
Q 039267          362 LYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRL  440 (502)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (502)
                      ++.+..                      ++.++|||||||++|||++ |..|+..............             
T Consensus       257 ~~~~~~----------------------~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~-------------  301 (367)
T 3l9p_A          257 AFMEGI----------------------FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-------------  301 (367)
T ss_dssp             HHHHCC----------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-------------
T ss_pred             HhcCCC----------------------CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-------------
Confidence            987543                      4467799999999999998 8777655433221111111             


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      .........++.++.+|+.+||+   .||.+|||++++++|.++...
T Consensus       302 ~~~~~~~~~~~~~l~~li~~~l~---~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          302 GGRMDPPKNCPGPVYRIMTQCWQ---HQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcC---CCHhHCcCHHHHHHHHHHHhh
Confidence            11122345578999999999999   777999999999999887643


No 158
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=9.6e-42  Score=347.87  Aligned_cols=275  Identities=24%  Similarity=0.272  Sum_probs=198.0

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||.||+|++..+|+.||||++.....                         .......+. .....+
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~~~-~E~~~l   77 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-------------------------SEIFAKRAY-RELLLL   77 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS-------------------------SHHHHHHHH-HHHHHH
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc-------------------------chHHHHHHH-HHHHHH
Confidence            679999999999999999999988899999988764211                         000001111 112335


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++.......  .....++||||++ |+|.+++..                      .+++..++.++
T Consensus        78 ~~l~h~~iv~~~~~~~~~~~~~--~~~~~~lv~e~~~-~~l~~~~~~----------------------~~~~~~~~~i~  132 (353)
T 3coi_A           78 KHMQHENVIGLLDVFTPASSLR--NFYDFYLVMPFMQ-TDLQKIMGL----------------------KFSEEKIQYLV  132 (353)
T ss_dssp             HHCCCTTBCCCSEEECSCSSGG--GCCCCEEEEECCS-EEGGGTTTS----------------------CCCHHHHHHHH
T ss_pred             HhcCCCCcccHhheEecccccc--cceeEEEEecccc-CCHHHHhcC----------------------CCCHHHHHHHH
Confidence            5667999999999987643211  1123699999995 788877642                      37889999999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcc
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEP  376 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  376 (502)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||+++.....    .....+|+.|+|||++.+.          
T Consensus       133 ~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~----------  198 (353)
T 3coi_A          133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSW----------  198 (353)
T ss_dssp             HHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC------------CCSBCCSCHHHHSCC----------
T ss_pred             HHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC----ccccccCcCcCCHHHHhCc----------
Confidence            99999999999999999999999999999999999999999865432    2345789999999998752          


Q ss_pred             hhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch--hhHHHHHhhccChHHHHHh---------hh-c----
Q 039267          377 IAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK--NFNMEIKTAQYDLNKWREY---------TR-L----  440 (502)
Q Consensus       377 ~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~---------~~-~----  440 (502)
                                 ..++.++|||||||++|||++|..|+.....  .........+.....|...         .. .    
T Consensus       199 -----------~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (353)
T 3coi_A          199 -----------MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP  267 (353)
T ss_dssp             -----------SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCS
T ss_pred             -----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCC
Confidence                       2344678999999999999999988765432  2222333333322222110         00 0    


Q ss_pred             cCc-cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          441 RSD-FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       441 ~~~-~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      +.. ....+..+.++.+|+.+||+   .||++|||++++++||||+.....
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~---~dp~~Rpt~~e~l~hp~f~~~~~~  315 (353)
T 3coi_A          268 RKDFTQLFPRASPQAADLLEKMLE---LDVDKRLTAAQALTHPFFEPFRDP  315 (353)
T ss_dssp             SCCTTTTCTTSCHHHHHHHHHHSC---SCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             CccHHHhcCCcCHHHHHHHHHHcC---CCcccCCCHHHHhcCcchhhccCc
Confidence            011 12334678999999999999   777999999999999999965543


No 159
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=2.6e-42  Score=339.47  Aligned_cols=265  Identities=18%  Similarity=0.201  Sum_probs=199.4

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||.||+|+...+|+.||+|.+......                         ......+. .....
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------------------~~~~~~~~-~e~~~   58 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-------------------------EAEKQMLV-SEVNL   58 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-------------------------HHHHHHHH-HHHHH
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-------------------------HHHHHHHH-HHHHH
Confidence            46799999999999999999999888999999888753210                         00011111 12233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.||||+++++.+....      .+..++||||+++|+|.+++.....                ....+++..++.+
T Consensus        59 l~~l~h~~i~~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~i  116 (279)
T 2w5a_A           59 LRELKHPNIVRYYDRIIDRT------NTTLYIVMEYCEGGDLASVITKGTK----------------ERQYLDEEFVLRV  116 (279)
T ss_dssp             HHHCCCTTBCCEEEEEEEGG------GTEEEEEEECCTTEEHHHHHHHHHH----------------TTCCCCHHHHHHH
T ss_pred             HHhcCCCCCCeEEEEEecCC------CceEEEEEeCCCCCCHHHHHHhhcc----------------cCCCCCHHHHHHH
Confidence            55668999999999876432      3468999999999999999986521                1224889999999


Q ss_pred             HHHHHHHHHHHHHcC-----CeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          296 LRQIITSLKKIHDTG-----IVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       296 ~~qia~gL~yLH~~~-----IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      +.|++.||+|||+.+     |+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..   
T Consensus       117 ~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~---  192 (279)
T 2w5a_A          117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKTFVGTPYYMSPEQMNRMS---  192 (279)
T ss_dssp             HHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CH-HHHHHHSCCTTCCHHHHHCC----
T ss_pred             HHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccc-cccccCCCccccChHHhccCC---
Confidence            999999999999999     99999999999999999999999999987653321 122346899999999987543   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh-HHHHHhhccChHHHHHhhhccCccccccC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF-NMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                         ++.++||||||+++|||++|..|+....... ...+....              .......
T Consensus       193 -------------------~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~--------------~~~~~~~  239 (279)
T 2w5a_A          193 -------------------YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--------------FRRIPYR  239 (279)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--------------CCCCCTT
T ss_pred             -------------------CCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc--------------cccCCcc
Confidence                               3456799999999999999988875543211 11111110              1123345


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      .+.++.+++.+||+   .||++|||++|+++|||+....
T Consensus       240 ~~~~l~~li~~~l~---~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          240 YSDELNEIITRMLN---LKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             SCHHHHHHHHHHTC---SSGGGSCCHHHHHTSTTCCGGG
T ss_pred             cCHHHHHHHHHHcC---CCcccCCCHHHHHhChhhhhhc
Confidence            78999999999999   7779999999999999998543


No 160
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=4.3e-42  Score=345.57  Aligned_cols=279  Identities=14%  Similarity=0.154  Sum_probs=182.0

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCc---eeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchh
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNA---VVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGD  207 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~---~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~  207 (502)
                      ...+..++|.+.+.||+|+||+||+|++..++.   .||+|+++....                         .......
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~   71 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-------------------------ASSDIEE   71 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------------------------------CHHHHH
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-------------------------CHHHHHH
Confidence            345778899999999999999999999876654   677776654211                         1111111


Q ss_pred             hHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcccc
Q 039267          208 YEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKR  287 (502)
Q Consensus       208 ~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  287 (502)
                      +.+ +...+..+.||||+++++++........  ....++||||+++|+|.+++......              .....+
T Consensus        72 ~~~-E~~~l~~l~h~~iv~~~~~~~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~--------------~~~~~~  134 (323)
T 3qup_A           72 FLR-EAACMKEFDHPHVAKLVGVSLRSRAKGR--LPIPMVILPFMKHGDLHAFLLASRIG--------------ENPFNL  134 (323)
T ss_dssp             HHH-HHHHHTTCCCTTBCCCCEEEECC---------CEEEEEECCTTCBHHHHHHHHHC-----------------CCCC
T ss_pred             HHH-HHHHHHHCCCCceehhhceeeccccccC--CCccEEEEEeccCCcHHHHHHhhhcc--------------cccccc
Confidence            122 2233566689999999999876543111  11249999999999999999865311              112258


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCC
Q 039267          288 SALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       288 ~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~  366 (502)
                      ++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+.
T Consensus       135 ~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  214 (323)
T 3qup_A          135 PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADN  214 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCC
Confidence            89999999999999999999999999999999999999999999999999876544332 22344568899999998754


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      .                      ++.++|||||||++|||++ |..|+..............             .....
T Consensus       215 ~----------------------~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-------------~~~~~  259 (323)
T 3qup_A          215 L----------------------YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG-------------GNRLK  259 (323)
T ss_dssp             C----------------------CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-------------TCCCC
T ss_pred             C----------------------CCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc-------------CCCCC
Confidence            3                      4457799999999999999 7777654332221111111             11223


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcC-------HHHHhcCCccccCCC
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLS-------AAAALRHPYFLLGGD  489 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps-------~~evl~HP~f~~~~~  489 (502)
                      .....++++.+|+.+||+   .||++|||       ++++++|||+.....
T Consensus       260 ~~~~~~~~l~~li~~~l~---~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~  307 (323)
T 3qup_A          260 QPPECMEEVYDLMYQCWS---ADPKQRPSFTCLRMELENILGHLSVLSTSQ  307 (323)
T ss_dssp             CCTTCCHHHHHHHHHTTC---SSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred             CCCccCHHHHHHHHHHcc---CChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence            445678999999999999   77799999       888999999986543


No 161
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=4.1e-42  Score=363.17  Aligned_cols=256  Identities=15%  Similarity=0.198  Sum_probs=196.2

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|++..++|.+.+.||+|+||.||+|++. ++..||||.++....     ..+.+..|                     
T Consensus       181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~E---------------------  233 (454)
T 1qcf_A          181 DAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM-----SVEAFLAE---------------------  233 (454)
T ss_dssp             TCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB-----CHHHHHHH---------------------
T ss_pred             cceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc-----cHHHHHHH---------------------
Confidence            357889999999999999999999999874 567788887764211     01111111                     


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                         ...+..+.||||+++++++..         +..++||||+++|+|.+++...+                  ...+++
T Consensus       234 ---~~~l~~l~h~~iv~l~~~~~~---------~~~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~  283 (454)
T 1qcf_A          234 ---ANVMKTLQHDKLVKLHAVVTK---------EPIYIITEFMAKGSLLDFLKSDE------------------GSKQPL  283 (454)
T ss_dssp             ---HHHHTTCCCTTBCCEEEEECS---------SSCEEEECCCTTCBHHHHHHSHH------------------HHTCCH
T ss_pred             ---HHHHhhCCCCCEeeEEEEEeC---------CccEEEEeecCCCcHHHHHHhcc------------------CCCCCH
Confidence               123556679999999998752         25899999999999999998542                  124688


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++....  
T Consensus       284 ~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  361 (454)
T 1qcf_A          284 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--  361 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCC--
Confidence            899999999999999999999999999999999999999999999999976544333334556788999999997533  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++|||||||+||||++ |..|+..............+             ...+.+.
T Consensus       362 --------------------~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-------------~~~~~~~  408 (454)
T 1qcf_A          362 --------------------FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-------------YRMPRPE  408 (454)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-------------CCCCCCT
T ss_pred             --------------------CCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------CCCCCCC
Confidence                                4567899999999999999 88887543322111111111             1223345


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      .+++++.+||.+||+   .||++|||++++++
T Consensus       409 ~~~~~l~~li~~cl~---~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          409 NCPEELYNIMMRCWK---NRPEERPTFEYIQS  437 (454)
T ss_dssp             TSCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcc---CChhHCcCHHHHHH
Confidence            678999999999999   77799999999875


No 162
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=2.1e-41  Score=343.77  Aligned_cols=302  Identities=17%  Similarity=0.235  Sum_probs=207.7

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      ......++|.+.+.||+|+||.||+|+.  +|+.||+|++........          ....+..............+. 
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-   91 (348)
T 2pml_X           25 EKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKK----------RDFTKSNNDKISIKSKYDDFK-   91 (348)
T ss_dssp             SSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSC----------EEECCCSSSSCCEEEHHHHHH-
T ss_pred             hcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccch----------hhhccccchhhhHHhHHHHHH-
Confidence            3445668999999999999999999997  899999999886432111          000000000000000111222 


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      .....+..+.||||+++++++...        +..++||||+++|+|.+++.....            +.......+++.
T Consensus        92 ~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~~------------l~~~~~~~~~~~  151 (348)
T 2pml_X           92 NELQIITDIKNEYCLTCEGIITNY--------DEVYIIYEYMENDSILKFDEYFFV------------LDKNYTCFIPIQ  151 (348)
T ss_dssp             HHHHHHTTCCCTTBCCCSEEEESS--------SEEEEEEECCTTCBSSEESSSEES------------SCSSSCCCCCHH
T ss_pred             HHHHHHHhCCCCCcceEEEEEeeC--------CeEEEEEeccCCCcHHHHHHHhhh------------hhhccccCCCHH
Confidence            223346777899999999998763        469999999999999998332100            001112468999


Q ss_pred             HHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          291 IIKQILRQIITSLKKIHD-TGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~-~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      .++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++.....   ......||+.|+|||++.+..  
T Consensus       152 ~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~--  226 (348)
T 2pml_X          152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNES--  226 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCC--
T ss_pred             HHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCC--
Confidence            999999999999999999 99999999999999999999999999999876443   234567899999999997641  


Q ss_pred             CCCCCcchhhccchhhhccCCCC-cccHHHHHHHHHHHHhCCCCCCCcchhhH--HHHHhhccChHH----HHHhhhccC
Q 039267          370 PSPPPEPIAALLSPILWQLNSPD-LFDMYSAGIVLLQMAIPTLRSISGLKNFN--MEIKTAQYDLNK----WREYTRLRS  442 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~-k~DVwSlGvvL~elltg~~p~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~  442 (502)
                                         .++. ++||||||+++|||++|..|+........  ..+.......+.    +........
T Consensus       227 -------------------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  287 (348)
T 2pml_X          227 -------------------SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK  287 (348)
T ss_dssp             -------------------CEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--
T ss_pred             -------------------CCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccc
Confidence                               1222 67999999999999999988765443221  111111111100    000000000


Q ss_pred             ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchh
Q 039267          443 DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAA  492 (502)
Q Consensus       443 ~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~  492 (502)
                      ........+.++.+|+.+||+   .||.+|||++|+++||||+....+..
T Consensus       288 ~~~~~~~~~~~l~~li~~~L~---~dP~~Rps~~e~l~hp~f~~~~~~~~  334 (348)
T 2pml_X          288 STCSNNFLSNEDIDFLKLFLR---KNPAERITSEDALKHEWLADTNIEDL  334 (348)
T ss_dssp             ------CCCHHHHHHHHHHCC---SSGGGSCCHHHHHTSGGGTTCCHHHH
T ss_pred             cccchhhcCHHHHHHHHHHcc---CChhhCCCHHHHhcCccccCCCHHHH
Confidence            000124578999999999999   77799999999999999997665443


No 163
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=5.8e-42  Score=337.93  Aligned_cols=257  Identities=14%  Similarity=0.217  Sum_probs=196.3

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      +.|++..++|++.+.||+|+||+||+|.+. ++..||+|+++....                         ....   + 
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------------------~~~~---~-   66 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-------------------------SEDE---F-   66 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-------------------------CHHH---H-
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-------------------------CHHH---H-
Confidence            567899999999999999999999999874 666788887765321                         0011   1 


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      ..+...+..+.|+||+++++++...        +..++||||+++|+|.+++....                   ..+++
T Consensus        67 ~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~  119 (283)
T 3gen_A           67 IEEAKVMMNLSHEKLVQLYGVCTKQ--------RPIFIITEYMANGCLLNYLREMR-------------------HRFQT  119 (283)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEECSS--------SSEEEEECCCTTCBHHHHHHCGG-------------------GCCCH
T ss_pred             HHHHHHHhcCCCCCEeeEEEEEecC--------CCeEEEEeccCCCcHHHHHHHhc-------------------cCCCH
Confidence            1112345566799999999998653        35999999999999999998642                   25789


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++.+..  
T Consensus       120 ~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  197 (283)
T 3gen_A          120 QQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--  197 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCC--
Confidence            999999999999999999999999999999999999999999999999876554433445566788999999997543  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++||||||+++|||++ |..|+..............+             .....+.
T Consensus       198 --------------------~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-------------~~~~~~~  244 (283)
T 3gen_A          198 --------------------FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-------------LRLYRPH  244 (283)
T ss_dssp             --------------------CSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-------------CCCCCCT
T ss_pred             --------------------CCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-------------cCCCCCC
Confidence                                4456799999999999998 88887544322211111111             1122334


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..++.+.+|+.+||+   .||.+|||++++++|
T Consensus       245 ~~~~~l~~li~~~l~---~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          245 LASEKVYTIMYSCWH---EKADERPTFKILLSN  274 (283)
T ss_dssp             TCCHHHHHHHHHTTC---SSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHcc---CChhHCcCHHHHHHH
Confidence            568899999999999   777999999999976


No 164
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=1.3e-41  Score=343.20  Aligned_cols=260  Identities=14%  Similarity=0.133  Sum_probs=190.9

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|++.+.||+|+||+||+|++..++..+|+|+..+                     .+..... ......+.++ 
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K---------------------~~~~~~~-~~~~~~~~~e-   65 (325)
T 3kex_A            9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIK---------------------VIEDKSG-RQSFQAVTDH-   65 (325)
T ss_dssp             BCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEE---------------------EECCTTS-CSCBCSCCHH-
T ss_pred             hcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEE---------------------ecccccc-HHHHHHHHHH-
Confidence            3667889999999999999999999988888754443221                     1111000 0000111111 


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.|+||+++++++..         +..++||||+++|+|.+++...+                   ..+++..+
T Consensus        66 ~~~l~~l~h~~iv~~~~~~~~---------~~~~~v~e~~~~~~L~~~l~~~~-------------------~~~~~~~~  117 (325)
T 3kex_A           66 MLAIGSLDHAHIVRLLGLCPG---------SSLQLVTQYLPLGSLLDHVRQHR-------------------GALGPQLL  117 (325)
T ss_dssp             HHHHHTCCCTTBCCEEEEECB---------SSEEEEEECCTTCBSHHHHHSSG-------------------GGSCTTHH
T ss_pred             HHHHhcCCCCCcCeEEEEEcC---------CccEEEEEeCCCCCHHHHHHHcc-------------------ccCCHHHH
Confidence            123456679999999998742         35999999999999999998642                   25778889


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+..    
T Consensus       118 ~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----  193 (325)
T 3kex_A          118 LNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK----  193 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCC----
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCC----
Confidence            999999999999999999999999999999999999999999999987554332 334556788999999997543    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                        ++.++|||||||++|||++ |..|+.............             .......+..+
T Consensus       194 ------------------~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-------------~~~~~~~~~~~  242 (325)
T 3kex_A          194 ------------------YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-------------KGERLAQPQIC  242 (325)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-------------TTCBCCCCTTB
T ss_pred             ------------------CChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-------------cCCCCCCCCcC
Confidence                              4456799999999999999 888876543222211111             11122334456


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      +.++.+++.+||+   .||.+|||++++++|
T Consensus       243 ~~~~~~li~~~l~---~dp~~Rps~~el~~~  270 (325)
T 3kex_A          243 TIDVYMVMVKCWM---IDENIRPTFKELANE  270 (325)
T ss_dssp             CTTTTHHHHHHTC---SCTTTSCCHHHHHHH
T ss_pred             cHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence            8889999999999   777999999999876


No 165
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=8.2e-42  Score=345.05  Aligned_cols=258  Identities=15%  Similarity=0.158  Sum_probs=192.8

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCc---eeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNA---VVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~---~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      +++..++|.+.+.||+|+||.||+|++..++.   .||||+++....                          ......+
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~   97 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--------------------------ERQRRDF   97 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC--------------------------HHHHHHH
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC--------------------------HHHHHHH
Confidence            45778899999999999999999999875554   377776653211                          0000111


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      . .+...+..+.||||+++++++...        +..++||||+++|+|.+++....                   ..++
T Consensus        98 ~-~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~  149 (325)
T 3kul_A           98 L-SEASIMGQFDHPNIIRLEGVVTRG--------RLAMIVTEYMENGSLDTFLRTHD-------------------GQFT  149 (325)
T ss_dssp             H-HHHHHHTTCCCTTBCCEEEEECGG--------GCCEEEEECCTTCBHHHHHHTTT-------------------TCSC
T ss_pred             H-HHHHHHHhCCCCCCCcEEEEEEeC--------CccEEEeeCCCCCcHHHHHHhcc-------------------cCCC
Confidence            1 122346666899999999998653        35999999999999999997642                   2578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc--cCCCcccCCCCcCCcccccCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN--YVPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +..++.++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++.......  .......+|+.|+|||++.+.
T Consensus       150 ~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  229 (325)
T 3kul_A          150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR  229 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCC
Confidence            999999999999999999999999999999999999999999999999997754322  123344568899999999754


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      .                      ++.++|||||||++|||++ |..|+..............             .....
T Consensus       230 ~----------------------~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-------------~~~~~  274 (325)
T 3kul_A          230 T----------------------FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE-------------GYRLP  274 (325)
T ss_dssp             E----------------------ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-------------TCCCC
T ss_pred             C----------------------CCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-------------CCCCC
Confidence            3                      4456799999999999999 8888755433222111111             11223


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ....+++++.+|+.+||+   .||++|||++++++.
T Consensus       275 ~~~~~~~~l~~li~~~l~---~dp~~Rps~~eil~~  307 (325)
T 3kul_A          275 APMGCPHALHQLMLDCWH---KDRAQRPRFSQIVSV  307 (325)
T ss_dssp             CCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCCcCHHHHHHHHHHcc---CChhhCcCHHHHHHH
Confidence            345678999999999999   777999999998863


No 166
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=9.2e-42  Score=343.67  Aligned_cols=261  Identities=21%  Similarity=0.262  Sum_probs=200.6

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      +...++|++.+.||+|+||.||+|+...+|+.||||++........    ........+.              .  +. 
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~~--------------~--E~-   97 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW----GELPNGTRVP--------------M--EV-   97 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCE----EECTTCCEEE--------------H--HH-
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhh----hhhhhhhHHH--------------H--HH-
Confidence            3456789999999999999999999999999999999987433110    0000000110              1  11 


Q ss_pred             HHHhhhc--CCccccccccccccccCCccccCCceEEEEeecCC-CcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          213 NYRLSRA--APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGD-RTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       213 ~~~l~~~--~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                       ..+..+  .|+||+++++++...        +..++|+|++.+ ++|.+++...+                    .+++
T Consensus        98 -~~l~~l~~~~~~i~~~~~~~~~~--------~~~~lv~e~~~~~~~L~~~l~~~~--------------------~l~~  148 (320)
T 3a99_A           98 -VLLKKVSSGFSGVIRLLDWFERP--------DSFVLILERPEPVQDLFDFITERG--------------------ALQE  148 (320)
T ss_dssp             -HHHHHHCSSSCSBCCEEEEEECS--------SEEEEEEECCSSEEEHHHHHHHHC--------------------SCCH
T ss_pred             -HHHHhhccCCCCceEEEEEEecC--------CcEEEEEEcCCCCccHHHHHhccC--------------------CCCH
Confidence             112222  479999999998753        459999999976 89999998754                    5789


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLT-KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      ..++.++.||+.||+|||+.+|+||||||+|||++ .++.+||+|||+++......   .....||+.|+|||++.+...
T Consensus       149 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~  225 (320)
T 3a99_A          149 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRY  225 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCB
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCC
Confidence            99999999999999999999999999999999999 78999999999998765432   234578999999999865332


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                           ++.++||||||+++|||++|..|+.....    .. .               .......
T Consensus       226 ---------------------~~~~~Di~slG~il~el~~g~~pf~~~~~----~~-~---------------~~~~~~~  264 (320)
T 3a99_A          226 ---------------------HGRSAAVWSLGILLYDMVCGDIPFEHDEE----II-R---------------GQVFFRQ  264 (320)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHSSCSCCSHHH----HH-H---------------CCCCCSS
T ss_pred             ---------------------CCccchHHhHHHHHHHHHHCCCCCCChhh----hh-c---------------ccccccc
Confidence                                 23567999999999999999988754321    00 0               1112334


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      ..++++.+|+.+||+   .||++|||++++++||||+.....
T Consensus       265 ~~~~~~~~li~~~l~---~dp~~Rps~~~ll~hp~~~~~~~~  303 (320)
T 3a99_A          265 RVSSECQHLIRWCLA---LRPSDRPTFEEIQNHPWMQDVLLP  303 (320)
T ss_dssp             CCCHHHHHHHHHHTC---SSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred             cCCHHHHHHHHHHcc---CChhhCcCHHHHhcCHhhcCccCc
Confidence            578999999999999   777999999999999999976654


No 167
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=9.3e-42  Score=341.43  Aligned_cols=266  Identities=20%  Similarity=0.245  Sum_probs=192.9

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      +.-.++|++.+.||+|+||.||+|++..+++.||+|++.........    ....              ...+..+....
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~----~~~~--------------~~~~~~e~~~l   88 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWS----PLSD--------------SVTCPLEVALL   88 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------------------------CCCCHHHHHH
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccc----cchh--------------hHHHHHHHHHH
Confidence            44567899999999999999999999889999999998764321100    0000              00011111111


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEee-cCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKF-EGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ........|+||+++++++...        +..++|+|| +++++|.+++...+                    .+++..
T Consensus        89 ~~l~~~~~h~~i~~~~~~~~~~--------~~~~~v~e~~~~~~~L~~~l~~~~--------------------~~~~~~  140 (312)
T 2iwi_A           89 WKVGAGGGHPGVIRLLDWFETQ--------EGFMLVLERPLPAQDLFDYITEKG--------------------PLGEGP  140 (312)
T ss_dssp             HHHHSSCCCSSBCCEEEEC-------------CEEEEECCSSEEEHHHHHHHHC--------------------SCCHHH
T ss_pred             HhhcccCCCCCeeeEEEEEecC--------CeEEEEEEecCCCCCHHHHHHhcC--------------------CCCHHH
Confidence            1111222799999999988653        358999999 78999999998754                    578999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc-cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLT-KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      ++.++.||+.||+|||+++|+||||||+||+++ .++.+||+|||+++......   .....||+.|+|||++.+.... 
T Consensus       141 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~-  216 (312)
T 2iwi_A          141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYH-  216 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBC-
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCC-
Confidence            999999999999999999999999999999999 88999999999998765432   2355689999999998753321 


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                          +.++||||||+++|||++|..|+......    . .               .........
T Consensus       217 --------------------~~~~Di~slG~il~~l~~g~~pf~~~~~~----~-~---------------~~~~~~~~~  256 (312)
T 2iwi_A          217 --------------------ALPATVWSLGILLYDMVCGDIPFERDQEI----L-E---------------AELHFPAHV  256 (312)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHSSCSCCSHHHH----H-H---------------TCCCCCTTS
T ss_pred             --------------------CccchHHHHHHHHHHHHHCCCCCCChHHH----h-h---------------hccCCcccC
Confidence                                23679999999999999999887543210    0 0               112234557


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCch
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQA  491 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~  491 (502)
                      +.++.+|+.+||+   .||++|||++|+++||||+...+..
T Consensus       257 ~~~~~~li~~~l~---~~p~~Rps~~e~l~~~~~~~~~~~~  294 (312)
T 2iwi_A          257 SPDCCALIRRCLA---PKPSSRPSLEEILLDPWMQTPAEDV  294 (312)
T ss_dssp             CHHHHHHHHHHTC---SSTTTSCCHHHHHHSTTTCC-----
T ss_pred             CHHHHHHHHHHcc---CChhhCcCHHHHhcChhhcCchhcc
Confidence            8999999999999   7779999999999999999765543


No 168
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=4.7e-41  Score=336.81  Aligned_cols=268  Identities=20%  Similarity=0.195  Sum_probs=195.2

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|++..++|.+.++||+|+||+||+|++.   ..+|+|+++....                         .......+.
T Consensus        29 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~-------------------------~~~~~~~~~   80 (307)
T 3lb7_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDP-------------------------TPEQFQAFR   80 (307)
T ss_dssp             CCCBCCTTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSC-------------------------CHHHHHHHH
T ss_pred             ceEEecccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCC-------------------------CHHHHHHHH
Confidence            367899999999999999999999999753   2466666554221                         111111122


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      + +...+..+.|+||+++++++.         .+..++||||+++|+|.+++....                   ..+++
T Consensus        81 ~-E~~~l~~l~h~~iv~~~~~~~---------~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~  131 (307)
T 3lb7_A           81 N-EVAVLRKTRHVNILLFMGYMT---------KDNLAIVTQWCEGSSLYKHLHVQE-------------------TKFQM  131 (307)
T ss_dssp             H-HHHHHTTCCCTTBCCEEEEEC---------SSSCEEEEECCSSCBHHHHHHTSC-------------------CCCCH
T ss_pred             H-HHHHHHhCCCCCEEEEEEEEc---------cCcEEEEEecCCCCcHHHHHHhcc-------------------cCCCH
Confidence            2 223466678999999999764         235899999999999999997543                   25788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCC-CccCCCcccCCCCcCCcccccCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIG-KNYVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      ..+..++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++..... .........||+.|+|||++.....
T Consensus       132 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  211 (307)
T 3lb7_A          132 FQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN  211 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCC
Confidence            999999999999999999999999999999999999999999999999865432 1223345679999999999863221


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHH-HhhccChHHHHHhhhccCccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEI-KTAQYDLNKWREYTRLRSDFTIL  447 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                                         ..++.++|||||||++|||++|..|+........... ...+..         ........
T Consensus       212 -------------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~---------~~~~~~~~  263 (307)
T 3lb7_A          212 -------------------NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA---------SPDLSKLY  263 (307)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCC---------CCCSTTSC
T ss_pred             -------------------CCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCC---------Ccchhhhh
Confidence                               2345678999999999999999998764433222111 111111         01111234


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccc
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFL  485 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~  485 (502)
                      ..+++++.+|+.+||+   .||++|||+++++++.+..
T Consensus       264 ~~~~~~l~~li~~~l~---~~p~~RPs~~~il~~l~~l  298 (307)
T 3lb7_A          264 KNCPKAMKRLVADCVK---KVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             SSSCHHHHHHHHHHSC---SSSTTSCCHHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHhh---CChhhCcCHHHHHHHHHHH
Confidence            5678999999999999   7779999999999987654


No 169
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=2.9e-41  Score=338.04  Aligned_cols=271  Identities=21%  Similarity=0.252  Sum_probs=187.4

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      .....++|++.+.||+|+||.||+|++..+|+.||||++......                          .........
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~~   73 (318)
T 2dyl_A           20 YQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--------------------------EENKRILMD   73 (318)
T ss_dssp             EECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH--------------------------HHHHHHHHH
T ss_pred             hhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc--------------------------hHHHHHHHH
Confidence            345677899999999999999999999888999999988753210                          001111122


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ....+....||||+++++++...        +..++||||+ ++.+..+.....                   ..+++..
T Consensus        74 ~~~~~~~~~h~~i~~~~~~~~~~--------~~~~lv~e~~-~~~~~~l~~~~~-------------------~~~~~~~  125 (318)
T 2dyl_A           74 LDVVLKSHDCPYIVQCFGTFITN--------TDVFIAMELM-GTCAEKLKKRMQ-------------------GPIPERI  125 (318)
T ss_dssp             HHHHHHTTTCTTBCCEEEEEECS--------SEEEEEECCC-SEEHHHHHHHHT-------------------SCCCHHH
T ss_pred             HHHHHHhcCCCceeeEEEEEecC--------CcEEEEEecc-CCcHHHHHHHhc-------------------cCCCHHH
Confidence            22345667899999999998763        3699999999 566666655432                   2578999


Q ss_pred             HHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          292 IKQILRQIITSLKKIHDT-GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~-~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      ++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++...... 
T Consensus       126 ~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~-  202 (318)
T 2dyl_A          126 LGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--AKDRSAGCAAYMAPERIDPPDPT-  202 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----------------CCTTCCHHHHC------
T ss_pred             HHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc--cccccCCCccccChhhccccccc-
Confidence            999999999999999995 99999999999999999999999999998765432  22345789999999999642211 


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                      ...++.++|||||||++|||++|..|+...............          ...+..+.....
T Consensus       203 ----------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----------~~~~~~~~~~~~  256 (318)
T 2dyl_A          203 ----------------KPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ----------EEPPLLPGHMGF  256 (318)
T ss_dssp             -------------------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH----------SCCCCCCSSSCC
T ss_pred             ----------------ccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc----------cCCCCCCccCCC
Confidence                            134567889999999999999999887654333222111110          111222223357


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      +.++.+|+.+||+   .||.+|||++++++||||+...
T Consensus       257 ~~~l~~li~~~l~---~dp~~Rps~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          257 SGDFQSFVKDCLT---KDHRKRPKYNKLLEHSFIKRYE  291 (318)
T ss_dssp             CHHHHHHHHHHTC---SCTTTSCCHHHHTTSHHHHHHH
T ss_pred             CHHHHHHHHHHcc---CChhHCcCHHHHhhCHHHHhcc
Confidence            8999999999999   7779999999999999998543


No 170
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=8.3e-42  Score=344.27  Aligned_cols=277  Identities=17%  Similarity=0.240  Sum_probs=185.9

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .+.+..++|.+.+.||+|+||.||+|....+|+.||||++.....                          .........
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------------------------~~~~~~~~~   69 (327)
T 3aln_A           16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--------------------------EKEQKQLLM   69 (327)
T ss_dssp             EECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--------------------------HHHHHHHHH
T ss_pred             hcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--------------------------chHHHHHHH
Confidence            466888999999999999999999999988899999988764211                          001111222


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      .....+..+.||||+++++++...        +..++||||++ |+|.+++....               ......+++.
T Consensus        70 e~~~~~~~~~h~niv~~~~~~~~~--------~~~~lv~e~~~-~~l~~~~~~~~---------------~~~~~~~~~~  125 (327)
T 3aln_A           70 DLDVVMRSSDCPYIVQFYGALFRE--------GDCWICMELMS-TSFDKFYKYVY---------------SVLDDVIPEE  125 (327)
T ss_dssp             HHHHHHSSCCCTTBCCEEEEEECS--------SEEEEEECCCS-EEHHHHHHHHH---------------HTTCCCCCHH
T ss_pred             HHHHHHHcCCCCcEeeeeeEEEeC--------CceEEEEeecC-CChHHHHHHHH---------------hhhcccCcHH
Confidence            223346667899999999998753        46999999996 69988887421               0012357899


Q ss_pred             HHHHHHHHHHHHHHHHHHc-CCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDT-GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~-~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      .+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++..... 
T Consensus       126 ~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~-  202 (327)
T 3aln_A          126 ILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMAPERIDPSAS-  202 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc--ccccCCCCccccCceeeccccC-
Confidence            9999999999999999998 99999999999999999999999999998765432  2234478999999999843210 


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcc--ccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDF--TIL  447 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  447 (502)
                                       ...++.++|||||||++|||++|..|+...............          ...+.+  ...
T Consensus       203 -----------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----------~~~~~~~~~~~  255 (327)
T 3aln_A          203 -----------------RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK----------GDPPQLSNSEE  255 (327)
T ss_dssp             --------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCC----------SCCCCCCCCSS
T ss_pred             -----------------cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhc----------CCCCCCCCccc
Confidence                             133557889999999999999999887543322111100000          000111  122


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCc
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQ  490 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~  490 (502)
                      ...+.++.+|+.+||+   .||++|||++++++||||.....+
T Consensus       256 ~~~~~~l~~li~~~l~---~dp~~Rps~~ell~hp~~~~~~~~  295 (327)
T 3aln_A          256 REFSPSFINFVNLCLT---KDESKRPKYKELLKHPFILMYEER  295 (327)
T ss_dssp             CCCCHHHHHHHHHHTC---SSGGGSCCHHHHTTSHHHHHHHHS
T ss_pred             ccCCHHHHHHHHHHhh---CChhhCcCHHHHHhChHHHHhHhh
Confidence            3578999999999999   777999999999999999865443


No 171
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=7.5e-42  Score=345.35  Aligned_cols=259  Identities=17%  Similarity=0.183  Sum_probs=189.6

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||+||+|++..+++.+++|                     +++|.++..... ..... ...+.
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~---------------------vaiK~~~~~~~~-~~~~~-~~~E~   68 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---------------------VAIKELREATSP-KANKE-ILDEA   68 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC----CCEE---------------------EEEEEC--------CHHH-HHHHH
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEE---------------------EEEeecccccCH-HHHHH-HHHHH
Confidence            56778999999999999999999998887766443                     233333211110 11111 11222


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||++++++|...         ..++|+||+++|+|.+++...+                   ..+++..++
T Consensus        69 ~~l~~l~h~~iv~~~~~~~~~---------~~~~v~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~  120 (327)
T 3poz_A           69 YVMASVDNPHVCRLLGICLTS---------TVQLITQLMPFGCLLDYVREHK-------------------DNIGSQYLL  120 (327)
T ss_dssp             HHHHHCCBTTBCCEEEEEESS---------SEEEEEECCTTCBHHHHHHHST-------------------TSCCHHHHH
T ss_pred             HHHHhCCCCCEeEEEEEEecC---------CeEEEEEecCCCcHHHHHHhcC-------------------CCCCHHHHH
Confidence            346677899999999998642         4889999999999999998753                   257889999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+..     
T Consensus       121 ~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-----  195 (327)
T 3poz_A          121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-----  195 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCC-----
T ss_pred             HHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCC-----
Confidence            99999999999999999999999999999999999999999999876544322 234456788999999997543     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                       ++.++|||||||++|||++ |..|+..............             ..........+
T Consensus       196 -----------------~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-------------~~~~~~~~~~~  245 (327)
T 3poz_A          196 -----------------YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-------------GERLPQPPICT  245 (327)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-------------TCCCCCCTTBC
T ss_pred             -----------------CCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc-------------CCCCCCCccCC
Confidence                             4467799999999999999 8888754432222111111             11223345578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .++.+++.+||+   .||.+|||+++++++
T Consensus       246 ~~~~~li~~~l~---~~p~~Rps~~ell~~  272 (327)
T 3poz_A          246 IDVYMIMVKCWM---IDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHHTC---SCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcC---CChhhCCCHHHHHHH
Confidence            899999999999   777999999999976


No 172
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.5e-41  Score=344.69  Aligned_cols=265  Identities=18%  Similarity=0.168  Sum_probs=179.0

Q ss_pred             ccCCEEEEe-eeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          135 KRTDFVIGD-KLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       135 ~~~~~~~~~-~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      -.++|.+.+ .||+|+||+||+|++..+|+.||+|++....                                .....+.
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------------------------~~~~e~~   73 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------------------------------KARQEVD   73 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--------------------------------HHHHHHH
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--------------------------------HHHHHHH
Confidence            446788855 6999999999999998889999998875410                                0111222


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+....|+||+++++++......    ++..++||||+++|+|.+++...+                  ...+++..++
T Consensus        74 ~~~~~~~h~~i~~~~~~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~------------------~~~l~~~~~~  131 (336)
T 3fhr_A           74 HHWQASGGPHIVCILDVYENMHHG----KRCLLIIMECMEGGELFSRIQERG------------------DQAFTEREAA  131 (336)
T ss_dssp             HHHHHTTSTTBCCEEEEEEEEETT----EEEEEEEEECCTTEEHHHHHHTC-------------------CCCCBHHHHH
T ss_pred             HHHHhcCCCChHHHHHHHhhccCC----CceEEEEEeccCCCCHHHHHHhcC------------------CCCCCHHHHH
Confidence            335566899999999998753321    234899999999999999998653                  1358899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTK---RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.||+.||+|||+++|+||||||+|||++.   ++.+||+|||+++.....   ......||+.|+|||++.+..   
T Consensus       132 ~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~---  205 (336)
T 3fhr_A          132 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---ALQTPCYTPYYVAPEVLGPEK---  205 (336)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-------------------------CH---
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc---ccccCCCCcCccChhhhCCCC---
Confidence            99999999999999999999999999999976   456999999999875432   223557899999999986533   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                         ++.++|||||||++|||++|..|+..............      .............+...
T Consensus       206 -------------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~  260 (336)
T 3fhr_A          206 -------------------YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR------RIRLGQYGFPNPEWSEV  260 (336)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHSSCCC---------------------------CCCTTTSTTC
T ss_pred             -------------------CCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH------hhhccccccCchhhccC
Confidence                               33567999999999999999988754432211100000      00000011112233467


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                      +.++.+|+.+||+   .||.+|||++|+++||||+..
T Consensus       261 ~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          261 SEDAKQLIRLLLK---TDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             CHHHHHHHHHHSC---SSGGGSCCHHHHHHSHHHHTG
T ss_pred             CHHHHHHHHHHCC---CChhHCcCHHHHhcCcccccc
Confidence            9999999999999   777999999999999999854


No 173
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=344.13  Aligned_cols=281  Identities=17%  Similarity=0.215  Sum_probs=199.4

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      ++++..++|.+++.||+|+||+||+|++..+++.                  .......+|+|.++... .......+..
T Consensus        63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~------------------~~~~~~~vavK~~~~~~-~~~~~~~~~~  123 (382)
T 3tt0_A           63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKD------------------KPNRVTKVAVKMLKSDA-TEKDLSDLIS  123 (382)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTT------------------CTTCEEEEEEEEECTTC-CHHHHHHHHH
T ss_pred             ccccchhheEeeeEEecCCCeEEEEEEEcccccc------------------ccccceEEEEEeecccc-CHHHHHHHHH
Confidence            5678889999999999999999999997643321                  01112344555444221 1111122222


Q ss_pred             HHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          211 WFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       211 ~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      +.. .+..+ .||||+++++++...        +..++||||+++|+|.+++...+........    .........+++
T Consensus       124 E~~-~l~~l~~hpnIv~~~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~----~~~~~~~~~l~~  190 (382)
T 3tt0_A          124 EME-MMKMIGKHKNIINLLGACTQD--------GPLYVIVEYASKGNLREYLQARRPPGLEYSY----NPSHNPEEQLSS  190 (382)
T ss_dssp             HHH-HHHHHCCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHHTCCSSSSSCC----CCCSSCCCCCCH
T ss_pred             HHH-HHHHhcCCchhhhheeeeccC--------CceEEEEEecCCCcHHHHHHHhccccccccc----ccccccccccCH
Confidence            222 23444 799999999998753        4599999999999999999876421100000    000112235899


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      ..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+.. 
T Consensus       191 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-  269 (382)
T 3tt0_A          191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI-  269 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCC-
Confidence            999999999999999999999999999999999999999999999999876544322 334456788999999997643 


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTIL  447 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                                           ++.++|||||||++|||++ |..|+............             ........+
T Consensus       270 ---------------------~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~-------------~~~~~~~~~  315 (382)
T 3tt0_A          270 ---------------------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-------------KEGHRMDKP  315 (382)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-------------HTTCCCCCC
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-------------HcCCCCCCC
Confidence                                 4456799999999999999 88776543322111111             111122334


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..+++++.+|+.+||+   .||++|||+++++++
T Consensus       316 ~~~~~~l~~li~~~l~---~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          316 SNCTNELYMMMRDCWH---AVPSQRPTFKQLVED  346 (382)
T ss_dssp             SSCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence            5678999999999999   777999999999976


No 174
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=5.8e-42  Score=351.03  Aligned_cols=286  Identities=17%  Similarity=0.224  Sum_probs=200.6

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|.+.+.||+|+||+||+|++..+++.||||++....     ........|..+++++.....             
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~-------------   77 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----VYTEAAEDEIKLLQRVNDADN-------------   77 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHTCC-------------
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-----cchhhhhHHHHHHHHhhcccc-------------
Confidence            56678999999999999999999998899999999886421     111111222222222210000             


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      .......|+||+++++++......    ....++||||+ +++|.+++....                  ...+++..++
T Consensus        78 ~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~lv~e~~-~~~L~~~~~~~~------------------~~~~~~~~~~  134 (373)
T 1q8y_A           78 TKEDSMGANHILKLLDHFNHKGPN----GVHVVMVFEVL-GENLLALIKKYE------------------HRGIPLIYVK  134 (373)
T ss_dssp             SHHHHHHHTTBCCCCEEEEEEETT----EEEEEEEECCC-CEEHHHHHHHTT------------------TSCCCHHHHH
T ss_pred             cchhccccchHHHHHHHhhccCCC----CceEEEEEecC-CCCHHHHHHHhh------------------ccCCcHHHHH
Confidence            001123499999999998764321    22589999999 999999998753                  1247899999


Q ss_pred             HHHHHHHHHHHHHHHc-CCeeccCCCCcEEEc------cCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCC
Q 039267          294 QILRQIITSLKKIHDT-GIVHRDVKPANLVLT------KRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~-~IiHrDlKp~NILl~------~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  366 (502)
                      .++.||+.||+|||++ +|+||||||+|||++      .++.+||+|||+++.....    .....||+.|+|||++.+.
T Consensus       135 ~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~  210 (373)
T 1q8y_A          135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGA  210 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTC
T ss_pred             HHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCC
Confidence            9999999999999998 999999999999995      3448999999999876432    2345789999999999764


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc--------hhhHHHHHhhccChHHHHHhh
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL--------KNFNMEIKTAQYDLNKWREYT  438 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~  438 (502)
                      .                      ++.++|||||||++|||++|..|+....        ..........+.....+....
T Consensus       211 ~----------------------~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  268 (373)
T 1q8y_A          211 P----------------------WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNG  268 (373)
T ss_dssp             C----------------------CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHC
T ss_pred             C----------------------CCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhcc
Confidence            3                      4456799999999999999998875432        112222222222111111000


Q ss_pred             h--------------------------ccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          439 R--------------------------LRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       439 ~--------------------------~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      .                          ...........+.++.+||.+||+   .||++|||++|+++||||+....
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~---~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          269 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ---LDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             TTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGC---SSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             chhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhc---cCccccCCHHHHhhChhhhcccC
Confidence            0                          001112233457788999999999   77799999999999999997544


No 175
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=2.4e-41  Score=346.72  Aligned_cols=275  Identities=15%  Similarity=0.116  Sum_probs=198.1

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecC-----CceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPK-----NAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      ...++|.+.+.||+|+||+||+|++..+     ++.||||++....        .....|..+++++..         ..
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~~~~~~~---------~~   94 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN--------GPLFTELKFYQRAAK---------PE   94 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC--------HHHHHHHHHHHHHCC---------HH
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc--------hhHHHHHHHHHhhhh---------hH
Confidence            4567899999999999999999998654     4778888876532        112223333332221         00


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      .......+..+.|+||+++++++......    ....+|||||+ +++|.+++...+                   ..++
T Consensus        95 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~----~~~~~lv~e~~-g~~L~~~~~~~~-------------------~~l~  150 (364)
T 3op5_A           95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNG----KSYRFMIMDRF-GSDLQKIYEANA-------------------KRFS  150 (364)
T ss_dssp             HHHHHHHHTTCSCCCSCCEEEEEEEEETT----EEEEEEEEECE-EEEHHHHHHHTT-------------------SCCC
T ss_pred             HHHHHHHHhhccCCCCCeEEeeeeeccCC----cceEEEEEeCC-CCCHHHHHHhcc-------------------CCCC
Confidence            11112346777899999999998765321    23489999999 999999998753                   2589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEc--cCCcEEEeeccccccccCCCcc------CCCcccCCCCcCCc
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLT--KRGQIKLIDFGAATDLRIGKNY------VPNRTLLDPDYCPP  360 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~--~~~~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aP  360 (502)
                      +..++.++.||+.||+|||+++|+||||||+|||++  .++.+||+|||+++.+......      ......||+.||||
T Consensus       151 ~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  230 (364)
T 3op5_A          151 RKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSI  230 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCH
Confidence            999999999999999999999999999999999999  8899999999999876543221      11344599999999


Q ss_pred             ccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHH--HHh-hccChHHHHHh
Q 039267          361 ELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNME--IKT-AQYDLNKWREY  437 (502)
Q Consensus       361 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~--~~~-~~~~~~~~~~~  437 (502)
                      |++.+..                      ++.++|||||||++|||++|..|+..........  ... .......+...
T Consensus       231 E~~~~~~----------------------~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (364)
T 3op5_A          231 DAHNGVA----------------------PSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDK  288 (364)
T ss_dssp             HHHTTCC----------------------CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHhCCCC----------------------CCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHH
Confidence            9997643                      4457799999999999999999987533322211  111 11111111110


Q ss_pred             hhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          438 TRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       438 ~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                            .-....++.++.+++..||+   .||.+||+++++++
T Consensus       289 ------~~~~~~~~~~~~~li~~cl~---~~p~~RP~~~~l~~  322 (364)
T 3op5_A          289 ------CFPAANAPGEIAKYMETVKL---LDYTEKPLYENLRD  322 (364)
T ss_dssp             ------HSCTTCCCHHHHHHHHHHHT---CCTTCCCCHHHHHH
T ss_pred             ------hcccccCHHHHHHHHHHHhc---CCCCCCCCHHHHHH
Confidence                  00113568999999999999   77799999999875


No 176
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-41  Score=345.19  Aligned_cols=283  Identities=19%  Similarity=0.195  Sum_probs=199.7

Q ss_pred             ccccccccCCEEEEeeeeecCceEEEEEEEec-----CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcc
Q 039267          129 IGRRNLKRTDFVIGDKLGEGSFGVVYSGAIVP-----KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAE  203 (502)
Q Consensus       129 ~~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~  203 (502)
                      ...+++..++|.+.+.||+|+||.||+|++..     ++..||+|++.....                          ..
T Consensus        37 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~   90 (344)
T 1rjb_A           37 DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--------------------------SS   90 (344)
T ss_dssp             CGGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------------------------
T ss_pred             CcCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC--------------------------HH
Confidence            34678999999999999999999999999742     444666666653211                          01


Q ss_pred             cchhhHHHHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhh---ccccc
Q 039267          204 EFGDYEEWFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYM---FGRVL  279 (502)
Q Consensus       204 ~~~~~~~~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~---~~~~~  279 (502)
                      ....+..+. ..+..+ .||||+++++++...        +..++||||+++|+|.+++.......+.....   ..+..
T Consensus        91 ~~~~~~~E~-~~l~~l~~hp~iv~~~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~  161 (344)
T 1rjb_A           91 EREALMSEL-KMMTQLGSHENIVNLLGACTLS--------GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE  161 (344)
T ss_dssp             -CHHHHHHH-HHHHHHCCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHTTTTCC--------------
T ss_pred             HHHHHHHHH-HHHHhhcCCCCeeeEEEEEeeC--------CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccc
Confidence            111122222 234455 799999999998763        35999999999999999998764321111000   00011


Q ss_pred             cCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcC
Q 039267          280 EGEDSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYC  358 (502)
Q Consensus       280 ~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~  358 (502)
                      .......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ ......+|+.|+
T Consensus       162 ~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~  241 (344)
T 1rjb_A          162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWM  241 (344)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGC
T ss_pred             cccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCcc
Confidence            1122345899999999999999999999999999999999999999999999999999876544322 334556788999


Q ss_pred             CcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchh--hHHHHHhhccChHHHH
Q 039267          359 PPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKN--FNMEIKTAQYDLNKWR  435 (502)
Q Consensus       359 aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~--~~~~~~~~~~~~~~~~  435 (502)
                      |||++.+..                      ++.++|||||||++|||++ |..|+......  +......         
T Consensus       242 aPE~~~~~~----------------------~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~---------  290 (344)
T 1rjb_A          242 APESLFEGI----------------------YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQN---------  290 (344)
T ss_dssp             CHHHHHHCC----------------------CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHT---------
T ss_pred             CHHHhccCC----------------------CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhc---------
Confidence            999987533                      4456799999999999998 88776544322  1111111         


Q ss_pred             HhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccc
Q 039267          436 EYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFL  485 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~  485 (502)
                           ......+...++++.+|+.+||+   .||.+|||++++++|..-.
T Consensus       291 -----~~~~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~l~~~l~~~  332 (344)
T 1rjb_A          291 -----GFKMDQPFYATEEIYIIMQSCWA---FDSRKRPSFPNLTSFLGCQ  332 (344)
T ss_dssp             -----TCCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCCCCCCCCCCHHHHHHHHHHcC---CCchhCcCHHHHHHHHHHH
Confidence                 11122344578999999999999   7779999999999886543


No 177
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=1.2e-41  Score=340.25  Aligned_cols=278  Identities=17%  Similarity=0.173  Sum_probs=197.4

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEec-----CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVP-----KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF  205 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~  205 (502)
                      .+++..++|.+.+.||+|+||.||+|++..     +++.||+|++...                         . .....
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-------------------------~-~~~~~   70 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-------------------------A-SPSEL   70 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-------------------------C-CHHHH
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-------------------------C-CHHHH
Confidence            567888999999999999999999998742     3345555555421                         1 11111


Q ss_pred             hhhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcch----hhhccccccC
Q 039267          206 GDYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLE----TYMFGRVLEG  281 (502)
Q Consensus       206 ~~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~----~~~~~~~~~~  281 (502)
                      ..+.+ +...+..+.||||+++++++...        +..++||||+++|+|.+++...+......    ..........
T Consensus        71 ~~~~~-E~~~l~~l~hp~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  141 (314)
T 2ivs_A           71 RDLLS-EFNVLKQVNHPHVIKLYGACSQD--------GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH  141 (314)
T ss_dssp             HHHHH-HHHHHTTCCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHHTTTSTTEEC-------------
T ss_pred             HHHHH-HHHHHhhCCCCceeeEEEEEecC--------CceEEEEeecCCCCHHHHHHHHhhccCCccccccccccccccc
Confidence            12222 22346667899999999998653        45999999999999999998764210000    0000000011


Q ss_pred             CCccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCc
Q 039267          282 EDSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPP  360 (502)
Q Consensus       282 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aP  360 (502)
                      .....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+||
T Consensus       142 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  221 (314)
T 2ivs_A          142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI  221 (314)
T ss_dssp             ---CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCH
T ss_pred             ccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccCh
Confidence            12245899999999999999999999999999999999999999999999999999876544322 33445678899999


Q ss_pred             ccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhh
Q 039267          361 ELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTR  439 (502)
Q Consensus       361 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (502)
                      |++.+..                      ++.++|||||||++|||++ |..|+..............            
T Consensus       222 E~~~~~~----------------------~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~------------  267 (314)
T 2ivs_A          222 ESLFDHI----------------------YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT------------  267 (314)
T ss_dssp             HHHHHCE----------------------ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT------------
T ss_pred             hhhcCCC----------------------cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhc------------
Confidence            9987533                      3457799999999999999 8887654332211111111            


Q ss_pred             ccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          440 LRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       440 ~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                       ......+...++++.+|+.+||+   .||++|||+++++++
T Consensus       268 -~~~~~~~~~~~~~~~~li~~~l~---~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          268 -GHRMERPDNCSEEMYRLMLQCWK---QEPDKRPVFADISKD  305 (314)
T ss_dssp             -TCCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             -CCcCCCCccCCHHHHHHHHHHcc---CChhhCcCHHHHHHH
Confidence             11223345678999999999999   777999999999875


No 178
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.1e-41  Score=336.58  Aligned_cols=259  Identities=17%  Similarity=0.211  Sum_probs=202.1

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|++..++|.+.+.||+|+||+||+|++..++..||+|.+.....     ..+.+                       .
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~-----------------------~   57 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEF-----------------------L   57 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-----HHHHH-----------------------H
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-----HHHHH-----------------------H
Confidence            3677889999999999999999999999988888898888764211     00111                       1


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                       .....+..+.|+||+++++++...        +..++||||+++++|.+++....                  ...+++
T Consensus        58 -~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~~v~e~~~~~~L~~~~~~~~------------------~~~~~~  110 (288)
T 3kfa_A           58 -KEAAVMKEIKHPNLVQLLGVCTRE--------PPFYIITEFMTYGNLLDYLRECN------------------RQEVSA  110 (288)
T ss_dssp             -HHHHHHHHCCCTTBCCEEEEECSS--------SSEEEEEECCTTEEHHHHHHHCC------------------TTTSCH
T ss_pred             -HHHHHHHhCCCCCEeeEEEEEccC--------CCEEEEEEcCCCCcHHHHHHhcc------------------cCCccH
Confidence             112335566799999999998653        35999999999999999998753                  125789


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..++.++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++..............+|+.|+|||++.+..  
T Consensus       111 ~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  188 (288)
T 3kfa_A          111 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--  188 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCC--
T ss_pred             hHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCC--
Confidence            999999999999999999999999999999999999999999999999987655444445566788999999987543  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++||||||+++|||++ |..|+..............             ......+.
T Consensus       189 --------------------~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-------------~~~~~~~~  235 (288)
T 3kfa_A          189 --------------------FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-------------DYRMERPE  235 (288)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-------------TCCCCCCT
T ss_pred             --------------------CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-------------cCCCCCCC
Confidence                                4456799999999999999 7777654332222111111             11223445


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .+++++.+|+.+||+   .||.+|||++++++.
T Consensus       236 ~~~~~l~~li~~~l~---~dp~~Rps~~~~~~~  265 (288)
T 3kfa_A          236 GCPEKVYELMRACWQ---WNPSDRPSFAEIHQA  265 (288)
T ss_dssp             TCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHhC---CChhhCcCHHHHHHH
Confidence            678999999999999   777999999999763


No 179
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=2.2e-42  Score=348.09  Aligned_cols=269  Identities=20%  Similarity=0.222  Sum_probs=197.6

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      +...++|.+.+.||+|+||.||+|+. .+|+.||||++........                         .. .+. ..
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-------------------------~~-~~~-~e   77 (326)
T 3uim_A           26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGG-------------------------EL-QFQ-TE   77 (326)
T ss_dssp             HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----C-------------------------CC-HHH-HH
T ss_pred             HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchH-------------------------HH-HHH-HH
Confidence            36678899999999999999999985 4688899988875322100                         00 011 11


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.|+||+++++++...        +..++||||+++|+|.+++.....                ....+++..+
T Consensus        78 ~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~  133 (326)
T 3uim_A           78 VEMISMAVHRNLLRLRGFCMTP--------TERLLVYPYMANGSVASCLRERPE----------------SQPPLDWPKR  133 (326)
T ss_dssp             HHGGGTCCCTTBCCCCEEECCS--------SCCEEEEECCTTCBHHHHHHCCST----------------TCCCCCHHHH
T ss_pred             HHHHHhccCCCccceEEEEecC--------CceEEEEEeccCCCHHHHHHhccc----------------cCCCCCHHHH
Confidence            2235667799999999998753        358999999999999999987531                2235899999


Q ss_pred             HHHHHHHHHHHHHHHHc---CCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          293 KQILRQIITSLKKIHDT---GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~---~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++..............||+.|+|||++.+..  
T Consensus       134 ~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--  211 (326)
T 3uim_A          134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK--  211 (326)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSE--
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCC--
Confidence            99999999999999999   9999999999999999999999999999987655444445567999999999987543  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhh----------h
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYT----------R  439 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------~  439 (502)
                                          ++.++|||||||++|||++|..|+......     .........|....          .
T Consensus       212 --------------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  266 (326)
T 3uim_A          212 --------------------SSEKTDVFGYGVMLLELITGQRAFDLARLA-----NDDDVMLLDWVKGLLKEKKLEALVD  266 (326)
T ss_dssp             --------------------ECHHHHHHHHHHHHHHHHHCCCSBCHHHHT-----TTSCSBHHHHHTTTTSSCCSTTSSC
T ss_pred             --------------------CCccccchhHHHHHHHHHhCCCcccccccc-----cccchhHHHHHHHHhhchhhhhhcC
Confidence                                345679999999999999999887411100     00001111111100          0


Q ss_pred             ccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCc
Q 039267          440 LRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPY  483 (502)
Q Consensus       440 ~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~  483 (502)
                      ...........+.++.+++.+||+   .||.+|||++++++|-.
T Consensus       267 ~~~~~~~~~~~~~~l~~li~~cl~---~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          267 VDLQGNYKDEEVEQLIQVALLCTQ---SSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             TTCTTSCCHHHHHHHHHHHHHHTC---SCGGGSCCHHHHHHHHH
T ss_pred             hhhccccCHHHHHHHHHHHHHHhC---cCCccCCCHHHHHHHhc
Confidence            000111223345788999999999   77799999999999854


No 180
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=1.7e-41  Score=339.96  Aligned_cols=280  Identities=18%  Similarity=0.257  Sum_probs=193.6

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      .++..++|.+.+.||+|+||.||+|+.. +++.||+|++......                         ......+.++
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~~~~~~E   76 (313)
T 3cek_A           23 MSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEAD-------------------------NQTLDSYRNE   76 (313)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCC-------------------------HHHHHHHHHH
T ss_pred             eeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccccc-------------------------ccchHHHHHH
Confidence            3467778999999999999999999874 5788888887653210                         0111111111


Q ss_pred             HHHHhhhc--CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          212 FNYRLSRA--APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       212 ~~~~l~~~--~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      .. .+..+  .|+||+++++++...        +..++||| +.+++|.+++...+                    .+++
T Consensus        77 ~~-~l~~l~~~~~~iv~~~~~~~~~--------~~~~lv~e-~~~~~L~~~l~~~~--------------------~~~~  126 (313)
T 3cek_A           77 IA-YLNKLQQHSDKIIRLYDYEITD--------QYIYMVME-CGNIDLNSWLKKKK--------------------SIDP  126 (313)
T ss_dssp             HH-HHHHHGGGCTTBCCEEEEEECS--------SEEEEEEC-CCSEEHHHHHHHCS--------------------SCCH
T ss_pred             HH-HHHhccccCCceEEEEEEeecC--------CEEEEEEe-cCCCcHHHHHHhcC--------------------CCCH
Confidence            11 12233  369999999988763        35999999 55899999998754                    5788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      ..++.++.||+.||+|||+++|+||||||+|||++ ++.+||+|||+++........ ......||+.|+|||++.+...
T Consensus       127 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  205 (313)
T 3cek_A          127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS  205 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhccc
Confidence            89999999999999999999999999999999996 589999999999876544322 2345578999999999875322


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                      ....           ......++.++||||||+++|||++|..|+............           ............
T Consensus       206 ~~~~-----------~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~~~  263 (313)
T 3cek_A          206 SREN-----------GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-----------IIDPNHEIEFPD  263 (313)
T ss_dssp             --------------------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH-----------HHCTTSCCCCCC
T ss_pred             cccc-----------ccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH-----------HHhcccccCCcc
Confidence            1100           000134667899999999999999999987654433222111           111112223344


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchhH
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAAA  493 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~~  493 (502)
                      ..+.++.+|+.+||+   .||++|||++|+++||||+........
T Consensus       264 ~~~~~l~~li~~~l~---~dp~~Rps~~ell~h~~~~~~~~~~~~  305 (313)
T 3cek_A          264 IPEKDLQDVLKCCLK---RDPKQRISIPELLAHPYVQIQTHPVNQ  305 (313)
T ss_dssp             CSCHHHHHHHHHHTC---SSTTTSCCHHHHHTSHHHHCC------
T ss_pred             cchHHHHHHHHHHcc---CCcccCcCHHHHhcCccccCCCCchhh
Confidence            568899999999999   777999999999999999966554433


No 181
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=2.5e-41  Score=343.11  Aligned_cols=278  Identities=21%  Similarity=0.250  Sum_probs=193.6

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCC-ceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKN-AVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~-~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .-.++|++.+.||+|+||+||+|+...++ +.||+|+++....     ..+....|..+++.++                
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~----------------   74 (355)
T 2eu9_A           16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK-----YREAARLEINVLKKIK----------------   74 (355)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHH-----HHHHHHHHHHHHHHHH----------------
T ss_pred             eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccccc-----chhHHHHHHHHHHHHh----------------
Confidence            34578999999999999999999987666 5788887753110     0011111111221111                


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                        ......|.+++.+.+++..        .+..++||||+ +++|.+++....                  ...+++..+
T Consensus        75 --~~~~~~~~~~~~~~~~~~~--------~~~~~lv~e~~-~~~l~~~l~~~~------------------~~~~~~~~~  125 (355)
T 2eu9_A           75 --EKDKENKFLCVLMSDWFNF--------HGHMCIAFELL-GKNTFEFLKENN------------------FQPYPLPHV  125 (355)
T ss_dssp             --HHCTTSCSCBCCEEEEEEE--------TTEEEEEEECC-CCBHHHHHHHTT------------------TCCCCHHHH
T ss_pred             --hcCCCCceeEEEeeeeeee--------CCeEEEEEecc-CCChHHHHHhcc------------------CCCCCHHHH
Confidence              0111223347888777755        34699999999 788888887653                  125789999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEE-------------------ccCCcEEEeeccccccccCCCccCCCcccC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVL-------------------TKRGQIKLIDFGAATDLRIGKNYVPNRTLL  353 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl-------------------~~~~~~kL~DFGla~~~~~~~~~~~~~~~g  353 (502)
                      +.++.||+.||+|||+++|+||||||+|||+                   +.++.+||+|||+++.....    .....|
T Consensus       126 ~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~g  201 (355)
T 2eu9_A          126 RHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVA  201 (355)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCS
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc----ccCCcC
Confidence            9999999999999999999999999999999                   67889999999999864432    235578


Q ss_pred             CCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHHHhhccCh
Q 039267          354 DPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEIKTAQYDL  431 (502)
Q Consensus       354 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~~~~~~~~  431 (502)
                      |+.|+|||++.+..                      ++.++|||||||++|||++|..|+.......  .......+...
T Consensus       202 t~~y~aPE~~~~~~----------------------~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p  259 (355)
T 2eu9_A          202 TRHYRPPEVILELG----------------------WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP  259 (355)
T ss_dssp             CGGGCCHHHHTTCC----------------------CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             CCcccCCeeeecCC----------------------CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc
Confidence            99999999997543                      4467799999999999999998876544322  22222222222


Q ss_pred             HHHHHhhhc----------------------------cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCc
Q 039267          432 NKWREYTRL----------------------------RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPY  483 (502)
Q Consensus       432 ~~~~~~~~~----------------------------~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~  483 (502)
                      ..+......                            ..........+.++.+|+.+||+   .||++|||++|+++|||
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~---~dP~~Rpt~~e~l~hp~  336 (355)
T 2eu9_A          260 SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE---FDPAQRITLAEALLHPF  336 (355)
T ss_dssp             HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC---SSTTTSCCHHHHTTSGG
T ss_pred             HHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc---CChhhCcCHHHHhcChh
Confidence            111111000                            00000111234578899999999   77799999999999999


Q ss_pred             cccCCCc
Q 039267          484 FLLGGDQ  490 (502)
Q Consensus       484 f~~~~~~  490 (502)
                      |+....+
T Consensus       337 f~~~~~~  343 (355)
T 2eu9_A          337 FAGLTPE  343 (355)
T ss_dssp             GGGCCHH
T ss_pred             hcCCChh
Confidence            9976543


No 182
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.5e-41  Score=330.03  Aligned_cols=257  Identities=16%  Similarity=0.226  Sum_probs=195.6

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      |+|.+..++|.+.+.||+|+||.||+|++. ++..||+|.+.....                         ..+   .+.
T Consensus         1 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-------------------------~~~---~~~   51 (267)
T 3t9t_A            1 GKWVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-------------------------SEE---DFI   51 (267)
T ss_dssp             --CBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-------------------------CHH---HHH
T ss_pred             CceEEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-------------------------CHH---HHH
Confidence            356788899999999999999999999874 566778877764221                         001   111


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                       .....+..+.||||+++++++...        +..++||||+++++|.+++....                   ..+++
T Consensus        52 -~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~-------------------~~~~~  103 (267)
T 3t9t_A           52 -EEAEVMMKLSHPKLVQLYGVCLEQ--------APICLVTEFMEHGCLSDYLRTQR-------------------GLFAA  103 (267)
T ss_dssp             -HHHHHHHTCCCTTBCCEEEEECSS--------SSCEEEECCCTTCBHHHHHHHTT-------------------TCCCH
T ss_pred             -HHHHHHHhCCCCCEeeEEEEEccC--------CCeEEEEeCCCCCcHHHHHhhCc-------------------ccCCH
Confidence             112235566799999999998653        35999999999999999998653                   24788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++..............+|+.|+|||++.+..  
T Consensus       104 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  181 (267)
T 3t9t_A          104 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--  181 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCC--
Confidence            999999999999999999999999999999999999999999999999876544333344556788999999987533  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++||||||+++|||++ |..|+..............+             .....+.
T Consensus       182 --------------------~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-------------~~~~~~~  228 (267)
T 3t9t_A          182 --------------------YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-------------FRLYKPR  228 (267)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-------------CCCCCCT
T ss_pred             --------------------ccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-------------CcCCCCc
Confidence                                3456799999999999999 77776543322111100000             1112334


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..+.++.+++.+||+   .||++|||+++++++
T Consensus       229 ~~~~~l~~li~~~l~---~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          229 LASTHVYQIMNHCWR---ERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TSCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             cCcHHHHHHHHHHcc---CChhhCcCHHHHHHH
Confidence            568899999999999   777999999999874


No 183
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=2e-41  Score=334.20  Aligned_cols=258  Identities=15%  Similarity=0.182  Sum_probs=181.1

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCC---ceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchh
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKN---AVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGD  207 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~---~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~  207 (502)
                      .+++..++|++.+.||+|+||.||+|++..++   ..||+|.+....                         . ......
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-------------------------~-~~~~~~   62 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-------------------------S-DSVREK   62 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-------------------------S-HHHHHH
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-------------------------C-HHHHHH
Confidence            45678889999999999999999999986432   345555544211                         0 011111


Q ss_pred             hHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcccc
Q 039267          208 YEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKR  287 (502)
Q Consensus       208 ~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  287 (502)
                      + ......+..+.||||+++++++..         +..++||||+++|+|.+++...+                   ..+
T Consensus        63 ~-~~e~~~l~~l~h~~iv~~~~~~~~---------~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~  113 (281)
T 1mp8_A           63 F-LQEALTMRQFDHPHIVKLIGVITE---------NPVWIIMELCTLGELRSFLQVRK-------------------YSL  113 (281)
T ss_dssp             H-HHHHHHHHTCCCTTBCCEEEEECS---------SSCEEEEECCTTEEHHHHHHHTT-------------------TTS
T ss_pred             H-HHHHHHHHhCCCCccceEEEEEcc---------CccEEEEecCCCCCHHHHHHhcC-------------------CCC
Confidence            1 122234566789999999998732         35899999999999999998653                   247


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCC
Q 039267          288 SALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPE  367 (502)
Q Consensus       288 ~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  367 (502)
                      ++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++.+..
T Consensus       114 ~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  193 (281)
T 1mp8_A          114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR  193 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCC
Confidence            88999999999999999999999999999999999999999999999999987655443444556788999999987533


Q ss_pred             CCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccc
Q 039267          368 ETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTI  446 (502)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (502)
                                            ++.++||||||+++|||++ |..|+.............             .......
T Consensus       194 ----------------------~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~-------------~~~~~~~  238 (281)
T 1mp8_A          194 ----------------------FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-------------NGERLPM  238 (281)
T ss_dssp             ----------------------CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-------------TTCCCCC
T ss_pred             ----------------------CCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH-------------cCCCCCC
Confidence                                  4456799999999999997 777765433221111000             0112234


Q ss_pred             ccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          447 LDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       447 ~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      +..+++++.+++.+||+   .||++|||+++++++
T Consensus       239 ~~~~~~~l~~li~~~l~---~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          239 PPNCPPTLYSLMTKCWA---YDPSRRPRFTELKAQ  270 (281)
T ss_dssp             CTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcc---CChhhCcCHHHHHHH
Confidence            45679999999999999   777999999999864


No 184
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=7.4e-41  Score=331.97  Aligned_cols=259  Identities=16%  Similarity=0.108  Sum_probs=193.5

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+.+.||+|+||.||+|+...+|+.||+|++......      .....|..                      
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~----------------------   57 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA------PQLRDEYR----------------------   57 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS------CCHHHHHH----------------------
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc------HHHHHHHH----------------------
Confidence            45667899999999999999999999889999999987642210      11111111                      


Q ss_pred             HHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          213 NYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       213 ~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                        .+..+ .|+|++.+++++..        .+..++||||+ +++|.+++...+                   ..+++..
T Consensus        58 --~~~~l~~~~~i~~~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~-------------------~~~~~~~  107 (298)
T 1csn_A           58 --TYKLLAGCTGIPNVYYFGQE--------GLHNVLVIDLL-GPSLEDLLDLCG-------------------RKFSVKT  107 (298)
T ss_dssp             --HHHHTTTCTTCCCEEEEEEE--------TTEEEEEEECC-CCBHHHHHHHTT-------------------TCCCHHH
T ss_pred             --HHHHHhcCCCCCeEEeecCC--------CceeEEEEEec-CCCHHHHHHHhc-------------------cCCCHHH
Confidence              12223 69999999988764        34689999999 999999998653                   2478999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc-----EEEeeccccccccCCCcc------CCCcccCCCCcCCc
Q 039267          292 IKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ-----IKLIDFGAATDLRIGKNY------VPNRTLLDPDYCPP  360 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~-----~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aP  360 (502)
                      ++.++.||+.||+|||+++|+||||||+|||++.++.     +||+|||+++........      ......||+.|+||
T Consensus       108 ~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  187 (298)
T 1csn_A          108 VAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI  187 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCc
Confidence            9999999999999999999999999999999987776     999999999977544321      23456799999999


Q ss_pred             ccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH-HHHHhhccChHHHHHhhh
Q 039267          361 ELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN-MEIKTAQYDLNKWREYTR  439 (502)
Q Consensus       361 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~  439 (502)
                      |++.+..                      ++.++|||||||++|||++|..|+........ .......       ....
T Consensus       188 E~~~~~~----------------------~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-------~~~~  238 (298)
T 1csn_A          188 NTHLGRE----------------------QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG-------EKKQ  238 (298)
T ss_dssp             HHHTTCC----------------------CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH-------HHHH
T ss_pred             hhhcCCC----------------------CChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH-------hhcc
Confidence            9987643                      34567999999999999999998765332111 1111000       0000


Q ss_pred             ccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          440 LRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       440 ~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..+.......+++++.+|+.+||+   .||++|||++++++.
T Consensus       239 ~~~~~~~~~~~~~~l~~li~~~l~---~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          239 STPLRELCAGFPEEFYKYMHYARN---LAFDATPDYDYLQGL  277 (298)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHH---CCTTCCCCHHHHHHH
T ss_pred             CccHHHHHhhCcHHHHHHHHHHhc---CCcccCCCHHHHHHH
Confidence            001111233568999999999999   777999999998754


No 185
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=8.2e-41  Score=330.37  Aligned_cols=261  Identities=18%  Similarity=0.194  Sum_probs=195.9

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|++.+.||+|+||+||+|++..+++.||+|++........          ....+.          ...+ ..+
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~----------~~~~-~~E   73 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE----------TEMIEK----------FQEF-QRE   73 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCC----------HHHHCC----------SHHH-HHH
T ss_pred             hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccc----------hhHHHH----------HHHH-HHH
Confidence            3667889999999999999999999988999999998876432111          000000          0111 112


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.|+||+++++++..          ..++||||+++|+|.+++....                   ..+++..+
T Consensus        74 ~~~l~~l~h~~i~~~~~~~~~----------~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~~~  124 (287)
T 4f0f_A           74 VFIMSNLNHPNIVKLYGLMHN----------PPRMVMEFVPCGDLYHRLLDKA-------------------HPIKWSVK  124 (287)
T ss_dssp             HHHHTTCCCTTBCCEEEEETT----------TTEEEEECCTTCBHHHHHHCTT-------------------SCCCHHHH
T ss_pred             HHHHHhCCCCCchhhheeecC----------CCeEEEEecCCCCHHHHHhccc-------------------CCccHHHH
Confidence            234566689999999998753          2579999999999999997653                   25789999


Q ss_pred             HHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCc-----EEEeeccccccccCCCccCCCcccCCCCcCCcccccC
Q 039267          293 KQILRQIITSLKKIHDTG--IVHRDVKPANLVLTKRGQ-----IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~--IiHrDlKp~NILl~~~~~-----~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~  365 (502)
                      +.++.|++.||+|||+++  |+||||||+|||++.++.     +||+|||+++.....    .....||+.|+|||++..
T Consensus       125 ~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~  200 (287)
T 4f0f_A          125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS----VSGLLGNFQWMAPETIGA  200 (287)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC----EECCCCCCTTSCGGGSSC
T ss_pred             HHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc----ccccCCCccccCchhhcc
Confidence            999999999999999999  999999999999988776     999999999854332    234578999999999843


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      ..                    ..++.++|||||||++|||++|..|+............          ..........
T Consensus       201 ~~--------------------~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~----------~~~~~~~~~~  250 (287)
T 4f0f_A          201 EE--------------------ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN----------MIREEGLRPT  250 (287)
T ss_dssp             SS--------------------CEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHH----------HHHHSCCCCC
T ss_pred             CC--------------------CCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHH----------HHhccCCCCC
Confidence            21                    23456789999999999999999887544322221111          0111112223


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ....+++++.+|+.+||+   .||.+|||++++++
T Consensus       251 ~~~~~~~~l~~li~~~l~---~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWS---GDPKKRPHFSYIVK  282 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             CCcccCHHHHHHHHHHhc---CChhhCcCHHHHHH
Confidence            455678999999999999   77799999999986


No 186
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=2.3e-41  Score=336.46  Aligned_cols=271  Identities=18%  Similarity=0.178  Sum_probs=197.9

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEE----ecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAI----VPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~----~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      .+..+.|++.+.||+|+||.||+|++    ..+++.||+|++.....                          ......+
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~   70 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--------------------------GNHIADL   70 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------------------------------CCHHHH
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--------------------------chhHHHH
Confidence            45667799999999999999999984    45667777777654211                          0001111


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      . .+...+..+.|+||+++++++....      ....++||||+++|+|.+++....                   ..++
T Consensus        71 ~-~E~~~l~~l~h~~i~~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~  124 (302)
T 4e5w_A           71 K-KEIEILRNLYHENIVKYKGICTEDG------GNGIKLIMEFLPSGSLKEYLPKNK-------------------NKIN  124 (302)
T ss_dssp             H-HHHHHHHTCCCTTBCCEEEEEEC---------CCEEEEEECCTTCBHHHHHHHHT-------------------TTCC
T ss_pred             H-HHHHHHHhCCCCCeeeeeeEEecCC------CceEEEEEEeCCCCcHHHHHHhcc-------------------ccCC
Confidence            1 1223456668999999999987642      235899999999999999997653                   2578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc--cCCCcccCCCCcCCcccccCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN--YVPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.......  .......+|..|+|||++.+.
T Consensus       125 ~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  204 (302)
T 4e5w_A          125 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQS  204 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCC
Confidence            999999999999999999999999999999999999999999999999988765432  234456688899999998754


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhcc--ChHHHHHhhhccCcc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQY--DLNKWREYTRLRSDF  444 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  444 (502)
                      .                      ++.++||||||+++|||++|..|+......+.........  ...............
T Consensus       205 ~----------------------~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (302)
T 4e5w_A          205 K----------------------FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL  262 (302)
T ss_dssp             E----------------------EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCC
T ss_pred             C----------------------CCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCC
Confidence            3                      3356799999999999999988754443322222111110  111112222223344


Q ss_pred             ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          445 TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       445 ~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ..+..+++++.+|+.+||+   .||.+|||++++++
T Consensus       263 ~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          263 PCPPNCPDEVYQLMRKCWE---FQPSNRTSFQNLIE  295 (302)
T ss_dssp             CCCTTCCHHHHHHHHHTTC---SSGGGSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcC---CCCCCCCCHHHHHH
Confidence            4566789999999999999   77799999999985


No 187
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=6.6e-41  Score=327.16  Aligned_cols=257  Identities=12%  Similarity=0.026  Sum_probs=194.8

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      +++..++|.+.+.||+|+||+||+|++  +|+.||+|+++.....  ....+.+.+|.                      
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~--~~~~~~~~~E~----------------------   58 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWS--TRKSRDFNEEC----------------------   58 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCC--HHHHHHHHHHG----------------------
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccC--HHHHHHHHHHH----------------------
Confidence            456778999999999999999999996  4888888887753221  00001111222                      


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                        ..+..+.||||+++++++....      .+..++||||+++|+|.+++...+                  ...+++..
T Consensus        59 --~~l~~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~  112 (271)
T 3kmu_A           59 --PRLRIFSHPNVLPVLGACQSPP------APHPTLITHWMPYGSLYNVLHEGT------------------NFVVDQSQ  112 (271)
T ss_dssp             --GGGCCCSCTTEECEEEEECTTT------SSSCEEEEECCTTCBHHHHHHSCS------------------SCCCCHHH
T ss_pred             --HHHHhcCCCchhheEEEEccCC------CCCeEeeecccCCCcHHHHHhhcc------------------cCCCCHHH
Confidence              2355567999999999987642      246899999999999999998653                  12478999


Q ss_pred             HHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          292 IKQILRQIITSLKKIHDTG--IVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~~--IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ++.++.||+.||+|||+++  |+||||||+|||++.++.++|+|||++....      .....||+.|+|||++.+....
T Consensus       113 ~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~  186 (271)
T 3kmu_A          113 AVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ------SPGRMYAPAWVAPEALQKKPED  186 (271)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS------CTTCBSCGGGSCHHHHHSCGGG
T ss_pred             HHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec------ccCccCCccccChhhhccCCCC
Confidence            9999999999999999999  9999999999999999999999999876432      2345789999999999764322


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccC
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                      .                   ++.++||||||+++|||++|..|+...........            ..........+..
T Consensus       187 ~-------------------~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~  235 (271)
T 3kmu_A          187 T-------------------NRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK------------VALEGLRPTIPPG  235 (271)
T ss_dssp             S-------------------CHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH------------HHHSCCCCCCCTT
T ss_pred             C-------------------CCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH------------HHhcCCCCCCCCC
Confidence            2                   22367999999999999999988754432221111            1111122234456


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      .++++.+++.+||+   .||++|||++++++
T Consensus       236 ~~~~~~~li~~~l~---~~p~~Rps~~~il~  263 (271)
T 3kmu_A          236 ISPHVSKLMKICMN---EDPAKRPKFDMIVP  263 (271)
T ss_dssp             CCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHcC---CChhhCcCHHHHHH
Confidence            79999999999999   77799999999985


No 188
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=2.7e-41  Score=330.82  Aligned_cols=254  Identities=15%  Similarity=0.151  Sum_probs=183.6

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      ++..++|.+.+.||+|+||.||+|++  +|..||+|++........                       ...... ...+
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~-----------------------~~~~~~-~~~e   56 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDI-----------------------SQTIEN-VRQE   56 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC---------------------------------CHHH-HHHH
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccH-----------------------HHHHHH-HHHH
Confidence            35667899999999999999999986  588888888765322100                       000011 1112


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++...        +..++||||+++++|.+++...                     .+++..+
T Consensus        57 ~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~---------------------~~~~~~~  107 (271)
T 3dtc_A           57 AKLFAMLKHPNIIALRGVCLKE--------PNLCLVMEFARGGPLNRVLSGK---------------------RIPPDIL  107 (271)
T ss_dssp             HHHHHHCCCTTBCCEEEEECCC----------CEEEEECCTTEEHHHHHTSS---------------------CCCHHHH
T ss_pred             HHHHHhcCCCCEeeEEEEEecC--------CceEEEEEcCCCCCHHHHhhcC---------------------CCCHHHH
Confidence            2345667899999999998753        3589999999999999998643                     4788999


Q ss_pred             HHHHHHHHHHHHHHHHcC---CeeccCCCCcEEEcc--------CCcEEEeeccccccccCCCccCCCcccCCCCcCCcc
Q 039267          293 KQILRQIITSLKKIHDTG---IVHRDVKPANLVLTK--------RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPE  361 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~---IiHrDlKp~NILl~~--------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE  361 (502)
                      +.++.|++.||+|||+++   |+||||||+|||++.        ++.+||+|||+++......   .....||+.|+|||
T Consensus       108 ~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE  184 (271)
T 3dtc_A          108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT---KMSAAGAYAWMAPE  184 (271)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------CCGGGSCHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc---ccCCCCccceeCHH
Confidence            999999999999999998   999999999999986        7789999999998755432   23457899999999


Q ss_pred             cccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhcc
Q 039267          362 LYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLR  441 (502)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (502)
                      ++.+..                      ++.++||||||++++||++|..|+...........            .....
T Consensus       185 ~~~~~~----------------------~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~------------~~~~~  230 (271)
T 3dtc_A          185 VIRASM----------------------FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG------------VAMNK  230 (271)
T ss_dssp             HHHHCC----------------------CSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH------------HHTSC
T ss_pred             HhccCC----------------------CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHh------------hhcCC
Confidence            987533                      44567999999999999999988765432222111            11111


Q ss_pred             CccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          442 SDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       442 ~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ........+++++.+++.+||+   .||.+|||++|+++|
T Consensus       231 ~~~~~~~~~~~~~~~li~~~l~---~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          231 LALPIPSTCPEPFAKLMEDCWN---PDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCCCCcccCHHHHHHHHHHhc---CCcccCcCHHHHHHH
Confidence            2233445678999999999999   777999999999875


No 189
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2e-41  Score=343.05  Aligned_cols=277  Identities=16%  Similarity=0.166  Sum_probs=194.6

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEec-----CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccch
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVP-----KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFG  206 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~  206 (502)
                      .++..++|.+.+.||+|+||.||+|++..     +++.||+|+++...                         . .....
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------------------------~-~~~~~   95 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------------------------S-ADMQA   95 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-------------------------C-HHHHH
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-------------------------C-HHHHH
Confidence            45778899999999999999999999863     33566666654311                         0 01111


Q ss_pred             hhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCc----chhhhccccccCC
Q 039267          207 DYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFN----LETYMFGRVLEGE  282 (502)
Q Consensus       207 ~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~----~~~~~~~~~~~~~  282 (502)
                      .+ ..+...+..+.||||+++++++...        +..++||||+++|+|.+++........    .............
T Consensus        96 ~~-~~E~~~l~~l~hp~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T 1luf_A           96 DF-QREAALMAEFDNPNIVKLLGVCAVG--------KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP  166 (343)
T ss_dssp             HH-HHHHHHHHTCCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHHTCC--------------------
T ss_pred             HH-HHHHHHHHhCCCCCEEEEEEEEccC--------CceEEEEecCCCCcHHHHHHHhCccccccccccccccccccccc
Confidence            11 1222346667899999999998653        359999999999999999987531100    0000000000111


Q ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcc
Q 039267          283 DSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPE  361 (502)
Q Consensus       283 ~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE  361 (502)
                      ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||
T Consensus       167 ~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE  246 (343)
T 1luf_A          167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE  246 (343)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChh
Confidence            2246899999999999999999999999999999999999999999999999999876543322 234456799999999


Q ss_pred             cccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhc
Q 039267          362 LYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRL  440 (502)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (502)
                      ++.+..                      ++.++||||||+++|||++ |..|+..............             
T Consensus       247 ~~~~~~----------------------~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-------------  291 (343)
T 1luf_A          247 SIFYNR----------------------YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD-------------  291 (343)
T ss_dssp             HHHHCC----------------------CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-------------
T ss_pred             hhccCC----------------------cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhC-------------
Confidence            987533                      4457799999999999999 8888754432211111000             


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ......+..++.++.+|+.+||+   .||++|||+++++++
T Consensus       292 ~~~~~~~~~~~~~l~~li~~~l~---~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          292 GNILACPENCPLELYNLMRLCWS---KLPADRPSFCSIHRI  329 (343)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcc---cCcccCCCHHHHHHH
Confidence            11122345678999999999999   777999999999864


No 190
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=2.4e-41  Score=357.09  Aligned_cols=262  Identities=18%  Similarity=0.188  Sum_probs=191.8

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|++..++|.+.+.||+|+||.||+|++. .+..||||+++....                         ..+.+    
T Consensus       177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------------------------~~~~~----  226 (452)
T 1fmk_A          177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-------------------------SPEAF----  226 (452)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS-------------------------CHHHH----
T ss_pred             cccccChhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCC-------------------------CHHHH----
Confidence            467899999999999999999999999974 345677777664211                         00111    


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      ..+...+..+.||||+++++++..         +..+|||||+++|+|.+++....                  ...+++
T Consensus       227 ~~E~~~l~~l~hp~iv~~~~~~~~---------~~~~iv~e~~~~gsL~~~l~~~~------------------~~~~~~  279 (452)
T 1fmk_A          227 LQEAQVMKKLRHEKLVQLYAVVSE---------EPIYIVTEYMSKGSLLDFLKGET------------------GKYLRL  279 (452)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEECS---------SSCEEEECCCTTCBHHHHHSHHH------------------HTTCCH
T ss_pred             HHHHHHHHhCCCCCEeeEEEEEcC---------CceEEEehhhcCCCHHHHHHhcC------------------CCCCCH
Confidence            111223556679999999998753         24899999999999999997532                  124788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++....  
T Consensus       280 ~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  357 (452)
T 1fmk_A          280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--  357 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCC--
Confidence            999999999999999999999999999999999999999999999999876544333334456788999999987543  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++|||||||++|||++ |..|+..............+             ...+.+.
T Consensus       358 --------------------~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-------------~~~~~~~  404 (452)
T 1fmk_A          358 --------------------FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-------------YRMPCPP  404 (452)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-------------CCCCCCT
T ss_pred             --------------------CCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------CCCCCCC
Confidence                                4457799999999999999 88776543322111111111             1223445


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC--Ccccc
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRH--PYFLL  486 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H--P~f~~  486 (502)
                      .+++++.+||.+||+   .||++|||++++++.  .+|..
T Consensus       405 ~~~~~l~~li~~cl~---~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          405 ECPESLHDLMCQCWR---KEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             TSCHHHHHHHHHHTC---SSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CCCHHHHHHHHHHcc---CChhhCcCHHHHHHHHHHHhcc
Confidence            679999999999999   777999999999873  55543


No 191
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=7.7e-41  Score=353.08  Aligned_cols=252  Identities=16%  Similarity=0.215  Sum_probs=193.2

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|++..++|.+.+.||+|+||.||+|.+  +|+.||||+++....      .+.+..|.                    
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~~------~~~~~~E~--------------------  237 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT------AQAFLAEA--------------------  237 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCTT------SHHHHHHH--------------------
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCchH------HHHHHHHH--------------------
Confidence            35778999999999999999999999986  477888888764210      01111121                    


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                          ..+..+.||||+++++++....       +..++||||+++|+|.+++...+.                  ..+++
T Consensus       238 ----~~l~~l~h~niv~~~~~~~~~~-------~~~~iv~e~~~~g~L~~~l~~~~~------------------~~~~~  288 (450)
T 1k9a_A          238 ----SVMTQLRHSNLVQLLGVIVEEK-------GGLYIVTEYMAKGSLVDYLRSRGR------------------SVLGG  288 (450)
T ss_dssp             ----HHHHTCCCTTBCCEEEEEECTT-------SCEEEEEECCTTCBHHHHHHHHCT------------------TTCCH
T ss_pred             ----HHHHhccCCCEEEEEEEEEcCC-------CceEEEEEecCCCcHHHHHHhcCC------------------CCCCH
Confidence                2355667999999999986542       359999999999999999987641                  23688


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.....    .....+|+.|+|||++.+..  
T Consensus       289 ~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~~~~~y~aPE~~~~~~--  362 (450)
T 1k9a_A          289 DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKK--  362 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----------CCCTTTSCHHHHHSSC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----ccCCCCCcceeCHHHhcCCC--
Confidence            899999999999999999999999999999999999999999999999864322    22346789999999997643  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++|||||||++|||++ |..|+..............+             .....++
T Consensus       363 --------------------~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-------------~~~~~p~  409 (450)
T 1k9a_A          363 --------------------FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-------------YKMDAPD  409 (450)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT-------------CCCCCCT
T ss_pred             --------------------CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------CCCCCCC
Confidence                                4457799999999999998 88876543322111111111             1233456


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      .+++++.+||.+||+   .||.+|||++++++
T Consensus       410 ~~~~~l~~li~~cl~---~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          410 GCPPAVYDVMKNCWH---LDAATRPTFLQLRE  438 (450)
T ss_dssp             TCCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHcC---CChhHCcCHHHHHH
Confidence            689999999999999   77799999999875


No 192
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.2e-40  Score=329.21  Aligned_cols=258  Identities=17%  Similarity=0.215  Sum_probs=192.1

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      ++..++|.+.+.||+|+||+||+|++..++..++++                  ...+++|.+.....   ........+
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~------------------~~~va~K~~~~~~~---~~~~~~~~E   62 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLH------------------ETEVLLKVLDKAHR---NYSESFFEA   62 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEE------------------EEEEEEEEECGGGG---GGHHHHHHH
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEeccccccccc------------------chhhhhhhcccccH---HHHHHHHHH
Confidence            467789999999999999999999988776432221                  23344554432111   111111222


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++...        +..++||||+++|+|.+++...+                   ..+++..+
T Consensus        63 ~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~~~  115 (289)
T 4fvq_A           63 ASMMSKLSHKHLVLNYGVCVCG--------DENILVQEFVKFGSLDTYLKKNK-------------------NCINILWK  115 (289)
T ss_dssp             HHHHHTSCCTTBCCEEEEECCT--------TCCEEEEECCTTCBHHHHHHHTG-------------------GGCCHHHH
T ss_pred             HHHHHhCCCCCEeEEEEEEEeC--------CCCEEEEECCCCCCHHHHHHhCC-------------------CCCCHHHH
Confidence            2346677899999999998763        35899999999999999998753                   24788999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc--------EEEeeccccccccCCCccCCCcccCCCCcCCccccc
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ--------IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYV  364 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~--------~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~  364 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.        +||+|||+++.....     ....+|+.|+|||++.
T Consensus       116 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~  190 (289)
T 4fvq_A          116 LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-----DILQERIPWVPPECIE  190 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-----cccCCcCcccCHHHhC
Confidence            999999999999999999999999999999999887        999999999765322     2345789999999987


Q ss_pred             CCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcc
Q 039267          365 LPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDF  444 (502)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (502)
                      +.                     ..++.++|||||||++|||++|..|+..............              ...
T Consensus       191 ~~---------------------~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~--------------~~~  235 (289)
T 4fvq_A          191 NP---------------------KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE--------------DRH  235 (289)
T ss_dssp             CG---------------------GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH--------------TTC
T ss_pred             CC---------------------CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh--------------ccC
Confidence            51                     2345678999999999999997665554443322211100              111


Q ss_pred             ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          445 TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       445 ~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..+...+.++.+|+.+||+   .||++|||++++++|
T Consensus       236 ~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          236 QLPAPKAAELANLINNCMD---YEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CCCCCSSCTTHHHHHHHSC---SSGGGSCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcC---CChhHCcCHHHHHHH
Confidence            2334457889999999999   777999999999987


No 193
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=2.8e-41  Score=337.31  Aligned_cols=275  Identities=18%  Similarity=0.192  Sum_probs=196.4

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEe-----cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIV-----PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF  205 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~  205 (502)
                      .+++..++|.+.+.||+|+||.||+|++.     .+++.||+|+++...                         . ....
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------------------------~-~~~~   70 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-------------------------H-LTER   70 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------------------------C-HHHH
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-------------------------h-HHHH
Confidence            57788899999999999999999999863     344556666554321                         1 0011


Q ss_pred             hhhHHHHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCc
Q 039267          206 GDYEEWFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDS  284 (502)
Q Consensus       206 ~~~~~~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~  284 (502)
                      ..+.++. ..+..+ .||||+++++++...        +..++||||+++|+|.+++...+........  .........
T Consensus        71 ~~~~~E~-~~l~~l~~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~--~~~~~~~~~  139 (313)
T 1t46_A           71 EALMSEL-KVLSYLGNHMNIVNLLGACTIG--------GPTLVITEYCCYGDLLNFLRRKRDSFICSKT--SPAIMEDDE  139 (313)
T ss_dssp             HHHHHHH-HHHHHHCCCTTBCCEEEEECSS--------SSCEEEEECCTTEEHHHHHHHTTTTC----------------
T ss_pred             HHHHHHH-HHHhhcccCCCeeeEEEEEecC--------CCcEEEEecCCCCCHHHHHHhcccccccccc--ccccccccc
Confidence            1122222 234455 799999999998653        3589999999999999999876421100000  000001122


Q ss_pred             cccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccc
Q 039267          285 TKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELY  363 (502)
Q Consensus       285 ~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~  363 (502)
                      ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++
T Consensus       140 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  219 (313)
T 1t46_A          140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI  219 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHh
Confidence            35899999999999999999999999999999999999999999999999999877654332 23455678899999998


Q ss_pred             cCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchh--hHHHHHhhccChHHHHHhhhc
Q 039267          364 VLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKN--FNMEIKTAQYDLNKWREYTRL  440 (502)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  440 (502)
                      .+..                      ++.++||||||+++|||++ |..|+......  .......              
T Consensus       220 ~~~~----------------------~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~--------------  263 (313)
T 1t46_A          220 FNCV----------------------YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE--------------  263 (313)
T ss_dssp             HHCC----------------------CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHH--------------
T ss_pred             cCCC----------------------CChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhcc--------------
Confidence            7533                      4467799999999999999 88776543322  1111111              


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..........+.++.+|+.+||+   .||.+|||+++++++
T Consensus       264 ~~~~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~ell~~  301 (313)
T 1t46_A          264 GFRMLSPEHAPAEMYDIMKTCWD---ADPLKRPTFKQIVQL  301 (313)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHcC---CCchhCcCHHHHHHH
Confidence            01122334578999999999999   777999999999875


No 194
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1e-40  Score=337.07  Aligned_cols=285  Identities=16%  Similarity=0.175  Sum_probs=194.4

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+..++|.+.+.||+|+||+||+|+.  +++.||||++.....                             .....+.
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----------------------------~~~~~e~   56 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR-----------------------------QNFINEK   56 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH-----------------------------HHHHHHH
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch-----------------------------hhHHHHH
Confidence            457778999999999999999999975  678888888764211                             0111122


Q ss_pred             HHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHH
Q 039267          212 FNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALI  291 (502)
Q Consensus       212 ~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (502)
                      ....+..+.|+||+++++.+......   .....++||||+++|+|.+++....                     .++..
T Consensus        57 ~~~~~~~~~h~~i~~~~~~~~~~~~~---~~~~~~lv~e~~~~g~L~~~l~~~~---------------------~~~~~  112 (336)
T 3g2f_A           57 NIYRVPLMEHDNIARFIVGDERVTAD---GRMEYLLVMEYYPNGSLXKYLSLHT---------------------SDWVS  112 (336)
T ss_dssp             HHHTSTTCCCTTBCCEEEEEEEECTT---SCEEEEEEECCCTTCBHHHHHHHCC---------------------BCHHH
T ss_pred             HHHHHHhccCcchhhheecccccccC---CCceEEEEEecCCCCcHHHHHhhcc---------------------cchhH
Confidence            22345567899999999865432211   1235789999999999999998653                     47888


Q ss_pred             HHHHHHHHHHHHHHHHHc---------CCeeccCCCCcEEEccCCcEEEeeccccccccCCCc-------cCCCcccCCC
Q 039267          292 IKQILRQIITSLKKIHDT---------GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN-------YVPNRTLLDP  355 (502)
Q Consensus       292 ~~~i~~qia~gL~yLH~~---------~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~-------~~~~~~~gt~  355 (502)
                      +..++.||+.||+|||+.         +|+||||||+|||++.++.+||+|||+++.......       .......||+
T Consensus       113 ~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~  192 (336)
T 3g2f_A          113 SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI  192 (336)
T ss_dssp             HHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCG
T ss_pred             HHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCcc
Confidence            999999999999999999         999999999999999999999999999987654321       1223457999


Q ss_pred             CcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhh--HHHH---HhhccC
Q 039267          356 DYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNF--NMEI---KTAQYD  430 (502)
Q Consensus       356 ~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~--~~~~---~~~~~~  430 (502)
                      .|+|||++.+......               ...++.++|||||||++|||++|..|+.......  ....   ......
T Consensus       193 ~y~aPE~~~~~~~~~~---------------~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~  257 (336)
T 3g2f_A          193 RYMAPEVLEGAVNLRD---------------XESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPT  257 (336)
T ss_dssp             GGCCHHHHTTCCCGGG---------------HHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCC
T ss_pred             ceeCchhhcCCccccc---------------ccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCch
Confidence            9999999975321110               1233457899999999999999866654332210  0000   001111


Q ss_pred             hHHHHHhhhc-cCccccc------cCCchHHHHHHHHhhhccCCCCCCCcCHHHH------hcCCccccCCC
Q 039267          431 LNKWREYTRL-RSDFTIL------DLDSGRGWDLATKLISERGFLRRGRLSAAAA------LRHPYFLLGGD  489 (502)
Q Consensus       431 ~~~~~~~~~~-~~~~~~~------~~~s~~~~~Li~~~L~~~~~dP~~Rps~~ev------l~HP~f~~~~~  489 (502)
                      ...+...... ......+      ...+.++.+||.+||+   .||++|||++|+      +.++|-++...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~---~dP~~Rps~~e~l~~L~~ll~~~~~~~~~  326 (336)
T 3g2f_A          258 FEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD---QDAEARLTAQXAEERMAELMMIWERNKSV  326 (336)
T ss_dssp             HHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSC---SSGGGSCCHHHHHHHHHHHHHCCCC----
T ss_pred             HHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhc---CChhhCcchHHHHHHHHHHHHHHHhcccC
Confidence            1111111111 1111111      1234579999999999   777999999999      55788775543


No 195
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=8.7e-41  Score=337.82  Aligned_cols=259  Identities=17%  Similarity=0.187  Sum_probs=188.7

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||+||+|++..+++.+|+|+                     ++|.++.... ... ......+.
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv---------------------~iK~~~~~~~-~~~-~~~~~~E~   68 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV---------------------AIKELREATS-PKA-NKEILDEA   68 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEE---------------------EEEEECCCSS-CCC-HHHHHHHH
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEE---------------------EEEeeccccC-HHH-HHHHHHHH
Confidence            567889999999999999999999988888776543                     2333321111 011 11111222


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++...         ..++|++|+++|+|.+++...+                   ..+++..++
T Consensus        69 ~~l~~l~hp~iv~~~~~~~~~---------~~~~v~~~~~~g~L~~~l~~~~-------------------~~~~~~~~~  120 (327)
T 3lzb_A           69 YVMASVDNPHVCRLLGICLTS---------TVQLITQLMPFGCLLDYVREHK-------------------DNIGSQYLL  120 (327)
T ss_dssp             HHHTTCCBTTBCCCCEEEESS---------SEEEEECCCSSCBHHHHHHHTT-------------------TCCCHHHHH
T ss_pred             HHHHhCCCCCeeEEEEEEecC---------CceEEEEecCCCcHHHHHHhcC-------------------CCCCHHHHH
Confidence            346677899999999998643         4889999999999999998753                   257889999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc-cCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN-YVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+..     
T Consensus       121 ~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-----  195 (327)
T 3lzb_A          121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-----  195 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCC-----
T ss_pred             HHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCC-----
Confidence            9999999999999999999999999999999999999999999987654332 2233455788999999997543     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                       ++.++|||||||++|||++ |..|+.............             ...........+
T Consensus       196 -----------------~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-------------~~~~~~~~~~~~  245 (327)
T 3lzb_A          196 -----------------YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-------------KGERLPQPPICT  245 (327)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-------------TTCCCCCCTTBC
T ss_pred             -----------------CChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-------------cCCCCCCCccCC
Confidence                             4457799999999999999 888875443322211111             112223445578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .++.+|+.+||+   .||.+|||++|+++.
T Consensus       246 ~~l~~li~~~l~---~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          246 IDVYMIMRKCWM---IDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcC---CChhHCcCHHHHHHH
Confidence            999999999999   777999999999863


No 196
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=7.8e-41  Score=337.99  Aligned_cols=255  Identities=15%  Similarity=0.079  Sum_probs=190.1

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.+.||+|+||.||+|+...+|+.||||++......      ..+..|..                        
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~E~~------------------------   56 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA------PQLHLEYR------------------------   56 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS------CCHHHHHH------------------------
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch------HHHHHHHH------------------------
Confidence            446899999999999999999999889999999987653210      11111222                        


Q ss_pred             Hhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          215 RLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       215 ~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      .+..+ .|+||+++++++...        +..++||||+ +++|.+++...+                   ..+++..++
T Consensus        57 ~l~~l~~h~~i~~~~~~~~~~--------~~~~lv~e~~-~~~L~~~~~~~~-------------------~~~~~~~~~  108 (330)
T 2izr_A           57 FYKQLGSGDGIPQVYYFGPCG--------KYNAMVLELL-GPSLEDLFDLCD-------------------RTFSLKTVL  108 (330)
T ss_dssp             HHHHHCSCTTSCCEEEEEEET--------TEEEEEEECC-CCBHHHHHHHTT-------------------TCCCHHHHH
T ss_pred             HHHHhhCCCCCCEEEEEEecC--------CccEEEEEeC-CCCHHHHHHHcC-------------------CCCCHHHHH
Confidence            23334 799999999988763        3589999999 999999998642                   258899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCc-----EEEeeccccccccCCCcc------CCCcccCCCCcCCccc
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ-----IKLIDFGAATDLRIGKNY------VPNRTLLDPDYCPPEL  362 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~-----~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~  362 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.     +||+|||+++........      ......||+.|+|||+
T Consensus       109 ~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  188 (330)
T 2izr_A          109 MIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINT  188 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHH
Confidence            99999999999999999999999999999998887     999999999976543321      1245679999999999


Q ss_pred             ccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh-hHHHHHhhccChHHHHHhhhcc
Q 039267          363 YVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN-FNMEIKTAQYDLNKWREYTRLR  441 (502)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  441 (502)
                      +.+..                      ++.++|||||||++|||++|..|+...... ..........       .....
T Consensus       189 ~~~~~----------------------~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~-------~~~~~  239 (330)
T 2izr_A          189 HLGKE----------------------QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD-------TKRAT  239 (330)
T ss_dssp             HTTCC----------------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH-------HHHHS
T ss_pred             HcCCC----------------------CCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh-------hhccC
Confidence            97643                      345679999999999999999987653321 1111111100       00000


Q ss_pred             CccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          442 SDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       442 ~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      +........+ ++.+++..||+   .||.+||+++++++
T Consensus       240 ~~~~~~~~~p-~~~~li~~~l~---~~p~~RP~~~~l~~  274 (330)
T 2izr_A          240 PIEVLCENFP-EMATYLRYVRR---LDFFEKPDYDYLRK  274 (330)
T ss_dssp             CHHHHTTTCH-HHHHHHHHHHH---CCTTCCCCHHHHHH
T ss_pred             CHHHHhccCh-HHHHHHHHHHh---CCCCCCCCHHHHHH
Confidence            0000112234 89999999999   77799999998876


No 197
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=6e-41  Score=330.56  Aligned_cols=257  Identities=16%  Similarity=0.197  Sum_probs=189.1

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCC---ceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKN---AVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~---~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      +.+..++|.+.+.||+|+||+||+|++...+   ..||+|.+.....                          ......+
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~   60 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT--------------------------LDNKEKF   60 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC--------------------------HHHHHHH
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC--------------------------chHHHHH
Confidence            4577789999999999999999999876432   2466665543210                          0001111


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      . .....+..+.||||+++++++..         +..++||||+++++|.+++...+                   ..++
T Consensus        61 ~-~E~~~l~~l~h~~i~~~~~~~~~---------~~~~~v~e~~~~~~L~~~l~~~~-------------------~~~~  111 (281)
T 3cc6_A           61 M-SEAVIMKNLDHPHIVKLIGIIEE---------EPTWIIMELYPYGELGHYLERNK-------------------NSLK  111 (281)
T ss_dssp             H-HHHHHHHHHCCTTBCCEEEEECS---------SSCEEEEECCTTCBHHHHHHHHT-------------------TTCC
T ss_pred             H-HHHHHHHhCCCCCcceEEEEEcC---------CCCEEEEecCCCCCHHHHHHhcc-------------------ccCC
Confidence            1 12223556689999999998753         24799999999999999998653                   2478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      +..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++.+.. 
T Consensus       112 ~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-  190 (281)
T 3cc6_A          112 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR-  190 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCC-
Confidence            8999999999999999999999999999999999999999999999999877654443444556788999999986533 


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTIL  447 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                                           ++.++||||||+++|||++ |..|+......-.......             ......+
T Consensus       191 ---------------------~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~-------------~~~~~~~  236 (281)
T 3cc6_A          191 ---------------------FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK-------------GDRLPKP  236 (281)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH-------------TCCCCCC
T ss_pred             ---------------------CCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc-------------CCCCCCC
Confidence                                 4456799999999999998 8888754332221111110             1112234


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ...++.+.+++.+||+   .||++|||+++++++
T Consensus       237 ~~~~~~l~~li~~~l~---~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          237 DLCPPVLYTLMTRCWD---YDPSDRPRFTELVCS  267 (281)
T ss_dssp             TTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcc---CCchhCcCHHHHHHH
Confidence            4578999999999999   777999999999875


No 198
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=2.3e-41  Score=348.52  Aligned_cols=257  Identities=18%  Similarity=0.202  Sum_probs=180.3

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEe---cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIV---PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~---~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      .++..++|.+.+.||+|+||.||+|++.   .++..||||.++....                          ......+
T Consensus        40 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~--------------------------~~~~~~~   93 (373)
T 2qol_A           40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--------------------------EKQRRDF   93 (373)
T ss_dssp             CBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC--------------------------HHHHHHH
T ss_pred             hhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC--------------------------HHHHHHH
Confidence            4577789999999999999999999876   3455677766653210                          0011111


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      . .+...+..+.||||+++++++...        +..++||||+++|+|.+++...+                   ..++
T Consensus        94 ~-~E~~~l~~l~h~niv~~~~~~~~~--------~~~~lv~e~~~~~sL~~~l~~~~-------------------~~~~  145 (373)
T 2qol_A           94 L-GEASIMGQFDHPNIIRLEGVVTKS--------KPVMIVTEYMENGSLDSFLRKHD-------------------AQFT  145 (373)
T ss_dssp             H-HHHHHHTTCCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHTTT-------------------TCSC
T ss_pred             H-HHHHHHHhCCCCCCCeEEEEEeeC--------CceEEEEeCCCCCcHHHHHHhCC-------------------CCCC
Confidence            1 122346667899999999998653        35999999999999999998653                   2578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........  ......+|+.|+|||++.+.
T Consensus       146 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  225 (373)
T 2qol_A          146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR  225 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccC
Confidence            9999999999999999999999999999999999999999999999999876543221  22233467899999998754


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      .                      ++.++|||||||++|||++ |..|+..............+             ...+
T Consensus       226 ~----------------------~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~-------------~~~~  270 (373)
T 2qol_A          226 K----------------------FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-------------YRLP  270 (373)
T ss_dssp             C----------------------CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT-------------EECC
T ss_pred             C----------------------cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------CCCC
Confidence            3                      4457799999999999998 88887544322111111110             1122


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ....++.++.+|+.+||+   .||++|||++++++
T Consensus       271 ~~~~~~~~l~~li~~cl~---~dp~~RPs~~~i~~  302 (373)
T 2qol_A          271 PPMDCPAALYQLMLDCWQ---KDRNNRPKFEQIVS  302 (373)
T ss_dssp             CCTTCBHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             CCccccHHHHHHHHHHhC---cChhhCcCHHHHHH
Confidence            334578999999999999   77799999999875


No 199
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=5.9e-41  Score=352.13  Aligned_cols=262  Identities=20%  Similarity=0.245  Sum_probs=182.0

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      ..+...+|.+.+.||+|+||+||.. ...+|+.||||++.....       .....|.                      
T Consensus        19 ~~i~~~~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~~-------~~~~~E~----------------------   68 (432)
T 3p23_A           19 VIVGKISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPECF-------SFADREV----------------------   68 (432)
T ss_dssp             EEETTEEEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTTE-------EECHHHH----------------------
T ss_pred             EEEccEEEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHHH-------HHHHHHH----------------------
Confidence            3456667999999999999986543 336788899988764211       0011111                      


Q ss_pred             HHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          212 FNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       212 ~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                        ..+..+ .||||+++++++...        +..+|||||++ |+|.+++.....                   .+.+.
T Consensus        69 --~~l~~l~~HpnIv~l~~~~~~~--------~~~~lv~E~~~-g~L~~~l~~~~~-------------------~~~~~  118 (432)
T 3p23_A           69 --QLLRESDEHPNVIRYFCTEKDR--------QFQYIAIELCA-ATLQEYVEQKDF-------------------AHLGL  118 (432)
T ss_dssp             --HHHHHSCCCTTBCCEEEEEEET--------TEEEEEEECCS-EEHHHHHHSSSC-------------------CCCSS
T ss_pred             --HHHHhccCCCCcCeEEEEEecC--------CEEEEEEECCC-CCHHHHHHhcCC-------------------Cccch
Confidence              123333 699999999987653        35899999995 799999987642                   12333


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-----CCcEEEeeccccccccCCCc--cCCCcccCCCCcCCcccc
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTK-----RGQIKLIDFGAATDLRIGKN--YVPNRTLLDPDYCPPELY  363 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~-----~~~~kL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~  363 (502)
                      .+..++.||+.||+|||+++|+||||||+|||++.     +..+||+|||+|+.......  .......||+.|+|||++
T Consensus       119 ~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l  198 (432)
T 3p23_A          119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML  198 (432)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhh
Confidence            45789999999999999999999999999999953     33688999999987754422  233456799999999999


Q ss_pred             cCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccC
Q 039267          364 VLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRS  442 (502)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (502)
                      .+...                   ..++.++|||||||++|||++ |..|+............ .....          .
T Consensus       199 ~~~~~-------------------~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~-~~~~~----------~  248 (432)
T 3p23_A          199 SEDCK-------------------ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL-GACSL----------D  248 (432)
T ss_dssp             SCC----------------------CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHT-TCCCC----------T
T ss_pred             hcccc-------------------cCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHh-ccCCc----------c
Confidence            74211                   234567899999999999999 77776443332222211 11100          0


Q ss_pred             ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          443 DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       443 ~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      ........+..+.+|+.+||+   .||.+|||++++++||||..
T Consensus       249 ~~~~~~~~~~~~~~li~~~L~---~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          249 CLHPEKHEDVIARELIEKMIA---MDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             TSCTTCHHHHHHHHHHHHHSC---SSGGGSCCHHHHHTSTTTCC
T ss_pred             ccCccccccHHHHHHHHHHHh---CCHhhCCCHHHHHhCccccC
Confidence            011112235668899999999   77799999999999999975


No 200
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=7.5e-41  Score=329.28  Aligned_cols=256  Identities=15%  Similarity=0.181  Sum_probs=195.4

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|++..++|++.+.||+|+||.||+|.. .++..||+|.+.....                         ..+   .+.
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------------------~~~---~~~   56 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSM-------------------------SPD---AFL   56 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEE-TTTEEEEEEEECTTSS-------------------------CHH---HHH
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEE-cCCcEEEEEEecCCcc-------------------------cHH---HHH
Confidence            36788899999999999999999999986 4566788887754211                         000   111


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                       .+...+..+.|+||+++++++..         +..++||||+++++|.+++....                  ...+++
T Consensus        57 -~E~~~l~~l~h~~i~~~~~~~~~---------~~~~~v~e~~~~~~L~~~l~~~~------------------~~~~~~  108 (279)
T 1qpc_A           57 -AEANLMKQLQHQRLVRLYAVVTQ---------EPIYIITEYMENGSLVDFLKTPS------------------GIKLTI  108 (279)
T ss_dssp             -HHHHHHHHCCCTTBCCEEEEECS---------SSCEEEEECCTTCBHHHHTTSHH------------------HHTCCH
T ss_pred             -HHHHHHHhCCCcCcceEEEEEcC---------CCcEEEEecCCCCCHHHHHhcCC------------------CCCCCH
Confidence             11233556679999999998753         34899999999999999997542                  124789


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|+|||++.+..  
T Consensus       109 ~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  186 (279)
T 1qpc_A          109 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--  186 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCE--
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCC--
Confidence            999999999999999999999999999999999999999999999999987655433444556788999999986533  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++||||||++++||++ |..|+..............+             .......
T Consensus       187 --------------------~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-------------~~~~~~~  233 (279)
T 1qpc_A          187 --------------------FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-------------YRMVRPD  233 (279)
T ss_dssp             --------------------ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-------------CCCCCCT
T ss_pred             --------------------CCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-------------cCCCCcc
Confidence                                3456799999999999999 88776543322111110000             1122344


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ..++++.+|+.+||+   .||++|||++++++
T Consensus       234 ~~~~~l~~li~~~l~---~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          234 NCPEELYQLMRLCWK---ERPEDRPTFDYLRS  262 (279)
T ss_dssp             TCCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             cccHHHHHHHHHHhc---cChhhCCCHHHHHH
Confidence            678999999999999   77799999999886


No 201
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.1e-40  Score=331.09  Aligned_cols=264  Identities=20%  Similarity=0.236  Sum_probs=189.7

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||+||+|++  +|+.||||++.....                             .....+...
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-----------------------------~~~~~e~~~   53 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDE-----------------------------KSWFRETEL   53 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGGH-----------------------------HHHHHHHHH
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccccc-----------------------------hhhHHHHHH
Confidence            3456899999999999999999986  688888887654110                             011112222


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      .....+.||||+++++.+.....    ..+..++||||+++|+|.++++..                     .+++..+.
T Consensus        54 ~~~~~l~h~niv~~~~~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~---------------------~~~~~~~~  108 (301)
T 3q4u_A           54 YNTVMLRHENILGFIASDMTSRH----SSTQLWLITHYHEMGSLYDYLQLT---------------------TLDTVSCL  108 (301)
T ss_dssp             HHHTCCCCTTBCCEEEEEEEEET----TEEEEEEEECCCTTCBHHHHHTTC---------------------CBCHHHHH
T ss_pred             HHHhhccCcCeeeEEEeeccccC----CCceeEEehhhccCCCHHHHHhhc---------------------ccCHHHHH
Confidence            33444789999999998766432    134589999999999999999643                     47899999


Q ss_pred             HHHHHHHHHHHHHH--------HcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---CCCcccCCCCcCCccc
Q 039267          294 QILRQIITSLKKIH--------DTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCPPEL  362 (502)
Q Consensus       294 ~i~~qia~gL~yLH--------~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~  362 (502)
                      .++.||+.||+|||        +++|+||||||+|||++.++.+||+|||+++........   ......||+.|+|||+
T Consensus       109 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~  188 (301)
T 3q4u_A          109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV  188 (301)
T ss_dssp             HHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhh
Confidence            99999999999999        999999999999999999999999999999876543322   2334579999999999


Q ss_pred             ccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhC----------CCCCCCcch---hhHHHHHhhcc
Q 039267          363 YVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIP----------TLRSISGLK---NFNMEIKTAQY  429 (502)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg----------~~p~~~~~~---~~~~~~~~~~~  429 (502)
                      +.+......                ..++.++|||||||++|||++|          ..|+.....   ...........
T Consensus       189 ~~~~~~~~~----------------~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~  252 (301)
T 3q4u_A          189 LDETIQVDC----------------FDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV  252 (301)
T ss_dssp             HTTCCCTTC----------------HHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT
T ss_pred             hcCcCCCCc----------------ccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhc
Confidence            976432211                1233578999999999999998          555533211   11111111000


Q ss_pred             ChHHHHHhhhccCccc---cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          430 DLNKWREYTRLRSDFT---ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       430 ~~~~~~~~~~~~~~~~---~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                              ...++..+   ..+..+.++.+|+.+||+   .||++|||++++++
T Consensus       253 --------~~~~~~~~~~~~~~~~~~~l~~li~~cl~---~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          253 --------DQQRPNIPNRWFSDPTLTSLAKLMKECWY---QNPSARLTALRIKK  295 (301)
T ss_dssp             --------SCCCCCCCGGGGGSHHHHHHHHHHHHHCC---SSGGGSCCHHHHHH
T ss_pred             --------cCCCCCCChhhccCccHHHHHHHHHHHhh---cChhhCCCHHHHHH
Confidence                    00011111   122346789999999999   77799999999986


No 202
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=4.6e-41  Score=330.84  Aligned_cols=258  Identities=20%  Similarity=0.259  Sum_probs=196.7

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      .+|++.+.||+|+||.||+|++..+|+.||+|.+....        +...                        .....+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~------------------------~e~~~l   58 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAE------------------------REVKAL   58 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGH------------------------HHHHHH
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHH------------------------HHHHHH
Confidence            46999999999999999999998889999999886521        0111                        111235


Q ss_pred             hhcCCccccccccccccccCC--------ccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          217 SRAAPETCAEFLGSFVADKTN--------SQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~--------~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      ..+.||||+++++++......        .....+..++||||+++|+|.+++....                  ...++
T Consensus        59 ~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~  120 (284)
T 2a19_B           59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR------------------GEKLD  120 (284)
T ss_dssp             HHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGG------------------GSCCC
T ss_pred             HhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhcc------------------CCCCC
Confidence            566799999999987542110        0011345899999999999999998652                  12578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      +..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  ......||+.|+|||++.+.. 
T Consensus       121 ~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-  197 (284)
T 2a19_B          121 KVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQD-  197 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc--cccccCCcccccChhhhccCC-
Confidence            99999999999999999999999999999999999999999999999998765443  234557899999999987543 


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                           ++.++||||||+++|||++|..|+.......              .....    ....+
T Consensus       198 ---------------------~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--------------~~~~~----~~~~~  238 (284)
T 2a19_B          198 ---------------------YGKEVDLYALGLILAELLHVCDTAFETSKFF--------------TDLRD----GIISD  238 (284)
T ss_dssp             ---------------------CCTHHHHHHHHHHHHHHHSCCSSHHHHHHHH--------------HHHHT----TCCCT
T ss_pred             ---------------------CcchhhhHHHHHHHHHHHhcCCcchhHHHHH--------------HHhhc----ccccc
Confidence                                 4457799999999999999877643211111              11100    11234


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGD  489 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~  489 (502)
                      ..+.++.+|+.+||+   .||.+|||++|+++|++......
T Consensus       239 ~~~~~~~~li~~~l~---~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          239 IFDKKEKTLLQKLLS---KKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             TSCHHHHHHHHHHTC---SSGGGSCCHHHHHHHHHHHTC--
T ss_pred             cCCHHHHHHHHHHcc---CChhhCcCHHHHHHHHHHHhhCC
Confidence            468899999999999   77799999999999998775443


No 203
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=2.8e-41  Score=340.61  Aligned_cols=270  Identities=18%  Similarity=0.178  Sum_probs=199.2

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEE----ecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAI----VPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~----~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      +..++|++.+.||+|+||.||+|++    ..+++.||+|++.....                           .....+ 
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~~-   71 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP---------------------------DQQRDF-   71 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH---------------------------HHHHHH-
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH---------------------------HHHHHH-
Confidence            5667899999999999999999984    45666777776653210                           000111 


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      ..+...+..+.|+||+++++++....      .+..++||||+++++|.+++...+                   ..+++
T Consensus        72 ~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~  126 (327)
T 3lxl_A           72 QREIQILKALHSDFIVKYRGVSYGPG------RQSLRLVMEYLPSGCLRDFLQRHR-------------------ARLDA  126 (327)
T ss_dssp             HHHHHHHHTCCCTTBCCEEEEEECSS------SCEEEEEEECCTTCBHHHHHHHHG-------------------GGCCH
T ss_pred             HHHHHHHHhcCCCceeEEEEEEecCC------CceEEEEEeecCCCCHHHHHHhcc-------------------cCCCH
Confidence            12223456668999999999886432      345899999999999999998643                   25789


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLPE  367 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~  367 (502)
                      ..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++........  ......+|+.|+|||++.+..
T Consensus       127 ~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  206 (327)
T 3lxl_A          127 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI  206 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCC
Confidence            999999999999999999999999999999999999999999999999977544322  334456888999999987533


Q ss_pred             CCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccC--hHHHHHhhhccCccc
Q 039267          368 ETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYD--LNKWREYTRLRSDFT  445 (502)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  445 (502)
                                            ++.++||||||+++|||++|..|+.................  ...............
T Consensus       207 ----------------------~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (327)
T 3lxl_A          207 ----------------------FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLP  264 (327)
T ss_dssp             ----------------------EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCC
T ss_pred             ----------------------CChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCC
Confidence                                  34567999999999999999888765544332221111110  111112222223344


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ....+++++.+|+.+||+   .||++|||++++++|
T Consensus       265 ~~~~~~~~l~~li~~~l~---~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          265 APPACPAEVHELMKLCWA---PSPQDRPSFSALGPQ  297 (327)
T ss_dssp             CCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence            556789999999999999   777999999999654


No 204
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=8.5e-41  Score=338.27  Aligned_cols=273  Identities=16%  Similarity=0.215  Sum_probs=194.4

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEec-------CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVP-------KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAE  203 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~-------~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~  203 (502)
                      .|++..++|.+.+.||+|+||.||+|++..       ++..||+|+++.                         .. ...
T Consensus        29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~-------------------------~~-~~~   82 (334)
T 2pvf_A           29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-------------------------DA-TEK   82 (334)
T ss_dssp             TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCT-------------------------TC-CHH
T ss_pred             cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeecc-------------------------CC-cHH
Confidence            567888999999999999999999999752       334455555442                         11 111


Q ss_pred             cchhhHHHHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCC
Q 039267          204 EFGDYEEWFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGE  282 (502)
Q Consensus       204 ~~~~~~~~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~  282 (502)
                      ....+..+.. .+..+ .||||+++++++...        +..++||||+++|+|.+++............    .....
T Consensus        83 ~~~~~~~E~~-~l~~l~~hp~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~----~~~~~  149 (334)
T 2pvf_A           83 DLSDLVSEME-MMKMIGKHKNIINLLGACTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSY----DINRV  149 (334)
T ss_dssp             HHHHHHHHHH-HHHHHCCCTTBCCEEEEECSS--------SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC---------
T ss_pred             HHHHHHHHHH-HHHHhhcCCCEeeEEEEEccC--------CceEEEEECCCCCcHHHHHHHhccccccccc----ccccc
Confidence            1112222222 23444 799999999998653        4599999999999999999876421100000    00011


Q ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcc
Q 039267          283 DSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPE  361 (502)
Q Consensus       283 ~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE  361 (502)
                      ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||
T Consensus       150 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  229 (334)
T 2pvf_A          150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE  229 (334)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHH
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChH
Confidence            1235889999999999999999999999999999999999999999999999999876544322 234456788999999


Q ss_pred             cccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhH-HHHHhhccChHHHHHhhh
Q 039267          362 LYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFN-MEIKTAQYDLNKWREYTR  439 (502)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~  439 (502)
                      ++.+..                      ++.++||||||+++|||++ |..|+........ ..+..             
T Consensus       230 ~~~~~~----------------------~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-------------  274 (334)
T 2pvf_A          230 ALFDRV----------------------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE-------------  274 (334)
T ss_dssp             HHHHCE----------------------ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-------------
T ss_pred             HhcCCC----------------------cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhc-------------
Confidence            987533                      3456799999999999999 8877654322111 11110             


Q ss_pred             ccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          440 LRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       440 ~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                       .........++.++.+++.+||+   .||.+|||+++++++
T Consensus       275 -~~~~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          275 -GHRMDKPANCTNELYMMMRDCWH---AVPSQRPTFKQLVED  312 (334)
T ss_dssp             -TCCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             -CCCCCCCccCCHHHHHHHHHHcc---CChhhCcCHHHHHHH
Confidence             11122345678999999999999   777999999999875


No 205
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=5.3e-41  Score=339.01  Aligned_cols=271  Identities=18%  Similarity=0.203  Sum_probs=194.8

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCc-----eeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNA-----VVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF  205 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~-----~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~  205 (502)
                      .+++..++|.+.+.||+|+||.||+|++..++.     .||+|.+..                         ... ....
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~-------------------------~~~-~~~~   93 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS-------------------------TAH-ADEK   93 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECT-------------------------TCC-HHHH
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccc-------------------------ccC-hHHH
Confidence            577889999999999999999999999876554     455554433                         111 1111


Q ss_pred             hhhHHHHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCc
Q 039267          206 GDYEEWFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDS  284 (502)
Q Consensus       206 ~~~~~~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~  284 (502)
                      ..+..+. ..+..+ .||||+++++++...        +..++||||+++|+|.+++.........      ........
T Consensus        94 ~~~~~E~-~~l~~l~~h~~iv~~~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~------~~~~~~~~  158 (333)
T 2i1m_A           94 EALMSEL-KIMSHLGQHENIVNLLGACTHG--------GPVLVITEYCCYGDLLNFLRRKSRVLET------DPAFAIAN  158 (333)
T ss_dssp             HHHHHHH-HHHHHHCCCTTBCCEEEEECSS--------SSCEEEEECCTTEEHHHHHHHHHHHHSC------C-------
T ss_pred             HHHHHHH-HHHHhhcCCCCeeeEEEEEecC--------CceEEEEecCCCCcHHHHHHHhcccccc------cccccccc
Confidence            1122222 234455 799999999998653        4599999999999999999865210000      00000012


Q ss_pred             cccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccc
Q 039267          285 TKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELY  363 (502)
Q Consensus       285 ~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~  363 (502)
                      ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++
T Consensus       159 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  238 (333)
T 2i1m_A          159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI  238 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHh
Confidence            35789999999999999999999999999999999999999999999999999876544322 23455678899999998


Q ss_pred             cCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchh--hHHHHHhhccChHHHHHhhhc
Q 039267          364 VLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKN--FNMEIKTAQYDLNKWREYTRL  440 (502)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  440 (502)
                      .+..                      ++.++|||||||++|||++ |..|+......  +......              
T Consensus       239 ~~~~----------------------~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~--------------  282 (333)
T 2i1m_A          239 FDCV----------------------YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD--------------  282 (333)
T ss_dssp             HHCC----------------------CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHH--------------
T ss_pred             ccCC----------------------CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhc--------------
Confidence            7533                      4456799999999999998 77776543222  1111111              


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ......+...++++.+|+.+||+   .||.+|||+++++++
T Consensus       283 ~~~~~~~~~~~~~l~~li~~~l~---~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          283 GYQMAQPAFAPKNIYSIMQACWA---LEPTHRPTFQQICSF  320 (333)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhc---cChhhCcCHHHHHHH
Confidence            11122334468899999999999   777999999999874


No 206
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=8.5e-41  Score=340.14  Aligned_cols=274  Identities=16%  Similarity=0.109  Sum_probs=192.5

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEec---CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVP---KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      +..++|.+.+.||+|+||+||+|++..   ++..||+|++.....        ....|..+++++..         ....
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--------~~~~e~~~~~~~~~---------~~~~   96 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG--------PLFSELKFYQRVAK---------KDCI   96 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-C--------HHHHHHHHHHHHCC---------HHHH
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCc--------chHHHHHHHHHHhh---------hHHH
Confidence            455789999999999999999999976   677888888775321        11122222222210         0011


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      .....+..+.|+||+++++++.....    ..+..++||||+ +++|.+++...+                    .+++.
T Consensus        97 ~e~~~~~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~--------------------~~~~~  151 (345)
T 2v62_A           97 KKWIERKQLDYLGIPLFYGSGLTEFK----GRSYRFMVMERL-GIDLQKISGQNG--------------------TFKKS  151 (345)
T ss_dssp             HHHHHHHTCSCCCCCCEEEEEEEESS----SCEEEEEEEECE-EEEHHHHCBGGG--------------------BCCHH
T ss_pred             HHHHhhccccccCcceeecccccccC----CCcEEEEEEecc-CCCHHHHHHhcC--------------------CCCHH
Confidence            12234667789999999999877421    134699999999 999999998653                    57899


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC--cEEEeeccccccccCCCcc------CCCcccCCCCcCCccc
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG--QIKLIDFGAATDLRIGKNY------VPNRTLLDPDYCPPEL  362 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~--~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~  362 (502)
                      .++.++.||+.||+|||+++|+||||||+|||++.++  .+||+|||+++.+......      ......||+.|+|||+
T Consensus       152 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  231 (345)
T 2v62_A          152 TVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDA  231 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHH
Confidence            9999999999999999999999999999999999887  9999999999876543221      1134578999999999


Q ss_pred             ccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhh---ccChHH-HHHhh
Q 039267          363 YVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTA---QYDLNK-WREYT  438 (502)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~---~~~~~~-~~~~~  438 (502)
                      +.+..                      ++.++|||||||++|||++|..|+..............   ....+. +... 
T Consensus       232 ~~~~~----------------------~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  288 (345)
T 2v62_A          232 HKGVA----------------------LSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKW-  288 (345)
T ss_dssp             HHTCC----------------------CCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHH-
T ss_pred             hcCCC----------------------CCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhh-
Confidence            97643                      44577999999999999999999854332222111111   111111 1100 


Q ss_pred             hccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          439 RLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       439 ~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                            ......+.++.+++.+||+   .||++|||++++++.
T Consensus       289 ------~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          289 ------APSGSSCCEIAQFLVCAHS---LAYDEKPNYQALKKI  322 (345)
T ss_dssp             ------SCTTSCCHHHHHHHHHHHT---CCTTCCCCHHHHHHH
T ss_pred             ------ccccccHHHHHHHHHHHhh---cCcccCCCHHHHHHH
Confidence                  0112578899999999999   777999999998753


No 207
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.2e-40  Score=334.52  Aligned_cols=269  Identities=16%  Similarity=0.181  Sum_probs=195.2

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEec-----CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCccc
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVP-----KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEE  204 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~  204 (502)
                      ..+++..++|.+.+.||+|+||.||+|++..     +++.||+|.+...                         .... .
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-------------------------~~~~-~   71 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-------------------------ASMR-E   71 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-------------------------SCHH-H
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-------------------------cCHH-H
Confidence            4677888999999999999999999998752     3445555554421                         1100 1


Q ss_pred             chhhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCc
Q 039267          205 FGDYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDS  284 (502)
Q Consensus       205 ~~~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~  284 (502)
                      ...+. .....+..+.|+||+++++++...        +..++||||+++|+|.+++...+..          .......
T Consensus        72 ~~~~~-~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~----------~~~~~~~  132 (322)
T 1p4o_A           72 RIEFL-NEASVMKEFNCHHVVRLLGVVSQG--------QPTLVIMELMTRGDLKSYLRSLRPA----------MANNPVL  132 (322)
T ss_dssp             HHHHH-HHHHHGGGCCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHHHHHH----------HHHCTTC
T ss_pred             HHHHH-HHHHHHHhcCCCCEeeeEEEEccC--------CccEEEEEeCCCCcHHHHHHHhchh----------hccCCCC
Confidence            11111 122346667899999999998653        3589999999999999999864200          0000111


Q ss_pred             cccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccc
Q 039267          285 TKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELY  363 (502)
Q Consensus       285 ~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~  363 (502)
                      ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++
T Consensus       133 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  212 (322)
T 1p4o_A          133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL  212 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhh
Confidence            34688999999999999999999999999999999999999999999999999876543322 22344678999999998


Q ss_pred             cCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccC
Q 039267          364 VLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRS  442 (502)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (502)
                      .+..                      ++.++||||||+++|||++ |..|+..............             ..
T Consensus       213 ~~~~----------------------~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-------------~~  257 (322)
T 1p4o_A          213 KDGV----------------------FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME-------------GG  257 (322)
T ss_dssp             HHCC----------------------CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT-------------TC
T ss_pred             ccCC----------------------CCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc-------------CC
Confidence            7533                      4456799999999999999 6777644322111111000             01


Q ss_pred             ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          443 DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       443 ~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .......++.++.+|+.+||+   .||.+|||++++++|
T Consensus       258 ~~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          258 LLDKPDNCPDMLFELMRMCWQ---YNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCHHHHHHHHHHcC---CCcccCcCHHHHHHH
Confidence            122345678999999999999   777999999999987


No 208
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=9.6e-41  Score=350.73  Aligned_cols=272  Identities=18%  Similarity=0.184  Sum_probs=181.9

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .+.|...+.||+|+||+||.+. ..+|+.||||++.....       +                       ....+....
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~~-------~-----------------------~~~~E~~~l   62 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDFC-------D-----------------------IALMEIKLL   62 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGGH-------H-----------------------HHHHHHHHH
T ss_pred             hheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHHH-------H-----------------------HHHHHHHHH
Confidence            3456778899999999998653 46788888887754110       0                       011111111


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      .....||||+++++.+..        ++..+|||||+ +|+|.+++...+....             .....++..++.+
T Consensus        63 ~~l~~HpnIv~~~~~~~~--------~~~~~lv~E~~-~gsL~~~l~~~~~~~~-------------~~~~~~~~~~~~i  120 (434)
T 2rio_A           63 TESDDHPNVIRYYCSETT--------DRFLYIALELC-NLNLQDLVESKNVSDE-------------NLKLQKEYNPISL  120 (434)
T ss_dssp             HHHTTSTTBCCEEEEEEC--------SSEEEEEECCC-SEEHHHHHHTC-------------------------CCHHHH
T ss_pred             HhccCCCCcCeEEEEEec--------CCeEEEEEecC-CCCHHHHHhccCCCch-------------hhhhccchhHHHH
Confidence            222379999999988765        34699999999 5799999987642100             0011233456789


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEccC-------------CcEEEeeccccccccCCCcc---CCCcccCCCCcCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTKR-------------GQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCP  359 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~~-------------~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~a  359 (502)
                      +.||+.||+|||+++|+||||||+|||++.+             +.+||+|||+++....+...   ......||+.|+|
T Consensus       121 ~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~a  200 (434)
T 2rio_A          121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRA  200 (434)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSC
T ss_pred             HHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccC
Confidence            9999999999999999999999999999754             48999999999987654322   2234579999999


Q ss_pred             cccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhh
Q 039267          360 PELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYT  438 (502)
Q Consensus       360 PE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (502)
                      ||++.+......               ...++.++|||||||++|||++ |..|+............ ........    
T Consensus       201 PE~~~~~~~~~~---------------~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~-~~~~~~~~----  260 (434)
T 2rio_A          201 PELLEESNNLQT---------------KRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR-GIFSLDEM----  260 (434)
T ss_dssp             HHHHSCCCTTSC---------------CCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHH-TCCCCCCC----
T ss_pred             HHHhcccccccc---------------ccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhc-CCCCcccc----
Confidence            999976332111               1356788999999999999999 88887544333222211 11111000    


Q ss_pred             hccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccC
Q 039267          439 RLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLG  487 (502)
Q Consensus       439 ~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~  487 (502)
                          ........+.++.+|+.+||+   .||.+|||++++++||||...
T Consensus       261 ----~~~~~~~~~~~~~~li~~~L~---~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          261 ----KCLHDRSLIAEATDLISQMID---HDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             ----TTCCCHHHHHHHHHHHHHHTC---SSGGGSCCHHHHHTSGGGSCH
T ss_pred             ----cccccccchHHHHHHHHHHhh---CChhhCCCHHHHHhCCccCCc
Confidence                000112246789999999999   777999999999999999743


No 209
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.2e-40  Score=330.10  Aligned_cols=261  Identities=19%  Similarity=0.190  Sum_probs=182.7

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .+++..++|++.++||+|+||+||+|++.   ..||+|+++....                         .......+.+
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~-------------------------~~~~~~~~~~   69 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAP-------------------------TPQQLQAFKN   69 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSC-------------------------CHHHHHHHHH
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCC-------------------------CHHHHHHHHH
Confidence            56788999999999999999999999753   2477776654221                         1111111122


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                       +...+..+.|+||+.+++++.         .+..++||||+++++|.+++....                   ..+++.
T Consensus        70 -E~~~l~~l~h~~iv~~~~~~~---------~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~~~  120 (289)
T 3og7_A           70 -EVGVLRKTRHVNILLFMGYST---------APQLAIVTQWCEGSSLYHHLHASE-------------------TKFEMK  120 (289)
T ss_dssp             -HHHHHTTCCCTTBCCEEEEEC---------SSSCEEEEECCCEEEHHHHHTTC----------------------CCHH
T ss_pred             -HHHHHHhCCCCcEEEEEeecc---------CCccEEEEEecCCCcHHHHHhhcc-------------------CCCCHH
Confidence             223466778999999999653         235899999999999999997543                   257889


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCC-ccCCCcccCCCCcCCcccccCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGK-NYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      .+..++.|++.||+|||+.+|+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++..... 
T Consensus       121 ~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-  199 (289)
T 3og7_A          121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS-  199 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC-----
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCC-
Confidence            999999999999999999999999999999999999999999999998654322 223345678999999999863211 


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhH--HHHHhhccChHHHHHhhhccCccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFN--MEIKTAQYDLNKWREYTRLRSDFTIL  447 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                                        ..++.++||||||+++|||++|..|+........  .........          .......
T Consensus       200 ------------------~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  251 (289)
T 3og7_A          200 ------------------NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS----------PDLSKVR  251 (289)
T ss_dssp             ------------------CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC----------CCTTSSC
T ss_pred             ------------------CCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccC----------cchhhcc
Confidence                              2345678999999999999999988765433221  111111110          0111233


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ..+++++.+|+.+||+   .||++|||++++++
T Consensus       252 ~~~~~~l~~li~~~l~---~~p~~Rps~~ell~  281 (289)
T 3og7_A          252 SNCPKRMKRLMAECLK---KKRDERPSFPRILA  281 (289)
T ss_dssp             TTSCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHcc---CChhhCCCHHHHHH
Confidence            4578999999999999   77799999999985


No 210
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=9e-41  Score=360.03  Aligned_cols=261  Identities=17%  Similarity=0.189  Sum_probs=197.9

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..|++..++|++.++||+|+||.||+|++. .+..||||+++....                         ..+.   +.
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------------------------~~~~---~~  310 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-------------------------SPEA---FL  310 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS-------------------------CHHH---HH
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC-------------------------CHHH---HH
Confidence            457889999999999999999999999974 345677777764211                         0011   11


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                       .+...+..+.|+||+++++++..         +..+|||||+++|+|.+++....                  ...+++
T Consensus       311 -~E~~~l~~l~hpniv~~~~~~~~---------~~~~lv~e~~~~gsL~~~l~~~~------------------~~~l~~  362 (535)
T 2h8h_A          311 -QEAQVMKKLRHEKLVQLYAVVSE---------EPIYIVTEYMSKGSLLDFLKGET------------------GKYLRL  362 (535)
T ss_dssp             -HHHHHHHHCCCTTBCCEEEEECS---------SSCEEEECCCTTEEHHHHHSHHH------------------HTTCCH
T ss_pred             -HHHHHHHhCCCCCEeeEEEEEee---------ccceEeeehhcCCcHHHHHhhcC------------------CCCCCH
Confidence             11223556679999999998753         25899999999999999997532                  124788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..+..|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|..|+|||++....  
T Consensus       363 ~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  440 (535)
T 2h8h_A          363 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--  440 (535)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCC--
Confidence            999999999999999999999999999999999999999999999999876543322334556788999999987533  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++|||||||+||||++ |..|+..............+             .......
T Consensus       441 --------------------~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~-------------~~~~~~~  487 (535)
T 2h8h_A          441 --------------------FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-------------YRMPCPP  487 (535)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT-------------CCCCCCT
T ss_pred             --------------------CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------CCCCCCC
Confidence                                4567899999999999999 88776543321111111111             1223445


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC--Cccc
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRH--PYFL  485 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H--P~f~  485 (502)
                      .+++++.+||.+||+   .||++|||+++|++.  .+|.
T Consensus       488 ~~~~~l~~li~~cl~---~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          488 ECPESLHDLMCQCWR---KEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             TCCHHHHHHHHHHTC---SSGGGSCCHHHHHHHHHTSSC
T ss_pred             CCCHHHHHHHHHHcC---CChhHCcCHHHHHHHHHHHhh
Confidence            678999999999999   777999999999874  5554


No 211
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.1e-39  Score=323.44  Aligned_cols=258  Identities=16%  Similarity=0.118  Sum_probs=185.9

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||.||+|++..+++.||+|++.....                         ...........+.
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~~~~~e~   85 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-------------------------SDPVFRTRMQREA   85 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-------------------------GSHHHHHHHHHHH
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-------------------------cCHHHHHHHHHHH
Confidence            345689999999999999999999988888888888764211                         0111111111222


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..+        +..++||||+++++|.+++...+                    .+++..++
T Consensus        86 ~~l~~l~hp~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~  137 (309)
T 2h34_A           86 RTAGRLQEPHVVPIHDFGEID--------GQLYVDMRLINGVDLAAMLRRQG--------------------PLAPPRAV  137 (309)
T ss_dssp             HHHTTCCCTTBCCEEEEEEET--------TEEEEEEECCCCEEHHHHHHHHC--------------------SCCHHHHH
T ss_pred             HHHhhcCCCCeeEEEEEEeeC--------CeEEEEEEecCCCCHHHHHHhcC--------------------CCCHHHHH
Confidence            346677899999999998763        36999999999999999998754                    57899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..............||+.|+|||++.+..+     
T Consensus       138 ~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-----  212 (309)
T 2h34_A          138 AIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHA-----  212 (309)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC--------
T ss_pred             HHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCC-----
Confidence            999999999999999999999999999999999999999999998765543333445678999999999976443     


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchH
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGR  453 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  453 (502)
                                       +.++||||||+++|||++|..|+................           ..........+.+
T Consensus       213 -----------------~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~  264 (309)
T 2h34_A          213 -----------------TYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAI-----------PRPSTVRPGIPVA  264 (309)
T ss_dssp             ------------------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCC-----------CCGGGTSTTCCTH
T ss_pred             -----------------CchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCC-----------CCccccCCCCCHH
Confidence                             345699999999999999999876554332111111110           1111234567899


Q ss_pred             HHHHHHHhhhccCCCCCCCc-CHHHHhc
Q 039267          454 GWDLATKLISERGFLRRGRL-SAAAALR  480 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rp-s~~evl~  480 (502)
                      +.+++.+||+   .||++|| |++++++
T Consensus       265 l~~li~~~l~---~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          265 FDAVIARGMA---KNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHHHHHTC---SSGGGSCSSHHHHHH
T ss_pred             HHHHHHHhcc---CCHHHHHHhHHHHHH
Confidence            9999999999   7779999 7887775


No 212
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=2.7e-40  Score=327.27  Aligned_cols=253  Identities=17%  Similarity=0.120  Sum_probs=187.4

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||+||+|++..+++.||+|++......      .....                        ....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~------------------------e~~~   57 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHI------------------------ESKI   57 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------CCHHH------------------------HHHH
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------hHHHH------------------------HHHH
Confidence            35799999999999999999999889999999976542210      00111                        1122


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|++++..++.+...       .+..++||||+ +++|.+++....                   ..+++..++.+
T Consensus        58 l~~l~~~~~i~~~~~~~~~-------~~~~~lv~e~~-~~~L~~~~~~~~-------------------~~~~~~~~~~i  110 (296)
T 4hgt_A           58 YKMMQGGVGIPTIRWCGAE-------GDYNVMVMELL-GPSLEDLFNFCS-------------------RKFSLKTVLLL  110 (296)
T ss_dssp             HHHHTTSTTCCCEEEEEEE-------TTEEEEEEECC-CCBHHHHHHHTT-------------------SCCCHHHHHHH
T ss_pred             HHHhcCCCCCCeeeeecCC-------CCceEEEEEcc-CCCHHHHHHHhc-------------------CCCCHHHHHHH
Confidence            4455677777777766543       34689999999 999999998543                   25789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeccccccccCCCc------cCCCcccCCCCcCCcccccCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVL---TKRGQIKLIDFGAATDLRIGKN------YVPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl---~~~~~~kL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+++.......      .......||+.|+|||++.+.
T Consensus       111 ~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  190 (296)
T 4hgt_A          111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI  190 (296)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCC
Confidence            9999999999999999999999999999   7899999999999997755432      123456789999999999764


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh----hHHHHHhhccChHHHHHhhhccC
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN----FNMEIKTAQYDLNKWREYTRLRS  442 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  442 (502)
                      .                      ++.++|||||||++|||++|..|+......    ..........          ..+
T Consensus       191 ~----------------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------~~~  238 (296)
T 4hgt_A          191 E----------------------QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM----------STP  238 (296)
T ss_dssp             C----------------------CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH----------HSC
T ss_pred             C----------------------CCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc----------cch
Confidence            3                      345679999999999999999887643211    1111110000          001


Q ss_pred             ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          443 DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       443 ~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ........++++.+|+.+||+   .||++|||++++++
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~---~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          239 IEVLCKGYPSEFATYLNFCRS---LRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHT---SCTTCCCCHHHHHH
T ss_pred             hhhhhccCCHHHHHHHHHHHh---cCCCCCCCHHHHHH
Confidence            111224468899999999999   77799999999886


No 213
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=4.4e-41  Score=338.31  Aligned_cols=265  Identities=20%  Similarity=0.217  Sum_probs=194.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|++.+.||+|+||.||+|++ .+|+.||+|.+......                           ....+. ...
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------------------------~~~~~~-~E~   86 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQ---------------------------GIEEFE-TEI   86 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSS---------------------------HHHHHH-HHH
T ss_pred             HHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChH---------------------------HHHHHH-HHH
Confidence            4567899999999999999999986 46888888876542110                           001111 112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++..        .+..++||||+++|+|.+++.....                ....+++..+.
T Consensus        87 ~~l~~l~h~~iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~  142 (321)
T 2qkw_B           87 ETLSFCRHPHLVSLIGFCDE--------RNEMILIYKYMENGNLKRHLYGSDL----------------PTMSMSWEQRL  142 (321)
T ss_dssp             HGGGSCCCTTBCCEEEECCC--------TTCCEEEEECCTTCBTGGGSSSSCC----------------CSCCCCHHHHH
T ss_pred             HHHHhCCCCCEeeEEEEEcC--------CCeEEEEEEcCCCCcHHHHHhccCC----------------CccccCHHHHH
Confidence            33566679999999999865        3469999999999999999976531                12358899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc-cCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN-YVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      .++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+..     
T Consensus       143 ~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----  217 (321)
T 2qkw_B          143 EICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGR-----  217 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCB-----
T ss_pred             HHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCC-----
Confidence            9999999999999999999999999999999999999999999987543322 2234456899999999987543     


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhh----c----cC--
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTR----L----RS--  442 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~--  442 (502)
                                       ++.++|||||||++|||++|..|+.........       ....|.....    .    .+  
T Consensus       218 -----------------~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  273 (321)
T 2qkw_B          218 -----------------LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV-------NLAEWAVESHNNGQLEQIVDPNL  273 (321)
T ss_dssp             -----------------CCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCC-------CHHHHTHHHHTTTCCCSSSSSSC
T ss_pred             -----------------CCcccchHhHHHHHHHHHhCCCcccccCcHHHH-------HHHHHhhhccccccHHHhcChhh
Confidence                             445779999999999999998887543321100       0001100000    0    00  


Q ss_pred             ccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCc
Q 039267          443 DFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPY  483 (502)
Q Consensus       443 ~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~  483 (502)
                      ........+.++.+++.+||+   .||++|||++++++|..
T Consensus       274 ~~~~~~~~~~~l~~li~~~l~---~dP~~Rps~~ell~~L~  311 (321)
T 2qkw_B          274 ADKIRPESLRKFGDTAVKCLA---LSSEDRPSMGDVLWKLE  311 (321)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTC---SSGGGSCCHHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHHHHHcC---CCcccCcCHHHHHHHHH
Confidence            011223356788899999999   77799999999998753


No 214
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=8.7e-40  Score=323.93  Aligned_cols=252  Identities=17%  Similarity=0.126  Sum_probs=189.4

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.+.||+|+||.||+|++..+|+.||+|++......      ..+..                        ....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~------------------------e~~~   57 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHI------------------------ESKI   57 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC------CHHHH------------------------HHHH
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch------hHHHH------------------------HHHH
Confidence            46799999999999999999999889999999987652210      01111                        1123


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|++++..++.+...       .+..++||||+ +++|.+++...+                   ..+++..++.+
T Consensus        58 l~~l~~~~~i~~~~~~~~~-------~~~~~lv~e~~-~~~L~~~~~~~~-------------------~~~~~~~~~~i  110 (296)
T 3uzp_A           58 YKMMQGGVGIPTIRWCGAE-------GDYNVMVMELL-GPSLEDLFNFCS-------------------RKFSLKTVLLL  110 (296)
T ss_dssp             HHHHTTSTTCCCEEEEEEE-------TTEEEEEEECC-CCBHHHHHHHTT-------------------TCCCHHHHHHH
T ss_pred             HHHhhcCCCCCccccccCC-------CCceEEEEEec-CCCHHHHHHhhc-------------------cCCCHHHHHHH
Confidence            4455677777777666443       34589999999 999999998543                   25789999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeccccccccCCCcc------CCCcccCCCCcCCcccccCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVL---TKRGQIKLIDFGAATDLRIGKNY------VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl---~~~~~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +.||+.||+|||+++|+||||||+|||+   +.++.+||+|||+++........      ......||+.|+|||++.+.
T Consensus       111 ~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  190 (296)
T 3uzp_A          111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI  190 (296)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCC
Confidence            9999999999999999999999999999   58899999999999877654321      23456799999999999764


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcch-----hhHHHHHhhccChHHHHHhhhcc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLK-----NFNMEIKTAQYDLNKWREYTRLR  441 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  441 (502)
                      .                      ++.++|||||||++|||++|..|+.....     .+..... ...          ..
T Consensus       191 ~----------------------~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~----------~~  237 (296)
T 3uzp_A          191 E----------------------QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE-KKM----------ST  237 (296)
T ss_dssp             C----------------------CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH-HHH----------HS
T ss_pred             C----------------------CCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc-ccc----------CC
Confidence            3                      34567999999999999999988764321     1111111 100          00


Q ss_pred             CccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          442 SDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       442 ~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      +........++++.+|+.+||+   .||++|||++++++
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          238 PIEVLCKGYPSEFATYLNFCRS---LRFDDKPDYSYLRQ  273 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHT---SCTTCCCCHHHHHH
T ss_pred             chHHHHhhCCHHHHHHHHHHHh---cCcCcCCCHHHHHH
Confidence            1111224568999999999999   77799999999875


No 215
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=1e-39  Score=326.40  Aligned_cols=274  Identities=17%  Similarity=0.202  Sum_probs=195.6

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEe-----cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIV-----PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF  205 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~  205 (502)
                      .+++..++|.+.+.||+|+||+||+|++.     .+++.||+|++...                         .. ....
T Consensus        21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------------------------~~-~~~~   74 (316)
T 2xir_A           21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-------------------------AT-HSEH   74 (316)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-------------------------CC-HHHH
T ss_pred             ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-------------------------CC-cHHH
Confidence            45678889999999999999999999864     24455666555431                         11 1111


Q ss_pred             hhhHHHHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCc
Q 039267          206 GDYEEWFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDS  284 (502)
Q Consensus       206 ~~~~~~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~  284 (502)
                      ..+..+... +..+ +||||+++++++...       ++..++||||+++|+|.+++.............    ......
T Consensus        75 ~~~~~E~~~-l~~l~~hp~iv~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~----~~~~~~  142 (316)
T 2xir_A           75 RALMSELKI-LIHIGHHLNVVNLLGACTKP-------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA----PEDLYK  142 (316)
T ss_dssp             HHHHHHHHH-HHHHCCCTTBCCEEEEECCT-------TSCCEEEEECCTTEEHHHHHHTCTTSEECC-----------CT
T ss_pred             HHHHHHHHH-HHhcccCCCeeeEEEEEecC-------CCceEEEEEcCCCCcHHHHHHhccccccccccc----chhhhc
Confidence            122222222 3344 699999999998653       235899999999999999998764210000000    000011


Q ss_pred             cccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccc
Q 039267          285 TKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELY  363 (502)
Q Consensus       285 ~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~  363 (502)
                      ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++
T Consensus       143 ~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (316)
T 2xir_A          143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI  222 (316)
T ss_dssp             TCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhh
Confidence            23789999999999999999999999999999999999999999999999999876544322 33455678999999998


Q ss_pred             cCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchh--hHHHHHhhccChHHHHHhhhc
Q 039267          364 VLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKN--FNMEIKTAQYDLNKWREYTRL  440 (502)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  440 (502)
                      .+..                      ++.++||||||+++|||++ |..|+......  ........             
T Consensus       223 ~~~~----------------------~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-------------  267 (316)
T 2xir_A          223 FDRV----------------------YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-------------  267 (316)
T ss_dssp             HHCC----------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT-------------
T ss_pred             cccc----------------------ccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccC-------------
Confidence            7533                      4457799999999999998 88776543321  11111111             


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                       .........+.++.+++.+||+   .||.+|||++++++|
T Consensus       268 -~~~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~ell~~  304 (316)
T 2xir_A          268 -TRMRAPDYTTPEMYQTMLDCWH---GEPSQRPTFSELVEH  304 (316)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             -ccCCCCCCCCHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence             1122344578999999999999   777999999999987


No 216
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=2.9e-40  Score=330.71  Aligned_cols=271  Identities=13%  Similarity=0.147  Sum_probs=187.1

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEec---CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccch
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVP---KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFG  206 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~  206 (502)
                      ....+..++|.+++.||+|+||.||+|++..   ++..||+|.++...                         .......
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-------------------------~~~~~~~   81 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-------------------------SSQREIE   81 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-------------------------CCHHHHH
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-------------------------cchhHHH
Confidence            3456788899999999999999999998764   33356666654321                         1111111


Q ss_pred             hhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccc
Q 039267          207 DYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTK  286 (502)
Q Consensus       207 ~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  286 (502)
                      .+.. ....+..+.||||+++++++.......   ....++||||+++|+|.+++.....              ......
T Consensus        82 ~~~~-e~~~l~~l~h~~iv~~~~~~~~~~~~~---~~~~~~v~e~~~~~~L~~~l~~~~~--------------~~~~~~  143 (313)
T 3brb_A           82 EFLS-EAACMKDFSHPNVIRLLGVCIEMSSQG---IPKPMVILPFMKYGDLHTYLLYSRL--------------ETGPKH  143 (313)
T ss_dssp             HHHH-HHHHHHTCCCTTBCCCCEEEEC----------CEEEEEECCTTCBHHHHHHHTTB--------------TTSCCC
T ss_pred             HHHH-HHHHHhcCCCCCeeeeeEEEeeccccC---CcccEEEEecccCCCHHHHHHHhhh--------------hcCCcc
Confidence            2222 223466678999999999987643210   1246999999999999999975431              112246


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccC
Q 039267          287 RSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       287 l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~  365 (502)
                      +++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......+++.|+|||.+.+
T Consensus       144 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  223 (313)
T 3brb_A          144 IPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD  223 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcC
Confidence            899999999999999999999999999999999999999999999999999876544322 2234457889999999976


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcc
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDF  444 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (502)
                      ..                      ++.++||||||+++|||++ |..|+..............             ....
T Consensus       224 ~~----------------------~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-------------~~~~  268 (313)
T 3brb_A          224 RV----------------------YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH-------------GHRL  268 (313)
T ss_dssp             SC----------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-------------TCCC
T ss_pred             CC----------------------ccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHc-------------CCCC
Confidence            43                      3456799999999999999 7776644332211111110             1112


Q ss_pred             ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          445 TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       445 ~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..+...++++.+++.+||+   .||.+|||++++++|
T Consensus       269 ~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          269 KQPEDCLDELYEIMYSCWR---TDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CCBTTCCHHHHHHHHHTTC---SSGGGSCCHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence            3345678999999999999   777999999999875


No 217
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=2.5e-40  Score=327.96  Aligned_cols=256  Identities=18%  Similarity=0.175  Sum_probs=189.9

Q ss_pred             cccccCCEEEEe-eeeecCceEEEEEEEe--cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          132 RNLKRTDFVIGD-KLGEGSFGVVYSGAIV--PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       132 ~~~~~~~~~~~~-~IG~G~fG~Vy~g~~~--~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      ..+..++|.+.+ .||+|+||+||+|.+.  .+++.||||+++....                         .......+
T Consensus        11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~~   65 (291)
T 1xbb_A           11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-------------------------DPALKDEL   65 (291)
T ss_dssp             CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------------------------------CHHHHHH
T ss_pred             eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-------------------------CHHHHHHH
Confidence            346778899998 9999999999999653  4456677776654211                         11111111


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      . .....+..+.||||+++++++.         .+..++||||+++++|.+++...+                    .++
T Consensus        66 ~-~e~~~l~~l~h~~i~~~~~~~~---------~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~  115 (291)
T 1xbb_A           66 L-AEANVMQQLDNPYIVRMIGICE---------AESWMLVMEMAELGPLNKYLQQNR--------------------HVK  115 (291)
T ss_dssp             H-HHHHHHHTCCCTTBCCEEEEEE---------SSSEEEEEECCTTEEHHHHHHHCT--------------------TCC
T ss_pred             H-HHHHHHHhCCCCCEEEEEEEEC---------CCCcEEEEEeCCCCCHHHHHHhCc--------------------CCC
Confidence            1 1223356668999999999883         235899999999999999998753                    578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........  ......+|+.|+|||++.+.
T Consensus       116 ~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  195 (291)
T 1xbb_A          116 DKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY  195 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccC
Confidence            8999999999999999999999999999999999999999999999999876544332  22334567899999998653


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      .                      ++.++||||||+++|||++ |..|+..............             .....
T Consensus       196 ~----------------------~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-------------~~~~~  240 (291)
T 1xbb_A          196 K----------------------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-------------GERMG  240 (291)
T ss_dssp             E----------------------EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-------------TCCCC
T ss_pred             C----------------------CChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-------------CCCCC
Confidence            3                      3456799999999999999 8888755433221111111             11223


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      .+..+++++.+++.+||+   .||.+|||++++++
T Consensus       241 ~~~~~~~~l~~li~~~l~---~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          241 CPAGCPREMYDLMNLCWT---YDVENRPGFAAVEL  272 (291)
T ss_dssp             CCTTCCHHHHHHHHHHTC---SSTTTSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcC---CChhhCcCHHHHHH
Confidence            345678999999999999   77799999999875


No 218
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=4.7e-40  Score=329.25  Aligned_cols=249  Identities=18%  Similarity=0.218  Sum_probs=182.5

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||+||+|++  +++.||+|.+....                             ....+. .+.
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----------------------------~~~~~~-~E~   52 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESES-----------------------------ERKAFI-VEL   52 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSSTT-----------------------------HHHHHH-HHH
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecChh-----------------------------HHHHHH-HHH
Confidence            5567899999999999999999986  46777777664210                             001111 112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+.++.||||+++++++..          ..++||||+++|+|.+++...+                 ....+++..+.
T Consensus        53 ~~l~~l~hp~iv~~~~~~~~----------~~~lv~e~~~~~~L~~~l~~~~-----------------~~~~~~~~~~~  105 (307)
T 2eva_A           53 RQLSRVNHPNIVKLYGACLN----------PVCLVMEYAEGGSLYNVLHGAE-----------------PLPYYTAAHAM  105 (307)
T ss_dssp             HHHHHCCCTTBCCEEEBCTT----------TTEEEEECCTTCBHHHHHHCSS-----------------SEECCCHHHHH
T ss_pred             HHHhcCCCCCcCeEEEEEcC----------CcEEEEEcCCCCCHHHHHhccC-----------------CCCccCHHHHH
Confidence            33566789999999998752          4899999999999999998653                 11246788999


Q ss_pred             HHHHHHHHHHHHHHH---cCCeeccCCCCcEEEccCCc-EEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          294 QILRQIITSLKKIHD---TGIVHRDVKPANLVLTKRGQ-IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       294 ~i~~qia~gL~yLH~---~~IiHrDlKp~NILl~~~~~-~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      .++.|+++||+|||+   ++|+||||||+|||++.++. +||+|||+++.....    .....||+.|+|||++.+..  
T Consensus       106 ~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~--  179 (307)
T 2eva_A          106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSN--  179 (307)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------------CCTTSSCHHHHTCCC--
T ss_pred             HHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----cccCCCCCceEChhhhCCCC--
Confidence            999999999999999   89999999999999998886 799999999865432    23446899999999997543  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccC
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                          ++.++||||||+++|||++|..|+...........         |....  .........
T Consensus       180 --------------------~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---------~~~~~--~~~~~~~~~  228 (307)
T 2eva_A          180 --------------------YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---------WAVHN--GTRPPLIKN  228 (307)
T ss_dssp             --------------------CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH---------HHHHT--TCCCCCBTT
T ss_pred             --------------------CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH---------HHHhc--CCCCCcccc
Confidence                                44577999999999999999988754332222111         11111  112234456


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ++..+.+|+.+||+   .||.+|||+++++++
T Consensus       229 ~~~~l~~li~~~l~---~dp~~Rps~~ell~~  257 (307)
T 2eva_A          229 LPKPIESLMTRCWS---KDPSQRPSMEEIVKI  257 (307)
T ss_dssp             CCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             cCHHHHHHHHHHhc---CChhhCcCHHHHHHH
Confidence            78999999999999   777999999999873


No 219
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.4e-41  Score=349.78  Aligned_cols=278  Identities=14%  Similarity=0.135  Sum_probs=196.0

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ...++|.+.+.||+|+||+||+|++..+|+.||||++......          .                ..... ..+.
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----------~----------------~~~~~-~~E~   58 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----------R----------------PVDVQ-MREF   58 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----------S----------------CHHHH-HHHH
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc----------c----------------hHHHH-HHHH
Confidence            4557899999999999999999999989999999988652210          0                00001 1112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++....      ....++||||+++|+|.+++....                 ....+++..++
T Consensus        59 ~~l~~l~hpnIv~~~~~~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~~l~~~~~~  115 (396)
T 4eut_A           59 EVLKKLNHKNIVKLFAIEEETT------TRHKVLIMEFCPCGSLYTVLEEPS-----------------NAYGLPESEFL  115 (396)
T ss_dssp             HHHHHCCCTTBCCEEEEEECTT------TCCEEEEECCCTTEEHHHHTTSGG-----------------GTTCCCHHHHH
T ss_pred             HHHHhcCCCCCCeEEEeeccCC------CCeeEEEEecCCCCCHHHHHHhhh-----------------cccCCCHHHHH
Confidence            2356667999999999886543      235899999999999999998653                 11238899999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEE----ccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVL----TKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl----~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      .++.||+.||+|||+++|+||||||+|||+    +.++.+||+|||+++.......  .....||+.|+|||++......
T Consensus       116 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~  193 (396)
T 4eut_A          116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYERAVLR  193 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG--SSCSSSCCTTCCHHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc--cccccCCccccCHHHhhccccc
Confidence            999999999999999999999999999999    7788899999999987654432  2356799999999998642211


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcc---hhhHHHHHhh-ccChHHHHHhh-------
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGL---KNFNMEIKTA-QYDLNKWREYT-------  438 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~---~~~~~~~~~~-~~~~~~~~~~~-------  438 (502)
                      ..              .+..++.++|||||||++|||++|..|+....   .......+.. +.....|....       
T Consensus       194 ~~--------------~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  259 (396)
T 4eut_A          194 KD--------------HQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPI  259 (396)
T ss_dssp             -C--------------HHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCE
T ss_pred             cc--------------cccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCc
Confidence            10              01234567899999999999999988874221   1111111111 11111100000       


Q ss_pred             ----hccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          439 ----RLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       439 ----~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                          ............+..+.+++.+||+   .||++|||++++++
T Consensus       260 ~~~~~~~~~~~l~~~~~~~l~~ll~~~L~---~dP~~R~s~~e~l~  302 (396)
T 4eut_A          260 DWSGDMPVSCSLSRGLQVLLTPVLANILE---ADQEKCWGFDQFFA  302 (396)
T ss_dssp             EEESSCCTTCSSCHHHHHHHHHHHHHHSC---CCTTTSCCHHHHHH
T ss_pred             ccCccCCcccccchHHHhhchHHHHHhhc---cChhhhccHHHHHH
Confidence                0011111223456788899999999   77799999999854


No 220
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.4e-40  Score=324.74  Aligned_cols=253  Identities=14%  Similarity=0.177  Sum_probs=188.1

Q ss_pred             CEEEEeeeeecCceEEEEEEEecCCc---eeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          138 DFVIGDKLGEGSFGVVYSGAIVPKNA---VVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       138 ~~~~~~~IG~G~fG~Vy~g~~~~~~~---~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      .|.+++.||+|+||+||+|++..++.   .||+|.+.....                          ......+. ....
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--------------------------~~~~~~~~-~E~~   74 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE--------------------------MQQVEAFL-REGL   74 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS--------------------------HHHHHHHH-HHHH
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc--------------------------HHHHHHHH-HHHH
Confidence            47778999999999999999865544   466665543110                          00111111 1223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.||||+++++++....       +..++||||+.+|+|.+++...+                   ..+++..+..
T Consensus        75 ~l~~l~h~~iv~~~~~~~~~~-------~~~~~v~e~~~~~~L~~~~~~~~-------------------~~~~~~~~~~  128 (298)
T 3pls_A           75 LMRGLNHPNVLALIGIMLPPE-------GLPHVLLPYMCHGDLLQFIRSPQ-------------------RNPTVKDLIS  128 (298)
T ss_dssp             HHHTCCCTTBCCCCEEECCSS-------SCCEEEECCCTTCBHHHHHHCTT-------------------CCCBHHHHHH
T ss_pred             HHHhCCCCCeeeEEEEEecCC-------CCcEEEEecccCCCHHHHHhccc-------------------cCCCHHHHHH
Confidence            456678999999999987542       23599999999999999998643                   2578889999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---CCCcccCCCCcCCcccccCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCPPELYVLPEETPS  371 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~  371 (502)
                      ++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++........   ......+|+.|+|||.+.+..    
T Consensus       129 i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----  204 (298)
T 3pls_A          129 FGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR----  204 (298)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCC----
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCC----
Confidence            9999999999999999999999999999999999999999999876543221   234456789999999997643    


Q ss_pred             CCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCc
Q 039267          372 PPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                        ++.++||||||+++|||++|..|+.............            ............+
T Consensus       205 ------------------~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~  254 (298)
T 3pls_A          205 ------------------FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL------------AQGRRLPQPEYCP  254 (298)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH------------HTTCCCCCCTTCC
T ss_pred             ------------------CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh------------hcCCCCCCCccch
Confidence                              4456799999999999999776655444333221111            1111223345578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      +++.+|+.+||+   .||.+|||++++++
T Consensus       255 ~~l~~li~~~l~---~~p~~Rps~~~ll~  280 (298)
T 3pls_A          255 DSLYQVMQQCWE---ADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcc---CChhhCcCHHHHHH
Confidence            999999999999   77799999999886


No 221
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.4e-40  Score=335.45  Aligned_cols=272  Identities=18%  Similarity=0.234  Sum_probs=195.3

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEE-----ecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccc
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAI-----VPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEF  205 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~-----~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~  205 (502)
                      -.++..++|.+.+.||+|+||.||+|++     ..+++.||+|.+....                         .. ...
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------------------------~~-~~~   77 (327)
T 2yfx_A           24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-------------------------SE-QDE   77 (327)
T ss_dssp             SCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-------------------------CH-HHH
T ss_pred             cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-------------------------ch-hhH
Confidence            3467888999999999999999999984     3455566666654211                         00 001


Q ss_pred             hhhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcc
Q 039267          206 GDYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDST  285 (502)
Q Consensus       206 ~~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~  285 (502)
                      ..+.. ....+..+.||||+++++++...        +..++||||+++|+|.+++.......             ....
T Consensus        78 ~~~~~-E~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~-------------~~~~  135 (327)
T 2yfx_A           78 LDFLM-EALIISKFNHQNIVRCIGVSLQS--------LPRFILMELMAGGDLKSFLRETRPRP-------------SQPS  135 (327)
T ss_dssp             HHHHH-HHHHHHHCCCTTBCCEEEEECSS--------SSCEEEEECCTTEEHHHHHHHTSCCS-------------SSTT
T ss_pred             HHHHH-HHHHHhhCCCCCCCeEEEEEcCC--------CCcEEEEecCCCCcHHHHHHhhcccc-------------cccc
Confidence            11111 22335666899999999998753        35899999999999999998764211             1123


Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcc
Q 039267          286 KRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTK---RGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPE  361 (502)
Q Consensus       286 ~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~---~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE  361 (502)
                      .+++..++.++.||+.||+|||+++|+||||||+|||++.   +..+||+|||+++........ ......+|+.|+|||
T Consensus       136 ~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  215 (327)
T 2yfx_A          136 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE  215 (327)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHh
Confidence            5889999999999999999999999999999999999984   456999999999866443322 234556899999999


Q ss_pred             cccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhc
Q 039267          362 LYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRL  440 (502)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (502)
                      ++.+..                      ++.++||||||+++|||++ |..|+..............             
T Consensus       216 ~~~~~~----------------------~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-------------  260 (327)
T 2yfx_A          216 AFMEGI----------------------FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-------------  260 (327)
T ss_dssp             HHHHCC----------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-------------
T ss_pred             HhcCCC----------------------CCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc-------------
Confidence            987533                      4457799999999999998 8777654432211111111             


Q ss_pred             cCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          441 RSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       441 ~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      .........++..+.+++.+||+   .||.+|||++++++|+|+....
T Consensus       261 ~~~~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          261 GGRMDPPKNCPGPVYRIMTQCWQ---HQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhc---CChhhCcCHHHHHHHHHHHhcC
Confidence            11122344578999999999999   7779999999999999876443


No 222
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-39  Score=329.02  Aligned_cols=264  Identities=20%  Similarity=0.255  Sum_probs=187.4

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.+.||+|+||.||+|++  +|+.||||++.....                             .....+....
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-----------------------------~~~~~e~~~~   83 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEE-----------------------------ASWFRETEIY   83 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGGH-----------------------------HHHHHHHHHH
T ss_pred             cccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEecccc-----------------------------chhhhHHHHH
Confidence            346799999999999999999986  478888887653210                             0111222223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      ....+.|+||+++++.+......    .+..++||||+++|+|.++++..                     .+++..++.
T Consensus        84 ~~~~~~h~~i~~~~~~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~---------------------~~~~~~~~~  138 (337)
T 3mdy_A           84 QTVLMRHENILGFIAADIKGTGS----WTQLYLITDYHENGSLYDYLKST---------------------TLDAKSMLK  138 (337)
T ss_dssp             TSTTCCCTTBCCEEEEEEESCGG----GCEEEEEECCCTTCBHHHHHHHC---------------------CBCHHHHHH
T ss_pred             HHHhhcCCCeeeEEEEEccCCCC----CCceEEEEeccCCCcHHHHhhcc---------------------CCCHHHHHH
Confidence            34445899999999998764321    24689999999999999999764                     478899999


Q ss_pred             HHHHHHHHHHHHHHc--------CCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---CCCcccCCCCcCCcccc
Q 039267          295 ILRQIITSLKKIHDT--------GIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCPPELY  363 (502)
Q Consensus       295 i~~qia~gL~yLH~~--------~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~  363 (502)
                      ++.|++.||+|||++        +|+||||||+|||++.++.+||+|||+++........   ......||+.|+|||++
T Consensus       139 i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  218 (337)
T 3mdy_A          139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL  218 (337)
T ss_dssp             HHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhc
Confidence            999999999999998        9999999999999999999999999999876543322   22355799999999999


Q ss_pred             cCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhC----------CCCCCCcch---hhHHHHHhhccC
Q 039267          364 VLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIP----------TLRSISGLK---NFNMEIKTAQYD  430 (502)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg----------~~p~~~~~~---~~~~~~~~~~~~  430 (502)
                      .+.......                .++.++|||||||++|||++|          ..|+.....   .........   
T Consensus       219 ~~~~~~~~~----------------~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---  279 (337)
T 3mdy_A          219 DESLNRNHF----------------QSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIV---  279 (337)
T ss_dssp             TTCCCTTCT----------------HHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH---
T ss_pred             ccccCCccc----------------cCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHH---
Confidence            765443321                111247999999999999999          444322111   111111000   


Q ss_pred             hHHHHHhhhccCccc---cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          431 LNKWREYTRLRSDFT---ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~---~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                           .....++..+   ..+.+++++.+|+.+||+   .||.+|||++++++|
T Consensus       280 -----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~---~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          280 -----CIKKLRPSFPNRWSSDECLRQMGKLMTECWA---HNPASRLTALRVKKT  325 (337)
T ss_dssp             -----TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSC---SSGGGSCCHHHHHHH
T ss_pred             -----hhhccCccccccchhhHHHHHHHHHHHHhhh---hChhhCCCHHHHHHH
Confidence                 0001111111   122456789999999999   777999999999976


No 223
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.5e-40  Score=327.35  Aligned_cols=258  Identities=18%  Similarity=0.219  Sum_probs=193.9

Q ss_pred             cccccCCEEEEe-eeeecCceEEEEEEEe--cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          132 RNLKRTDFVIGD-KLGEGSFGVVYSGAIV--PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       132 ~~~~~~~~~~~~-~IG~G~fG~Vy~g~~~--~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      +.+..++|.+.+ .||+|+||.||+|++.  .++..||+|+++....                          ......+
T Consensus         4 ~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~   57 (287)
T 1u59_A            4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--------------------------KADTEEM   57 (287)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC--------------------------HHHHHHH
T ss_pred             ccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc--------------------------hhHHHHH
Confidence            457778888887 9999999999999864  3566677777654210                          0001111


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      . .+...+..+.||||+++++++..         +..++||||+++++|.+++...+                   ..++
T Consensus        58 ~-~E~~~l~~l~h~~i~~~~~~~~~---------~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~  108 (287)
T 1u59_A           58 M-REAQIMHQLDNPYIVRLIGVCQA---------EALMLVMEMAGGGPLHKFLVGKR-------------------EEIP  108 (287)
T ss_dssp             H-HHHHHHHHCCCTTBCCEEEEEES---------SSEEEEEECCTTEEHHHHHTTCT-------------------TTSC
T ss_pred             H-HHHHHHHhCCCCCEeEEEEEecC---------CCcEEEEEeCCCCCHHHHHHhCC-------------------ccCC
Confidence            1 12233556689999999998832         35999999999999999997542                   2578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +..+..++.|++.||+|||+.+|+||||||+|||++.++.+||+|||+++........  ......+|+.|+|||++.+.
T Consensus       109 ~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  188 (287)
T 1u59_A          109 VSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR  188 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccC
Confidence            9999999999999999999999999999999999999999999999999987544322  22344578999999998653


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      .                      ++.++||||||+++|||++ |..|+..............             .....
T Consensus       189 ~----------------------~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~-------------~~~~~  233 (287)
T 1u59_A          189 K----------------------FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-------------GKRME  233 (287)
T ss_dssp             E----------------------ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-------------TCCCC
T ss_pred             C----------------------CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc-------------CCcCC
Confidence            3                      3456799999999999998 8888755433221111111             11123


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCC
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHP  482 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP  482 (502)
                      .+..+++++.+++.+||+   .||++|||++++++|.
T Consensus       234 ~~~~~~~~l~~li~~~l~---~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          234 CPPECPPELYALMSDCWI---YKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             CCTTCCHHHHHHHHHTTC---SSGGGSCCHHHHHHHH
T ss_pred             CCCCcCHHHHHHHHHHcC---CChhhCcCHHHHHHHH
Confidence            445679999999999999   7779999999999874


No 224
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.4e-40  Score=331.69  Aligned_cols=258  Identities=17%  Similarity=0.190  Sum_probs=184.9

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCc----eeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchh
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNA----VVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGD  207 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~----~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~  207 (502)
                      .++..++|.+.+.||+|+||.||+|++..++.    .||+|.++..                         .. ......
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-------------------------~~-~~~~~~   92 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-------------------------YT-EKQRVD   92 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-------------------------CC-HHHHHH
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-------------------------CC-HHHHHH
Confidence            46778899999999999999999999865432    3556555431                         11 011111


Q ss_pred             hHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcccc
Q 039267          208 YEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKR  287 (502)
Q Consensus       208 ~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  287 (502)
                      +. .+...+..+.||||+++++++...        +..++||||+++|+|.+++....                   ..+
T Consensus        93 ~~-~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~  144 (333)
T 1mqb_A           93 FL-GEAGIMGQFSHHNIIRLEGVISKY--------KPMMIITEYMENGALDKFLREKD-------------------GEF  144 (333)
T ss_dssp             HH-HHHHHHHTCCCTTBCCEEEEECSS--------SSEEEEEECCTTEEHHHHHHHTT-------------------TCS
T ss_pred             HH-HHHHHHHhCCCCCCCcEEEEEecC--------CCcEEEEeCCCCCcHHHHHHhCC-------------------CCC
Confidence            11 122346667899999999998653        35999999999999999998653                   257


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCc--cCCCcccCCCCcCCcccccC
Q 039267          288 SALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKN--YVPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       288 ~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~  365 (502)
                      ++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.......  .......+|+.|+|||++.+
T Consensus       145 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  224 (333)
T 1mqb_A          145 SVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY  224 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhccc
Confidence            8999999999999999999999999999999999999999999999999987654322  12233456889999999875


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcc
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDF  444 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (502)
                      ..                      ++.++|||||||++|||++ |..|+..............             ....
T Consensus       225 ~~----------------------~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-------------~~~~  269 (333)
T 1mqb_A          225 RK----------------------FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-------------GFRL  269 (333)
T ss_dssp             CC----------------------CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-------------TCCC
T ss_pred             CC----------------------CCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC-------------CCcC
Confidence            43                      3456799999999999999 8888754432211111100             1122


Q ss_pred             ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          445 TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       445 ~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      +....++.++.+|+.+||+   .||++|||+++++++
T Consensus       270 ~~~~~~~~~l~~li~~~l~---~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          270 PTPMDCPSAIYQLMMQCWQ---QERARRPKFADIVSI  303 (333)
T ss_dssp             CCCTTCBHHHHHHHHHHTC---SSTTTSCCHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence            2344578999999999999   777999999999875


No 225
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.6e-40  Score=331.45  Aligned_cols=268  Identities=18%  Similarity=0.175  Sum_probs=193.9

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      .+..++|.+.+.||+|+||.||+|+...+|+.||+|++.....                           .....+ ..+
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~~-~~E   76 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQ---------------------------QDREEA-QRE   76 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSH---------------------------HHHHHH-HHH
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCH---------------------------HHHHHH-HHH
Confidence            3667789999999999999999999988899999988754210                           000111 111


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++.....    ..+..++||||+++|+|.+++.....                ....+++..+
T Consensus        77 ~~~l~~l~h~~iv~~~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~  136 (317)
T 2buj_A           77 ADMHRLFNHPNILRLVAYCLRERG----AKHEAWLLLPFFKRGTLWNEIERLKD----------------KGNFLTEDQI  136 (317)
T ss_dssp             HHHHHTCCCTTBCCCCEEEEEEET----TEEEEEEEEECCTTCBHHHHHHHHHT----------------TTCCCCHHHH
T ss_pred             HHHHhhcCCCCeeeEEEEEEeccC----CCceeEEEEEeCCCCcHHHHHHHHHh----------------cCCCCCHHHH
Confidence            233556689999999999874321    13358999999999999999986421                1235889999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--------CCCcccCCCCcCCccccc
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--------VPNRTLLDPDYCPPELYV  364 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--------~~~~~~gt~~y~aPE~~~  364 (502)
                      +.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........        ......||+.|+|||++.
T Consensus       137 ~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  216 (317)
T 2buj_A          137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS  216 (317)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSS
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhc
Confidence            999999999999999999999999999999999999999999998865321110        012335799999999986


Q ss_pred             CCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcc
Q 039267          365 LPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDF  444 (502)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (502)
                      +...                   ..++.++||||||+++|||++|..|+......        ......   ........
T Consensus       217 ~~~~-------------------~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~---~~~~~~~~  266 (317)
T 2buj_A          217 VQSH-------------------CVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK--------GDSVAL---AVQNQLSI  266 (317)
T ss_dssp             CCSE-------------------EEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT--------TSCHHH---HHHCC--C
T ss_pred             cCCC-------------------cCCCchhhHHHHHHHHHHHHhCCCChhhhhcc--------cchhhH---HhhccCCC
Confidence            5321                   12456789999999999999998886321110        000000   00001122


Q ss_pred             ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          445 TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       445 ~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      +.....+.++.+|+.+||+   .||.+|||++++++|
T Consensus       267 ~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          267 PQSPRHSSALWQLLNSMMT---VDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CCCTTSCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CccccCCHHHHHHHHHHhh---cChhhCCCHHHHHHH
Confidence            2334578999999999999   777999999999987


No 226
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=9e-40  Score=357.58  Aligned_cols=262  Identities=19%  Similarity=0.255  Sum_probs=191.0

Q ss_pred             cccccCCEEEEe-eeeecCceEEEEEEEec--CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          132 RNLKRTDFVIGD-KLGEGSFGVVYSGAIVP--KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       132 ~~~~~~~~~~~~-~IG~G~fG~Vy~g~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      +.+.++++.+.+ .||+|+||.||+|.+..  ++..||||+++.....   ...+.+..|                    
T Consensus       330 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~E--------------------  386 (613)
T 2ozo_A          330 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK---ADTEEMMRE--------------------  386 (613)
T ss_dssp             SBCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS---TTHHHHHHH--------------------
T ss_pred             eeccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh---HHHHHHHHH--------------------
Confidence            456777888877 89999999999998863  4456777777642110   000111111                    


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                          ...+..+.||||++++++|..         +..+|||||+++|+|.+++...+                   ..++
T Consensus       387 ----~~il~~l~hpniv~l~~~~~~---------~~~~lv~E~~~~g~L~~~l~~~~-------------------~~l~  434 (613)
T 2ozo_A          387 ----AQIMHQLDNPYIVRLIGVCQA---------EALMLVMEMAGGGPLHKFLVGKR-------------------EEIP  434 (613)
T ss_dssp             ----HHHHTTCCCTTBCCEEEEEES---------SSEEEEEECCTTCBHHHHHTTCT-------------------TTSC
T ss_pred             ----HHHHHhCCCCCEeeEEEEecc---------CCeEEEEEeCCCCcHHHHHhhcc-------------------CCCC
Confidence                123556679999999998853         24999999999999999997543                   2578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccC--CCcccCCCCcCCcccccCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYV--PNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~  366 (502)
                      +..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.........  .....+|+.|+|||++...
T Consensus       435 ~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~  514 (613)
T 2ozo_A          435 VSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR  514 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCC
Confidence            99999999999999999999999999999999999999999999999999775443221  2234467899999999753


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                                            .++.++|||||||+||||++ |..|+..............+             ....
T Consensus       515 ----------------------~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-------------~~~~  559 (613)
T 2ozo_A          515 ----------------------KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-------------KRME  559 (613)
T ss_dssp             ----------------------CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTT-------------CCCC
T ss_pred             ----------------------CCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-------------CCCC
Confidence                                  34567899999999999998 88887544322211111111             1233


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHH---hcCCcccc
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAA---LRHPYFLL  486 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~ev---l~HP~f~~  486 (502)
                      .+..+++++.+||.+||+   .||++|||++++   |++.|+..
T Consensus       560 ~p~~~~~~l~~li~~cl~---~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          560 CPPECPPELYALMSDCWI---YKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             CCTTCCHHHHHHHHHTTC---SSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHcC---CChhHCcCHHHHHHHHHHHHHHh
Confidence            455689999999999999   777999999997   45555553


No 227
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=7.6e-40  Score=325.17  Aligned_cols=254  Identities=17%  Similarity=0.235  Sum_probs=183.9

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCc---eeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNA---VVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~---~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      .+|.+.+.||+|+||+||+|++..++.   .||+|.+.....                          ......+. .+.
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~--------------------------~~~~~~~~-~E~   77 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--------------------------IGEVSQFL-TEG   77 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS--------------------------HHHHHHHH-HHH
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC--------------------------HHHHHHHH-HHH
Confidence            459999999999999999999754332   355555443110                          01111111 122


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++...       ++..++||||+++|+|.+++....                   ..+++..+.
T Consensus        78 ~~l~~l~h~~iv~~~~~~~~~-------~~~~~~v~e~~~~~~L~~~l~~~~-------------------~~~~~~~~~  131 (298)
T 3f66_A           78 IIMKDFSHPNVLSLLGICLRS-------EGSPLVVLPYMKHGDLRNFIRNET-------------------HNPTVKDLI  131 (298)
T ss_dssp             HHHHTCCCTTBCCCCEEECCS-------SSCCEEEEECCTTCBHHHHHHCTT-------------------CCCCHHHHH
T ss_pred             HHHHhCCCCCEeeeeeEEEcC-------CCceEEEEeCCCCCCHHHHHHhcc-------------------cCCCHHHHH
Confidence            346667899999999987653       335899999999999999997643                   246888999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---CCCcccCCCCcCCcccccCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++........   ......+|+.|+|||.+.+..   
T Consensus       132 ~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---  208 (298)
T 3f66_A          132 GFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK---  208 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCC---
Confidence            99999999999999999999999999999999999999999999876544322   234456788999999987543   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                         ++.++||||||+++|||++|..|+...............            ......+...
T Consensus       209 -------------------~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~  257 (298)
T 3f66_A          209 -------------------FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ------------GRRLLQPEYC  257 (298)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT------------TCCCCCCTTC
T ss_pred             -------------------CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc------------CCCCCCCccC
Confidence                               445679999999999999965554444332222111110            0112233457


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ++++.+++.+||+   .||++|||++++++
T Consensus       258 ~~~l~~li~~~l~---~~p~~Rps~~ell~  284 (298)
T 3f66_A          258 PDPLYEVMLKCWH---PKAEMRPSFSELVS  284 (298)
T ss_dssp             CHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcC---CChhhCcCHHHHHH
Confidence            8899999999999   77799999999986


No 228
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.6e-39  Score=327.41  Aligned_cols=268  Identities=20%  Similarity=0.232  Sum_probs=182.6

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHH
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEW  211 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~  211 (502)
                      .++...+|++.+.||+|+||.||+|++..+|+.||+|++.....                           .....+..+
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~~~~e   75 (337)
T 3ll6_A           23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE---------------------------EKNRAIIQE   75 (337)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH---------------------------HHHHHHHHH
T ss_pred             eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCch---------------------------HHHHHHHHH
Confidence            45667789999999999999999999988999999987754210                           000111111


Q ss_pred             HHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          212 FNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       212 ~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      . ..+..+ .||||+++++++...........+..++||||+ +|+|.+++....                 ....+++.
T Consensus        76 ~-~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~-~g~L~~~l~~~~-----------------~~~~~~~~  136 (337)
T 3ll6_A           76 V-CFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKME-----------------SRGPLSCD  136 (337)
T ss_dssp             H-HHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECC-SEEHHHHHHHHH-----------------TTCSCCHH
T ss_pred             H-HHHHHhccCCChhhccccccccccccccCCceEEEEEEec-CCCHHHHHHHhh-----------------ccCCCCHH
Confidence            1 223444 499999999998654443333455689999999 589999997632                 11258899


Q ss_pred             HHHHHHHHHHHHHHHHHHcC--CeeccCCCCcEEEccCCcEEEeeccccccccCCCccC-----------CCcccCCCCc
Q 039267          291 IIKQILRQIITSLKKIHDTG--IVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYV-----------PNRTLLDPDY  357 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~--IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-----------~~~~~gt~~y  357 (502)
                      .++.++.||+.||+|||+++  |+||||||+|||++.++.+||+|||+++.........           .....||+.|
T Consensus       137 ~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y  216 (337)
T 3ll6_A          137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMY  216 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCc
Confidence            99999999999999999999  9999999999999999999999999998765432211           1134589999


Q ss_pred             CCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHh
Q 039267          358 CPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREY  437 (502)
Q Consensus       358 ~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  437 (502)
                      +|||++....                   ...++.++|||||||++|||++|..|+........  .             
T Consensus       217 ~aPE~~~~~~-------------------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~-------------  262 (337)
T 3ll6_A          217 RTPEIIDLYS-------------------NFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI--V-------------  262 (337)
T ss_dssp             -------CCT-------------------TSCSSHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred             CChhhhhccc-------------------cCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh--h-------------
Confidence            9999984211                   12345678999999999999999988743321100  0             


Q ss_pred             hhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCc
Q 039267          438 TRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPY  483 (502)
Q Consensus       438 ~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~  483 (502)
                       ............+..+.+|+.+||+   .||.+|||++|+++|..
T Consensus       263 -~~~~~~~~~~~~~~~~~~li~~~l~---~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          263 -NGKYSIPPHDTQYTVFHSLIRAMLQ---VNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             ----CCCCTTCCSSGGGHHHHHHHSC---SSGGGSCCHHHHHHHHH
T ss_pred             -cCcccCCcccccchHHHHHHHHHcc---CChhhCcCHHHHHHHHH
Confidence             0011122334467789999999999   77799999999998843


No 229
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.7e-40  Score=331.71  Aligned_cols=270  Identities=18%  Similarity=0.192  Sum_probs=196.7

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEE----ecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhh
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAI----VPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDY  208 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~----~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~  208 (502)
                      .+..++|++.+.||+|+||.||+|++    ..+|+.||+|++....                           ......+
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------------------------~~~~~~~   89 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------------------EEHLRDF   89 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---------------------------SHHHHHH
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---------------------------HHHHHHH
Confidence            46677899999999999999999985    3456667776655311                           0111111


Q ss_pred             HHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccC
Q 039267          209 EEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRS  288 (502)
Q Consensus       209 ~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (502)
                      . .+...+..+.|+||+++++++....      ....++||||+++++|.+++...+                   ..++
T Consensus        90 ~-~E~~~l~~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~-------------------~~~~  143 (326)
T 2w1i_A           90 E-REIEILKSLQHDNIVKYKGVCYSAG------RRNLKLIMEYLPYGSLRDYLQKHK-------------------ERID  143 (326)
T ss_dssp             H-HHHHHHHTCCCTTBCCEEEEECC----------CCEEEECCCTTCBHHHHHHHST-------------------TSSC
T ss_pred             H-HHHHHHHhCCCCCeeeEEEEEEecC------CCceEEEEECCCCCCHHHHHHhcc-------------------cCCC
Confidence            1 1223456668999999999886542      235899999999999999998753                   2478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCC
Q 039267          289 ALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       289 ~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +..++.++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++........  ......+|..|+|||++.+.
T Consensus       144 ~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  223 (326)
T 2w1i_A          144 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES  223 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCC
Confidence            8999999999999999999999999999999999999999999999999987544322  22344578889999998753


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChH---HHHHhhhccCc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLN---KWREYTRLRSD  443 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  443 (502)
                      .                      ++.++||||||+++|||++|..|+......+............   ...........
T Consensus       224 ~----------------------~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (326)
T 2w1i_A          224 K----------------------FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR  281 (326)
T ss_dssp             E----------------------EEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred             C----------------------CCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence            3                      3356799999999999999988765443333332211111100   11111112223


Q ss_pred             cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          444 FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       444 ~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      .+.+..+++++.+|+.+||+   .||++|||++++++
T Consensus       282 ~~~~~~~~~~l~~li~~cl~---~dP~~Rps~~el~~  315 (326)
T 2w1i_A          282 LPRPDGCPDEIYMIMTECWN---NNVNQRPSFRDLAL  315 (326)
T ss_dssp             CCCCTTCCHHHHHHHHHHSC---SSGGGSCCHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHcC---CChhhCcCHHHHHH
Confidence            34556789999999999999   77799999999985


No 230
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.2e-40  Score=337.95  Aligned_cols=255  Identities=16%  Similarity=0.210  Sum_probs=175.5

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCC---ceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKN---AVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~---~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ..|.+.+.||+|+||+||+|++..++   ..||+|.++....                          ......+. .+.
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~-~E~  141 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--------------------------IGEVSQFL-TEG  141 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC--------------------------SHHHHHHH-HHH
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC--------------------------HHHHHHHH-HHH
Confidence            35888999999999999999986433   2456665543111                          01111111 112


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.||||+++++++...       ++..++||||+++|+|.+++...+                   ..+++..+.
T Consensus       142 ~il~~l~hpnIv~~~~~~~~~-------~~~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~  195 (373)
T 3c1x_A          142 IIMKDFSHPNVLSLLGICLRS-------EGSPLVVLPYMKHGDLRNFIRNET-------------------HNPTVKDLI  195 (373)
T ss_dssp             TTSTTCCCTTBCCCCEEECCC-------SSCCEEEEECCTTCBHHHHHHCTT-------------------CCCBHHHHH
T ss_pred             HHHHhCCCCCcceEEEEEEcC-------CCCeEEEEECCCCCCHHHHHhhcc-------------------cCCCHHHHH
Confidence            235566799999999987643       235899999999999999998653                   246888999


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---CCCcccCCCCcCCcccccCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........   ......+|+.|+|||++.+..   
T Consensus       196 ~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---  272 (373)
T 3c1x_A          196 GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK---  272 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCC---
Confidence            99999999999999999999999999999999999999999999876443221   223456788999999987543   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLD  450 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                                         ++.++|||||||++|||++|..|+..............            .......+..+
T Consensus       273 -------------------~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~------------~~~~~~~p~~~  321 (373)
T 3c1x_A          273 -------------------FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL------------QGRRLLQPEYC  321 (373)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH------------TTCCCCCCTTC
T ss_pred             -------------------CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH------------cCCCCCCCCCC
Confidence                               44577999999999999995433332222211111000            00112234457


Q ss_pred             chHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          451 SGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       451 s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ++++.+++.+||+   .||++|||+++++++
T Consensus       322 ~~~l~~li~~cl~---~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          322 PDPLYEVMLKCWH---PKAEMRPSFSELVSR  349 (373)
T ss_dssp             CHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcC---CChhhCcCHHHHHHH
Confidence            8999999999999   777999999999875


No 231
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=4.9e-40  Score=360.84  Aligned_cols=257  Identities=18%  Similarity=0.178  Sum_probs=188.4

Q ss_pred             ccccccCCEEEEe-eeeecCceEEEEEEEe--cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchh
Q 039267          131 RRNLKRTDFVIGD-KLGEGSFGVVYSGAIV--PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGD  207 (502)
Q Consensus       131 ~~~~~~~~~~~~~-~IG~G~fG~Vy~g~~~--~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~  207 (502)
                      .+.+....+.+.. .||+|+||+||+|.+.  .+++.||||+++....                         .......
T Consensus       362 ~~~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-------------------------~~~~~~~  416 (635)
T 4fl3_A          362 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-------------------------DPALKDE  416 (635)
T ss_dssp             SSBCCGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-------------------------CGGGHHH
T ss_pred             cccccchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-------------------------CHHHHHH
Confidence            3456666677654 8999999999999764  3456777777764221                         0000111


Q ss_pred             hHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcccc
Q 039267          208 YEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKR  287 (502)
Q Consensus       208 ~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  287 (502)
                      +. .+...+..+.|+||+++++++..         +..+|||||+++|+|.+++...+                    .+
T Consensus       417 ~~-~E~~il~~l~hpnIv~l~~~~~~---------~~~~lv~E~~~~g~L~~~l~~~~--------------------~l  466 (635)
T 4fl3_A          417 LL-AEANVMQQLDNPYIVRMIGICEA---------ESWMLVMEMAELGPLNKYLQQNR--------------------HV  466 (635)
T ss_dssp             HH-HHHHHHHHCCCTTBCCEEEEEES---------SSEEEEEECCTTEEHHHHHHHCT--------------------TC
T ss_pred             HH-HHHHHHHhCCCCCEeeEEEEEec---------CCEEEEEEccCCCCHHHHHhhCC--------------------CC
Confidence            11 12233556679999999998843         24899999999999999998653                    57


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccC
Q 039267          288 SALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       288 ~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~  365 (502)
                      ++..++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+......  ......+|+.|+|||++..
T Consensus       467 ~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~  546 (635)
T 4fl3_A          467 KDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY  546 (635)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcC
Confidence            89999999999999999999999999999999999999999999999999987554322  2334457889999999975


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcc
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDF  444 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (502)
                      .                      .++.++|||||||++|||++ |..|+..............+             ...
T Consensus       547 ~----------------------~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-------------~~~  591 (635)
T 4fl3_A          547 Y----------------------KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-------------ERM  591 (635)
T ss_dssp             C----------------------CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-------------CCC
T ss_pred             C----------------------CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------CCC
Confidence            3                      34567899999999999998 88887654432221111111             122


Q ss_pred             ccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          445 TILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       445 ~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ..+..+++++.+||.+||+   .||++|||++++++
T Consensus       592 ~~p~~~~~~l~~li~~cl~---~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          592 GCPAGCPREMYDLMNLCWT---YDVENRPGFAAVEL  624 (635)
T ss_dssp             CCCTTCCHHHHHHHHHHTC---SSTTTSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcC---CCHhHCcCHHHHHH
Confidence            3455689999999999999   77799999999875


No 232
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=7.5e-40  Score=333.88  Aligned_cols=265  Identities=14%  Similarity=0.094  Sum_probs=186.6

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecC--------CceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchh
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPK--------NAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGD  207 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~  207 (502)
                      .++|.+.+.||+|+||.||+|++..+        ++.||+|++...         ..+..|.                  
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~------------------   93 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQ------------------   93 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHH------------------
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHH------------------
Confidence            47899999999999999999998763        667777776541         1111122                  


Q ss_pred             hHHHHHHHhhhcCCccccccccccccccC-------C-ccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccc
Q 039267          208 YEEWFNYRLSRAAPETCAEFLGSFVADKT-------N-SQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVL  279 (502)
Q Consensus       208 ~~~~~~~~l~~~~h~niv~l~g~~~~~~~-------~-~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~  279 (502)
                            ..+..+.|+||+++++.+.....       . .....+..++||||+ +++|.+++....              
T Consensus        94 ------~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------  152 (352)
T 2jii_A           94 ------NFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--------------  152 (352)
T ss_dssp             ------HHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--------------
T ss_pred             ------HHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--------------
Confidence                  22444568888875443221100       0 000134689999999 999999998651              


Q ss_pred             cCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCC--cEEEeeccccccccCCCcc------CCCcc
Q 039267          280 EGEDSTKRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRG--QIKLIDFGAATDLRIGKNY------VPNRT  351 (502)
Q Consensus       280 ~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~--~~kL~DFGla~~~~~~~~~------~~~~~  351 (502)
                          ...+++..++.++.||+.||+|||+++|+||||||+|||++.++  .+||+|||+++........      .....
T Consensus       153 ----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~  228 (352)
T 2jii_A          153 ----KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPH  228 (352)
T ss_dssp             ----GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTT
T ss_pred             ----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccc
Confidence                12589999999999999999999999999999999999999998  9999999999876543221      12345


Q ss_pred             cCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccCh
Q 039267          352 LLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDL  431 (502)
Q Consensus       352 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~  431 (502)
                      .||+.|+|||++.+..                      ++.++|||||||++|||++|..|+...............   
T Consensus       229 ~gt~~y~aPE~~~~~~----------------------~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~---  283 (352)
T 2jii_A          229 EGDLEFISMDLHKGCG----------------------PSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQ---  283 (352)
T ss_dssp             CSCTTTCCHHHHTTCC----------------------CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHH---
T ss_pred             cCCccccCHHHHccCC----------------------CCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHH---
Confidence            7999999999997643                      445779999999999999999987655422222211110   


Q ss_pred             HHHHH-hhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          432 NKWRE-YTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       432 ~~~~~-~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                       .+.. ..........+...+.++.+|+.+||+   .||++|||++++++.
T Consensus       284 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~---~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          284 -KFVDKPGPFVGPCGHWIRPSETLQKYLKVVMA---LTYEEKPPYAMLRNN  330 (352)
T ss_dssp             -HHHHSCCCEECTTSCEECCCHHHHHHHHHHHT---CCTTCCCCHHHHHHH
T ss_pred             -hccCChhhhhhhccccCCCcHHHHHHHHHHHh---CChhhCCCHHHHHHH
Confidence             0000 000111111223568999999999999   777999999998763


No 233
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.8e-40  Score=337.72  Aligned_cols=263  Identities=16%  Similarity=0.142  Sum_probs=189.1

Q ss_pred             cccccCCEEEEeeeeecCceEEEEEE-----EecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccch
Q 039267          132 RNLKRTDFVIGDKLGEGSFGVVYSGA-----IVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFG  206 (502)
Q Consensus       132 ~~~~~~~~~~~~~IG~G~fG~Vy~g~-----~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~  206 (502)
                      .++..++|.+.+.||+|+||+||+|+     ...+++.||+|+++....                           .++.
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~  112 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---------------------------WEFY  112 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---------------------------HHHH
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---------------------------hHHH
Confidence            34677889999999999999999995     455677777777653210                           1111


Q ss_pred             hhHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccc
Q 039267          207 DYEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTK  286 (502)
Q Consensus       207 ~~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  286 (502)
                      . +.....++....|+||+.+++.+...        +..+|||||+++|+|.+++...+.               .....
T Consensus       113 ~-e~~~~~~l~~~~~~~iv~~~~~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~  168 (365)
T 3e7e_A          113 I-GTQLMERLKPSMQHMFMKFYSAHLFQ--------NGSVLVGELYSYGTLLNAINLYKN---------------TPEKV  168 (365)
T ss_dssp             H-HHHHHHHSCGGGGGGBCCEEEEEECS--------SCEEEEECCCCSCBHHHHHHHHHT---------------STTCS
T ss_pred             H-HHHHHHHhhhhhhhhhhhhheeeecC--------CCcEEEEeccCCCcHHHHHHHhhc---------------ccccC
Confidence            1 11111234455699999999998763        459999999999999999986421               11236


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEcc-----------CCcEEEeeccccccccCC-CccCCCcccCC
Q 039267          287 RSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTK-----------RGQIKLIDFGAATDLRIG-KNYVPNRTLLD  354 (502)
Q Consensus       287 l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~-----------~~~~kL~DFGla~~~~~~-~~~~~~~~~gt  354 (502)
                      +++..++.|+.||+.||+|||+++|+||||||+|||++.           ++.+||+|||+|+.+... .........||
T Consensus       169 l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt  248 (365)
T 3e7e_A          169 MPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCET  248 (365)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCC
Confidence            899999999999999999999999999999999999998           899999999999865422 22234566799


Q ss_pred             CCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHH
Q 039267          355 PDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKW  434 (502)
Q Consensus       355 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  434 (502)
                      +.|||||++.+..                      ++.++|||||||++|||++|..|+.........            
T Consensus       249 ~~y~aPE~~~~~~----------------------~~~~~DiwslG~il~elltg~~pf~~~~~~~~~------------  294 (365)
T 3e7e_A          249 SGFQCVEMLSNKP----------------------WNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK------------  294 (365)
T ss_dssp             TSCCCHHHHTTCC----------------------BSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE------------
T ss_pred             CCCCChHHhcCCC----------------------CCccccHHHHHHHHHHHHhCCCccccCCCCcee------------
Confidence            9999999997643                      456789999999999999999987544321100            


Q ss_pred             HHhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcC-HHHHhc--CCccccCC
Q 039267          435 REYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLS-AAAALR--HPYFLLGG  488 (502)
Q Consensus       435 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps-~~evl~--HP~f~~~~  488 (502)
                           ....+... ..++...+++..||+   .+|.+|++ ++++.+  ..|+....
T Consensus       295 -----~~~~~~~~-~~~~~~~~~~~~~l~---~~p~~r~~~~~~l~~~l~~~l~~~~  342 (365)
T 3e7e_A          295 -----PEGLFRRL-PHLDMWNEFFHVMLN---IPDCHHLPSLDLLRQKLKKVFQQHY  342 (365)
T ss_dssp             -----ECSCCTTC-SSHHHHHHHHHHHHC---CCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             -----echhcccc-CcHHHHHHHHHHHcC---CCCCCcchHHHHHHHHHHHHHHHhh
Confidence                 00001011 236677899999999   77799865 444333  34554433


No 234
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=4.9e-40  Score=327.96  Aligned_cols=265  Identities=20%  Similarity=0.209  Sum_probs=187.9

Q ss_pred             EEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHhhh
Q 039267          139 FVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRLSR  218 (502)
Q Consensus       139 ~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l~~  218 (502)
                      |..++.||+|+||.||+|..  +++.||+|++........                        .+...........+..
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~------------------------~~~~~~~~~E~~~l~~   86 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITT------------------------EELKQQFDQEIKVMAK   86 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCT------------------------TTHHHHHHHHHHHHHH
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcch------------------------HHHHHHHHHHHHHHHh
Confidence            33458999999999999985  677888887764321100                        0111111112233566


Q ss_pred             cCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHH
Q 039267          219 AAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQ  298 (502)
Q Consensus       219 ~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  298 (502)
                      +.||||+++++++...        +..++||||+++|+|.+++....                 ....+++..++.++.|
T Consensus        87 l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~-----------------~~~~~~~~~~~~i~~~  141 (307)
T 2nru_A           87 CQHENLVELLGFSSDG--------DDLCLVYVYMPNGSLLDRLSCLD-----------------GTPPLSWHMRCKIAQG  141 (307)
T ss_dssp             CCCTTBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHTGG-----------------GCCCCCHHHHHHHHHH
T ss_pred             cCCCCeEEEEEEEecC--------CceEEEEEecCCCcHHHHHHhcc-----------------CCCCCCHHHHHHHHHH
Confidence            6899999999998653        35999999999999999998542                 1235889999999999


Q ss_pred             HHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc-CCCcccCCCCcCCcccccCCCCCCCCCCcch
Q 039267          299 IITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY-VPNRTLLDPDYCPPELYVLPEETPSPPPEPI  377 (502)
Q Consensus       299 ia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  377 (502)
                      |+.||+|||+++|+||||||+|||++.++.+||+|||+++........ ......||+.|+|||++.+            
T Consensus       142 i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------------  209 (307)
T 2nru_A          142 AANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG------------  209 (307)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT------------
T ss_pred             HHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC------------
Confidence            999999999999999999999999999999999999999876543222 2345678999999998854            


Q ss_pred             hhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchh--hHHHHHhhccChHHHHHhhhccCccccccCCchHHH
Q 039267          378 AALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKN--FNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGW  455 (502)
Q Consensus       378 ~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  455 (502)
                                 .++.++||||||+++|||++|..|+......  ..............+...... .........++.+.
T Consensus       210 -----------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~  277 (307)
T 2nru_A          210 -----------EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMY  277 (307)
T ss_dssp             -----------EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCS-SCSCCCHHHHHHHH
T ss_pred             -----------CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccc-cccccchHHHHHHH
Confidence                       1345789999999999999998886543321  111111111111111111100 00112233467889


Q ss_pred             HHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          456 DLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       456 ~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      +++.+||+   .||.+|||+++++++
T Consensus       278 ~li~~cl~---~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          278 SVASQCLH---EKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHTC---SSTTTSCCHHHHHHH
T ss_pred             HHHHHHcC---CCcccCcCHHHHHHH
Confidence            99999999   777999999999864


No 235
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=8.1e-40  Score=329.93  Aligned_cols=270  Identities=15%  Similarity=0.144  Sum_probs=192.3

Q ss_pred             ccccCCEEEEeeeeecCceEEEEEEEecCCcee--eeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          133 NLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVV--EDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       133 ~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~v--AvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .+..++|.+.+.||+|+||.||+|++..+|..+  |+|.++.....                          .....+..
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~--------------------------~~~~~~~~   74 (327)
T 1fvr_A           21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--------------------------DDHRDFAG   74 (327)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------------------------------CHHHH
T ss_pred             cccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccch--------------------------HHHHHHHH
Confidence            356678999999999999999999998888755  77776642110                          00011111


Q ss_pred             HHHHHhhhc-CCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          211 WFNYRLSRA-APETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       211 ~~~~~l~~~-~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      +. ..+..+ .||||+++++++...        +..++||||+++|+|.+++...+.......    ..........+++
T Consensus        75 E~-~~l~~l~~hp~iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~~~~~~~~~~~~~  141 (327)
T 1fvr_A           75 EL-EVLCKLGHHPNIINLLGACEHR--------GYLYLAIEYAPHGNLLDFLRKSRVLETDPA----FAIANSTASTLSS  141 (327)
T ss_dssp             HH-HHHTTCCCCTTBCCEEEEEEET--------TEEEEEECCCTTCBHHHHHHTTCHHHHCHH----HHHHTTBSCSSCH
T ss_pred             HH-HHHHhccCCCchhhhceeeeeC--------CceEEEEecCCCCCHHHHHHhccccccccc----ccccccccccCCH
Confidence            11 234455 799999999998653        469999999999999999986531000000    0000012236899


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEET  369 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  369 (502)
                      ..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  ......+|+.|+|||++.+..  
T Consensus       142 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~--  217 (327)
T 1fvr_A          142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSV--  217 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCE--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc--cccCCCCCccccChhhhcccc--
Confidence            9999999999999999999999999999999999999999999999998543221  223446788999999986533  


Q ss_pred             CCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccccc
Q 039267          370 PSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILD  448 (502)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (502)
                                          ++.++||||||+++|||++ |..|+.............             .......+.
T Consensus       218 --------------------~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~-------------~~~~~~~~~  264 (327)
T 1fvr_A          218 --------------------YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-------------QGYRLEKPL  264 (327)
T ss_dssp             --------------------ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG-------------GTCCCCCCT
T ss_pred             --------------------CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh-------------cCCCCCCCC
Confidence                                3456799999999999998 888875443221111000             011122344


Q ss_pred             CCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          449 LDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       449 ~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ..++++.+|+.+||+   .||.+|||++++++|
T Consensus       265 ~~~~~l~~li~~~l~---~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          265 NCDDEVYDLMRQCWR---EKPYERPSFAQILVS  294 (327)
T ss_dssp             TBCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcc---CChhhCcCHHHHHHH
Confidence            578999999999999   777999999999976


No 236
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=3.3e-39  Score=323.48  Aligned_cols=267  Identities=16%  Similarity=0.164  Sum_probs=192.9

Q ss_pred             cccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          130 GRRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       130 ~~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      ..+++..++|.+.+.||+|+||.||+|++.   ..+|+|+++.....  ....+.+.+|..+                  
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~---~~~avk~~~~~~~~--~~~~~~~~~e~~~------------------   82 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWH---GEVAIRLIDIERDN--EDQLKAFKREVMA------------------   82 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEES---SSEEEEECCCCSCC--CCCCCCCCTTGGG------------------
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEc---CeEEEEEeecCCCC--HHHHHHHHHHHHH------------------
Confidence            467788999999999999999999999874   25889888764321  1111222233333                  


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                            +..+.|+||+++++++...        +..++||||+++++|.+++...+                   ..+++
T Consensus        83 ------l~~l~h~~iv~~~~~~~~~--------~~~~iv~e~~~~~~L~~~l~~~~-------------------~~~~~  129 (319)
T 2y4i_B           83 ------YRQTRHENVVLFMGACMSP--------PHLAIITSLCKGRTLYSVVRDAK-------------------IVLDV  129 (319)
T ss_dssp             ------GTTCCCTTBCCCCEEEECS--------SCEEEECBCCCSEEHHHHTTSSC-------------------CCCCS
T ss_pred             ------HhcCCCCCEeEEEEEEecC--------CceEEEeecccCCcHHHHHHhcC-------------------CCCCH
Confidence                  4445699999999998753        35999999999999999997653                   24788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCC----ccCCCcccCCCCcCCcccccC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGK----NYVPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~----~~~~~~~~gt~~y~aPE~~~~  365 (502)
                      ..++.++.||+.||+|||+++|+||||||+|||++ ++.+||+|||+++......    ........||+.|+|||++..
T Consensus       130 ~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  208 (319)
T 2y4i_B          130 NKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ  208 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhh
Confidence            89999999999999999999999999999999998 7899999999987653221    112234458999999999976


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      .......             ....++.++||||||+++|||++|..|+..............+           ..+. .
T Consensus       209 ~~~~~~~-------------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-----------~~~~-~  263 (319)
T 2y4i_B          209 LSPDTEE-------------DKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG-----------MKPN-L  263 (319)
T ss_dssp             BSCC--C-------------CCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT-----------CCCC-C
T ss_pred             ccccccc-------------cccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC-----------CCCC-C
Confidence            4322111             0234667899999999999999999887654332211111000           1111 1


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .....+.++.+++.+||.   .||++|||++++++.
T Consensus       264 ~~~~~~~~l~~li~~~l~---~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          264 SQIGMGKEISDILLFCWA---FEQEERPTFTKLMDM  296 (319)
T ss_dssp             CCSSCCTTHHHHHHHHHC---SSTTTSCCHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHhc---CChhhCcCHHHHHHH
Confidence            122468899999999999   777999999999863


No 237
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.1e-39  Score=326.01  Aligned_cols=262  Identities=20%  Similarity=0.177  Sum_probs=182.8

Q ss_pred             ccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHH
Q 039267          135 KRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNY  214 (502)
Q Consensus       135 ~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~  214 (502)
                      ..++|++.+.||+|+||.||+|....+|+.||+|++.......                        ......+. ....
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~-~E~~   84 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD------------------------AKARADCI-KEID   84 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC------------------------HHHHHHHH-HHHH
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC------------------------HHHHHHHH-HHHH
Confidence            4457999999999999999999998889999998876532110                        00001111 1223


Q ss_pred             HhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHH
Q 039267          215 RLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQ  294 (502)
Q Consensus       215 ~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  294 (502)
                      .+..+.|+||+++++++...        +..++||||+++|+|.+++.....                ....+++..++.
T Consensus        85 ~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~----------------~~~~~~~~~~~~  140 (310)
T 2wqm_A           85 LLKQLNHPNVIKYYASFIED--------NELNIVLELADAGDLSRMIKHFKK----------------QKRLIPERTVWK  140 (310)
T ss_dssp             HHHTCCCTTBCCEEEEEEET--------TEEEEEEECCCSCBHHHHHHHHHH----------------TTCCCCHHHHHH
T ss_pred             HHHhCCCCCEeeEEEEEEcC--------CcEEEEEecCCCCCHHHHHHHhcc----------------cccCCCHHHHHH
Confidence            45666899999999998763        359999999999999999975310                123578999999


Q ss_pred             HHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          295 ILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       295 i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      ++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..       
T Consensus       141 i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-------  212 (310)
T 2wqm_A          141 YFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENG-------  212 (310)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------------------CCSSCCHHHHTTCC-------
T ss_pred             HHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc-cccccCCCeeEeChHHhCCCC-------
Confidence            999999999999999999999999999999999999999999987654322 233457899999999987543       


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCchHH
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSGRG  454 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  454 (502)
                                     ++.++||||||+++|||++|..|+...............          ............++++
T Consensus       213 ---------------~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l  267 (310)
T 2wqm_A          213 ---------------YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE----------QCDYPPLPSDHYSEEL  267 (310)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH----------TTCSCCCCTTTSCHHH
T ss_pred             ---------------CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh----------cccCCCCcccccCHHH
Confidence                           345679999999999999999887654332222111110          0000011124568899


Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          455 WDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      .+|+.+||+   .||++|||+++++++
T Consensus       268 ~~li~~~l~---~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          268 RQLVNMCIN---PDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcC---CChhhCCCHHHHHHH
Confidence            999999999   777999999999863


No 238
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.3e-39  Score=320.38  Aligned_cols=251  Identities=16%  Similarity=0.217  Sum_probs=185.4

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      .+.+..++|++.+.||+|+||+||+|++  +|+.||+|+++....      .+.+.+|                      
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~------~~~~~~E----------------------   64 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT------AQAFLAE----------------------   64 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--------HHHHHT----------------------
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchhH------HHHHHHH----------------------
Confidence            4567888999999999999999999986  578888887754210      0111111                      


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                        ...+..+.|+||+++++++...       .+..++||||+++|+|.+++...+                  ...+++.
T Consensus        65 --~~~l~~l~h~~iv~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~  117 (278)
T 1byg_A           65 --ASVMTQLRHSNLVQLLGVIVEE-------KGGLYIVTEYMAKGSLVDYLRSRG------------------RSVLGGD  117 (278)
T ss_dssp             --HHHHTTCCCTTBCCEEEEECCC---------CCEEEECCCTTEEHHHHHHHHH------------------HHHCCHH
T ss_pred             --HHHHHhCCCCCEeeEEEEEEcC-------CCceEEEEecCCCCCHHHHHHhcc------------------cccCCHH
Confidence              1235566799999999987653       235899999999999999998653                  1237888


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETP  370 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  370 (502)
                      .+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++......    ....+++.|+|||++.+..   
T Consensus       118 ~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~---  190 (278)
T 1byg_A          118 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKK---  190 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc----cCCCccccccCHHHhCCCC---
Confidence            999999999999999999999999999999999999999999999998654322    2346788999999987533   


Q ss_pred             CCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccC
Q 039267          371 SPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDL  449 (502)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                                         ++.++||||||+++|||++ |..|+..............             .........
T Consensus       191 -------------------~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-------------~~~~~~~~~  238 (278)
T 1byg_A          191 -------------------FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-------------GYKMDAPDG  238 (278)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-------------TCCCCCCTT
T ss_pred             -------------------CCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-------------CCCCCCccc
Confidence                               4456799999999999998 8887654332211111000             112234456


Q ss_pred             CchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          450 DSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       450 ~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      .++++.+++.+||+   .||++|||++++++
T Consensus       239 ~~~~l~~li~~~l~---~~p~~Rps~~~l~~  266 (278)
T 1byg_A          239 CPPAVYEVMKNCWH---LDAAMRPSFLQLRE  266 (278)
T ss_dssp             CCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHhc---CChhhCCCHHHHHH
Confidence            78999999999999   77799999999875


No 239
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=3.2e-40  Score=331.94  Aligned_cols=268  Identities=19%  Similarity=0.159  Sum_probs=194.2

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEe----cCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIV----PKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~----~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      +..+.|++.+.||+|+||+||+|.+.    .+|+.||||+++....                          ......+ 
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~-   80 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG--------------------------PQHRSGW-   80 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC--------------------------HHHHHHH-
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC--------------------------hHHHHHH-
Confidence            44455799999999999999988753    3555666666553210                          0111111 


Q ss_pred             HHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          210 EWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       210 ~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      ..+...+..+.||||+++++++....      ....++||||+++|+|.+++...                     .+++
T Consensus        81 ~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~---------------------~~~~  133 (318)
T 3lxp_A           81 KQEIDILRTLYHEHIIKYKGCCEDAG------AASLQLVMEYVPLGSLRDYLPRH---------------------SIGL  133 (318)
T ss_dssp             HHHHHHHHHCCCTTBCCEEEEEEETT------TTEEEEEECCCTTCBHHHHGGGS---------------------CCCH
T ss_pred             HHHHHHHHhCCCcchhhEEEEEecCC------CceEEEEEecccCCcHHHHHhhC---------------------CCCH
Confidence            12223466677999999999987642      23589999999999999999765                     3788


Q ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCCC
Q 039267          290 LIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLPE  367 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~  367 (502)
                      ..++.++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++........  ......+|+.|+|||++.+..
T Consensus       134 ~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  213 (318)
T 3lxp_A          134 AQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK  213 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCC
Confidence            999999999999999999999999999999999999999999999999987554321  234556788999999997533


Q ss_pred             CCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhcc--ChHHHHHhhhccCccc
Q 039267          368 ETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQY--DLNKWREYTRLRSDFT  445 (502)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  445 (502)
                                            ++.++||||||+++|||++|..|+................  ................
T Consensus       214 ----------------------~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (318)
T 3lxp_A          214 ----------------------FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP  271 (318)
T ss_dssp             ----------------------EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred             ----------------------CCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCC
Confidence                                  3356799999999999999988875544333222111100  1111122222233344


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ....++.++.+|+.+||+   .||++|||++++++
T Consensus       272 ~~~~~~~~l~~li~~~l~---~dP~~Rps~~ell~  303 (318)
T 3lxp_A          272 RPDKCPAEVYHLMKNCWE---TEASFRPTFENLIP  303 (318)
T ss_dssp             CCTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHH
T ss_pred             CCccccHHHHHHHHHHcC---CCcccCcCHHHHHH
Confidence            566789999999999999   77799999999985


No 240
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=6.4e-40  Score=342.28  Aligned_cols=296  Identities=14%  Similarity=0.083  Sum_probs=191.3

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      ....+|..++.||+|+||+||+|++..+|+.||||++....... ....+.+..|..+++.+....       .... ..
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~-~~~~~~~~~E~~~~~~l~~~~-------~~~~-~~  145 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLLRGIK-------NQKQ-AK  145 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCC-------SHHH-HH
T ss_pred             CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc-HHHHHHHHHHHHHHHhhccCC-------CHHH-HH
Confidence            45567999999999999999999999999999999887433211 111222233333333332100       0000 00


Q ss_pred             HHhhhcCCccccccc------cccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcccc
Q 039267          214 YRLSRAAPETCAEFL------GSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKR  287 (502)
Q Consensus       214 ~~l~~~~h~niv~l~------g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  287 (502)
                      .....+....++.+.      ..+....   .......+++|+++ +++|.+++......             ......+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~L~~ll~~l~~~-------------~~~~~~l  208 (413)
T 3dzo_A          146 VHLRFIFPFDLVKDPQKKKMIRVRLDER---DMWVLSRFFLYPRM-QSNLQTFGEVLLSH-------------SSTHKSL  208 (413)
T ss_dssp             HHTCBCCCCEEEECCC------------------CCSEEEEEECC-SEEHHHHHHHHHHH-------------TTTSHHH
T ss_pred             HhcccccchhhcccCCCCccccccCCCc---cccccceEEEeehh-cCCHHHHHHHhhcc-------------cccCCCC
Confidence            000011111111111      1111100   00122467888877 79999999632100             0012357


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCC
Q 039267          288 SALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPE  367 (502)
Q Consensus       288 ~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  367 (502)
                      ++..+..++.||++||+|||+++|+||||||+|||++.++.+||+|||+++.....    .....| +.|||||++....
T Consensus       209 ~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~  283 (413)
T 3dzo_A          209 VHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERM  283 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccc
Confidence            88899999999999999999999999999999999999999999999999875433    234567 9999999994321


Q ss_pred             --CCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccc
Q 039267          368 --ETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       368 --~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                        +..              .-...++.++|||||||++|||++|..|+........                  ....+.
T Consensus       284 ~~~~~--------------~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~------------------~~~~~~  331 (413)
T 3dzo_A          284 LPFGQ--------------HHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG------------------SEWIFR  331 (413)
T ss_dssp             STTGG--------------GCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC------------------SGGGGS
T ss_pred             ccccc--------------ccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh------------------HHHHHh
Confidence              000              0013456788999999999999999998754432110                  000111


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCCCchhHHh
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGGDQAAAVL  495 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~~~~~~~~  495 (502)
                      ....+++++.+|+.+||+   .||++|||+.++++||||+...+...+.+
T Consensus       332 ~~~~~~~~~~~li~~~l~---~dP~~Rpt~~~~l~~~~~~~~~~~~~~~~  378 (413)
T 3dzo_A          332 SCKNIPQPVRALLEGFLR---YPKEDRLLPLQAMETPEYEQLRTELSAAL  378 (413)
T ss_dssp             SCCCCCHHHHHHHHHHTC---SSGGGSCCHHHHTTSHHHHHHHHHHHHHG
T ss_pred             hcccCCHHHHHHHHHHcc---CChhhCcCHHHHHhCHHHHHHHHHHHHHh
Confidence            223568999999999999   77799999999999999997665544443


No 241
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.9e-38  Score=316.07  Aligned_cols=244  Identities=17%  Similarity=0.144  Sum_probs=179.3

Q ss_pred             CCEEEE-eeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          137 TDFVIG-DKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       137 ~~~~~~-~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      ++|.+. +.||+|+||.||+|+...+++.||+|+++...                                ...++....
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------------------------~~~~e~~~~   64 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--------------------------------KARREVELH   64 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH--------------------------------HHHHHHHHH
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccH--------------------------------HHHHHHHHH
Confidence            457776 78999999999999998889899998875310                                111222233


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      .....||||+++++++.....    ..+..++||||+++|+|.+++....                  ...+++..++.+
T Consensus        65 ~~~~~h~~i~~~~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~------------------~~~~~~~~~~~i  122 (299)
T 3m2w_A           65 WRASQCPHIVRIVDVYENLYA----GRKCLLIVMECLDGGELFSRIQDRG------------------DQAFTEREASEI  122 (299)
T ss_dssp             HHHTTSTTBCCEEEEEEEEET----TEEEEEEEECCCCSCBHHHHHHHCT------------------TCCCBHHHHHHH
T ss_pred             HHhccCCCchhHHhhhhhhcC----CCceEEEEEeecCCCcHHHHHHhcc------------------CCCCCHHHHHHH
Confidence            455579999999998865211    1335899999999999999998753                  125889999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEEcc---CCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVLTK---RGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.|++.||+|||+++|+||||||+|||++.   ++.+||+|||+++....                              
T Consensus       123 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~------------------------------  172 (299)
T 3m2w_A          123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG------------------------------  172 (299)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT------------------------------
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc------------------------------
Confidence            999999999999999999999999999998   78999999999975321                              


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                     ..++.++|||||||++|||++|..|+.................      ..........+...++
T Consensus       173 ---------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  231 (299)
T 3m2w_A          173 ---------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR------MGQYEFPNPEWSEVSE  231 (299)
T ss_dssp             ---------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSC------TTCCSSCHHHHTTSCH
T ss_pred             ---------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHh------hccccCCchhcccCCH
Confidence                           0123467999999999999999988754322111000000000      0000001112245789


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCccccCC
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLLGG  488 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~~~  488 (502)
                      ++.+|+.+||+   .||++|||++|+++||||+...
T Consensus       232 ~~~~li~~~l~---~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          232 EVKMLIRNLLK---TEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             HHHHHHHHHTC---SSTTTSCCHHHHHTSHHHHTGG
T ss_pred             HHHHHHHHHcc---cChhhCCCHHHHhcChhhcccc
Confidence            99999999999   7779999999999999998654


No 242
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=8.3e-39  Score=316.09  Aligned_cols=258  Identities=17%  Similarity=0.181  Sum_probs=183.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecC-Cc--eeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPK-NA--VVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEE  210 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~  210 (502)
                      +..++|++.+.||+|+||+||+|++..+ ++  .||+|+++.....                        .......+. 
T Consensus        15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~~~~~-   69 (291)
T 1u46_A           15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS------------------------QPEAMDDFI-   69 (291)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------------------------------CHHHHHHH-
T ss_pred             cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC------------------------CHHHHHHHH-
Confidence            5667899999999999999999987532 22  4677666542110                        001111111 


Q ss_pred             HHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHH
Q 039267          211 WFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSAL  290 (502)
Q Consensus       211 ~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (502)
                      .....+..+.|+||+++++++...         ..++||||+++|+|.+++...+                   ..+++.
T Consensus        70 ~e~~~l~~l~h~~i~~~~~~~~~~---------~~~~v~e~~~~~~L~~~l~~~~-------------------~~~~~~  121 (291)
T 1u46_A           70 REVNAMHSLDHRNLIRLYGVVLTP---------PMKMVTELAPLGSLLDRLRKHQ-------------------GHFLLG  121 (291)
T ss_dssp             HHHHHHHHCCCTTBCCEEEEECSS---------SCEEEEECCTTCBHHHHHHHHG-------------------GGSCHH
T ss_pred             HHHHHHHhCCCCCcccEEEEEccC---------CceeeEecccCCCHHHHHHhcc-------------------CCcCHH
Confidence            122335666899999999988642         3899999999999999998653                   257899


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc--CCCcccCCCCcCCcccccCCCC
Q 039267          291 IIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY--VPNRTLLDPDYCPPELYVLPEE  368 (502)
Q Consensus       291 ~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~  368 (502)
                      .+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++........  ......+|..|+|||++.+.. 
T Consensus       122 ~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-  200 (291)
T 1u46_A          122 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT-  200 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCE-
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCC-
Confidence            99999999999999999999999999999999999999999999999876544321  233456788999999986533 


Q ss_pred             CCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccc
Q 039267          369 TPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTIL  447 (502)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                                           ++.++||||||+++|||++ |..|+..........            ............
T Consensus       201 ---------------------~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~------------~~~~~~~~~~~~  247 (291)
T 1u46_A          201 ---------------------FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH------------KIDKEGERLPRP  247 (291)
T ss_dssp             ---------------------EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH------------HHHTSCCCCCCC
T ss_pred             ---------------------CCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH------------HHHccCCCCCCC
Confidence                                 3456799999999999999 888875443221110            111111223344


Q ss_pred             cCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          448 DLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       448 ~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      ...+.++.+++.+||+   .||.+|||+++++++
T Consensus       248 ~~~~~~l~~li~~~l~---~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          248 EDCPQDIYNVMVQCWA---HKPEDRPTFVALRDF  278 (291)
T ss_dssp             TTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             cCcCHHHHHHHHHHcc---CCcccCcCHHHHHHH
Confidence            5678999999999999   777999999999973


No 243
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.3e-39  Score=327.74  Aligned_cols=263  Identities=19%  Similarity=0.238  Sum_probs=188.5

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|.+.+.||+|+||.||+|++  +|+.||+|++.....                           .  ....+.....
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---------------------------~--~~~~e~~~~~   89 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE---------------------------R--SWFREAEIYQ   89 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGGH---------------------------H--HHHHHHHHHH
T ss_pred             cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchhH---------------------------H--HHHHHHHHHH
Confidence            35799999999999999999986  588888887753110                           0  0111222222


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      ...+.||||+++++++......    ....++||||+++|+|.+++...                     .+++..++.+
T Consensus        90 ~~~l~h~ni~~~~~~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~---------------------~~~~~~~~~i  144 (342)
T 1b6c_B           90 TVMLRHENILGFIAADNKDNGT----WTQLWLVSDYHEHGSLFDYLNRY---------------------TVTVEGMIKL  144 (342)
T ss_dssp             HSCCCCTTBCCEEEEEECCCSS----CCCEEEEECCCTTCBHHHHHHHC---------------------CBCHHHHHHH
T ss_pred             HhhcCCCcEEEEEeeecccCCc----cceeEEEEeecCCCcHHHHHhcc---------------------CccHHHHHHH
Confidence            3336899999999998765321    12589999999999999999764                     4788999999


Q ss_pred             HHHHHHHHHHHH--------HcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---CCCcccCCCCcCCccccc
Q 039267          296 LRQIITSLKKIH--------DTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCPPELYV  364 (502)
Q Consensus       296 ~~qia~gL~yLH--------~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~  364 (502)
                      +.|++.||+|||        +.+|+||||||+|||++.++.+||+|||+++........   ......||+.|+|||++.
T Consensus       145 ~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  224 (342)
T 1b6c_B          145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD  224 (342)
T ss_dssp             HHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhc
Confidence            999999999999        899999999999999999999999999999876544322   234567999999999997


Q ss_pred             CCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhC----------CCCCCCcch---hhHHHHHhhccCh
Q 039267          365 LPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIP----------TLRSISGLK---NFNMEIKTAQYDL  431 (502)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg----------~~p~~~~~~---~~~~~~~~~~~~~  431 (502)
                      +......                ..++.++|||||||++|||++|          ..|+.....   ..........   
T Consensus       225 ~~~~~~~----------------~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---  285 (342)
T 1b6c_B          225 DSINMKH----------------FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC---  285 (342)
T ss_dssp             SCCCTTC----------------HHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT---
T ss_pred             ccccccc----------------cccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHH---
Confidence            6432210                1122578999999999999998          555543211   1111111000   


Q ss_pred             HHHHHhhhccCccc---cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          432 NKWREYTRLRSDFT---ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       432 ~~~~~~~~~~~~~~---~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                           ....++..+   .....++.+.+|+.+||+   .||++|||++++++|
T Consensus       286 -----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~---~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          286 -----EQKLRPNIPNRWQSCEALRVMAKIMRECWY---ANGAARLTALRIKKT  330 (342)
T ss_dssp             -----TSCCCCCCCGGGGTSHHHHHHHHHHHHHCC---SSGGGSCCHHHHHHH
T ss_pred             -----HHHhCCCCcccccchhHHHHHHHHHHHHhc---cChhhCCCHHHHHHH
Confidence                 000011111   011234678899999999   777999999999976


No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=4.4e-40  Score=359.06  Aligned_cols=277  Identities=16%  Similarity=0.173  Sum_probs=194.7

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||+||+|.+..+|+.||||++.....                          ......+. .+...+
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~--------------------------~~~~~~~~-~Ei~iL   66 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS--------------------------PKNRERWC-LEIQIM   66 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC--------------------------HHHHHHHH-HHHHHH
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC--------------------------HHHHHHHH-HHHHHH
Confidence            679999999999999999999888899999988764211                          00001111 112335


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++.....  ...++..++||||+++|+|.+++....                 ....+++..++.++
T Consensus        67 ~~L~HpnIV~l~~v~~~~~~--~~~~~~~~LVmEy~~ggsL~~~L~~~~-----------------~~~~lse~~i~~I~  127 (676)
T 3qa8_A           67 KKLNHPNVVSAREVPDGLQK--LAPNDLPLLAMEYCEGGDLRKYLNQFE-----------------NCCGLKEGPIRTLL  127 (676)
T ss_dssp             HHCCBTTBCCEEECCTTTCC--CCTTSSCCCEEECCSSCBHHHHHHSSS-----------------CTTCCCSSHHHHHH
T ss_pred             HhCCCCCCCceeeeeccccc--ccCCCeEEEEEEeCCCCCHHHHHHhcc-----------------cCCCCCHHHHHHHH
Confidence            66689999999998755221  122456899999999999999998653                 11247788899999


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCc---EEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQ---IKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~---~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .|++.||+|||+.||+||||||+|||++.++.   +||+|||+++......  ......||+.|+|||++.+..      
T Consensus       128 ~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~------  199 (676)
T 3qa8_A          128 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKK------  199 (676)
T ss_dssp             HHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSC------
T ss_pred             HHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc--ccccccCCcccCChHHhccCC------
Confidence            99999999999999999999999999997764   9999999999765443  234567999999999997644      


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHH------HHHhhhc----cCc
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNK------WREYTRL----RSD  443 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~----~~~  443 (502)
                                      ++.++|||||||++|||++|..|+....................      .......    ...
T Consensus       200 ----------------~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p  263 (676)
T 3qa8_A          200 ----------------YTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTP  263 (676)
T ss_dssp             ----------------CSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCS
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCc
Confidence                            34567999999999999999998865533221000000000000      0000000    001


Q ss_pred             cccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          444 FTILDLDSGRGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       444 ~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      .......++.+.+|+.+||.   +||++|||++++++||||+.
T Consensus       264 ~~l~~~ls~~L~dLI~~mL~---~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          264 NHLSGILAGKLERWLQCMLM---WHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CCCCGGGHHHHHHHHHHHSC---SSCC---CCTTCCCCTTHHH
T ss_pred             hhhchhhhHHHHHHHHHHcc---CCHhhCcCHHHHhcCHHHHH
Confidence            11233467889999999999   78899999999999999985


No 245
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.6e-38  Score=337.83  Aligned_cols=256  Identities=19%  Similarity=0.145  Sum_probs=186.0

Q ss_pred             cCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHH
Q 039267          136 RTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYR  215 (502)
Q Consensus       136 ~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~  215 (502)
                      .++|++.++||+|+||.||+|++..+++.||||++......      ..+..|..                        .
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~E~~------------------------i   55 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------PQLLYESK------------------------I   55 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------CCHHHHHH------------------------H
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------HHHHHHHH------------------------H
Confidence            46799999999999999999999889999999987653210      11111111                        1


Q ss_pred             hhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHH
Q 039267          216 LSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQI  295 (502)
Q Consensus       216 l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  295 (502)
                      +..+.|++.+..+..+...       .+..+|||||+ +++|.+++....                   ..+++..++.|
T Consensus        56 l~~L~~~~~i~~i~~~~~~-------~~~~~lvme~~-g~sL~~ll~~~~-------------------~~l~~~~~~~i  108 (483)
T 3sv0_A           56 YRILQGGTGIPNVRWFGVE-------GDYNVLVMDLL-GPSLEDLFNFCS-------------------RKLSLKTVLML  108 (483)
T ss_dssp             HHHTTTSTTCCCEEEEEEE-------TTEEEEEEECC-CCBHHHHHHHTT-------------------TCCCHHHHHHH
T ss_pred             HHHhcCCCCCCeEEEEEee-------CCEEEEEEECC-CCCHHHHHHhhc-------------------CCCCHHHHHHH
Confidence            3333454444444433322       34689999999 999999998643                   25889999999


Q ss_pred             HHHHHHHHHHHHHcCCeeccCCCCcEEE---ccCCcEEEeeccccccccCCCcc------CCCcccCCCCcCCcccccCC
Q 039267          296 LRQIITSLKKIHDTGIVHRDVKPANLVL---TKRGQIKLIDFGAATDLRIGKNY------VPNRTLLDPDYCPPELYVLP  366 (502)
Q Consensus       296 ~~qia~gL~yLH~~~IiHrDlKp~NILl---~~~~~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~  366 (502)
                      +.||+.||+|||+++|+||||||+||||   +.++.+||+|||+++........      ......||+.|+|||++.+.
T Consensus       109 ~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~  188 (483)
T 3sv0_A          109 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGI  188 (483)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCC
Confidence            9999999999999999999999999999   68899999999999987654321      22356799999999999764


Q ss_pred             CCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH-HHHhhccChHHHHHhhhccCccc
Q 039267          367 EETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM-EIKTAQYDLNKWREYTRLRSDFT  445 (502)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      .                      ++.++|||||||+||||++|..|+......... .+....       ..........
T Consensus       189 ~----------------------~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~-------~~~~~~~~~~  239 (483)
T 3sv0_A          189 E----------------------QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS-------EKKVATSIEA  239 (483)
T ss_dssp             C----------------------CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH-------HHHHHSCHHH
T ss_pred             C----------------------CChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh-------hccccccHHH
Confidence            4                      445779999999999999999987654322111 111000       0000000111


Q ss_pred             cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          446 ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       446 ~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                      ....++.++.+|+.+||+   .||++||++++|++
T Consensus       240 l~~~~p~~l~~li~~cl~---~dP~~RPs~~el~~  271 (483)
T 3sv0_A          240 LCRGYPTEFASYFHYCRS---LRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHTTSCHHHHHHHHHHHT---CCTTCCCCHHHHHH
T ss_pred             HhcCCcHHHHHHHHHHhc---CChhhCcCHHHHHH
Confidence            224568999999999999   77799999998764


No 246
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=9.8e-39  Score=351.77  Aligned_cols=258  Identities=15%  Similarity=0.183  Sum_probs=188.1

Q ss_pred             ccccccCCEEEEeeeeecCceEEEEEEEecCC---ceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchh
Q 039267          131 RRNLKRTDFVIGDKLGEGSFGVVYSGAIVPKN---AVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGD  207 (502)
Q Consensus       131 ~~~~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~---~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~  207 (502)
                      .+++..++|.+++.||+|+||.||+|++..++   ..||+|.++.                         .... .....
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~-------------------------~~~~-~~~~~  437 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-------------------------CTSD-SVREK  437 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSS-------------------------TTCH-HHHHH
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecc-------------------------cCCH-HHHHH
Confidence            34567789999999999999999999986433   3455554432                         1110 00111


Q ss_pred             hHHHHHHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCcccc
Q 039267          208 YEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKR  287 (502)
Q Consensus       208 ~~~~~~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  287 (502)
                      + ......+..+.||||+++++++..         +..++||||+++|+|.+++...+                   ..+
T Consensus       438 ~-~~E~~~l~~l~HpnIv~l~~~~~~---------~~~~lv~E~~~~g~L~~~l~~~~-------------------~~l  488 (656)
T 2j0j_A          438 F-LQEALTMRQFDHPHIVKLIGVITE---------NPVWIIMELCTLGELRSFLQVRK-------------------FSL  488 (656)
T ss_dssp             H-HHHHHHHHHCCCTTBCCEEEEECS---------SSCEEEEECCTTCBHHHHHHHTT-------------------TTC
T ss_pred             H-HHHHHHHHhCCCCCCCeEEEEEec---------CceEEEEEcCCCCcHHHHHHhcc-------------------CCC
Confidence            1 112234666789999999998742         35899999999999999998653                   247


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCC
Q 039267          288 SALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPE  367 (502)
Q Consensus       288 ~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  367 (502)
                      ++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++..............+|+.|||||++.+..
T Consensus       489 ~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  568 (656)
T 2j0j_A          489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR  568 (656)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCC
Confidence            88999999999999999999999999999999999999999999999999987655444444566788999999986533


Q ss_pred             CCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh-CCCCCCCcchhhHHHHHhhccChHHHHHhhhccCcccc
Q 039267          368 ETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI-PTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTI  446 (502)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (502)
                                            ++.++|||||||++|||++ |..|+.............             .......
T Consensus       569 ----------------------~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~-------------~~~~~~~  613 (656)
T 2j0j_A          569 ----------------------FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-------------NGERLPM  613 (656)
T ss_dssp             ----------------------CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-------------HTCCCCC
T ss_pred             ----------------------CCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-------------cCCCCCC
Confidence                                  4457799999999999997 777765433221110000             0112234


Q ss_pred             ccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          447 LDLDSGRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       447 ~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      +..++.++.+|+.+||+   .||.+|||++++++.
T Consensus       614 ~~~~~~~l~~li~~~l~---~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          614 PPNCPPTLYSLMTKCWA---YDPSRRPRFTELKAQ  645 (656)
T ss_dssp             CTTCCHHHHHHHHHHTC---SSGGGSCCHHHHHHH
T ss_pred             CccccHHHHHHHHHHcC---CChhHCcCHHHHHHH
Confidence            55678999999999999   777999999999853


No 247
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.8e-41  Score=336.96  Aligned_cols=258  Identities=19%  Similarity=0.247  Sum_probs=170.7

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ++|.+.+.||+|+||.||+|++  +|+.||||++.....                             .....+......
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-----------------------------~~~~~e~~~~~~   51 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-----------------------------RSWFREAEIYQT   51 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-TTH-----------------------------HHHHHHHHHHTS
T ss_pred             ceeeehhhccCCCCeEEEEEEE--cCcceEEEEecccch-----------------------------hhHHHHHHHHHH
Confidence            4688999999999999999975  588888887653110                             001112222233


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.||||+++++++......    ....++||||+++|+|.+++...                     .+++..+..++
T Consensus        52 ~~~~h~~i~~~~~~~~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~---------------------~~~~~~~~~~~  106 (303)
T 3gxj_A           52 VMLRHENILGFIAADNKDNGT----WTQLWLVSDYHEHGSLFDYLNRY---------------------TVTVEGMIKLA  106 (303)
T ss_dssp             TTCCC-CBCCEEEEEEEECSS----SEEEEEEEECCTTCCHHHHHHHC---------------------CBCC-CHHHHC
T ss_pred             HhccCcceeeeeeecccCCCc----cceeEEEEeccCCCCHHHHHhcc---------------------CcchHHHHHHH
Confidence            347899999999998765421    12589999999999999999765                     35667788999


Q ss_pred             HHHHHHHHHHH--------HcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCcc---CCCcccCCCCcCCcccccC
Q 039267          297 RQIITSLKKIH--------DTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNY---VPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       297 ~qia~gL~yLH--------~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~  365 (502)
                      .|++.||+|||        +.+|+||||||+|||++.++.+||+|||+++........   ......||+.|+|||++.+
T Consensus       107 ~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  186 (303)
T 3gxj_A          107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  186 (303)
T ss_dssp             -CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcC
Confidence            99999999999        999999999999999999999999999999876544322   2234479999999999976


Q ss_pred             CCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhC----------CCCCCCcch------hhHHHHHhhcc
Q 039267          366 PEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIP----------TLRSISGLK------NFNMEIKTAQY  429 (502)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg----------~~p~~~~~~------~~~~~~~~~~~  429 (502)
                      ......                ..++.++|||||||++|||++|          ..|+.....      .........  
T Consensus       187 ~~~~~~----------------~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--  248 (303)
T 3gxj_A          187 SINMKH----------------FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ--  248 (303)
T ss_dssp             CSCTTC----------------HHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTS--
T ss_pred             cccccc----------------cccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHh--
Confidence            432211                1233578999999999999998          444432211      011110000  


Q ss_pred             ChHHHHHhhhccCccc---cccCCchHHHHHHHHhhhccCCCCCCCcCHHHHhc
Q 039267          430 DLNKWREYTRLRSDFT---ILDLDSGRGWDLATKLISERGFLRRGRLSAAAALR  480 (502)
Q Consensus       430 ~~~~~~~~~~~~~~~~---~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl~  480 (502)
                               ..++..+   .....++.+.+|+.+||+   .||.+|||++++++
T Consensus       249 ---------~~~~~~~~~~~~~~~~~~l~~li~~cl~---~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          249 ---------KLRPNIPNRWQSCEALRVMAKIMRECWY---ANGAARLTALRIKK  290 (303)
T ss_dssp             ---------CCCCCCCGGGGSSHHHHHHHHHHHTTCC---SSGGGSCCHHHHHH
T ss_pred             ---------hcCCCccccccchhhHHHHHHHHHHHhc---cCcccCCCHHHHHH
Confidence                     0111111   011234578999999999   77799999999986


No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=3.2e-39  Score=326.93  Aligned_cols=265  Identities=19%  Similarity=0.204  Sum_probs=179.1

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCC----CccccccccceeeEeeecccccCCcccchhhH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNG----KSLELDGRFKEKVILKKVKIGVQGAEEFGDYE  209 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~----~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~  209 (502)
                      +..++|.+.+.||+|+||+||+|++  +|+.||||++.......    .....+.+..|..+++.++             
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-------------   81 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELS-------------   81 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHH-------------
T ss_pred             cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHH-------------
Confidence            4456788999999999999999986  78999999998753210    0000011112222222221             


Q ss_pred             HHHHHHhhhc---C-----------------CccccccccccccccCC-----ccccCCceEEEEeecCCCcHHHHHHhc
Q 039267          210 EWFNYRLSRA---A-----------------PETCAEFLGSFVADKTN-----SQFTKGGKWLVWKFEGDRTLADYMKDR  264 (502)
Q Consensus       210 ~~~~~~l~~~---~-----------------h~niv~l~g~~~~~~~~-----~~~~~~~~~LV~e~~~~gsL~~~l~~~  264 (502)
                           .+...   .                 ||||++++++|......     .....+..+|||||+++|++.+.+.+.
T Consensus        82 -----~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~  156 (336)
T 2vuw_A           82 -----LLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK  156 (336)
T ss_dssp             -----HGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT
T ss_pred             -----HhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc
Confidence                 01111   2                 55555555555431100     011245799999999999877776432


Q ss_pred             CCCCcchhhhccccccCCCccccCHHHHHHHHHHHHHHHHHHH-HcCCeeccCCCCcEEEccCC----------------
Q 039267          265 TFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQIITSLKKIH-DTGIVHRDVKPANLVLTKRG----------------  327 (502)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~IiHrDlKp~NILl~~~~----------------  327 (502)
                                           .+++..++.++.||+.||+||| +++|+||||||+|||++.++                
T Consensus       157 ---------------------~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~  215 (336)
T 2vuw_A          157 ---------------------LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIP  215 (336)
T ss_dssp             ---------------------CCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEE
T ss_pred             ---------------------CCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcccccc
Confidence                                 4789999999999999999999 99999999999999999987                


Q ss_pred             ----cEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHH-
Q 039267          328 ----QIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIV-  402 (502)
Q Consensus       328 ----~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvv-  402 (502)
                          .+||+|||+|+....      ....||+.|||||++.+..                       +.++||||+|++ 
T Consensus       216 ~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~aPE~~~g~~-----------------------~~~~Diwsl~~~~  266 (336)
T 2vuw_A          216 SCGLQVSIIDYTLSRLERD------GIVVFCDVSMDEDLFTGDG-----------------------DYQFDIYRLMKKE  266 (336)
T ss_dssp             CTTEEEEECCCTTCBEEET------TEEECCCCTTCSGGGCCCS-----------------------SHHHHHHHHHHHH
T ss_pred             CCCceEEEeeccccEecCC------CcEEEeecccChhhhcCCC-----------------------ccceehhhhhCCC
Confidence                999999999997653      2457999999999997532                       346799998777 


Q ss_pred             HHHHHhCCCCCCCcc--hhhH-HHHHhhccChHHHHHhhhccCccccccCCchHHHHHHHHhhhccCCCCCCCcCHHHHh
Q 039267          403 LLQMAIPTLRSISGL--KNFN-MEIKTAQYDLNKWREYTRLRSDFTILDLDSGRGWDLATKLISERGFLRRGRLSAAAAL  479 (502)
Q Consensus       403 L~elltg~~p~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~~~~dP~~Rps~~evl  479 (502)
                      .+++++|..|+....  .... .........         .......++..++++++||.+||+   .|     |++|+|
T Consensus       267 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~s~~~~dli~~~L~---~d-----sa~e~l  329 (336)
T 2vuw_A          267 NNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK---------TKCNTPAMKQIKRKIQEFHRTMLN---FS-----SATDLL  329 (336)
T ss_dssp             HTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS---------SCCCSHHHHHHHHHHHHHHHHGGG---SS-----SHHHHH
T ss_pred             CcccccccCCCcchhhhhHHHHhhhhhhccC---------cccchhhhhhcCHHHHHHHHHHhc---cC-----CHHHHH
Confidence            677777777652210  0000 001000000         001111233468899999999999   55     999999


Q ss_pred             -cCCccc
Q 039267          480 -RHPYFL  485 (502)
Q Consensus       480 -~HP~f~  485 (502)
                       +||||+
T Consensus       330 ~~Hp~f~  336 (336)
T 2vuw_A          330 CQHSLFK  336 (336)
T ss_dssp             HHCGGGC
T ss_pred             hcCCCcC
Confidence             999995


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.9e-37  Score=343.48  Aligned_cols=249  Identities=17%  Similarity=0.192  Sum_probs=183.8

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEec-CCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVP-KNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWF  212 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~  212 (502)
                      +..++|++.+.||+|+||+||+|++.. +|+.||||++.....                           .........+
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~~~E  129 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD---------------------------AEAQAMAMAE  129 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC---------------------------HHHHHHHHHH
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC---------------------------HHHHHHHHHH
Confidence            345789999999999999999999875 678888887654211                           0000111112


Q ss_pred             HHHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHH
Q 039267          213 NYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALII  292 (502)
Q Consensus       213 ~~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (502)
                      ...+..+.||||+++++++.......   ....+|||||+++++|.+++..                      .+++..+
T Consensus       130 ~~~l~~l~hp~iv~~~~~~~~~~~~~---~~~~~lv~E~~~g~~L~~~~~~----------------------~l~~~~~  184 (681)
T 2pzi_A          130 RQFLAEVVHPSIVQIFNFVEHTDRHG---DPVGYIVMEYVGGQSLKRSKGQ----------------------KLPVAEA  184 (681)
T ss_dssp             HGGGGGCCCTTBCCEEEEEEEECTTS---CEEEEEEEECCCCEECC----C----------------------CCCHHHH
T ss_pred             HHHHHhcCCCCcCeEeeeEeecCCCC---CceeEEEEEeCCCCcHHHHHhC----------------------CCCHHHH
Confidence            23355667999999999987654210   1126999999999999887653                      4789999


Q ss_pred             HHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCC
Q 039267          293 KQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSP  372 (502)
Q Consensus       293 ~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  372 (502)
                      +.++.||+.||+|||++||+||||||+|||++.+ .+||+|||+++.....     ....||+.|||||++.+.      
T Consensus       185 ~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-----~~~~gt~~y~aPE~~~~~------  252 (681)
T 2pzi_A          185 IAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-----GYLYGTPGFQAPEIVRTG------  252 (681)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC-----SCCCCCTTTSCTTHHHHC------
T ss_pred             HHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC-----CccCCCccccCHHHHcCC------
Confidence            9999999999999999999999999999999886 9999999999876532     355799999999998642      


Q ss_pred             CCcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHHHHHhhccChHHHHHhhhccCccccccCCch
Q 039267          373 PPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNMEIKTAQYDLNKWREYTRLRSDFTILDLDSG  452 (502)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  452 (502)
                                       ++.++|||||||+++||++|..|+......        ....            .......++
T Consensus       253 -----------------~~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------~~~~------------~~~~~~~~~  295 (681)
T 2pzi_A          253 -----------------PTVATDIYTVGRTLAALTLDLPTRNGRYVD--------GLPE------------DDPVLKTYD  295 (681)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------SCCT------------TCHHHHHCH
T ss_pred             -----------------CCCceehhhhHHHHHHHHhCCCCCcccccc--------cccc------------cccccccCH
Confidence                             235789999999999999986654321110        0000            000011357


Q ss_pred             HHHHHHHHhhhccCCCCCCCcCHHHHhcCCcccc
Q 039267          453 RGWDLATKLISERGFLRRGRLSAAAALRHPYFLL  486 (502)
Q Consensus       453 ~~~~Li~~~L~~~~~dP~~Rps~~evl~HP~f~~  486 (502)
                      .+.+|+.+||+   .||++||+..+.+.|+|+..
T Consensus       296 ~l~~li~~~l~---~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          296 SYGRLLRRAID---PDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHHHHHHHHTC---SSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHhhhcc---CChhhCCCHHHHHHHHHHHH
Confidence            78899999999   77799999999999988763


No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=2.5e-35  Score=292.44  Aligned_cols=230  Identities=12%  Similarity=0.009  Sum_probs=168.4

Q ss_pred             cccCCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHH
Q 039267          134 LKRTDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFN  213 (502)
Q Consensus       134 ~~~~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~  213 (502)
                      +..++|++.+.||+|+||.||+|++..+|+.||+|++.......                        ......+.+ ..
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~~-e~   82 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP------------------------DDVLQETLS-RT   82 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC------------------------HHHHHHHHH-HH
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC------------------------HHHHHHHHH-HH
Confidence            44467999999999999999999998889999998887532210                        001111111 12


Q ss_pred             HHhhhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHH
Q 039267          214 YRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIK  293 (502)
Q Consensus       214 ~~l~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (502)
                      ..+..+.|+||+++++++...        +..++||||+++++|.+++...                      .....+.
T Consensus        83 ~~l~~l~hp~iv~~~~~~~~~--------~~~~lv~e~~~g~~L~~~l~~~----------------------~~~~~~~  132 (286)
T 3uqc_A           83 LRLSRIDKPGVARVLDVVHTR--------AGGLVVAEWIRGGSLQEVADTS----------------------PSPVGAI  132 (286)
T ss_dssp             HHHHTCCCTTBCCEEEEEEET--------TEEEEEEECCCEEEHHHHHTTC----------------------CCHHHHH
T ss_pred             HHHhcCCCCCcceeeEEEEEC--------CcEEEEEEecCCCCHHHHHhcC----------------------CChHHHH
Confidence            335677899999999998763        4699999999999999999542                      2344678


Q ss_pred             HHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCC
Q 039267          294 QILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPP  373 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  373 (502)
                      .++.|++.||+|||++||+||||||+|||++.++.+||+++|                     |++|             
T Consensus       133 ~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~---------------------~~~~-------------  178 (286)
T 3uqc_A          133 RAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA---------------------TMPD-------------  178 (286)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC---------------------CCTT-------------
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc---------------------ccCC-------------
Confidence            899999999999999999999999999999999999998543                     3332             


Q ss_pred             CcchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCCCCCcchhhHH--HHHhhccChHHHHHhhhccCccccccCCc
Q 039267          374 PEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSISGLKNFNM--EIKTAQYDLNKWREYTRLRSDFTILDLDS  451 (502)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  451 (502)
                                      ++.++|||||||++|||++|..|+.........  ..+........         .......++
T Consensus       179 ----------------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  233 (286)
T 3uqc_A          179 ----------------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIE---------PADIDRDIP  233 (286)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCC---------HHHHCTTSC
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCC---------hhhcccCCC
Confidence                            224679999999999999998887544321100  00000000000         011234578


Q ss_pred             hHHHHHHHHhhhccCCCCCCCcCHHHHhcC
Q 039267          452 GRGWDLATKLISERGFLRRGRLSAAAALRH  481 (502)
Q Consensus       452 ~~~~~Li~~~L~~~~~dP~~Rps~~evl~H  481 (502)
                      +++.+|+.+||+   .||++| |++|+++.
T Consensus       234 ~~l~~li~~~l~---~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          234 FQISAVAARSVQ---GDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHHHHHHHHHHC---TTSSCC-CHHHHHHH
T ss_pred             HHHHHHHHHHcc---cCCccC-CHHHHHHH
Confidence            999999999999   777999 99999874


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96  E-value=3.9e-31  Score=286.45  Aligned_cols=194  Identities=17%  Similarity=0.132  Sum_probs=121.8

Q ss_pred             eeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHhhhc-CC
Q 039267          143 DKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRLSRA-AP  221 (502)
Q Consensus       143 ~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l~~~-~h  221 (502)
                      ...+.|++|.+..++....|..+|+|++.+.......                 .....+.....+.++... +.++ .|
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~-----------------~~~~~~~~~~~~~~E~~~-l~~~~~~  301 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGIL-----------------TAEESQRNKYELHNEIKF-LTQPPAG  301 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCS-----------------CHHHHHHHHHHHHHHHHH-HHSCCTT
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccc-----------------hhhhhHHHHHHHHHHHHH-HHhcCCC
Confidence            3467777887777776677888888877653221100                 000001111122222222 4444 79


Q ss_pred             ccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHHHHH
Q 039267          222 ETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQIIT  301 (502)
Q Consensus       222 ~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~  301 (502)
                      +||+++++++..        ++..||||||++|++|.++|...+                    .+++   .+|+.||+.
T Consensus       302 ~~i~~~~~~~ed--------~~~~yLVMEyv~G~~L~d~i~~~~--------------------~l~~---~~I~~QIl~  350 (569)
T 4azs_A          302 FDAPAVLAHGEN--------AQSGWLVMEKLPGRLLSDMLAAGE--------------------EIDR---EKILGSLLR  350 (569)
T ss_dssp             CCCCCEEEEEEC--------SSEEEEEEECCCSEEHHHHHHTTC--------------------CCCH---HHHHHHHHH
T ss_pred             CCeeEEEEEEEE--------CCEEEEEEecCCCCcHHHHHHhCC--------------------CCCH---HHHHHHHHH
Confidence            999999999876        446999999999999999998764                    3444   358999999


Q ss_pred             HHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcchhhcc
Q 039267          302 SLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAALL  381 (502)
Q Consensus       302 gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~  381 (502)
                      ||+|||++|||||||||+|||++.+|.+||+|||+|+....+.. .....+||+.|||||++.+.               
T Consensus       351 AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~-~~~t~vGTp~YmAPE~l~g~---------------  414 (569)
T 4azs_A          351 SLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS-WPTNLVQSFFVFVNELFAEN---------------  414 (569)
T ss_dssp             HHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C-CSHHHHHHHHHHHHHHC------------------
T ss_pred             HHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc-cccCceechhhccHHHhCCC---------------
Confidence            99999999999999999999999999999999999997654332 34556899999999999752               


Q ss_pred             chhhhccCCCCcccHHHHHHHHHHHHhC
Q 039267          382 SPILWQLNSPDLFDMYSAGIVLLQMAIP  409 (502)
Q Consensus       382 ~~~~~~~~~~~k~DVwSlGvvL~elltg  409 (502)
                              ++.++|+||+|+++++|.++
T Consensus       415 --------~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          415 --------KSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             ----------------------CCCCTT
T ss_pred             --------CCCcccccccccchhhhccc
Confidence                    22356999999999888653


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90  E-value=2.3e-25  Score=239.77  Aligned_cols=192  Identities=13%  Similarity=0.075  Sum_probs=130.6

Q ss_pred             EEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHhhhcC
Q 039267          141 IGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRLSRAA  220 (502)
Q Consensus       141 ~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l~~~~  220 (502)
                      ..+.||+|+||+||+|.  ..+..+|+|.......                    ................+...+.++.
T Consensus       340 ~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~--------------------~~~~~~~~~~~~~~~~E~~il~~l~  397 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGY--------------------RDERLDENIRKSRTAREARYLALVK  397 (540)
T ss_dssp             --------CCEEEEEEE--CSSCEEEEEEECCCTT--------------------SCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccc--------------------cchhhhhHHHHHHHHHHHHHHHhcC
Confidence            35689999999999995  4677788876543111                    0000000000011122223466678


Q ss_pred             CccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHHHH
Q 039267          221 PETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQII  300 (502)
Q Consensus       221 h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia  300 (502)
                      ||||+.+..++..        .+..+|||||+++++|.+++..                            +..++.|++
T Consensus       398 h~nIv~~~~~~~~--------~~~~~lVmE~~~ggsL~~~l~~----------------------------~~~i~~qi~  441 (540)
T 3en9_A          398 DFGIPAPYIFDVD--------LDNKRIMMSYINGKLAKDVIED----------------------------NLDIAYKIG  441 (540)
T ss_dssp             GGTCCCCCEEEEE--------TTTTEEEEECCCSEEHHHHSTT----------------------------CTHHHHHHH
T ss_pred             CCCcCceEEEEEe--------CCccEEEEECCCCCCHHHHHHH----------------------------HHHHHHHHH
Confidence            9999966555543        3358999999999999999874                            357999999


Q ss_pred             HHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccC------CCcccCCCCcCCcccccCCCCCCCCCC
Q 039267          301 TSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYV------PNRTLLDPDYCPPELYVLPEETPSPPP  374 (502)
Q Consensus       301 ~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~  374 (502)
                      .||+|||+++|+||||||+|||++.  .+||+|||+|+.........      .....||+.|||||++....       
T Consensus       442 ~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~-------  512 (540)
T 3en9_A          442 EIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFL-------  512 (540)
T ss_dssp             HHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH-------
T ss_pred             HHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHH-------
Confidence            9999999999999999999999998  99999999999875432211      23567999999999997411       


Q ss_pred             cchhhccchhhhccCCCCcccHHHHHHHHHHHHhCCCC
Q 039267          375 EPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLR  412 (502)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~elltg~~p  412 (502)
                                   ..|+.++|+||..+-.++.+.+..+
T Consensus       513 -------------~~Y~~~~d~ws~vl~~l~~v~~r~r  537 (540)
T 3en9_A          513 -------------EGYKSVYDRWEIILELMKDVERRAR  537 (540)
T ss_dssp             -------------HHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred             -------------HHHHHHHhHHHHHHHHHHHHHhccc
Confidence                         2344567999999888887765443


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88  E-value=2.7e-23  Score=205.47  Aligned_cols=164  Identities=17%  Similarity=0.152  Sum_probs=109.6

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      ..|.+++.||+|+||.||+|++ .+|+.||+|+++.......     ........+   ...+... .......+. ..+
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~-----~~~~~~~~~---~~~w~~~-~~~~~~~E~-~~l  158 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFK-----KVKEKRDYG---DLHFSVL-AIRSARNEF-RAL  158 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC-----------CCCC----------CHHHH-HHHHHHHHH-HHH
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchh-----hhhhhhhhc---chhhHHH-HHHHHHHHH-HHH
Confidence            3467889999999999999999 8899999999875322100     000000000   0000000 000111111 123


Q ss_pred             hhcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHH
Q 039267          217 SRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQIL  296 (502)
Q Consensus       217 ~~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  296 (502)
                      ..+.  | +.+.+++..         +..++||||+++|+|.+ +...                          ....++
T Consensus       159 ~~l~--~-~~v~~~~~~---------~~~~lvmE~~~g~~L~~-l~~~--------------------------~~~~i~  199 (282)
T 1zar_A          159 QKLQ--G-LAVPKVYAW---------EGNAVLMELIDAKELYR-VRVE--------------------------NPDEVL  199 (282)
T ss_dssp             HHTT--T-SSSCCEEEE---------ETTEEEEECCCCEEGGG-CCCS--------------------------CHHHHH
T ss_pred             Hhcc--C-CCcCeEEec---------cceEEEEEecCCCcHHH-cchh--------------------------hHHHHH
Confidence            3333  4 666665432         24799999999999988 4211                          134699


Q ss_pred             HHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccccccCCCccCCCcccCCCCcCCcccccC
Q 039267          297 RQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVL  365 (502)
Q Consensus       297 ~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~  365 (502)
                      .|++.||+|||++||+||||||+|||++ ++.+||+|||+|+.              +..++|||++..
T Consensus       200 ~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~r  253 (282)
T 1zar_A          200 DMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE--------------VGEEGWREILER  253 (282)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence            9999999999999999999999999999 99999999999974              345789998864


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80  E-value=2e-19  Score=175.33  Aligned_cols=161  Identities=17%  Similarity=0.221  Sum_probs=99.7

Q ss_pred             EEEEeeeeecCceEEEEEEEecCCce--eeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHh
Q 039267          139 FVIGDKLGEGSFGVVYSGAIVPKNAV--VEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRL  216 (502)
Q Consensus       139 ~~~~~~IG~G~fG~Vy~g~~~~~~~~--vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l  216 (502)
                      |.+.+.||+|+||.||+|.+..+|+.  ||||+++.....-..  .........-.+.+...  ...........+...+
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~E~~~l  124 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDK--MDEYLYGDERFDMRRIS--PKEKVFIWTEKEFRNL  124 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC---------GGGTTTCTTSCC------CHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhh--HHHhhcccchhhhhccC--hHHHHHHHHHHHHHHH
Confidence            78899999999999999998778998  999997653211000  00000000000000000  0000000111122234


Q ss_pred             hhcCCccc--cccccccccccCCccccCCceEEEEeecCC-C----cHHHHHHhcCCCCcchhhhccccccCCCccccCH
Q 039267          217 SRAAPETC--AEFLGSFVADKTNSQFTKGGKWLVWKFEGD-R----TLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSA  289 (502)
Q Consensus       217 ~~~~h~ni--v~l~g~~~~~~~~~~~~~~~~~LV~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (502)
                      .++.|+++  ...+..            +..+|||||+++ |    +|.++...                       .++
T Consensus       125 ~~l~~~~i~~p~~~~~------------~~~~lVmE~~g~~g~~~~~L~~~~~~-----------------------~~~  169 (258)
T 1zth_A          125 ERAKEAGVSVPQPYTY------------MKNVLLMEFIGEDELPAPTLVELGRE-----------------------LKE  169 (258)
T ss_dssp             HHHHHTTCCCCCEEEE------------ETTEEEEECCEETTEECCBHHHHGGG-----------------------GGG
T ss_pred             HHHHhCCCCCCeEEEc------------CCCEEEEEecCCCCCccccHHHHhhc-----------------------cCh
Confidence            45555543  222221            147999999942 4    66665432                       123


Q ss_pred             HHHHHHHHHHHHHHHHHH-HcCCeeccCCCCcEEEccCCcEEEeeccccccc
Q 039267          290 LIIKQILRQIITSLKKIH-DTGIVHRDVKPANLVLTKRGQIKLIDFGAATDL  340 (502)
Q Consensus       290 ~~~~~i~~qia~gL~yLH-~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~  340 (502)
                      ..+..++.|++.||+||| +.||+||||||+|||++.  .++|+|||+|...
T Consensus       170 ~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          170 LDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            346789999999999999 999999999999999988  9999999999864


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.71  E-value=1.4e-17  Score=170.24  Aligned_cols=159  Identities=10%  Similarity=0.079  Sum_probs=100.9

Q ss_pred             EEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHhhh
Q 039267          139 FVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRLSR  218 (502)
Q Consensus       139 ~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l~~  218 (502)
                      |.+++.||+|+||.||+|.. .+|+.||||+++.....-     .....+...++...    . .....    .......
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sf-----r~v~~~r~~~~~~~----~-~~~~~----~~rl~A~  161 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISF-----RTVKANRDYLRNRS----T-GSWMY----LSRLAAI  161 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECC-----CCCC--CEECTTSC----H-HHHHH----HHHHHHH
T ss_pred             EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccH-----HHHHHHHHHHHhhc----c-ccHHH----HHHHHHH
Confidence            89999999999999999987 579999999987532210     00001111111000    0 00000    0001112


Q ss_pred             cCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHH
Q 039267          219 AAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQ  298 (502)
Q Consensus       219 ~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  298 (502)
                      ..|+|+.++....+.....  ......+|||||+++++|.++...                          .....++.|
T Consensus       162 kE~~nL~rL~~~gv~vp~p--~~~~~~~LVME~i~G~~L~~l~~~--------------------------~~~~~l~~q  213 (397)
T 4gyi_A          162 KEFAFMKALYEEGFPVPEP--IAQSRHTIVMSLVDALPMRQVSSV--------------------------PDPASLYAD  213 (397)
T ss_dssp             HHHHHHHHHHHTTCSCCCE--EEEETTEEEEECCSCEEGGGCCCC--------------------------SCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCee--eeccCceEEEEecCCccHhhhccc--------------------------HHHHHHHHH
Confidence            2466666665443321110  001124799999998888654321                          123568899


Q ss_pred             HHHHHHHHHHcCCeeccCCCCcEEEccCC----------cEEEeeccccccc
Q 039267          299 IITSLKKIHDTGIVHRDVKPANLVLTKRG----------QIKLIDFGAATDL  340 (502)
Q Consensus       299 ia~gL~yLH~~~IiHrDlKp~NILl~~~~----------~~kL~DFGla~~~  340 (502)
                      |+.+|.|||+.|||||||||.|||++.++          .+.|+||+-+...
T Consensus       214 ll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          214 LIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             HHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             HHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            99999999999999999999999998877          3899999987654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.03  E-value=9e-10  Score=106.39  Aligned_cols=140  Identities=12%  Similarity=0.054  Sum_probs=94.1

Q ss_pred             CEEEEeeeeecCceEEEEEEEecCCceeeeeeeeccCCCCCccccccccceeeEeeecccccCCcccchhhHHHHHHHhh
Q 039267          138 DFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLKRGRGNGKSLELDGRFKEKVILKKVKIGVQGAEEFGDYEEWFNYRLS  217 (502)
Q Consensus       138 ~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~e~~alK~l~~~~~~~~~~~~~~~~~~~~l~  217 (502)
                      .|.+...+|.|+++.||++..  .+..+++|+......                        .....+..+.+.. ..+.
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~------------------------~~~~~~~~E~~~l-~~l~   67 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK------------------------GTTYDVEREKDMM-LWLE   67 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT------------------------TSTTCHHHHHHHH-HHHT
T ss_pred             cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC------------------------CCHHHHHHHHHHH-HHHh
Confidence            578888999999999999863  356666766553210                        0000111111111 1121


Q ss_pred             hcCCccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHH
Q 039267          218 RAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILR  297 (502)
Q Consensus       218 ~~~h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  297 (502)
                        .+..+.++++.+..        .+..++||||++|.+|.+.+...                         .....++.
T Consensus        68 --~~~~vP~v~~~~~~--------~~~~~lv~e~i~G~~l~~~~~~~-------------------------~~~~~~~~  112 (263)
T 3tm0_A           68 --GKLPVPKVLHFERH--------DGWSNLLMSEADGVLCSEEYEDE-------------------------QSPEKIIE  112 (263)
T ss_dssp             --TTSCCCCEEEEEEE--------TTEEEEEEECCSSEEHHHHCCTT-------------------------TCHHHHHH
T ss_pred             --cCCCCCeEEEEEec--------CCceEEEEEecCCeehhhccCCc-------------------------ccHHHHHH
Confidence              25667777776643        34689999999999998763211                         11246888


Q ss_pred             HHHHHHHHHHH-----------------------------------------------------------cCCeeccCCC
Q 039267          298 QIITSLKKIHD-----------------------------------------------------------TGIVHRDVKP  318 (502)
Q Consensus       298 qia~gL~yLH~-----------------------------------------------------------~~IiHrDlKp  318 (502)
                      +++++|+.||+                                                           ..++|+|++|
T Consensus       113 ~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~  192 (263)
T 3tm0_A          113 LYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGD  192 (263)
T ss_dssp             HHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCT
T ss_pred             HHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCc
Confidence            99999999998                                                           4589999999


Q ss_pred             CcEEEccCCcEEEeecccccc
Q 039267          319 ANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       319 ~NILl~~~~~~kL~DFGla~~  339 (502)
                      .|||++.+..+.|+||+.+..
T Consensus       193 ~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          193 SNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TSEEEETTEEEEECCCTTCEE
T ss_pred             CcEEEECCcEEEEEEchhccc
Confidence            999998766667999998764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.92  E-value=7.9e-10  Score=106.03  Aligned_cols=29  Identities=21%  Similarity=0.255  Sum_probs=25.9

Q ss_pred             CeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          311 IVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       311 IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      ++|+|++|.|||++.++.+.|+|||.+..
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            99999999999998776677999999864


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85  E-value=7.1e-09  Score=105.03  Aligned_cols=92  Identities=20%  Similarity=0.256  Sum_probs=70.1

Q ss_pred             CccccccccccccccCCccccCCceEEEEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHHHH
Q 039267          221 PETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQII  300 (502)
Q Consensus       221 h~niv~l~g~~~~~~~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia  300 (502)
                      +..+.++++.+.....     .|..++||||++|.++.+..                      ...++......++.+++
T Consensus        97 ~vpvP~~~~~~~~~~~-----~g~~~~vme~v~G~~l~~~~----------------------~~~l~~~~~~~~~~~l~  149 (359)
T 3dxp_A           97 DVPVAKMYALCEDESV-----IGRAFYIMEFVSGRVLWDQS----------------------LPGMSPAERTAIYDEMN  149 (359)
T ss_dssp             SSCCCCEEEEECCTTT-----TSSCEEEEECCCCBCCCCTT----------------------CTTCCHHHHHHHHHHHH
T ss_pred             CCCCCcEEEECCCCCc-----cCCeEEEEEecCCeecCCCc----------------------cccCCHHHHHHHHHHHH
Confidence            4567777776654321     24689999999887764311                      11356778889999999


Q ss_pred             HHHHHHHH----------------------------------------------------------cCCeeccCCCCcEE
Q 039267          301 TSLKKIHD----------------------------------------------------------TGIVHRDVKPANLV  322 (502)
Q Consensus       301 ~gL~yLH~----------------------------------------------------------~~IiHrDlKp~NIL  322 (502)
                      +.|+.||+                                                          ..++|+|+++.|||
T Consensus       150 ~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil  229 (359)
T 3dxp_A          150 RVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLM  229 (359)
T ss_dssp             HHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEE
T ss_pred             HHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEE
Confidence            99999997                                                          35899999999999


Q ss_pred             EccCCc--EEEeecccccc
Q 039267          323 LTKRGQ--IKLIDFGAATD  339 (502)
Q Consensus       323 l~~~~~--~kL~DFGla~~  339 (502)
                      ++.++.  +.|.||+.+..
T Consensus       230 ~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          230 FHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             ECSSSSCEEEECCCTTCEE
T ss_pred             EeCCCCcEEEEECcccccc
Confidence            997753  68999999875


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.41  E-value=1.3e-07  Score=93.48  Aligned_cols=31  Identities=23%  Similarity=0.432  Sum_probs=26.6

Q ss_pred             CCeeccCCCCcEEEcc--CCcEEEeeccccccc
Q 039267          310 GIVHRDVKPANLVLTK--RGQIKLIDFGAATDL  340 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~--~~~~kL~DFGla~~~  340 (502)
                      .++|+|++|.||+++.  +..+.|+||+.+...
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence            3799999999999998  456889999998753


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.19  E-value=1.7e-06  Score=86.13  Aligned_cols=30  Identities=27%  Similarity=0.468  Sum_probs=26.3

Q ss_pred             CeeccCCCCcEEEccCCcEEEeeccccccc
Q 039267          311 IVHRDVKPANLVLTKRGQIKLIDFGAATDL  340 (502)
Q Consensus       311 IiHrDlKp~NILl~~~~~~kL~DFGla~~~  340 (502)
                      ++|+|++|.|||++.+..+.|+||+.+...
T Consensus       209 ~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          209 LVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             EECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             eeECCCCCCcEEEECCceEEEECCcccccC
Confidence            499999999999998766799999998753


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.90  E-value=1.2e-05  Score=77.52  Aligned_cols=29  Identities=28%  Similarity=0.371  Sum_probs=26.0

Q ss_pred             CeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          311 IVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       311 IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      ++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECccccc
Confidence            79999999999999877778999998864


No 262
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.74  E-value=0.00021  Score=70.47  Aligned_cols=30  Identities=27%  Similarity=0.539  Sum_probs=25.5

Q ss_pred             CCeeccCCCCcEEEcc---CCc-EEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTK---RGQ-IKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~---~~~-~kL~DFGla~~  339 (502)
                      .++|+|+++.|||++.   ++. +.|+||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            4699999999999987   455 58999998875


No 263
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.60  E-value=0.0003  Score=71.77  Aligned_cols=30  Identities=20%  Similarity=0.319  Sum_probs=25.9

Q ss_pred             cCCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          309 TGIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       309 ~~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      ..++|+|+++.||+++.+ .++|.||..+..
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            468999999999999876 489999987764


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.43  E-value=0.00054  Score=68.61  Aligned_cols=31  Identities=10%  Similarity=0.216  Sum_probs=26.4

Q ss_pred             cCCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          309 TGIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       309 ~~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      ..++|+|+++.|||++.+..+.|+||+.+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            4689999999999999654578999998874


No 265
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.43  E-value=0.00047  Score=69.71  Aligned_cols=31  Identities=23%  Similarity=0.253  Sum_probs=27.3

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeeccccccc
Q 039267          310 GIVHRDVKPANLVLTKRGQIKLIDFGAATDL  340 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~~~~kL~DFGla~~~  340 (502)
                      .++|+|+++.|||++.++.+.|+||+.+...
T Consensus       214 ~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g  244 (362)
T 3ovc_A          214 HLVHADFGSNNVLTDNGRITAVIDWSEAMFG  244 (362)
T ss_dssp             EEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred             EEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence            5799999999999987777889999998753


No 266
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.27  E-value=0.0038  Score=60.90  Aligned_cols=27  Identities=26%  Similarity=0.295  Sum_probs=23.5

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeeccccc
Q 039267          310 GIVHRDVKPANLVLTKRGQIKLIDFGAAT  338 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~~~~kL~DFGla~  338 (502)
                      .++|+|+.+.||+++. +.+.|.|| .+.
T Consensus       189 ~l~HgD~~~~N~l~~~-~~~~~iD~-~~~  215 (288)
T 3d1u_A          189 ARIHGDLWNGNVLWQD-DGAVVIDP-AAH  215 (288)
T ss_dssp             EEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred             cceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence            5899999999999988 45889999 665


No 267
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.26  E-value=0.003  Score=62.27  Aligned_cols=43  Identities=19%  Similarity=0.279  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHH-------------cCCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          297 RQIITSLKKIHD-------------TGIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       297 ~qia~gL~yLH~-------------~~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      .++..++++|++             ..++|+|+++.|||++.++.+.|+||+.+..
T Consensus       197 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          197 EDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            345556677753             4799999999999998888999999998764


No 268
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.86  E-value=0.005  Score=63.21  Aligned_cols=32  Identities=16%  Similarity=0.264  Sum_probs=28.1

Q ss_pred             HcCCeeccCCCCcEEEccCCcEEEeeccccccc
Q 039267          308 DTGIVHRDVKPANLVLTKRGQIKLIDFGAATDL  340 (502)
Q Consensus       308 ~~~IiHrDlKp~NILl~~~~~~kL~DFGla~~~  340 (502)
                      ...++|+|+++.|||++.++ ++|+||+.+...
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            45799999999999998876 999999998753


No 269
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.42  E-value=0.0022  Score=62.70  Aligned_cols=29  Identities=14%  Similarity=0.184  Sum_probs=25.1

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      .++|+|+.+.||+ ..++.+.|+||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            4899999999999 5667889999998864


No 270
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.23  E-value=0.068  Score=49.62  Aligned_cols=98  Identities=15%  Similarity=0.082  Sum_probs=63.6

Q ss_pred             CcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHHHHHHHHHHHH-cCCeeccCCCCcEEEccCCcEEEee
Q 039267          255 RTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQIITSLKKIHD-TGIVHRDVKPANLVLTKRGQIKLID  333 (502)
Q Consensus       255 gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~IiHrDlKp~NILl~~~~~~kL~D  333 (502)
                      -||.+.|...+                   .++++.+++.++.|.+.+|.-+-. ..-..+=+-|..|++..+|.+...+
T Consensus        33 vSL~eIL~~~~-------------------~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~   93 (229)
T 2yle_A           33 LSLEEILRLYN-------------------QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP   93 (229)
T ss_dssp             EEHHHHHHHHT-------------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred             ccHHHHHHHcC-------------------CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc
Confidence            37999998765                   378999999999999999877632 1111223456899999999998875


Q ss_pred             ccccccccCCCccCCCcccCCCCcCCcccccCCCCCCCCCCcchhhccchhhhccCCCCcccHHHHHHHHHHHHh
Q 039267          334 FGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAI  408 (502)
Q Consensus       334 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~DVwSlGvvL~ellt  408 (502)
                       +.+.             .....+.|||...                       ...+++.=|||||+++|.-+-
T Consensus        94 -~~s~-------------~~~~~~~~pe~~~-----------------------~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           94 -AADD-------------AGEPPPVAGKLGY-----------------------SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -C-------------------------CCSS-----------------------SSSCHHHHHHHHHHHHHHHHT
T ss_pred             -cccc-------------ccccCCCChhhcc-----------------------ccchHHHHHHHHHHHHHHHhh
Confidence             2211             0122456777652                       122356689999999999874


No 271
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=95.74  E-value=0.055  Score=52.82  Aligned_cols=41  Identities=24%  Similarity=0.355  Sum_probs=31.7

Q ss_pred             HHHHHHHHHH-------cCCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          299 IITSLKKIHD-------TGIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       299 ia~gL~yLH~-------~~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      +...++++++       .+++|+|+++.|||++.+..+.|+||+.+..
T Consensus       170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            4445555553       3689999999999998876668999998764


No 272
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=95.73  E-value=0.13  Score=49.47  Aligned_cols=34  Identities=9%  Similarity=0.059  Sum_probs=26.6

Q ss_pred             CCEEEEeeeeecCceEEEEEEEecCCceeeeeeee
Q 039267          137 TDFVIGDKLGEGSFGVVYSGAIVPKNAVVEDRGLK  171 (502)
Q Consensus       137 ~~~~~~~~IG~G~fG~Vy~g~~~~~~~~vAvK~~~  171 (502)
                      .++.-.+.+|.|..+.||+.+. .+|+.+.+|+..
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~   48 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALP   48 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECC
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeC
Confidence            4566778999999999999986 567777777644


No 273
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=94.75  E-value=0.041  Score=57.22  Aligned_cols=15  Identities=27%  Similarity=0.410  Sum_probs=14.1

Q ss_pred             CCeeccCCCCcEEEc
Q 039267          310 GIVHRDVKPANLVLT  324 (502)
Q Consensus       310 ~IiHrDlKp~NILl~  324 (502)
                      .++|+|+.+.|||++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            589999999999998


No 274
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=93.64  E-value=0.56  Score=45.94  Aligned_cols=25  Identities=16%  Similarity=0.166  Sum_probs=22.7

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeecc
Q 039267          310 GIVHRDVKPANLVLTKRGQIKLIDFG  335 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~~~~kL~DFG  335 (502)
                      .++|+|+.+.|++++.++ +.|.||.
T Consensus       208 ~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          208 SILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             EEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             eeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            589999999999999887 8899984


No 275
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.39  E-value=0.099  Score=53.19  Aligned_cols=29  Identities=28%  Similarity=0.572  Sum_probs=25.2

Q ss_pred             CeeccCCCCcEEE------ccCCcEEEeecccccc
Q 039267          311 IVHRDVKPANLVL------TKRGQIKLIDFGAATD  339 (502)
Q Consensus       311 IiHrDlKp~NILl------~~~~~~kL~DFGla~~  339 (502)
                      ++|+|+.+.|||+      +++..++++||..|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            5799999999999      4567899999999875


No 276
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=88.80  E-value=0.15  Score=50.16  Aligned_cols=32  Identities=31%  Similarity=0.401  Sum_probs=27.7

Q ss_pred             cCCeeccCCCCcEEEccC----CcEEEeeccccccc
Q 039267          309 TGIVHRDVKPANLVLTKR----GQIKLIDFGAATDL  340 (502)
Q Consensus       309 ~~IiHrDlKp~NILl~~~----~~~kL~DFGla~~~  340 (502)
                      ..++|+|+.+.|||++.+    +.+.|+||+.+...
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            369999999999999874    68999999988753


No 277
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=88.44  E-value=0.25  Score=48.18  Aligned_cols=28  Identities=18%  Similarity=0.291  Sum_probs=24.9

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      .++|+|+++.|||++ + .+.|+||+.+..
T Consensus       196 ~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          196 LRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             EECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            579999999999998 5 899999998764


No 278
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=85.66  E-value=0.37  Score=47.68  Aligned_cols=30  Identities=20%  Similarity=0.401  Sum_probs=27.5

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      .++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            589999999999999888999999988775


No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=85.43  E-value=0.64  Score=46.27  Aligned_cols=29  Identities=28%  Similarity=0.456  Sum_probs=24.6

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      .++|+|+++.|||++.+. +.|+||..+..
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            589999999999998654 89999998764


No 280
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=78.32  E-value=0.61  Score=47.80  Aligned_cols=30  Identities=33%  Similarity=0.535  Sum_probs=24.8

Q ss_pred             CCeeccCCCCcEEEccC----------------------------CcEEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTKR----------------------------GQIKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~----------------------------~~~kL~DFGla~~  339 (502)
                      .++|+|+.+.|||++.+                            +.+.|+||..|..
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~  307 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY  307 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence            58999999999999875                            6789999988764


No 281
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=75.72  E-value=1.1  Score=45.27  Aligned_cols=30  Identities=23%  Similarity=0.470  Sum_probs=27.0

Q ss_pred             CCeeccCCCCcEEEccC----CcEEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTKR----GQIKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~----~~~kL~DFGla~~  339 (502)
                      .++|+|+.+.|||++.+    +.+.|+||..|..
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            58999999999999876    7899999998874


No 282
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=73.66  E-value=1.2  Score=45.12  Aligned_cols=30  Identities=27%  Similarity=0.444  Sum_probs=26.9

Q ss_pred             CCeeccCCCCcEEEccC------CcEEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTKR------GQIKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~------~~~kL~DFGla~~  339 (502)
                      .++|+|+.+.|||++.+      +.+.|+||..|..
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence            58999999999999887      7899999998864


No 283
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=69.59  E-value=0.57  Score=48.61  Aligned_cols=25  Identities=16%  Similarity=0.190  Sum_probs=12.2

Q ss_pred             EEEeeeeecCceEEEEEEEecCCceeee
Q 039267          140 VIGDKLGEGSFGVVYSGAIVPKNAVVED  167 (502)
Q Consensus       140 ~~~~~IG~G~fG~Vy~g~~~~~~~~vAv  167 (502)
                      .+.+.||   ||.||+|.+..+..+|||
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav  169 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLK  169 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGG
T ss_pred             cccccCC---chhhhcccccccCCchhh
Confidence            3456676   999999999766678888


No 284
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=65.85  E-value=18  Score=39.09  Aligned_cols=84  Identities=18%  Similarity=0.248  Sum_probs=50.6

Q ss_pred             EEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHHHHH--HHHHHHHcCCeeccCCCCcEEEcc
Q 039267          248 VWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQIIT--SLKKIHDTGIVHRDVKPANLVLTK  325 (502)
Q Consensus       248 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~--gL~yLH~~~IiHrDlKp~NILl~~  325 (502)
                      +.|+.++-+|.+++.+.+   .+..++.........+.......+..+++.+|-  -+.|+=.-    +|=+++||||+.
T Consensus       490 LIE~V~s~tl~~i~~~~~---~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGl----GDRH~~NILid~  562 (696)
T 2x6h_A          490 FLQYVDSCTVAEVLAREG---NIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGV----GDRHLDNLLLTT  562 (696)
T ss_dssp             EEECCCCEEHHHHHHHSS---SHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTC----CCCCTTTEEECT
T ss_pred             eeeeCCCccHHHHHHhcC---hHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHccC----CCCCCcceEEeC
Confidence            457777778888887654   233333222222212222223445556555542  23343333    588999999999


Q ss_pred             CCcEEEeeccccc
Q 039267          326 RGQIKLIDFGAAT  338 (502)
Q Consensus       326 ~~~~kL~DFGla~  338 (502)
                      +|.+.=+|||.+-
T Consensus       563 tG~v~HIDFG~~f  575 (696)
T 2x6h_A          563 NGKLFHIDFGYIL  575 (696)
T ss_dssp             TSCEEECCCCSCT
T ss_pred             CCCEEEEeehhhh
Confidence            9999999999874


No 285
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=63.44  E-value=7.8  Score=35.67  Aligned_cols=50  Identities=14%  Similarity=0.151  Sum_probs=38.6

Q ss_pred             cCHHHHHHHHHHHHHHHH-HHHHcCCeeccCCCCcEEEccCCcEEEeeccccc
Q 039267          287 RSALIIKQILRQIITSLK-KIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAAT  338 (502)
Q Consensus       287 l~~~~~~~i~~qia~gL~-yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~  338 (502)
                      ++....++++.+|+.-.. ++  ..-+|--|+|+||++|.++.++|.-.|+-.
T Consensus        82 ~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~~~p~i~hRGi~~  132 (219)
T 4ano_A           82 TTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRALEPFFLHVGVKE  132 (219)
T ss_dssp             SCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTTCCEEESCCEETT
T ss_pred             cCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCCCcEEEEEcCCcc
Confidence            566777788888776555 44  345777899999999999999999888643


No 286
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=62.53  E-value=2.7  Score=42.96  Aligned_cols=29  Identities=24%  Similarity=0.481  Sum_probs=26.3

Q ss_pred             CCeeccCCCCcEEEccCCcEEEeecccccc
Q 039267          310 GIVHRDVKPANLVLTKRGQIKLIDFGAATD  339 (502)
Q Consensus       310 ~IiHrDlKp~NILl~~~~~~kL~DFGla~~  339 (502)
                      .++|+|+.+.||+ +.++.+.|+||..|..
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            4799999999999 7888999999999874


No 287
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=45.17  E-value=2e+02  Score=30.57  Aligned_cols=84  Identities=19%  Similarity=0.265  Sum_probs=50.0

Q ss_pred             EEeecCCCcHHHHHHhcCCCCcchhhhccccccCCCccccCHHHHHHHHHHHHH--HHHHHHHcCCeeccCCCCcEEEcc
Q 039267          248 VWKFEGDRTLADYMKDRTFPFNLETYMFGRVLEGEDSTKRSALIIKQILRQIIT--SLKKIHDTGIVHRDVKPANLVLTK  325 (502)
Q Consensus       248 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~--gL~yLH~~~IiHrDlKp~NILl~~  325 (502)
                      +.|+.++-++.+.+...+   .+..++..............+..+..+++.+|-  -+.|+=.-    +|=+++||||+.
T Consensus       416 lIE~V~~~tl~~il~~~~---~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi----gDRH~~NILld~  488 (614)
T 3ls8_A          416 FMQFIQSVPVAEVLDTEG---SIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV----GDRHLDNLLLTK  488 (614)
T ss_dssp             EEECCCCEEHHHHHHHTS---SHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----CCCCTTSEEECT
T ss_pred             eEEEeCCccHHHHHHccC---hHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----cCCCCcceeEcC
Confidence            468888777777776532   122222111111111112335555666666543  34444433    488899999999


Q ss_pred             CCcEEEeeccccc
Q 039267          326 RGQIKLIDFGAAT  338 (502)
Q Consensus       326 ~~~~kL~DFGla~  338 (502)
                      +|++.=+|||.+-
T Consensus       489 tG~v~HIDFG~~f  501 (614)
T 3ls8_A          489 TGKLFHIDFGYIL  501 (614)
T ss_dssp             TSCEEECCCSSCT
T ss_pred             CCCEeeeehHHhh
Confidence            9999999999874


No 288
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=40.26  E-value=10  Score=34.75  Aligned_cols=51  Identities=14%  Similarity=-0.028  Sum_probs=40.7

Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCCeeccCCCCcEEEccCCcEEEeeccccc
Q 039267          286 KRSALIIKQILRQIITSLKKIHDTGIVHRDVKPANLVLTKRGQIKLIDFGAAT  338 (502)
Q Consensus       286 ~l~~~~~~~i~~qia~gL~yLH~~~IiHrDlKp~NILl~~~~~~kL~DFGla~  338 (502)
                      .++....++++.+|+.-..+++  .=+|--|+|+||+++.++.+++.-.|+-.
T Consensus        77 ~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~~~~~p~i~~RGik~  127 (215)
T 4ann_A           77 SFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFTRDGLPIAKTRGLQN  127 (215)
T ss_dssp             GSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEECTTSCEEESCCEETT
T ss_pred             hcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEcCCCCEEEEEccCcc
Confidence            4567788889999888775443  34677899999999999999999887643


No 289
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=31.40  E-value=32  Score=26.46  Aligned_cols=44  Identities=30%  Similarity=0.372  Sum_probs=31.8

Q ss_pred             HHHHHHhhhccCCCCCCCcCHHHHh-----cCCccccCCC------chhHHhhhcccC
Q 039267          455 WDLATKLISERGFLRRGRLSAAAAL-----RHPYFLLGGD------QAAAVLSRLSLT  501 (502)
Q Consensus       455 ~~Li~~~L~~~~~dP~~Rps~~evl-----~HP~f~~~~~------~~~~~~~~l~~~  501 (502)
                      ..||...+..-|   ++|+|..||.     +.|||+..++      +...+=.-|+|+
T Consensus        11 ~~LI~~Ai~~sp---~~~ltL~eIY~~i~~~fpyy~~~~~~~s~~gWqNSIRHNLSln   65 (85)
T 3bpy_A           11 AELISQAIESAP---EKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNLSLH   65 (85)
T ss_dssp             HHHHHHHHHHST---TSCBCHHHHHHHHHHHCGGGTTCTTCCTTSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCC---cCCccHHHHHHHHHHhCcchhcCccCccCCCcchhhhhhccHh
Confidence            488999999444   9999999986     5699997653      445555555554


No 290
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=30.27  E-value=35  Score=27.98  Aligned_cols=45  Identities=31%  Similarity=0.299  Sum_probs=32.1

Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHh-----cCCccccCC------CchhHHhhhcccC
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAAL-----RHPYFLLGG------DQAAAVLSRLSLT  501 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl-----~HP~f~~~~------~~~~~~~~~l~~~  501 (502)
                      -..||...+.   --|++|+|..||.     +.|||+..+      .+...+=.-|+|+
T Consensus        16 Ya~LI~~AI~---~sp~~~LTL~eIY~~I~~~fPyyr~~~d~~s~~gWqNSIRHNLSln   71 (117)
T 3coa_C           16 YADLITKAIE---SSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRHNLSLH   71 (117)
T ss_dssp             HHHHHHHHHH---TSTTSCBCHHHHHHHHHHHCGGGTTCCSHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHH---hCCCCCccHHHHHHHHHHhCcccccCCCCcccccchhccchheecc
Confidence            3489999999   5559999999976     469999775      3334444555544


No 291
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=26.38  E-value=24  Score=35.20  Aligned_cols=18  Identities=17%  Similarity=0.303  Sum_probs=14.2

Q ss_pred             HHHHHHHHHHHHHHHcCC
Q 039267          294 QILRQIITSLKKIHDTGI  311 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~I  311 (502)
                      .+..++++.|+-||+..+
T Consensus       146 ~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          146 VLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             HHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHhCCCC
Confidence            466789999999998643


No 292
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=25.54  E-value=53  Score=26.56  Aligned_cols=45  Identities=29%  Similarity=0.334  Sum_probs=32.9

Q ss_pred             HHHHHHHhhhccCCCCCCCcCHHHHh-----cCCccccCCC------chhHHhhhcccC
Q 039267          454 GWDLATKLISERGFLRRGRLSAAAAL-----RHPYFLLGGD------QAAAVLSRLSLT  501 (502)
Q Consensus       454 ~~~Li~~~L~~~~~dP~~Rps~~evl-----~HP~f~~~~~------~~~~~~~~l~~~  501 (502)
                      -..||...+..-|   ++|+|..||.     +.|||+..++      +...+=.-|+|+
T Consensus        29 Y~~LI~~AI~~sp---~~~LtL~eIY~~I~~~fPyyr~~~~~~s~~gWqNSIRHNLSln   84 (110)
T 3l2c_A           29 YAELISQAIESAP---EKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNLSLH   84 (110)
T ss_dssp             HHHHHHHHHHHST---TSCBCHHHHHHHHHHHCGGGTTCTTCCTTSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCC---ccCcCHHHHHHHHHHhCchhhcCccccCCCCcccchhhhccHh
Confidence            4489999999555   9999999987     4699997643      445555555554


No 293
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=25.16  E-value=29  Score=23.16  Aligned_cols=12  Identities=8%  Similarity=0.019  Sum_probs=5.3

Q ss_pred             HHhhhheeecCC
Q 039267           95 GGLTWIYLTARP  106 (502)
Q Consensus        95 ~~~~~~~~~~r~  106 (502)
                      ++++|+|+++|+
T Consensus        28 ~~~~~~~~RRr~   39 (44)
T 2ks1_B           28 ALGIGLFMRRRH   39 (44)
T ss_dssp             HHHHHHHHHTTT
T ss_pred             HHHHHHHhhhhH
Confidence            333444444443


No 294
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=25.02  E-value=56  Score=33.03  Aligned_cols=18  Identities=11%  Similarity=0.215  Sum_probs=14.1

Q ss_pred             HHHHHHHHHHHHHHHcCC
Q 039267          294 QILRQIITSLKKIHDTGI  311 (502)
Q Consensus       294 ~i~~qia~gL~yLH~~~I  311 (502)
                      .++.++++.|+-||+..+
T Consensus       166 ~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          166 HICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             HHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHHHhcCch
Confidence            367789999999997543


No 295
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=23.44  E-value=3.2e+02  Score=25.35  Aligned_cols=16  Identities=25%  Similarity=0.382  Sum_probs=11.9

Q ss_pred             CCceEEEEeecCCCcH
Q 039267          242 KGGKWLVWKFEGDRTL  257 (502)
Q Consensus       242 ~~~~~LV~e~~~~gsL  257 (502)
                      .|..++||++++|.++
T Consensus        99 ~g~~~~l~~~i~G~~~  114 (328)
T 1zyl_A           99 QGFYFAVFPSVGGRQF  114 (328)
T ss_dssp             TTEEEEEEECCCCEEC
T ss_pred             CCEEEEEEEecCCCCC
Confidence            4567899999976543


No 296
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=23.25  E-value=48  Score=32.28  Aligned_cols=17  Identities=6%  Similarity=0.112  Sum_probs=9.7

Q ss_pred             EeeeeecCceEEEEEEE
Q 039267          142 GDKLGEGSFGVVYSGAI  158 (502)
Q Consensus       142 ~~~IG~G~fG~Vy~g~~  158 (502)
                      ...|+.|....+|+...
T Consensus        38 ~~~l~~G~~N~~y~v~~   54 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGL   54 (369)
T ss_dssp             EEEC----CCEEEEEEE
T ss_pred             EEEeCCcccceEEEEEe
Confidence            34677788889998875


No 297
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=23.16  E-value=34  Score=22.82  Aligned_cols=11  Identities=9%  Similarity=0.108  Sum_probs=4.9

Q ss_pred             HhhhheeecCC
Q 039267           96 GLTWIYLTARP  106 (502)
Q Consensus        96 ~~~~~~~~~r~  106 (502)
                      ++.|+|+++|+
T Consensus        28 ~~~~~~~RRRr   38 (44)
T 2l2t_A           28 LTFAVYVRRKS   38 (44)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHhhhhh
Confidence            33444444443


No 298
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=21.99  E-value=35  Score=34.47  Aligned_cols=18  Identities=6%  Similarity=0.150  Sum_probs=14.0

Q ss_pred             EeeeeecCceEEEEEEEe
Q 039267          142 GDKLGEGSFGVVYSGAIV  159 (502)
Q Consensus       142 ~~~IG~G~fG~Vy~g~~~  159 (502)
                      .+.|+.|-...||+....
T Consensus        78 v~~l~gG~tN~~y~v~~~   95 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLS   95 (429)
T ss_dssp             EEEECCCTTEEEEEEEEC
T ss_pred             EEEeCCCcccceEEEEeC
Confidence            456788888999998763


Done!