Query 039271
Match_columns 609
No_of_seqs 196 out of 2651
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 08:02:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039271.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039271hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.2E-42 2.7E-47 379.6 40.4 530 51-588 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 1.2E-38 2.6E-43 331.5 27.5 462 52-584 17-492 (498)
3 PRK10207 dipeptide/tripeptide 100.0 3.1E-35 6.7E-40 321.3 41.6 462 52-585 10-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 1.5E-33 3.3E-38 307.7 39.9 452 53-584 7-473 (475)
5 PRK15462 dipeptide/tripeptide 100.0 5E-33 1.1E-37 300.0 40.7 426 53-535 6-437 (493)
6 PRK09584 tppB putative tripept 100.0 1.1E-32 2.4E-37 302.7 40.5 457 53-585 18-485 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 2.6E-25 5.6E-30 248.0 39.8 336 70-462 1-343 (654)
8 TIGR01299 synapt_SV2 synaptic 100.0 1.8E-25 4E-30 252.1 37.5 155 76-259 186-353 (742)
9 PRK03545 putative arabinose tr 99.9 5.8E-24 1.3E-28 227.0 34.9 373 55-580 8-381 (390)
10 PRK10077 xylE D-xylose transpo 99.9 2.1E-24 4.6E-29 236.5 31.8 435 56-594 12-472 (479)
11 PRK05122 major facilitator sup 99.9 2.3E-23 5E-28 222.9 37.4 376 55-580 14-390 (399)
12 COG2814 AraJ Arabinose efflux 99.9 3.5E-23 7.6E-28 214.1 35.7 379 52-581 9-388 (394)
13 TIGR00887 2A0109 phosphate:H+ 99.9 8.5E-24 1.8E-28 233.3 31.6 180 55-258 15-222 (502)
14 PRK10489 enterobactin exporter 99.9 1.3E-23 2.9E-28 226.3 32.2 393 59-592 20-412 (417)
15 PRK11551 putative 3-hydroxyphe 99.9 5.7E-23 1.2E-27 220.3 36.8 357 54-537 13-369 (406)
16 PRK12382 putative transporter; 99.9 8.9E-23 1.9E-27 217.9 37.8 374 55-578 14-388 (392)
17 PRK11646 multidrug resistance 99.9 5E-23 1.1E-27 220.5 35.4 348 59-539 13-360 (400)
18 PRK10642 proline/glycine betai 99.9 1.2E-22 2.5E-27 223.5 38.9 168 55-252 15-204 (490)
19 PRK10054 putative transporter; 99.9 2.1E-23 4.6E-28 223.0 30.9 174 54-257 5-178 (395)
20 PRK10504 putative transporter; 99.9 1E-22 2.3E-27 222.8 36.6 401 55-539 9-416 (471)
21 PRK14995 methyl viologen resis 99.9 7.6E-23 1.6E-27 225.2 34.8 399 55-537 5-412 (495)
22 PRK11663 regulatory protein Uh 99.9 9.4E-23 2E-27 220.8 32.9 168 57-254 24-191 (434)
23 TIGR00879 SP MFS transporter, 99.9 7.2E-23 1.5E-27 222.9 31.9 144 91-260 70-216 (481)
24 TIGR00900 2A0121 H+ Antiporter 99.9 2.1E-22 4.5E-27 211.5 32.4 358 61-537 4-362 (365)
25 TIGR00903 2A0129 major facilit 99.9 4.9E-22 1.1E-26 210.0 33.9 156 73-259 8-163 (368)
26 PRK09874 drug efflux system pr 99.9 2.8E-22 6.1E-27 214.8 32.1 378 57-579 15-398 (408)
27 PRK15402 multidrug efflux syst 99.9 1.4E-21 3.1E-26 209.7 37.2 173 56-258 10-185 (406)
28 PRK09705 cynX putative cyanate 99.9 6.3E-22 1.4E-26 211.5 34.1 367 67-586 20-388 (393)
29 TIGR02332 HpaX 4-hydroxyphenyl 99.9 7.7E-22 1.7E-26 212.2 34.2 178 52-259 4-187 (412)
30 PLN00028 nitrate transmembrane 99.9 6.3E-22 1.4E-26 216.7 33.8 175 54-259 34-217 (476)
31 PRK10406 alpha-ketoglutarate t 99.9 1.7E-21 3.7E-26 210.9 36.7 175 57-253 23-211 (432)
32 TIGR00892 2A0113 monocarboxyla 99.9 1.7E-22 3.7E-27 220.0 29.0 153 77-260 40-193 (455)
33 TIGR00893 2A0114 d-galactonate 99.9 4.4E-22 9.4E-27 210.8 31.3 154 77-259 14-167 (399)
34 PRK12307 putative sialic acid 99.9 1E-21 2.2E-26 212.0 34.4 165 55-249 17-181 (426)
35 PRK11273 glpT sn-glycerol-3-ph 99.9 8.4E-22 1.8E-26 214.5 33.9 153 78-256 50-203 (452)
36 TIGR00711 efflux_EmrB drug res 99.9 8E-22 1.7E-26 216.3 33.4 398 58-537 4-409 (485)
37 PRK10213 nepI ribonucleoside t 99.9 3.6E-21 7.8E-26 205.7 37.1 173 53-255 17-189 (394)
38 PRK09952 shikimate transporter 99.9 4.2E-21 9E-26 208.2 37.9 176 55-252 21-211 (438)
39 TIGR00898 2A0119 cation transp 99.9 3.3E-22 7.1E-27 220.8 29.7 147 82-260 114-263 (505)
40 PF07690 MFS_1: Major Facilita 99.9 2.3E-22 5E-27 210.3 26.4 350 62-529 2-352 (352)
41 PRK09556 uhpT sugar phosphate 99.9 2.9E-22 6.2E-27 219.1 28.2 155 80-258 52-209 (467)
42 COG2271 UhpC Sugar phosphate p 99.9 1.7E-22 3.8E-27 206.2 24.2 174 57-259 26-204 (448)
43 TIGR00890 2A0111 Oxalate/Forma 99.9 7.8E-22 1.7E-26 208.0 30.1 155 72-257 19-173 (377)
44 TIGR00899 2A0120 sugar efflux 99.9 4.4E-21 9.5E-26 202.9 34.3 169 62-259 3-174 (375)
45 PRK10091 MFS transport protein 99.9 5.4E-21 1.2E-25 203.5 34.8 173 56-258 3-175 (382)
46 TIGR00891 2A0112 putative sial 99.9 2.9E-21 6.4E-26 206.1 32.8 174 52-255 8-183 (405)
47 TIGR00710 efflux_Bcr_CflA drug 99.9 1.9E-20 4.2E-25 198.7 36.7 175 55-259 4-178 (385)
48 PRK15403 multidrug efflux syst 99.9 1.6E-20 3.6E-25 201.9 36.3 153 77-259 37-189 (413)
49 cd06174 MFS The Major Facilita 99.9 8.4E-21 1.8E-25 197.8 33.0 346 60-576 3-349 (352)
50 KOG0254 Predicted transporter 99.9 4.5E-21 9.7E-26 212.0 32.3 404 93-596 90-500 (513)
51 KOG0569 Permease of the major 99.9 2.5E-21 5.4E-26 206.2 28.5 398 95-597 63-472 (485)
52 PRK03699 putative transporter; 99.9 1.5E-20 3.3E-25 200.9 34.9 175 53-257 4-179 (394)
53 TIGR00895 2A0115 benzoate tran 99.9 4.2E-21 9.2E-26 204.1 29.9 172 55-256 16-187 (398)
54 TIGR00897 2A0118 polyol permea 99.9 4.8E-20 1E-24 197.7 38.2 171 53-249 10-181 (402)
55 PRK11195 lysophospholipid tran 99.9 2.2E-20 4.8E-25 199.6 34.4 166 57-256 4-169 (393)
56 PRK03893 putative sialic acid 99.9 8.7E-21 1.9E-25 208.9 32.2 169 53-251 17-185 (496)
57 PRK03633 putative MFS family t 99.9 3.1E-20 6.6E-25 197.7 35.1 156 55-240 5-160 (381)
58 PRK11652 emrD multidrug resist 99.9 3.7E-20 7.9E-25 197.9 35.8 172 54-255 6-177 (394)
59 PRK15075 citrate-proton sympor 99.9 8E-20 1.7E-24 197.9 36.6 165 54-248 13-199 (434)
60 TIGR00894 2A0114euk Na(+)-depe 99.9 2E-20 4.3E-25 204.5 31.6 147 86-259 70-217 (465)
61 PRK15011 sugar efflux transpor 99.9 1.1E-19 2.3E-24 194.3 36.3 173 57-259 16-192 (393)
62 PRK11043 putative transporter; 99.9 1.3E-19 2.8E-24 194.1 36.2 162 69-259 16-179 (401)
63 TIGR00712 glpT glycerol-3-phos 99.9 1.9E-20 4.2E-25 203.0 29.7 175 57-258 28-203 (438)
64 TIGR00902 2A0127 phenyl propri 99.9 1.1E-19 2.4E-24 193.5 34.9 364 59-574 7-374 (382)
65 PRK09528 lacY galactoside perm 99.9 3.2E-20 6.9E-25 200.2 31.0 391 56-579 10-403 (420)
66 TIGR00881 2A0104 phosphoglycer 99.9 2.5E-20 5.4E-25 196.6 26.8 151 79-258 17-168 (379)
67 PRK11102 bicyclomycin/multidru 99.9 1.9E-19 4.2E-24 190.8 33.3 155 74-258 9-163 (377)
68 KOG1330 Sugar transporter/spin 99.9 3.2E-21 6.9E-26 198.7 17.0 180 53-262 30-210 (493)
69 PRK10473 multidrug efflux syst 99.9 1.2E-18 2.5E-23 186.1 36.4 169 59-257 6-174 (392)
70 PRK11010 ampG muropeptide tran 99.9 1.3E-18 2.8E-23 191.2 37.3 180 51-259 7-193 (491)
71 TIGR00882 2A0105 oligosacchari 99.9 8E-19 1.7E-23 187.7 34.7 387 56-575 2-391 (396)
72 PF00854 PTR2: POT family; In 99.9 2.8E-21 6.1E-26 204.9 15.2 364 123-521 1-369 (372)
73 TIGR00889 2A0110 nucleoside tr 99.9 4.8E-18 1E-22 183.0 38.1 386 61-582 7-405 (418)
74 PF05977 MFS_3: Transmembrane 99.9 2.1E-18 4.5E-23 188.9 35.2 357 57-537 11-368 (524)
75 PRK08633 2-acyl-glycerophospho 99.8 1.2E-18 2.5E-23 211.2 35.7 359 56-535 9-381 (1146)
76 TIGR00792 gph sugar (Glycoside 99.8 3.1E-18 6.7E-23 185.4 35.3 354 66-539 9-381 (437)
77 PRK10133 L-fucose transporter; 99.8 3.8E-18 8.2E-23 184.8 35.8 152 55-233 25-176 (438)
78 PRK06814 acylglycerophosphoeth 99.8 6.1E-19 1.3E-23 213.4 32.9 338 92-536 52-394 (1140)
79 KOG2532 Permease of the major 99.8 1.5E-19 3.2E-24 194.7 23.9 377 86-579 67-447 (466)
80 TIGR00886 2A0108 nitrite extru 99.8 2.3E-19 5.1E-24 189.2 25.1 159 57-245 2-171 (366)
81 PRK15034 nitrate/nitrite trans 99.8 2.2E-18 4.7E-23 184.6 32.0 178 56-259 34-230 (462)
82 PRK11128 putative 3-phenylprop 99.8 5E-18 1.1E-22 180.7 33.1 336 65-537 13-354 (382)
83 PF00083 Sugar_tr: Sugar (and 99.8 8E-24 1.7E-28 230.2 -16.2 395 93-593 47-450 (451)
84 TIGR00883 2A0106 metabolite-pr 99.8 1.1E-17 2.3E-22 177.5 29.8 157 78-255 14-185 (394)
85 PRK11902 ampG muropeptide tran 99.8 1.7E-16 3.8E-21 170.1 38.0 167 62-256 5-177 (402)
86 KOG0255 Synaptic vesicle trans 99.8 3.8E-17 8.1E-22 181.3 33.5 140 85-256 111-250 (521)
87 TIGR00896 CynX cyanate transpo 99.8 5.8E-18 1.3E-22 178.2 25.0 325 77-539 21-349 (355)
88 TIGR01301 GPH_sucrose GPH fami 99.8 1.3E-16 2.9E-21 171.9 35.9 439 57-584 5-476 (477)
89 TIGR00885 fucP L-fucose:H+ sym 99.8 1.7E-16 3.7E-21 170.4 34.5 172 58-256 5-202 (410)
90 COG2223 NarK Nitrate/nitrite t 99.8 1.6E-17 3.5E-22 170.3 25.1 182 54-264 12-196 (417)
91 TIGR00901 2A0125 AmpG-related 99.8 1.1E-16 2.4E-21 168.6 30.6 153 78-258 10-175 (356)
92 PRK09848 glucuronide transport 99.8 1E-15 2.2E-20 166.5 37.4 362 61-540 13-390 (448)
93 PRK10429 melibiose:sodium symp 99.8 9E-16 1.9E-20 168.1 36.1 364 63-541 13-396 (473)
94 PF03825 Nuc_H_symport: Nucleo 99.8 2.7E-15 6E-20 159.6 35.8 381 66-581 12-397 (400)
95 PRK09669 putative symporter Ya 99.8 3.4E-15 7.3E-20 162.3 35.1 173 63-256 16-199 (444)
96 KOG2504 Monocarboxylate transp 99.7 4.5E-16 9.7E-21 169.8 25.2 427 59-579 45-476 (509)
97 TIGR00806 rfc RFC reduced fola 99.7 1.4E-15 3E-20 160.3 27.8 158 73-261 42-203 (511)
98 TIGR02718 sider_RhtX_FptX side 99.7 9.8E-15 2.1E-19 155.8 34.2 178 58-261 3-184 (390)
99 TIGR00788 fbt folate/biopterin 99.7 1.5E-14 3.2E-19 157.9 34.4 382 57-539 27-414 (468)
100 KOG0253 Synaptic vesicle trans 99.7 2.4E-15 5.3E-20 150.2 25.3 183 61-274 82-264 (528)
101 KOG2615 Permease of the major 99.7 2.4E-15 5.2E-20 151.4 25.0 119 87-235 63-181 (451)
102 PF06609 TRI12: Fungal trichot 99.7 1.5E-14 3.2E-19 158.3 33.3 148 78-256 65-212 (599)
103 KOG0252 Inorganic phosphate tr 99.7 8E-16 1.7E-20 158.3 20.7 142 89-252 81-237 (538)
104 TIGR00805 oat sodium-independe 99.7 8.1E-15 1.8E-19 165.2 27.2 201 55-262 31-282 (633)
105 PF01306 LacY_symp: LacY proto 99.7 1.5E-14 3.3E-19 151.7 26.8 385 57-582 8-403 (412)
106 COG0738 FucP Fucose permease [ 99.7 6.4E-14 1.4E-18 143.1 30.0 139 71-235 27-165 (422)
107 PF13347 MFS_2: MFS/sugar tran 99.7 5.2E-15 1.1E-19 160.0 23.4 358 66-542 11-388 (428)
108 PRK11462 putative transporter; 99.7 1.9E-13 4.2E-18 149.0 35.5 171 63-254 16-197 (460)
109 KOG2533 Permease of the major 99.7 6.4E-14 1.4E-18 151.5 28.3 151 84-263 73-229 (495)
110 KOG3764 Vesicular amine transp 99.6 9E-15 2E-19 148.2 18.8 146 86-259 100-245 (464)
111 PTZ00207 hypothetical protein; 99.6 1.5E-12 3.2E-17 143.7 37.9 173 54-255 26-199 (591)
112 COG2807 CynX Cyanate permease 99.6 3.6E-13 7.9E-18 135.6 30.1 341 62-539 18-360 (395)
113 PRK10642 proline/glycine betai 99.6 1.7E-14 3.7E-19 158.8 18.2 180 54-259 248-428 (490)
114 COG2211 MelB Na+/melibiose sym 99.6 4.1E-12 8.9E-17 134.7 34.7 365 57-539 13-397 (467)
115 PF11700 ATG22: Vacuole efflux 99.5 3.2E-11 7E-16 131.0 37.0 86 475-575 379-464 (477)
116 COG2271 UhpC Sugar phosphate p 99.5 1.6E-13 3.4E-18 141.0 15.2 178 56-259 252-432 (448)
117 PRK15011 sugar efflux transpor 99.5 1.4E-12 3E-17 139.5 20.5 173 58-260 218-390 (393)
118 PF03209 PUCC: PUCC protein; 99.5 1.6E-10 3.6E-15 119.4 34.5 344 84-539 7-364 (403)
119 PRK09952 shikimate transporter 99.5 2.5E-12 5.3E-17 139.6 20.3 182 54-260 248-432 (438)
120 PRK09556 uhpT sugar phosphate 99.5 1.8E-12 4E-17 141.8 17.9 177 56-259 258-447 (467)
121 TIGR00883 2A0106 metabolite-pr 99.4 1.1E-12 2.4E-17 139.0 14.8 172 55-251 218-391 (394)
122 KOG2563 Permease of the major 99.4 2.2E-11 4.7E-16 126.1 22.9 387 77-590 65-461 (480)
123 TIGR00893 2A0114 d-galactonate 99.4 7.4E-12 1.6E-16 132.4 18.7 180 56-258 215-396 (399)
124 PRK05122 major facilitator sup 99.4 7.9E-12 1.7E-16 133.7 19.0 170 67-268 227-396 (399)
125 TIGR00899 2A0120 sugar efflux 99.4 8.7E-12 1.9E-16 131.8 19.0 161 69-259 212-372 (375)
126 TIGR00890 2A0111 Oxalate/Forma 99.4 4.1E-12 8.9E-17 133.8 16.3 169 58-254 207-375 (377)
127 PRK11551 putative 3-hydroxyphe 99.4 1.5E-11 3.2E-16 131.9 20.6 171 59-259 223-394 (406)
128 cd06174 MFS The Major Facilita 99.4 1.3E-11 2.7E-16 128.5 18.7 173 57-258 176-349 (352)
129 TIGR01299 synapt_SV2 synaptic 99.4 1E-11 2.3E-16 140.9 18.4 134 97-260 600-733 (742)
130 PRK03699 putative transporter; 99.4 1.3E-11 2.7E-16 132.1 17.5 171 56-256 205-375 (394)
131 TIGR00889 2A0110 nucleoside tr 99.4 1.1E-11 2.4E-16 133.6 17.1 174 60-259 212-400 (418)
132 PRK09874 drug efflux system pr 99.4 1.9E-11 4.2E-16 130.9 19.0 165 66-259 229-396 (408)
133 TIGR00891 2A0112 putative sial 99.3 1.9E-11 4E-16 130.4 16.8 161 58-246 240-401 (405)
134 TIGR00880 2_A_01_02 Multidrug 99.3 7.5E-12 1.6E-16 111.9 11.0 133 98-259 4-136 (141)
135 PRK09705 cynX putative cyanate 99.3 6.1E-11 1.3E-15 126.8 19.2 176 57-263 206-383 (393)
136 TIGR00902 2A0127 phenyl propri 99.3 7.3E-11 1.6E-15 125.7 19.2 170 56-257 205-375 (382)
137 PRK09528 lacY galactoside perm 99.3 2.7E-11 5.9E-16 130.6 15.9 162 68-258 235-400 (420)
138 PRK11273 glpT sn-glycerol-3-ph 99.3 5.7E-11 1.2E-15 129.5 18.5 177 56-258 253-432 (452)
139 KOG2325 Predicted transporter/ 99.3 2.5E-11 5.5E-16 129.0 15.1 187 51-263 29-231 (488)
140 PRK10406 alpha-ketoglutarate t 99.3 9.4E-11 2E-15 127.0 19.9 169 65-259 252-422 (432)
141 PRK11663 regulatory protein Uh 99.3 6.6E-11 1.4E-15 128.3 18.0 177 57-259 244-422 (434)
142 PRK03633 putative MFS family t 99.3 1E-10 2.3E-15 124.4 19.1 157 70-259 214-370 (381)
143 PRK12382 putative transporter; 99.3 4.2E-11 9.1E-16 127.8 16.0 160 68-259 228-387 (392)
144 PRK10489 enterobactin exporter 99.3 6.1E-11 1.3E-15 127.8 17.4 162 72-262 239-400 (417)
145 PRK03545 putative arabinose tr 99.3 1.9E-10 4.1E-15 122.8 21.0 172 59-260 208-379 (390)
146 TIGR00897 2A0118 polyol permea 99.3 2.1E-10 4.5E-15 123.1 20.1 176 57-259 223-399 (402)
147 KOG4686 Predicted sugar transp 99.3 2.4E-11 5.2E-16 117.8 11.4 136 76-236 63-198 (459)
148 PRK15075 citrate-proton sympor 99.3 1.9E-10 4.1E-15 124.7 19.0 153 62-240 244-398 (434)
149 PRK11010 ampG muropeptide tran 99.3 2.7E-10 6E-15 125.3 20.2 173 65-262 231-404 (491)
150 COG2270 Permeases of the major 99.3 2.6E-09 5.6E-14 110.4 25.7 106 76-201 35-148 (438)
151 PRK03893 putative sialic acid 99.3 1.7E-10 3.7E-15 127.1 18.1 150 74-250 293-442 (496)
152 COG2814 AraJ Arabinose efflux 99.3 2.2E-10 4.8E-15 119.3 17.7 177 57-263 212-388 (394)
153 PF11700 ATG22: Vacuole efflux 99.2 3.1E-10 6.6E-15 123.4 19.5 186 55-261 280-468 (477)
154 TIGR00881 2A0104 phosphoglycer 99.2 6.6E-11 1.4E-15 124.7 13.4 164 56-243 216-379 (379)
155 TIGR00712 glpT glycerol-3-phos 99.2 1.7E-10 3.7E-15 125.2 16.8 181 57-262 252-434 (438)
156 TIGR00892 2A0113 monocarboxyla 99.2 2.2E-10 4.7E-15 125.0 17.1 172 56-256 241-416 (455)
157 PF03092 BT1: BT1 family; Int 99.2 8E-09 1.7E-13 111.6 27.5 162 78-262 11-176 (433)
158 TIGR00879 SP MFS transporter, 99.2 3.5E-10 7.6E-15 123.0 17.0 166 75-260 303-469 (481)
159 KOG4686 Predicted sugar transp 99.2 4.3E-10 9.3E-15 109.2 15.0 167 55-252 263-433 (459)
160 TIGR01272 gluP glucose/galacto 99.2 5.8E-09 1.2E-13 107.8 23.6 84 166-255 8-107 (310)
161 TIGR00900 2A0121 H+ Antiporter 99.2 3.9E-10 8.4E-15 118.2 15.0 153 57-238 211-365 (365)
162 COG2223 NarK Nitrate/nitrite t 99.2 4.5E-10 9.8E-15 115.9 14.7 183 56-261 218-401 (417)
163 PRK10504 putative transporter; 99.2 1.1E-09 2.4E-14 119.9 19.0 157 57-239 262-418 (471)
164 TIGR00895 2A0115 benzoate tran 99.2 3E-10 6.5E-15 120.6 14.0 148 56-233 250-397 (398)
165 TIGR00894 2A0114euk Na(+)-depe 99.2 1.2E-09 2.6E-14 119.5 19.0 178 55-259 260-448 (465)
166 TIGR02332 HpaX 4-hydroxyphenyl 99.2 6.2E-10 1.3E-14 119.8 16.0 165 56-249 242-409 (412)
167 PRK11128 putative 3-phenylprop 99.1 1.7E-09 3.6E-14 115.2 18.6 168 56-255 205-373 (382)
168 TIGR02718 sider_RhtX_FptX side 99.1 3E-09 6.6E-14 113.5 18.9 174 58-255 210-385 (390)
169 PRK15402 multidrug efflux syst 99.1 7E-09 1.5E-13 111.3 21.8 172 57-253 216-387 (406)
170 PRK12307 putative sialic acid 99.1 2.7E-09 5.9E-14 115.1 18.7 148 70-245 245-392 (426)
171 TIGR01272 gluP glucose/galacto 99.1 2.7E-09 5.8E-14 110.2 17.6 161 57-249 141-303 (310)
172 PRK10091 MFS transport protein 99.1 3.8E-09 8.3E-14 112.5 19.0 171 58-258 201-373 (382)
173 TIGR00882 2A0105 oligosacchari 99.1 3E-09 6.5E-14 113.8 18.3 170 58-256 217-390 (396)
174 PLN00028 nitrate transmembrane 99.1 2E-09 4.3E-14 118.1 17.3 175 58-261 254-433 (476)
175 KOG3626 Organic anion transpor 99.1 1.3E-08 2.9E-13 112.7 23.2 203 57-266 97-348 (735)
176 KOG2816 Predicted transporter 99.1 7.1E-08 1.5E-12 104.0 27.0 362 59-540 24-394 (463)
177 PRK11902 ampG muropeptide tran 99.1 9.6E-09 2.1E-13 110.2 20.1 157 77-262 230-391 (402)
178 PRK10054 putative transporter; 99.1 2.3E-09 5.1E-14 114.7 15.3 173 57-258 207-381 (395)
179 TIGR00792 gph sugar (Glycoside 99.0 3E-09 6.6E-14 115.1 15.7 161 56-239 222-383 (437)
180 TIGR00711 efflux_EmrB drug res 99.0 2.2E-09 4.7E-14 117.8 14.6 156 56-236 255-410 (485)
181 PF05977 MFS_3: Transmembrane 99.0 6E-09 1.3E-13 114.6 17.8 172 58-258 220-391 (524)
182 PF05631 DUF791: Protein of un 99.0 2.1E-07 4.6E-12 95.1 27.5 152 85-262 62-217 (354)
183 TIGR00710 efflux_Bcr_CflA drug 99.0 1.7E-08 3.7E-13 107.0 20.6 163 58-246 208-371 (385)
184 TIGR00887 2A0109 phosphate:H+ 99.0 4.3E-09 9.3E-14 116.3 16.3 170 62-257 294-485 (502)
185 PRK14995 methyl viologen resis 99.0 4E-09 8.6E-14 116.4 16.0 154 56-235 259-412 (495)
186 PRK10077 xylE D-xylose transpo 99.0 1.1E-08 2.4E-13 112.1 18.9 160 75-260 290-456 (479)
187 TIGR00896 CynX cyanate transpo 99.0 6.3E-09 1.4E-13 109.5 15.4 153 57-238 198-350 (355)
188 PRK10213 nepI ribonucleoside t 99.0 3.3E-08 7.1E-13 105.8 20.9 167 57-254 217-384 (394)
189 PRK15034 nitrate/nitrite trans 99.0 2.3E-08 4.9E-13 107.7 18.9 184 57-259 253-452 (462)
190 COG2270 Permeases of the major 99.0 9.4E-09 2E-13 106.3 14.8 176 56-260 252-428 (438)
191 PRK11646 multidrug resistance 99.0 1.3E-08 2.9E-13 109.0 16.7 153 75-256 227-383 (400)
192 TIGR00903 2A0129 major facilit 99.0 3.2E-08 6.9E-13 104.8 18.8 167 56-258 192-362 (368)
193 PRK08633 2-acyl-glycerophospho 99.0 1.4E-08 3.1E-13 123.5 18.4 164 57-249 233-398 (1146)
194 PRK10133 L-fucose transporter; 98.9 2.7E-08 5.9E-13 107.9 18.2 165 61-257 263-429 (438)
195 PF03137 OATP: Organic Anion T 98.9 1E-10 2.3E-15 128.8 -1.0 196 64-267 11-256 (539)
196 KOG2504 Monocarboxylate transp 98.9 1.9E-08 4.1E-13 110.2 15.6 176 56-261 298-476 (509)
197 PF13347 MFS_2: MFS/sugar tran 98.9 2.5E-08 5.4E-13 107.9 16.2 162 56-239 225-387 (428)
198 PRK11102 bicyclomycin/multidru 98.9 9.5E-08 2.1E-12 101.2 19.8 149 58-232 196-345 (377)
199 TIGR00901 2A0125 AmpG-related 98.9 2.8E-08 6E-13 104.6 15.5 145 57-220 210-355 (356)
200 KOG2532 Permease of the major 98.9 2.1E-08 4.5E-13 108.5 14.6 177 56-259 258-445 (466)
201 PRK11195 lysophospholipid tran 98.9 8.4E-08 1.8E-12 102.6 18.8 158 69-256 218-375 (393)
202 KOG0253 Synaptic vesicle trans 98.9 2E-08 4.3E-13 101.3 12.8 170 58-257 328-516 (528)
203 PRK06814 acylglycerophosphoeth 98.9 3.6E-08 7.8E-13 119.9 17.3 185 56-249 225-410 (1140)
204 PF07690 MFS_1: Major Facilita 98.9 8.4E-09 1.8E-13 107.6 10.0 142 60-227 210-352 (352)
205 TIGR00898 2A0119 cation transp 98.8 3.1E-08 6.7E-13 109.5 14.2 133 98-259 361-493 (505)
206 PRK09848 glucuronide transport 98.8 4.5E-08 9.7E-13 106.6 14.8 163 56-239 228-391 (448)
207 PRK10473 multidrug efflux syst 98.8 1.6E-07 3.4E-12 100.3 18.4 69 74-143 221-289 (392)
208 KOG0569 Permease of the major 98.8 2.4E-07 5.3E-12 99.6 19.2 188 56-264 269-457 (485)
209 COG2807 CynX Cyanate permease 98.8 2.9E-07 6.2E-12 93.5 17.2 167 57-252 209-376 (395)
210 PRK11043 putative transporter; 98.8 7.4E-07 1.6E-11 95.4 21.6 150 66-241 213-362 (401)
211 PRK09669 putative symporter Ya 98.7 3.8E-07 8.2E-12 99.2 16.3 127 92-239 264-391 (444)
212 KOG3762 Predicted transporter 98.7 8.4E-07 1.8E-11 94.1 18.0 139 400-581 410-549 (618)
213 PF03825 Nuc_H_symport: Nucleo 98.7 8.1E-07 1.8E-11 94.9 18.3 177 58-258 209-392 (400)
214 TIGR00886 2A0108 nitrite extru 98.7 1.7E-07 3.7E-12 98.7 12.9 140 58-223 227-366 (366)
215 PRK10429 melibiose:sodium symp 98.6 3.3E-07 7.1E-12 100.6 14.3 165 56-239 231-396 (473)
216 KOG3098 Uncharacterized conser 98.6 3E-05 6.5E-10 82.9 27.3 111 93-233 50-161 (461)
217 PRK11652 emrD multidrug resist 98.6 4.3E-06 9.2E-11 89.3 20.8 139 75-240 226-364 (394)
218 TIGR00885 fucP L-fucose:H+ sym 98.6 1.5E-06 3.3E-11 93.5 17.2 163 58-252 234-403 (410)
219 PF01306 LacY_symp: LacY proto 98.6 7.2E-07 1.6E-11 94.2 13.9 175 56-259 220-398 (412)
220 TIGR00924 yjdL_sub1_fam amino 98.4 3.7E-06 8E-11 92.3 15.7 186 58-262 274-469 (475)
221 KOG3764 Vesicular amine transp 98.4 6.1E-07 1.3E-11 92.0 8.0 177 57-256 271-449 (464)
222 PRK11462 putative transporter; 98.4 6E-06 1.3E-10 90.2 15.7 127 92-239 263-390 (460)
223 KOG1330 Sugar transporter/spin 98.4 2.4E-07 5.2E-12 96.8 3.9 148 397-586 69-216 (493)
224 TIGR01301 GPH_sucrose GPH fami 98.3 1.8E-05 3.8E-10 86.1 17.8 205 51-263 253-473 (477)
225 TIGR00880 2_A_01_02 Multidrug 98.3 2.1E-05 4.5E-10 69.7 15.5 134 404-580 6-139 (141)
226 COG0738 FucP Fucose permease [ 98.3 1.3E-05 2.8E-10 82.9 15.5 154 59-244 239-392 (422)
227 TIGR00769 AAA ADP/ATP carrier 98.3 0.00089 1.9E-08 72.5 30.1 168 55-234 6-189 (472)
228 PRK15403 multidrug efflux syst 98.3 2.9E-05 6.3E-10 83.6 18.8 173 56-254 218-390 (413)
229 COG0477 ProP Permeases of the 98.3 1.8E-05 4E-10 79.3 16.2 146 77-250 23-174 (338)
230 PF06813 Nodulin-like: Nodulin 98.3 4.7E-05 1E-09 75.3 18.0 166 71-261 17-182 (250)
231 COG2211 MelB Na+/melibiose sym 98.3 9.3E-06 2E-10 86.8 13.8 158 57-236 237-396 (467)
232 PF03209 PUCC: PUCC protein; 98.3 2.5E-05 5.5E-10 81.3 16.4 167 66-257 218-394 (403)
233 PF01770 Folate_carrier: Reduc 98.2 0.00059 1.3E-08 72.0 25.5 157 76-262 23-183 (412)
234 PRK09584 tppB putative tripept 98.2 3.3E-05 7.2E-10 85.3 16.7 178 65-262 281-480 (500)
235 KOG3762 Predicted transporter 98.2 6.6E-06 1.4E-10 87.5 10.4 172 61-262 376-548 (618)
236 PF00083 Sugar_tr: Sugar (and 98.2 1.5E-08 3.1E-13 110.3 -10.9 185 56-262 252-437 (451)
237 KOG2533 Permease of the major 98.1 1.8E-05 4E-10 86.2 12.1 166 57-249 274-444 (495)
238 PRK10207 dipeptide/tripeptide 98.1 5.7E-05 1.2E-09 83.1 15.4 150 65-233 278-438 (489)
239 TIGR00805 oat sodium-independe 98.1 3.7E-05 8E-10 87.2 13.4 133 395-538 67-234 (633)
240 KOG0637 Sucrose transporter an 98.1 0.00011 2.4E-09 77.1 15.5 163 56-233 32-202 (498)
241 PF12832 MFS_1_like: MFS_1 lik 98.0 4.7E-05 1E-09 60.9 9.0 67 64-132 8-74 (77)
242 PF02487 CLN3: CLN3 protein; 98.0 0.007 1.5E-07 63.9 27.8 62 475-536 334-395 (402)
243 KOG4332 Predicted sugar transp 98.0 0.00012 2.7E-09 71.2 13.4 154 80-258 60-217 (454)
244 TIGR00788 fbt folate/biopterin 98.0 2.3E-05 5E-10 85.8 9.7 135 84-238 280-415 (468)
245 KOG0252 Inorganic phosphate tr 97.8 1.1E-05 2.3E-10 84.5 3.3 180 56-261 304-498 (538)
246 KOG0254 Predicted transporter 97.8 0.0005 1.1E-08 76.3 15.6 183 54-255 292-476 (513)
247 PF06963 FPN1: Ferroportin1 (F 97.7 0.085 1.8E-06 56.7 31.2 192 57-256 3-195 (432)
248 PRK15462 dipeptide/tripeptide 97.7 0.00063 1.4E-08 74.4 14.5 137 402-580 51-190 (493)
249 PTZ00207 hypothetical protein; 97.7 0.0014 3E-08 73.1 17.3 116 438-581 92-207 (591)
250 KOG2325 Predicted transporter/ 97.6 0.0024 5.3E-08 68.7 17.3 163 399-586 74-236 (488)
251 KOG2615 Permease of the major 97.5 0.0015 3.3E-08 67.2 13.1 150 58-235 262-413 (451)
252 KOG3574 Acetyl-CoA transporter 97.5 0.055 1.2E-06 55.9 23.7 60 478-537 371-430 (510)
253 TIGR00806 rfc RFC reduced fola 97.4 0.0035 7.6E-08 67.3 15.6 81 438-535 93-173 (511)
254 PF06609 TRI12: Fungal trichot 97.1 0.0063 1.4E-07 67.7 13.6 151 54-231 308-462 (599)
255 PRK03612 spermidine synthase; 97.0 0.037 8.1E-07 61.2 18.8 175 57-259 18-196 (521)
256 KOG2563 Permease of the major 97.0 0.0042 9E-08 65.5 10.2 185 57-267 267-456 (480)
257 PF05978 UNC-93: Ion channel r 97.0 0.021 4.5E-07 52.3 13.5 106 96-231 41-146 (156)
258 PF06963 FPN1: Ferroportin1 (F 96.9 0.03 6.5E-07 60.2 16.3 149 63-231 265-413 (432)
259 KOG2816 Predicted transporter 96.8 0.0061 1.3E-07 66.2 9.9 150 55-234 239-390 (463)
260 PF03219 TLC: TLC ATP/ADP tran 96.7 0.29 6.3E-06 53.6 22.2 169 52-235 20-205 (491)
261 KOG0255 Synaptic vesicle trans 96.7 0.039 8.4E-07 61.3 15.8 106 104-235 362-467 (521)
262 KOG3626 Organic anion transpor 96.7 0.018 3.9E-07 64.8 12.7 173 57-235 393-648 (735)
263 PF03137 OATP: Organic Anion T 96.7 0.00034 7.3E-09 77.6 -0.9 141 386-537 28-202 (539)
264 PF06779 DUF1228: Protein of u 96.6 0.021 4.6E-07 46.2 9.5 69 73-143 9-77 (85)
265 COG3202 ATP/ADP translocase [E 96.3 2.1 4.5E-05 46.2 28.2 168 54-235 25-209 (509)
266 PF00854 PTR2: POT family; In 95.6 0.12 2.6E-06 54.7 12.0 124 439-585 3-129 (372)
267 KOG1479 Nucleoside transporter 95.1 5.4 0.00012 42.3 24.5 58 475-532 342-399 (406)
268 TIGR00926 2A1704 Peptide:H+ sy 95.1 1.7 3.6E-05 49.6 19.5 59 475-533 564-622 (654)
269 PF06813 Nodulin-like: Nodulin 94.8 0.54 1.2E-05 46.7 13.1 90 436-535 65-154 (250)
270 PF02487 CLN3: CLN3 protein; 94.8 0.17 3.7E-06 53.6 9.9 62 166-233 333-394 (402)
271 COG3104 PTR2 Dipeptide/tripept 94.8 0.43 9.3E-06 51.5 12.8 162 77-257 305-483 (498)
272 PF03092 BT1: BT1 family; Int 93.5 0.75 1.6E-05 49.8 12.1 116 437-581 59-177 (433)
273 KOG0637 Sucrose transporter an 93.2 0.29 6.4E-06 52.0 7.9 93 50-143 273-382 (498)
274 KOG3098 Uncharacterized conser 92.9 2.1 4.5E-05 46.3 14.0 118 101-229 288-407 (461)
275 TIGR00939 2a57 Equilibrative N 92.4 19 0.0004 39.1 32.2 59 475-533 371-429 (437)
276 PF05978 UNC-93: Ion channel r 90.5 5.9 0.00013 36.3 12.4 83 436-535 66-148 (156)
277 TIGR00939 2a57 Equilibrative N 89.9 0.97 2.1E-05 49.0 7.8 57 167-229 371-427 (437)
278 KOG3810 Micronutrient transpor 89.5 1.6 3.5E-05 45.0 8.3 101 473-581 323-423 (433)
279 PF05631 DUF791: Protein of un 89.5 20 0.00044 37.3 16.6 90 398-515 71-165 (354)
280 PF13000 Acatn: Acetyl-coenzym 88.1 5.2 0.00011 43.4 11.5 64 169-238 406-469 (544)
281 PF01770 Folate_carrier: Reduc 85.3 19 0.0004 38.5 13.8 123 65-215 256-381 (412)
282 TIGR00769 AAA ADP/ATP carrier 84.0 71 0.0015 35.0 20.9 43 495-537 148-190 (472)
283 KOG4332 Predicted sugar transp 81.9 12 0.00026 37.4 9.8 175 56-256 249-426 (454)
284 PF03219 TLC: TLC ATP/ADP tran 79.1 99 0.0022 34.1 17.0 65 178-247 292-356 (491)
285 PF01733 Nucleoside_tran: Nucl 79.0 0.68 1.5E-05 47.7 0.3 58 167-230 247-304 (309)
286 KOG3097 Predicted membrane pro 73.9 27 0.00059 36.0 9.9 71 104-198 70-140 (390)
287 KOG3880 Predicted small molecu 73.8 1.1E+02 0.0023 31.6 13.8 58 475-532 341-398 (409)
288 PF13000 Acatn: Acetyl-coenzym 70.1 61 0.0013 35.5 12.1 81 499-582 141-224 (544)
289 KOG3574 Acetyl-CoA transporter 69.5 39 0.00084 35.7 10.0 161 61-240 270-435 (510)
290 PF07857 DUF1632: CEO family ( 66.0 68 0.0015 31.9 10.7 26 508-533 75-100 (254)
291 COG0477 ProP Permeases of the 64.7 91 0.002 30.1 12.0 61 476-536 94-156 (338)
292 PF11947 DUF3464: Protein of u 64.3 40 0.00087 30.6 8.0 91 114-226 56-146 (153)
293 PRK03612 spermidine synthase; 64.2 1.2E+02 0.0026 33.8 13.6 52 484-536 118-169 (521)
294 KOG1479 Nucleoside transporter 61.5 7.4 0.00016 41.3 3.2 129 77-227 264-396 (406)
295 COG5336 Uncharacterized protei 61.1 27 0.00059 29.4 5.8 32 103-134 53-84 (116)
296 COG3619 Predicted membrane pro 57.5 1.9E+02 0.0042 28.2 16.3 61 58-118 14-81 (226)
297 PF06912 DUF1275: Protein of u 54.9 2E+02 0.0043 27.5 16.4 43 96-138 50-94 (209)
298 PF07672 MFS_Mycoplasma: Mycop 52.5 2.5E+02 0.0055 28.0 12.9 54 208-263 4-64 (267)
299 KOG3810 Micronutrient transpor 42.5 4.4E+02 0.0095 27.9 12.2 96 94-216 273-368 (433)
300 PF09527 ATPase_gene1: Putativ 42.1 1.2E+02 0.0025 22.1 6.1 35 100-134 8-42 (55)
301 COG4262 Predicted spermidine s 39.3 4.8E+02 0.01 27.5 13.7 120 54-195 7-132 (508)
302 PRK10263 DNA translocase FtsK; 37.1 1.7E+02 0.0038 35.9 9.6 28 221-248 142-169 (1355)
303 COG5336 Uncharacterized protei 33.4 2.1E+02 0.0045 24.3 6.7 33 506-538 36-68 (116)
304 PF06645 SPC12: Microsomal sig 31.8 70 0.0015 25.3 3.7 41 214-257 12-52 (76)
305 PF06800 Sugar_transport: Suga 31.7 5.5E+02 0.012 25.8 13.8 22 438-459 137-158 (269)
306 TIGR02230 ATPase_gene1 F0F1-AT 29.5 2E+02 0.0043 24.2 6.1 20 109-128 59-78 (100)
307 PHA03049 IMV membrane protein; 29.2 1.1E+02 0.0025 23.2 4.1 20 561-580 6-25 (68)
308 PF07399 DUF1504: Protein of u 28.7 2.5E+02 0.0054 29.9 8.0 31 397-427 312-342 (438)
309 KOG4112 Signal peptidase subun 28.4 71 0.0015 26.2 3.2 27 213-240 26-52 (101)
310 KOG4830 Predicted sugar transp 27.9 1E+02 0.0022 30.9 4.7 61 64-126 25-94 (412)
311 PF01102 Glycophorin_A: Glycop 24.8 67 0.0015 28.0 2.7 25 561-586 71-95 (122)
312 KOG3880 Predicted small molecu 24.7 82 0.0018 32.4 3.6 60 166-231 340-399 (409)
313 TIGR01667 YCCS_YHJK integral m 24.4 4E+02 0.0088 30.9 9.7 52 112-184 43-97 (701)
314 TIGR01666 YCCS hypothetical me 24.3 4.3E+02 0.0094 30.6 9.8 53 112-185 43-98 (704)
315 PHA02902 putative IMV membrane 22.8 1.3E+02 0.0029 22.7 3.5 27 560-586 5-31 (70)
316 COG3202 ATP/ADP translocase [E 22.7 1.1E+03 0.023 26.1 16.2 74 178-256 294-368 (509)
317 COG3256 NorB Nitric oxide redu 22.4 1.2E+03 0.025 26.5 14.1 98 78-177 292-391 (717)
318 PF06779 DUF1228: Protein of u 20.5 4.1E+02 0.0088 21.5 6.3 67 178-253 4-70 (85)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=379.64 Aligned_cols=530 Identities=45% Similarity=0.769 Sum_probs=469.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 039271 51 NKGGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQ 130 (609)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 130 (609)
....|+....++..+.++.+++|++...+..|++++++.+...+...+..+.....+.++++++++|-|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-hhccCCCCCCC--CCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhc
Q 039271 131 LIFVVGLVLLSVLS-FLMIKPTGCGD--GFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQS 207 (609)
Q Consensus 131 ~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (609)
++..+|..++.+.. .|...+++|+. ..+.|..+.......++.++.+..+|.|+..|+..++.+|+|++..+++++.
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 99999987777666 66666555522 2356777777778899999999999999999999999999999877777877
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhh
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARK 287 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (609)
+.+.+.++++..++|..++-.+..++.+..||.+.|.++.+++++++++++...+.+++++|.+++...+.+++.++.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 88999999999999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCC--CCCCCCCcccchhhHHHHHHHHhHHHHHHH
Q 039271 288 WNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDL--AGPKNPWKLCTVTQVEEAKCVLKMLPIWLC 365 (609)
Q Consensus 288 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (609)
++...+.+++.. + .........++.++.+++|++++..+.+. ..+.++|+.|+.+++++.|.+++.++++..
T Consensus 272 ~~~~~~~~~~~~---~---~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~ 345 (571)
T KOG1237|consen 272 RKAVVSLDPEEL---Y---YDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLT 345 (571)
T ss_pred HhccCCCcchhc---c---ccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHH
Confidence 877766664433 1 11112222333566778888877765433 245678999999999999999999999999
Q ss_pred HHHHHHHHhcccceeeEecccccccccc-cccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHH
Q 039271 366 TIIYSVVFTQMASLFVEQGDVMNSHIGE-FRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGL 444 (609)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~ 444 (609)
.+++++.+.|..+.++.|+..++++.+. +..+++.+..+..+...+..++.+++..|+.||+++++.+.+++.++.+|+
T Consensus 346 ~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~ 425 (571)
T KOG1237|consen 346 TIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGL 425 (571)
T ss_pred HHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccc
Confidence 9999999999999999999999999887 999999999999999999999999999999999999887889999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCC-CCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHH
Q 039271 445 IIGMLAMIAAGATEIQRLKYISP-GEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISF 523 (609)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~l 523 (609)
++..++|...+.++..|.+.+.+ ..++++.+++|++++++++|++|++..++.+++.++++|++||+.+++++....++
T Consensus 426 ~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~ 505 (571)
T KOG1237|consen 426 VLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAV 505 (571)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887654 22357899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCCCC-CCCccchhhHHHHHHHHHHHHHHHHHhhhccccccccCC
Q 039271 524 GNYVSSLLVVMVMGITAKGDKPGWIP-DDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKGINLD 588 (609)
Q Consensus 524 g~~ig~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~ 588 (609)
|+.++.+++.++...+.. ..+|+. +++|.++++.+||++++...+....+..+.++++.++.+
T Consensus 506 G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 506 GNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 999999999988877654 458999 899999999999999999999999998888888776544
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=331.54 Aligned_cols=462 Identities=19% Similarity=0.299 Sum_probs=354.7
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhC----CchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHH
Q 039271 52 KGGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQ----QENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCA 127 (609)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~ 127 (609)
-+++|.++.++..+++|+++|||+...+..|++.+++ ++.+++.-+.+.|....++.+.++||++||++|+|+++.
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 3578999999999999999999999999999999888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhc
Q 039271 128 VFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQS 207 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (609)
.|.++.++|+++++.+. . .....++++.+++++|.|...|+..++++|++|+++++
T Consensus 97 lGail~~iGh~~L~~~~--~------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr---- 152 (498)
T COG3104 97 LGAILMAIGHLVLAISS--V------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR---- 152 (498)
T ss_pred HHHHHHHHHHHHHhccc--c------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc----
Confidence 99999999999988761 0 23567899999999999999999999999999999877
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecC--CCCCChh------HHHH
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVK--PCGNPLP------RVAQ 279 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~ 279 (609)
|..+++++|++.|+|++++|++++++.+.+||+..|..+++.+.++++.++..+++..... +...+.. ....
T Consensus 153 rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (498)
T COG3104 153 RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGG 232 (498)
T ss_pred cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHH
Confidence 7788999999999999999999999999999999999999999999999998887765433 2222211 1111
Q ss_pred HHHHHHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHh-hhhcccccCCCCCCCCCcccchhhHHHHHHHHh
Q 039271 280 VFIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLD-KAATITDNDLAGPKNPWKLCTVTQVEEAKCVLK 358 (609)
Q Consensus 280 ~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (609)
.+...+.- + ++. ....+..+... ........-.....-.| .+.. +++++++.
T Consensus 233 ~~~~~~~~-----~-----~~~-------------~l~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~-~er~r~~~ 285 (498)
T COG3104 233 LVVMILAA-----L-----LTL-------------LLNQNTFSGVLLVISILIAIIYFAEAFRS---PKVF-DERRRLLA 285 (498)
T ss_pred HHHHHHHH-----H-----HHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CccH-HHHHHHHH
Confidence 11110000 0 000 00000000000 00000000000000011 1223 67889999
Q ss_pred HHHHHHHHHHHHHHHhcccceeeEecccc-cccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChh
Q 039271 359 MLPIWLCTIIYSVVFTQMASLFVEQGDVM-NSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSEL 437 (609)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 437 (609)
.+++++..++||+.+.|.++.+..+.... +++..++..++++.+++|++.+++++|+..+++.++.++. ++ ++..
T Consensus 286 ~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~-~~---ps~~ 361 (498)
T COG3104 286 AIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN-KQ---PSTP 361 (498)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC-CC---CCcc
Confidence 99999999999999999999887776654 3442457899999999999999999999999999877764 33 3577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHH
Q 039271 438 QRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLC 517 (609)
Q Consensus 438 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 517 (609)
.++.+|+++++++++.+.+..... +.+ .+..+.+|+++.+++.++||.+..|...+++++.+|+.+++..+|+|
T Consensus 362 ~KFalGl~l~g~~fl~l~~~~~~~---~~~---~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~w 435 (498)
T COG3104 362 IKFALGLILAGLGFLILLLAGIWF---GGP---SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMW 435 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh---cCC---CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHH
Confidence 789999999999999988864321 111 34678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhcccccc
Q 039271 518 MASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKG 584 (609)
Q Consensus 518 ~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~ 584 (609)
.+.+..|+.++..+.+.... + . +..+......+|+.++++.++..+..+...|+.++
T Consensus 436 fLt~a~~~~l~g~va~~~~~-~--~-------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r 492 (498)
T COG3104 436 FLTVAAGQTLGGQVAGLTAV-T--D-------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNR 492 (498)
T ss_pred HHHHHHHHHhhceecccccc-c--c-------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999888777663211 0 0 01122334457888888888888877777666544
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3.1e-35 Score=321.33 Aligned_cols=462 Identities=15% Similarity=0.235 Sum_probs=329.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 039271 52 KGGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQL 131 (609)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 131 (609)
++|||.++.+++.+++++++||++..+++.|+++++|++..+++++.+.+....++..+++|+++||++||||+++.+.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999994499999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
++.+++++++++. .....++++|+++++|.|...|+..++++|+||+++++ |++.
T Consensus 90 ~~~~g~~~~~~~~---------------------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~~~ 144 (489)
T PRK10207 90 VLAIGYFMTGMSL---------------------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LDGA 144 (489)
T ss_pred HHHHHHHHHHHhc---------------------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hhcc
Confidence 9999999888761 11234568899999999999999999999999987632 6778
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceec--CCCCCChhHHHHHHHH------
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYV--KPCGNPLPRVAQVFIA------ 283 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------ 283 (609)
+++++++.|+|+.+||.+++++.++.|||+.|++.++..+++++.+...++.+++. +|.+++.+. .+....
T Consensus 145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~l~~~~~~~ 223 (489)
T PRK10207 145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSF-SKLLLVLLGSVV 223 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhh-hhHHHHHHHHHH
Confidence 99999999999999999999999999999999998777666666666655544332 222222211 111000
Q ss_pred -H-HhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHH
Q 039271 284 -A-ARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLP 361 (609)
Q Consensus 284 -~-~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (609)
. ......... ++.... ..............+. ...++ .++++.+....
T Consensus 224 ~~~~~~~~~~~~-~~~~~~-----------------~~~~~~i~~~~f~~~~-----------~~~~~-~~r~r~~~~~~ 273 (489)
T PRK10207 224 MIFVCAWLMHNV-EVANLV-----------------LIVLSIVVTIIFFREA-----------FKLDK-TGRNKMFVAFV 273 (489)
T ss_pred HHHHHHHHHhhh-hHHHHH-----------------HHHHHHHHHHHHHHHH-----------hcCCH-HHHHHHHHHHH
Confidence 0 000000000 000000 0000000000000000 00011 23445555666
Q ss_pred HHHHHHHHHHHHhcccceeeEecc-cccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHH
Q 039271 362 IWLCTIIYSVVFTQMASLFVEQGD-VMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRM 440 (609)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 440 (609)
++....++|..+.|..+.+..+.. ..+....++..++..+.++|++.+++..++.+++.+++.+| +...++..++
T Consensus 274 l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r----~~~~~~~~k~ 349 (489)
T PRK10207 274 LMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSK----GKDLSMPMKF 349 (489)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhC----CCCCCcHHHH
Confidence 677788899999998776655443 34545556777888889999999999999988875555444 3335688889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHH
Q 039271 441 GIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMAS 520 (609)
Q Consensus 441 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 520 (609)
.+|+++.+++++.+...... ..+. ....+.+|+++.+++.++||.+..|+.++++++.+|++++|.++|++++.
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~---~~~~---~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~ 423 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMW---FADA---QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLT 423 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHh---hcCC---CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 99999999898765432211 0111 11356788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccccccc
Q 039271 521 ISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKGI 585 (609)
Q Consensus 521 ~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~ 585 (609)
+++|+.+|..+...... .....++ . .....+.++|..+++.+++..++++++.|+.+|.
T Consensus 424 ~~ig~~lg~~l~~~~~~-~~~~~~~-~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 424 QAAAFLLGGYVATFTAV-PDNITDP-L----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHhcc-ccccccc-h----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888764421 1000000 0 0123456788888888888888887777766554
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=1.5e-33 Score=307.73 Aligned_cols=452 Identities=15% Similarity=0.238 Sum_probs=327.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHh--hCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 039271 53 GGWKYASILLANQGLATLAFFGVGVNLVLFLTRV--LQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQ 130 (609)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 130 (609)
+++|.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++|||+++.++.
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~ 86 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGG 86 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHH
Confidence 5778899999999999999999999999999987 99999999999999999999999999999999449999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccch
Q 039271 131 LIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTL 210 (609)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 210 (609)
++..++.+++++. .+.+.+++++++.|+|.|...|+..++++|++|+++++ .|++
T Consensus 87 ~~~~~g~~~~~~~----------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~~ 141 (475)
T TIGR00924 87 IVLMLGHFMLAMS----------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRDG 141 (475)
T ss_pred HHHHHHHHHHHhc----------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cccc
Confidence 9999988877765 44667888999999999999999999999999876421 1778
Q ss_pred hHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhH-----HHHH-----
Q 039271 211 FFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPR-----VAQV----- 280 (609)
Q Consensus 211 ~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----- 280 (609)
++++++++.|+|+++||.+++++.+.+||++.|++.++..+++.+.++..++.+++.++.+++.+. ..+.
T Consensus 142 ~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (475)
T TIGR00924 142 GFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLA 221 (475)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHH
Confidence 899999999999999999999999989999999998877777766666555554333222211110 0000
Q ss_pred -HHHHHhhcccccCCCchhhhhhcCCcccccCccccccCchhhH-HhhhhcccccCCCCCCCCCcccchhhHHHHHHHHh
Q 039271 281 -FIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEF-LDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLK 358 (609)
Q Consensus 281 -~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (609)
........ .....+. ..+.... ............. ..+. .++ .+.++...
T Consensus 222 ~~~~~~~~~-~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~-~~~~~~~~ 273 (475)
T TIGR00924 222 ALALVFFCA-WLMHHVV--------------------IANILLMTVTLAVIIFFFRLA--FKPR----LDA-VARNKMYA 273 (475)
T ss_pred HHHHHHHHH-HHHhccH--------------------HHHHHHHHHHHHHHHHHHHHH--Hhcc----CCH-HHHhHHHH
Confidence 00000000 0000000 0000000 0000000000000 0000 011 22334445
Q ss_pred HHHHHHHHHHHHHHHhcccceeeE-ecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChh
Q 039271 359 MLPIWLCTIIYSVVFTQMASLFVE-QGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSEL 437 (609)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 437 (609)
.+.+++...++|..+.|..+.+.. +...++.+..++..+.+.+.++|.+.+++++++.+++..++.||. .+.+..
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~----~~~~~~ 349 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKG----KDPTTP 349 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCC----CCCCcH
Confidence 677888889999999998886543 334456666677888999999999999999999887655555441 123466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHH
Q 039271 438 QRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLC 517 (609)
Q Consensus 438 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 517 (609)
.++.+|+++.+++++.++.... ..++ ....+.+|+++++++.++||.+..|..++++++.+|+++||+++|++
T Consensus 350 ~k~~~G~~l~~~~~~~~~~~~~----~~~~---~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~ 422 (475)
T TIGR00924 350 LKFTLGMLFCGASFLTFAASIW----FADA---GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMW 422 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----hcCC---CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHH
Confidence 6889999999999988876522 1221 23568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhcccccc
Q 039271 518 MASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKG 584 (609)
Q Consensus 518 ~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~ 584 (609)
.....+|+.+++.+....... .++.++|...++++++..++++++.|+.+|
T Consensus 423 ~l~~~~g~~l~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 473 (475)
T TIGR00924 423 FLAQAMGSLLGGYLATFGAVP----------------QGVTGVFGKIGLVTLLVGVVMALMVPWLNR 473 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhcc----------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998887754321 123456777777777777777766665443
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=5e-33 Score=299.96 Aligned_cols=426 Identities=15% Similarity=0.217 Sum_probs=306.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 53 GGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
+|+|.++.++..++++++++|++..+++.|+++.+|++..+++.+.+.+....+++++++|+++||++||||++.++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999955999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..++.+++... . .+...++++..+..+|.|...++..++++|+||+++++ |.+++
T Consensus 86 ~~lg~lll~~~--~-------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf 140 (493)
T PRK15462 86 MAIGHVVLGAS--E-------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGF 140 (493)
T ss_pred HHHHHHHHHHh--h-------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----cccee
Confidence 88888766543 0 11223445555666788888888899999999987433 88899
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceec---CCCCCChhHHHHHHHHHHhhcc
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYV---KPCGNPLPRVAQVFIAAARKWN 289 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
+++|...|+|+.++|.+++++.+.+||++.|.++++.++++++.++..++.+.+. +|++.+.++..........---
T Consensus 141 ~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (493)
T PRK15462 141 SLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLL 220 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998887777777766655554332 1111111110000000000000
Q ss_pred cccCCCchhhhhhcCCcccccCccccccCchhhHH-hhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHH
Q 039271 290 VVVPANSDELYEVAGPESAIKGSRKILHSNEIEFL-DKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTII 368 (609)
Q Consensus 290 ~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (609)
...+ ...... ..+. ..... -........ . .. +....+...+|++++...+.++....+
T Consensus 221 ~~~~---~~~~~~------------~~~~-~~~~~~~~~~~~~~~-~---~~-~~~~~~~~~~er~r~~~~~~l~~~~~~ 279 (493)
T PRK15462 221 VATP---ALITVL------------FWKE-WSVYALIVATIIGLG-V---LA-KIYRKAENQKQRKELGLIVTLTFFSML 279 (493)
T ss_pred HHHH---HHHHHH------------HHHH-HHHHHHHHHHHHHHH-H---HH-HHHHhcCCHHHHhhHHHHHHHHHHHHH
Confidence 0000 000000 0000 00000 000000000 0 00 000000122567788888899999999
Q ss_pred HHHHHhcccceeeEec-ccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHH
Q 039271 369 YSVVFTQMASLFVEQG-DVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIG 447 (609)
Q Consensus 369 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~ 447 (609)
||..|+|.++.+.... .++|+++.++..++.+..++|++.+++++|+..+++.++.+| +| ..+...++.+|+++.
T Consensus 280 Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~--~~--~~s~~~Kfa~g~~~~ 355 (493)
T PRK15462 280 FWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG--NR--TVRIWGKFALGLGLM 355 (493)
T ss_pred HHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC--CC--CCCcHHHHHHHHHHH
Confidence 9999999998765433 456777778899999999999999999999999886655433 11 245777899999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHH-HHHHHH
Q 039271 448 MLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMAS-ISFGNY 526 (609)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~lg~~ 526 (609)
+++++.+...... .++. ...+.+|++..++++++||....|...+++.+.+|++.+|+.+|++... ..+|+.
T Consensus 356 g~~f~~l~~~~~~----~~~~---~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~ 428 (493)
T PRK15462 356 SAGFCILTLSARW----SAMY---GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANY 428 (493)
T ss_pred HHHHHHHHHHHhh----cCCC---CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888764421 1111 2468899999999999999999999999999999999999999999875 468888
Q ss_pred HHHHHHHHh
Q 039271 527 VSSLLVVMV 535 (609)
Q Consensus 527 ig~~~~~~i 535 (609)
++..+....
T Consensus 429 ~~g~~~~~~ 437 (493)
T PRK15462 429 LAGVIADQT 437 (493)
T ss_pred HHHHHHHHh
Confidence 877776644
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=1.1e-32 Score=302.66 Aligned_cols=457 Identities=16% Similarity=0.241 Sum_probs=323.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 53 GGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
+++|.++.+++.++++++++|++.++++.|+++++|++..+++++.+.+........+++|+++||++|||+++..+.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 46678999999999999999999999999999999999999999998888888888889999999933999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
+.++..+++++ ..+.+.++++++++++|.|...++..++++|++|+++++ |..++
T Consensus 98 ~~ig~~l~~~~---------------------~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~~~~ 152 (500)
T PRK09584 98 LAIGYALVAWS---------------------GHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LDGAF 152 (500)
T ss_pred HHHHHHHHHHh---------------------cccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hhhcc
Confidence 99888777765 123456778889999999999999999999999876532 55678
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceec--CCCCCChhH--HHH----HH-HH
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYV--KPCGNPLPR--VAQ----VF-IA 283 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~----~~-~~ 283 (609)
++++++.|+|+.+||.+++++.+.+||++.|++.++..+++++.++..++.++++ +|..++.+. ... .. ..
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALI 232 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998877776665554444333332 222222211 100 00 00
Q ss_pred HHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHH
Q 039271 284 AARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIW 363 (609)
Q Consensus 284 ~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (609)
.........++........ ........... ..+..++ .+.++.+..+.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~--------------~~~~~~~-~~~~~~~~~~~~~ 282 (500)
T PRK09584 233 AIATWLLHNQEIARMALGV---------------VALGIVVIFGK--------------EAFAMKG-AARRKMIVAFILM 282 (500)
T ss_pred HHHHHHHhcchHHHHHHHH---------------HHHHHHHHHHH--------------HHhhcCH-HHHHHHHHHHHHH
Confidence 0010000000000000000 00000000000 0000111 3455555666777
Q ss_pred HHHHHHHHHHhcccceeeEeccc-ccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHH
Q 039271 364 LCTIIYSVVFTQMASLFVEQGDV-MNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGI 442 (609)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 442 (609)
+..+++|..+.|.++.+..+... .+....++..+.+.+.++|++.+++++++.++...++.+|. ++..++.+
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-------~~~~~~~~ 355 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-------PMPHKFAI 355 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-------CcHHHHHH
Confidence 88899999999999987765433 44455567788899999999999999999988765555442 36678999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHH
Q 039271 443 GLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASIS 522 (609)
Q Consensus 443 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 522 (609)
|+++++++++.+...... .++ ....+.+|+++.+++.++||++..|...+++.+.+|+++||+++|++.....
T Consensus 356 G~~l~~l~f~~l~~~~~~----~~~---~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a 428 (500)
T PRK09584 356 GMVLCSGAFLVLPLGAKF----AND---AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTA 428 (500)
T ss_pred HHHHHHHHHHHHHHHHHh----cCC---CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 999999999988775432 111 2246778999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCCCCC-CccchhhHHHHHHHHHHHHHHHHHhhhccccccc
Q 039271 523 FGNYVSSLLVVMVMGITAKGDKPGWIPDD-LNTGHMDRFYFLLAVLTAFDFVIYLICANWYKGI 585 (609)
Q Consensus 523 lg~~ig~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~ 585 (609)
+|+.++..+...... +.-..+- ...+.+.++|..+++++++.++++++..++.+|.
T Consensus 429 ~g~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 429 GAALIAGYVANLMAV-------PDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHhcc-------ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888777653321 0000000 1122356788888888777777777777766554
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.95 E-value=2.6e-25 Score=247.98 Aligned_cols=336 Identities=25% Similarity=0.462 Sum_probs=269.1
Q ss_pred HHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccC
Q 039271 70 LAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIK 149 (609)
Q Consensus 70 ~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (609)
++||++...+..|+++.+|.+.+++..+...+.....+.++++|+++|+++||++++.++.++..+|.+++++...|...
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999888876433211
Q ss_pred CCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhh
Q 039271 150 PTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTI 229 (609)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i 229 (609)
........+++..+..+|.|++.|+..++.+|+++++++ +.|.+++.++|+++|+|+++++++
T Consensus 81 --------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i 143 (654)
T TIGR00926 81 --------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTII 143 (654)
T ss_pred --------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012344577888899999999999999999999986432 227789999999999999999999
Q ss_pred hhhcccc-------cchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhhh
Q 039271 230 LVYYEDS-------GKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYEV 302 (609)
Q Consensus 230 ~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 302 (609)
.+++.+. .+|..+|.+++++++++++++...++++++++|.+++..+..+++..+++++....++.
T Consensus 144 ~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~------- 216 (654)
T TIGR00926 144 TPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH------- 216 (654)
T ss_pred HHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc-------
Confidence 9988743 36999999999999999999888888887777777666666666655554432110000
Q ss_pred cCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccceeeE
Q 039271 303 AGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASLFVE 382 (609)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (609)
....+++.+... + ..+++++.+++++.+.+++...++|..+.|..+.+..
T Consensus 217 ----------------~~~~~ld~a~~~-----------~---~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~ 266 (654)
T TIGR00926 217 ----------------WPLHWLDYAKDK-----------H---DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTL 266 (654)
T ss_pred ----------------cchhHHHHhccc-----------c---ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 002233332111 1 1235678899999999999999999999999999888
Q ss_pred ecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039271 383 QGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRL 462 (609)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 462 (609)
|...++.+++++..+...+..++.+.++++.++.++.+.+..+|.+.+ .++..++++|++++++++++....+..+.
T Consensus 267 qa~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~~~~ 343 (654)
T TIGR00926 267 QATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQLKVN 343 (654)
T ss_pred HHHHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888887777777888999999999999999999998888777765432 46899999999999999998888776555
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.95 E-value=1.8e-25 Score=252.08 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=132.1
Q ss_pred HHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 039271 76 GVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGD 155 (609)
Q Consensus 76 ~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (609)
...+.+++.+++|++..+.+++.+++.++..++.+++|+++||+ |||++++++.++.+++.++++++
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa------------ 252 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFV------------ 252 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHH------------
Confidence 34455567788999999999999999999999999999999995 99999999999988888887776
Q ss_pred CCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc
Q 039271 156 GFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~ 235 (609)
.+++.++++|++.|++.++..+...++++|.+|++. |+..++++..+..+|.++++.++..+..
T Consensus 253 ----------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 253 ----------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568889999999999999999999999999999888 9999999999999999999887655442
Q ss_pred c-------------cchhHHHHHHHHHHHHHHHHHHh
Q 039271 236 S-------------GKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 236 ~-------------~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
. .+||+.|++.++..++.++..++
T Consensus 317 ~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred hccchhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 2 36899888877766665554444
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=5.8e-24 Score=226.95 Aligned_cols=373 Identities=12% Similarity=0.044 Sum_probs=242.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
|..++.+.+..+......+...+.+| .+.+++|.+..+.+++.+.+.++..++.++.|.++||+ ||||++..+.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 44455555555555444443333444 56778999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.+.+.++ ++.+.++++|+++|++.+...+...+++.|++|+++ |++.+++
T Consensus 86 ~~~~~~~~~----------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~ 137 (390)
T PRK03545 86 ASHVLSALA----------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSL 137 (390)
T ss_pred HHHHHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHH
Confidence 998888877 678899999999999999888999999999999888 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCC
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPA 294 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 294 (609)
+..+.++|..++|.+++.+.+..|||+.|++.++..++..+......|+.++++ +++.++
T Consensus 138 ~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~------------------ 197 (390)
T PRK03545 138 LATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEH--SGSLKS------------------ 197 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cchHHH------------------
Confidence 999999999999999999988899999999988766655444333222211100 000000
Q ss_pred CchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHH-hHHHHHHHHHHHHHHH
Q 039271 295 NSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVL-KMLPIWLCTIIYSVVF 373 (609)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 373 (609)
..+ +...+.+. .....++.....+..+
T Consensus 198 ----------------------------~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (390)
T PRK03545 198 ----------------------------LPL------------------------LFRRPALVSLYLLTVVVVTAHFTAY 225 (390)
T ss_pred ----------------------------HHH------------------------HHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000111 1111111111112222
Q ss_pred hcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 039271 374 TQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIA 453 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (609)
.....++.. ..+.+ ....+.+.....+..++...+.+++ .+|..++ .+..+..+..+++..
T Consensus 226 ~~~~~~l~~-~~g~s------~~~~~~~~~~~~~~~~~g~~~~g~l----~dr~~~~--------~~~~~~~~~~~~~~~ 286 (390)
T PRK03545 226 SYIEPFVQQ-VAGLS------ENFATLLLLLFGGAGIIGSVLFSRL----GNRHPSG--------FLLIAIALLLVCLLL 286 (390)
T ss_pred HHHHHHHHH-hcCCC------ccHHHHHHHHHHHHHHHHHHHHHHH----hhccchh--------HHHHHHHHHHHHHHH
Confidence 222222111 01111 1112333344444555555555554 3443221 244455544444443
Q ss_pred HHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039271 454 AGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVV 533 (609)
Q Consensus 454 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~ 533 (609)
.... ..+.+.++...++.|++.....+.....+.+..| +.|++++|+++....+|..+|+.+.+
T Consensus 287 l~~~---------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 287 LLPA---------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred HHHH---------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221 1234455566677888887777777788888877 57899999999999999999999999
Q ss_pred HhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 039271 534 MVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICAN 580 (609)
Q Consensus 534 ~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~ 580 (609)
.+.+.. ++...|++.+++.++++++.+...+
T Consensus 351 ~~~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 351 QVSLHL----------------GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcc----------------ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 876422 2334677778887777777665553
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=2.1e-24 Score=236.52 Aligned_cols=435 Identities=13% Similarity=0.071 Sum_probs=241.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh--------CCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVL--------QQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCA 127 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~ 127 (609)
+.++...+..+...+....+.+..+ .+++.+ +.+..+.+++.+++.++..++++++|+++||+ ||||+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~ 89 (479)
T PRK10077 12 SITLVATLGGLLFGYDTAVISGTVE-SLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHhcCcccceehHhHH-HHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHH
Confidence 3444444444444444333333333 244444 88899999999999999999999999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhc
Q 039271 128 VFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQS 207 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (609)
.+.+++.++.+..++..+.... ....+......++++|+++|++.|...+...++++|++|+++
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------ 153 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTS----------IGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------ 153 (479)
T ss_pred HHHHHHHHHHHHHHhhcccccc----------ccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------
Confidence 9999988887766653211000 000011335678899999999999999999999999999988
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhhhcc--------cccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHH
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILVYYE--------DSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQ 279 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~~l~--------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (609)
|++.+++...+..+|.++++++++.+. +..|||+.|++.++..++..+..++. |+.++.....++.++..+
T Consensus 154 rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l-~~s~~~l~~~~~~~~~~~ 232 (479)
T PRK10077 154 RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFV-PETPRYLMSRGKQEQAEG 232 (479)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcC-CCCcHHHHHcCCHHHHHH
Confidence 999999999999999999887765442 45789999998877666655444333 221110000011110000
Q ss_pred HHHHHHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhH
Q 039271 280 VFIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKM 359 (609)
Q Consensus 280 ~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (609)
..++.. .+ .+.....+........ +....+..+..
T Consensus 233 ----~~~~~~--~~------------------------~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 267 (479)
T PRK10077 233 ----ILRKIM--GN------------------------TLATQALQEIKHSLDH---------------GRKTGGKLLMF 267 (479)
T ss_pred ----HHHHHc--CC------------------------hhHHHHHHHHHHHHHH---------------hhhhhhhhcch
Confidence 000000 00 0000000000000000 00000000000
Q ss_pred HHHHHHHHHHHHHHhccc---------ceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCC
Q 039271 360 LPIWLCTIIYSVVFTQMA---------SLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGN 430 (609)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 430 (609)
........+....+.+.. +.+.. ..+.+ ............+..++...+..++. +|+++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~-~~g~~------~~~~~~~~~~~~~~~~i~~~~~g~l~----dr~g~r 336 (479)
T PRK10077 268 GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFK-TLGAS------TDIALLQTIIVGVINLTFTVLAIMTV----DKFGRK 336 (479)
T ss_pred hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHH-HcCCC------CchHHHHHHHHHHHHHHHHHHHHHHH----HHhcCh
Confidence 000000000000011110 00000 00111 01112222233344444445555543 343322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhh-hhhhHHHhhhcCCcch
Q 039271 431 PKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFM-YVGQLEFFNGQAPDGI 509 (609)
Q Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~-~~~~~~~~~~~~p~~~ 509 (609)
..+..+.++++++++.+..... ......+.+...++.+.+.... .|..+.++.|.+|++.
T Consensus 337 -------~~~i~~~~~~~v~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 397 (479)
T PRK10077 337 -------PLQIIGALGMAIGMFSLGTAFY------------TQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI 397 (479)
T ss_pred -------HHHHHhHHHHHHHHHHHHHHHh------------cCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH
Confidence 3467777777777776654321 1112223333344444444432 3666788999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccccccccCCc
Q 039271 510 KSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKGINLDE 589 (609)
Q Consensus 510 r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~~ 589 (609)
|++++|+.+..+.+++.+++.+.+.+.+ ++|+.++. +....|+++++++++++++.+++.+++|++++||
T Consensus 398 r~~~~g~~~~~~~~g~~~~~~~~p~~~~-------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 467 (479)
T PRK10077 398 RGKALAIAVAAQWIANYFVSWTFPMMDK-------NSWLVAHF---HNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEE 467 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHh-------ccchhhhc---cCccHHHHHHHHHHHHHHHHHhccccCCCCCHHH
Confidence 9999999999999999999887765431 12322211 1223567777777777777777788888877765
Q ss_pred hhhHH
Q 039271 590 DSCEK 594 (609)
Q Consensus 590 ~~~~~ 594 (609)
.++..
T Consensus 468 ~~~~~ 472 (479)
T PRK10077 468 MEALW 472 (479)
T ss_pred HHHHH
Confidence 54443
No 11
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=2.3e-23 Score=222.88 Aligned_cols=376 Identities=11% Similarity=0.021 Sum_probs=245.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
+|.+..+++..+...++.....+.++.|+.+++|.+..+.+++.+.+.+...+++++.|+++||+ ||||++..+.++..
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHH
Confidence 45777788888888888888889999999999999999999999999999999999999999996 99999999998887
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.+.+.+...... ....+.+.+++.|+++|++.+...+...+++.|.+|+++ |++..++
T Consensus 93 ~~~~~~~~~~~~~~--------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~ 152 (399)
T PRK05122 93 LSGLLYLLAGLLAA--------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISW 152 (399)
T ss_pred HHHHHHHHhhhhhc--------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhh
Confidence 77665554421100 001346788999999999999999999999999999888 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCC
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPA 294 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 294 (609)
+....++|..+|+.+++++.+..||++.+++.++..++..+.. ++. ++.++.+++..
T Consensus 153 ~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~------------------- 209 (399)
T PRK05122 153 NGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RPR-PAVPPVKGERL------------------- 209 (399)
T ss_pred hhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hcC-CCCCCCCccch-------------------
Confidence 9999999999999999999988999998877665544333222 111 11010000000
Q ss_pred CchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhH-HHHHHHHHHHHHHH
Q 039271 295 NSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKM-LPIWLCTIIYSVVF 373 (609)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 373 (609)
++. +..+..+.. ....+....+....
T Consensus 210 ---------------------------~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
T PRK05122 210 ---------------------------PFR--------------------------RVLGRVWPYGMGLALASIGFGTIA 236 (399)
T ss_pred ---------------------------hHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000000000 00111111111111
Q ss_pred hcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 039271 374 TQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIA 453 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (609)
...+.++..+ +.+ ..........+..++...+.+++ .+|+++ ...+..+.++.+++++.
T Consensus 237 ~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~g~l----~~r~~~-------~~~~~~~~~~~~~~~~~ 295 (399)
T PRK05122 237 TFITLYYAAR--GWD--------GAALALTLFGVAFVGARLLFGNL----INRLGG-------LRVAIVSLLVEILGLLL 295 (399)
T ss_pred HHHHHHHHHc--ccc--------cchHHHHHHHHHHHHHHHHHHHH----HHHhcc-------HHHHHHHHHHHHHHHHH
Confidence 1111111110 100 11112223333334444444444 344322 22355666666666655
Q ss_pred HHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039271 454 AGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVV 533 (609)
Q Consensus 454 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~ 533 (609)
+... .+.++.+...++.|++.....+.....+.+..|++.|++++|+++....+|..+++.+.+
T Consensus 296 ~~~~----------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 359 (399)
T PRK05122 296 LWLA----------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAG 359 (399)
T ss_pred HHHh----------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5442 134445566778888888888887788889999999999999999999999999888888
Q ss_pred HhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 039271 534 MVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICAN 580 (609)
Q Consensus 534 ~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~ 580 (609)
.+.+.. ++...|++.+++.+++.++.+++.+
T Consensus 360 ~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 360 LVASWF----------------GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHc----------------CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 775421 2445677777777776665554433
No 12
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.5e-23 Score=214.10 Aligned_cols=379 Identities=16% Similarity=0.100 Sum_probs=268.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 039271 52 KGGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQL 131 (609)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 131 (609)
+..|..++.+.++.|..+..-+...+.+|. +.+++|+|..++|+.++.|..+..++.|+...+.||+ .||++++....
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 345778888888999999888888888876 5678999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
+++++.++.+++ +|++.++++|++.|+..|.+.+...++.+++.|+++ |+++
T Consensus 87 lFi~~n~l~alA----------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~A 138 (394)
T COG2814 87 LFIVSNLLSALA----------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRA 138 (394)
T ss_pred HHHHHHHHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhH
Confidence 999999999999 789999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCC-cceecCCCCCChhHHHHHHHHHHhhccc
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTP-GYRYVKPCGNPLPRVAQVFIAAARKWNV 290 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (609)
.++...+..++..+|..++.++.+.+|||+.|+..+++.+++++..+...| +.+.+++.. +..+..
T Consensus 139 iaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~-~~~~~~------------ 205 (394)
T COG2814 139 LALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPG-PLRTLL------------ 205 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCc-chhHHH------------
Confidence 999999999999999999999999999999999999888888777666555 111111000 000000
Q ss_pred ccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHH
Q 039271 291 VVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYS 370 (609)
Q Consensus 291 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (609)
+. .++-+....++..++.....+
T Consensus 206 ----------------------------------~~-----------------------l~~p~v~~~l~~t~l~~~g~F 228 (394)
T COG2814 206 ----------------------------------RL-----------------------LRRPGVLLGLLATFLFMTGHF 228 (394)
T ss_pred ----------------------------------HH-----------------------hcCchHHHHHHHHHHHHcchh
Confidence 00 000011122233333344444
Q ss_pred HHHhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHH
Q 039271 371 VVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLA 450 (609)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~ 450 (609)
..|.+..+++.... +++ .....++.....+..++...+.+++ .+| . ++..+.....+.++.
T Consensus 229 ~~ftYi~P~L~~v~-g~s------~~~vs~~Ll~~Gv~~~~Gn~~gGrl----~dr-~-------~~~~l~~~~~l~a~~ 289 (394)
T COG2814 229 ALYTYIRPFLESVA-GFS------VSAVSLVLLAFGIAGFIGNLLGGRL----ADR-G-------PRRALIAALLLLALA 289 (394)
T ss_pred hhHHhHHHHHHHcc-CCC------HhHHHHHHHHHHHHHHHHHHHHhhh----ccc-c-------chhHHHHHHHHHHHH
Confidence 55554444443321 111 1122334444555555555555554 344 1 223455555666666
Q ss_pred HHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHH
Q 039271 451 MIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSL 530 (609)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~ 530 (609)
++.+.+. +.+.+..+...++.+++........+....+..| +.++.+++++....++|..+|.+
T Consensus 290 ~l~l~~~---------------~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~~~~a~sl~~aa~nlgia~GA~ 353 (394)
T COG2814 290 LLALTFT---------------GASPALALALLFLWGFAFSPALQGLQTRLARLAP-DAADLAGSLNVAAFNLGIALGAA 353 (394)
T ss_pred HHHHHHh---------------cchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-CchHHHHHHHHHHHHHHHHHHHH
Confidence 6666553 2233444445555666666655666566656444 56999999999999999999999
Q ss_pred HHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccc
Q 039271 531 LVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANW 581 (609)
Q Consensus 531 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~ 581 (609)
+.+.+.+. .++....++.++..++++++.+...+.
T Consensus 354 lGG~v~~~----------------~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 354 LGGLVLDA----------------LGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHh----------------hchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99988752 233445677777777776666555443
No 13
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.93 E-value=8.5e-24 Score=233.27 Aligned_cols=180 Identities=14% Similarity=0.124 Sum_probs=134.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-----hCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRV-----LQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVF 129 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~ 129 (609)
++.+..+.+..+...+....+....+. +.++ .+.+..+.+++.+...++..++.+++|+++||+ |||+++.++
T Consensus 15 ~~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~ 92 (502)
T TIGR00887 15 FRAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHH
Confidence 344444555555555554444444443 3332 234556778999999999999999999999996 999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccc
Q 039271 130 QLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKT 209 (609)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 209 (609)
.++..++.++.+++ ++.. +..+.+.++++|++.|++.|...+....+++|.+|+++ |+
T Consensus 93 ~~~~~v~~~~~~~~--~~~~--------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg 150 (502)
T TIGR00887 93 LIIMIIATVASGLS--PGSS--------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RG 150 (502)
T ss_pred HHHHHHHHHHHHHc--cCcc--------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HH
Confidence 99988888777665 1100 00236789999999999999999999999999999999 99
Q ss_pred hhHHHHHHHHhhhHHHHhhhhhhccc-----------------------ccchhHHHHHHHHHHHHHHHHHH
Q 039271 210 LFFCYFYFFLNVGSLFSNTILVYYED-----------------------SGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 210 ~~~~~~~~~~~ig~~~~~~i~~~l~~-----------------------~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
+..++.+...++|..+++.++.++.. .++||+.|.+.++..++.++..+
T Consensus 151 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~ 222 (502)
T TIGR00887 151 AMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRL 222 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998887765421 24799999887766655544443
No 14
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=1.3e-23 Score=226.25 Aligned_cols=393 Identities=13% Similarity=0.042 Sum_probs=247.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 039271 59 SILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLV 138 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 138 (609)
..++...++..++.......+|.+. ++++.+..+.|++.+...+...++.++.|+++||+ |||+++..+.++..++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~ 97 (417)
T PRK10489 20 RAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFI 97 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHH
Confidence 3444455566666555556666665 45778999999999999999999999999999996 999999988877777666
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
++....... ..+++.+++.|++.|++.+...++..+++.|.+|+++ |++..++.+..
T Consensus 98 ~~~~~~~~~-----------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 154 (417)
T PRK10489 98 GLALNAFLP-----------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLT 154 (417)
T ss_pred HHHHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHH
Confidence 554321110 1456778889999999988888888999999999877 88999999999
Q ss_pred HhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchh
Q 039271 219 LNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDE 298 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 298 (609)
.++|..+||.+++.+.+..+|++.|++.++..+++.+..+..++..+.+++..++..
T Consensus 155 ~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------------------- 211 (417)
T PRK10489 155 VRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLR----------------------- 211 (417)
T ss_pred HhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchH-----------------------
Confidence 999999999999999888899999988877666655544332211000000000000
Q ss_pred hhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccc
Q 039271 299 LYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMAS 378 (609)
Q Consensus 299 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (609)
+..+. ++ .+...+.+.......+............+.
T Consensus 212 -----------------------~~~~~---------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 248 (417)
T PRK10489 212 -----------------------SLLAG---------------FR-----FLLASPVVGGIALLGGLLTMASAVRVLYPA 248 (417)
T ss_pred -----------------------HHHHH---------------HH-----HHHcChHHHHHHHHHHHHHHHHhHHHhhHH
Confidence 00000 00 000001111111111111111111111111
Q ss_pred eeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 039271 379 LFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATE 458 (609)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 458 (609)
+. .+..+.+ ....+.+.....++.++...+.+++ .+|.. +...+..+.++..++++.+...
T Consensus 249 ~~-~~~~g~~------~~~~g~~~~~~~~g~~ig~~~~~~l----~~~~~-------~~~~l~~~~~~~~~~~~~~~~~- 309 (417)
T PRK10489 249 LA-DEVWQMG------AAQIGLLYAAVPLGAALGALTSGWL----AHSAR-------PGLLMLLSTLGSFLAVGLFGLM- 309 (417)
T ss_pred HH-HhccCCC------hhHhHHHHHHHHHHHHHHHHHHHHh----hhccC-------cchHHHHHHHHHHHHHHHHHcc-
Confidence 11 1111111 1123334444445555555555443 23311 1223556666666666555432
Q ss_pred HhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039271 459 IQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGI 538 (609)
Q Consensus 459 ~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~ 538 (609)
.+.+......++.+++.+...+...+++.+..|++.||+++|++++...+|+.+|+.+.+.+.+.
T Consensus 310 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~ 374 (417)
T PRK10489 310 ---------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM 374 (417)
T ss_pred ---------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH
Confidence 23444555667778887777777778889999999999999999999999999999999988753
Q ss_pred cccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccccccccCCchhh
Q 039271 539 TAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKGINLDEDSC 592 (609)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~~~~~ 592 (609)
. ++...+++.+++.++..++.+...+++|++++||.+.
T Consensus 375 ~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 375 M----------------TPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred h----------------chhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 2 1223466667666666666667778888877776553
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=5.7e-23 Score=220.28 Aligned_cols=357 Identities=13% Similarity=0.079 Sum_probs=229.6
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
+|..+...+...+++.+..+......| .+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 90 (406)
T PRK11551 13 LALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALF 90 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 455566666677777777766655555 45678999999999999999999999999999999996 9999999999888
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+++.+. .+++.+++.|++.|++.+...+...+++.|.+|+++ |++.++
T Consensus 91 ~~~~~~~~~~----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~ 142 (406)
T PRK11551 91 GLFSLATAQA----------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTAVS 142 (406)
T ss_pred HHHHHHHHHh----------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHHHH
Confidence 8777766665 567888999999999999999999999999999888 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccC
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVP 293 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 293 (609)
+++...++|+.+++.+++.+.+..+|++.|++.+++.++..++.....++.++.+++.....
T Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------ 204 (406)
T PRK11551 143 LMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK------------------ 204 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch------------------
Confidence 99999999999999999888888999999998776555444433332222111000000000
Q ss_pred CCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHH
Q 039271 294 ANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVF 373 (609)
Q Consensus 294 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (609)
+ +....+.. ++ +....+........+......+...
T Consensus 205 -~------------------------~~~~~~~~--------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (406)
T PRK11551 205 -Q------------------------RAPVLRAL--------------FG-----EGRATATLLLWISYFFTLIVLYFLL 240 (406)
T ss_pred -h------------------------hhhhHHHH--------------hh-----hhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000 00 0000011111111111112222222
Q ss_pred hcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 039271 374 TQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIA 453 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (609)
.+.+.++.. .+.+ ....+.......+..++...+.+++.+++++| ..+..+.+...++++.
T Consensus 241 ~~~p~~~~~--~g~s------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~~~ 301 (406)
T PRK11551 241 NWLPSLLVG--QGLS------RSQAGLVQIAFNIGGALGSLLIGALMDRLRPR-----------RVVLLIYAGILASLAA 301 (406)
T ss_pred HHHHHHHHh--CCCC------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHHHHHHHHHHHH
Confidence 222222211 1111 11223344444455555555655554433332 2233344444444444
Q ss_pred HHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039271 454 AGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVV 533 (609)
Q Consensus 454 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~ 533 (609)
+... .+.+.+....++.+++.....+...++..+.+|++.|+++.|+.++...+|+.+|+.+.+
T Consensus 302 ~~~~----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g 365 (406)
T PRK11551 302 LAAA----------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAG 365 (406)
T ss_pred HHhc----------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHh
Confidence 4332 133344445566777666677788889999999999999999999999999999999998
Q ss_pred Hhhh
Q 039271 534 MVMG 537 (609)
Q Consensus 534 ~i~~ 537 (609)
.+.+
T Consensus 366 ~l~~ 369 (406)
T PRK11551 366 QLLA 369 (406)
T ss_pred hhhc
Confidence 7653
No 16
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=8.9e-23 Score=217.86 Aligned_cols=374 Identities=11% Similarity=0.011 Sum_probs=241.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
.+.++.+.+..++..++.....+.+|.|+.+++|.|..+.+++.+.+.+...+++++.|+++||+ ||||+++.+.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACG 92 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHH
Confidence 45667777777777777777788899999999999999999999999999999999999999996 99999999988776
Q ss_pred HHHHHHHHHh-hhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 135 VGLVLLSVLS-FLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 135 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
++.+...... .+.. ...+++.++++|+++|++.+...+...+.+.|.+|+++ |+++++
T Consensus 93 ~~~~~~~~~~~~~~~---------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~~ 151 (392)
T PRK12382 93 LAGLAYLLAAILPVS---------------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVMS 151 (392)
T ss_pred HHHHHHHhhhccccc---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhhh
Confidence 6554333221 1110 01467889999999999999888888899999999888 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccC
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVP 293 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 293 (609)
+++.+.++|..++|.+++++.+.+||++.+++..+..++.+... . +.++.+++++...
T Consensus 152 ~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~------------------ 209 (392)
T PRK12382 152 WNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFN-G---TVRKVPAHAGERP------------------ 209 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHH-H---hccCCCCCcccCc------------------
Confidence 99999999999999999999888999987766544433222211 1 1111111000000
Q ss_pred CCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHH
Q 039271 294 ANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVF 373 (609)
Q Consensus 294 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (609)
+..+. .+..+.. .....+....+....
T Consensus 210 ----------------------------~~~~~-----------------------~~~~~~~--~~~~~l~~~~~~~~~ 236 (392)
T PRK12382 210 ----------------------------SLWSV-----------------------VGLIWKP--GLGLALQGVGFAVIG 236 (392)
T ss_pred ----------------------------hHHHH-----------------------HHHHHHh--HHHHHHHHHHHhHHH
Confidence 00000 0000000 000111111111111
Q ss_pred hcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 039271 374 TQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIA 453 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (609)
...+.++... +. . ..........+..++..++.+++. +|+++++ .+..+..+.+++++.
T Consensus 237 ~~~~~~~~~~--~~-------~-~~~~~~~~~~~~~~~~~~~~g~l~----~r~g~~~-------~~~~~~~~~~~~~~~ 295 (392)
T PRK12382 237 TFVSLYFASK--GW-------A-MAGFTLTAFGGAFVLMRVLFGWMP----DRFGGVK-------VAIVSLLVETVGLLL 295 (392)
T ss_pred HHHHHHHHhc--CC-------c-hhHHHHHHHHHHHHHHHHHHHHHH----HhcCCCe-------ehHHHHHHHHHHHHH
Confidence 1111111110 00 0 011222233334444555555543 4433322 245566666666655
Q ss_pred HHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039271 454 AGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVV 533 (609)
Q Consensus 454 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~ 533 (609)
+... .+.+..+...++.+++.+...+.....+.+.+|++.|+++.|++++...+|+.+++.+.+
T Consensus 296 ~~~~----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 359 (392)
T PRK12382 296 LWLA----------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAG 359 (392)
T ss_pred HHHc----------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5442 133445556677888888888888888889999999999999999999999999999999
Q ss_pred HhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhh
Q 039271 534 MVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLIC 578 (609)
Q Consensus 534 ~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~ 578 (609)
.+.+.. ++...|.+.+++.+++.++.++.
T Consensus 360 ~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 360 MLATSF----------------GYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHh----------------CchHHHHHHHHHHHHHHHHHHhh
Confidence 876532 23446777777777776665543
No 17
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=5e-23 Score=220.48 Aligned_cols=348 Identities=13% Similarity=0.104 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 039271 59 SILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLV 138 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 138 (609)
+.++...++.+.+++.+.++++.|+++++|.+..++|++.+...+...+..+++|+++||+ |||+++..+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 6677888899999999999999999999999999999999999999999999999999995 999999999999988888
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
++... ++.+.+++.|++.|++.+...|...+++.|.+|+++ |+++.++.+..
T Consensus 92 ~~~~~----------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~~ 143 (400)
T PRK11646 92 TMAIA----------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMMQ 143 (400)
T ss_pred HHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHH
Confidence 77765 567888999999999999888999999999999887 99999999999
Q ss_pred HhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchh
Q 039271 219 LNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDE 298 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 298 (609)
.++|..+||.+++++. .+||++.|++.++..++..++.....++.+. ++..++..
T Consensus 144 ~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~----------------------- 198 (400)
T PRK11646 144 DSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-STVRTPVR----------------------- 198 (400)
T ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-cccchhhH-----------------------
Confidence 9999999999999998 6899999998876665554433332222100 00000000
Q ss_pred hhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccc
Q 039271 299 LYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMAS 378 (609)
Q Consensus 299 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (609)
.++.+ ..++ +.+......+. .++..+.+...
T Consensus 199 ----------------------~~~~~-----------------------~~~~-~~~~~~~~~~~---~~~~~~~~~~~ 229 (400)
T PRK11646 199 ----------------------EGMTR-----------------------VLRD-KRFVTYVLTLT---GYYMLAVQVML 229 (400)
T ss_pred ----------------------HHHHH-----------------------HHcC-chHHHHHHHHH---HHHHHHHHHHH
Confidence 00000 0000 11111111111 11111111111
Q ss_pred eeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 039271 379 LFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATE 458 (609)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 458 (609)
.++.. .... ++.....+.+..+..+..........+..+ +|.. ....+..+.++.+++++.++..+
T Consensus 230 ~~p~~---~~~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~---~r~~-------~~~~~~~~~~~~~~~~~~l~~~~ 295 (400)
T PRK11646 230 MLPIM---VNDI-AGSPSAVKWMYAIEACLSLTLLYPIARWSE---KRFR-------LEHRLMAGLLIMSLSMFPIGMVS 295 (400)
T ss_pred hhhhh---HHhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHH---Hhcc-------hhHHHHHHHHHHHHHHHHHHHhh
Confidence 11110 0000 000111222333333333322222233221 2211 22345667777777766665432
Q ss_pred HhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039271 459 IQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGI 538 (609)
Q Consensus 459 ~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~ 538 (609)
+.++++...++.+++.+...|...+++.+.+|++.||+++|+.++...+|+.+|+.+.+++.+.
T Consensus 296 ----------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 296 ----------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 2334444556678888888889889999999999999999999999999999999999988765
Q ss_pred c
Q 039271 539 T 539 (609)
Q Consensus 539 ~ 539 (609)
+
T Consensus 360 ~ 360 (400)
T PRK11646 360 G 360 (400)
T ss_pred H
Confidence 3
No 18
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.93 E-value=1.2e-22 Score=223.53 Aligned_cols=168 Identities=17% Similarity=0.167 Sum_probs=129.8
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhh-hhH-----HHHHHHHHHHHHHhHHHHHhhhccchhHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENAN-AAN-----NVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAV 128 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~-~~~-----~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 128 (609)
++.+....+..+++.+.+.. ..+...++.++++.+... .++ +.++..++..++++++|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 34555566677777777665 445556788887644322 122 24667788999999999999996 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHH--------HHHHHHHHHHHhhcCchhhhhhhhhccCCCC
Q 039271 129 FQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAA--------IFYLSIYLIAFGYGGHQPTLATFGADQFDES 200 (609)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 200 (609)
+.+++.++.++++++ +++. .+++.|+++|++.|+..+...++++|++|++
T Consensus 93 ~~~l~~i~~~~~a~~----------------------~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~ 150 (490)
T PRK10642 93 TIVIMSISTFCIGLI----------------------PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR 150 (490)
T ss_pred HHHHHHHHHHHHHhc----------------------ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC
Confidence 999999999988887 3332 4889999999999999999999999999998
Q ss_pred ChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcc--------cccchhHHHHHHHHHHHH
Q 039271 201 KPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYE--------DSGKWTLGFLVSLASAVI 252 (609)
Q Consensus 201 ~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~--------~~~g~~~~f~~~~~~~~~ 252 (609)
+ |++..++...+.++|..+|+.+...+. ..+|||+.|++.++..++
T Consensus 151 ~------Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 151 K------RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred C------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 8 999999888888888887776554332 257999999987654443
No 19
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=2.1e-23 Score=223.01 Aligned_cols=174 Identities=18% Similarity=0.157 Sum_probs=152.6
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
.+|+.+.+++..++...+++.+.++++.|+++++|.+..++|++.+.+.++..++.++.|+++||+ |||+++..+.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHH
Confidence 456788888889999999999999999999999999999999999999999999999999999995 9999999999888
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+++.+. ++.+.+++.+.+.+.+.+...+...+...|.+|+++ |++.++
T Consensus 84 ~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g 135 (395)
T PRK10054 84 ASGFIAIPLV----------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFS 135 (395)
T ss_pred HHHHHHHHHH----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHH
Confidence 8887777666 567777778888887777778888999999999877 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
+.+...++|..++|.+++++.+ .+|+.+|++.+++.+++++..
T Consensus 136 ~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 136 LNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999998875 789999998887766665443
No 20
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=1e-22 Score=222.80 Aligned_cols=401 Identities=12% Similarity=0.055 Sum_probs=242.1
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
.|.++.+.+..++..+..+.+.+++|.|.+ ++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 345677778888888888888888887765 6999999999999999999999999999999996 99999999988888
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.+++.+. .+.+.++++|+++|++.+...|...+++.|.+|+++ |++.+++
T Consensus 87 ~~~~~~~~~----------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 138 (471)
T PRK10504 87 LGSLFCALS----------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMTF 138 (471)
T ss_pred HHHHHHHHh----------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence 877766665 567888999999999999999999999999999877 8899999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCC
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPA 294 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 294 (609)
++...++|..+||.+++++.+..||++.|++......++.+......++.+..++. .+.............. .
T Consensus 139 ~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~-~----- 211 (471)
T PRK10504 139 VTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRR-FDLSGFLLLAVGMATL-T----- 211 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-CChHHHHHHHHHHHHH-H-----
Confidence 99999999999999999999999999999998776666555544433332221111 1111111000000000 0
Q ss_pred CchhhhhhcCCcccccCccccccCchhhHHhhh------hcccccCCCCCCCCCcccchhhHHHHHHHHhHHH-HHHHHH
Q 039271 295 NSDELYEVAGPESAIKGSRKILHSNEIEFLDKA------ATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLP-IWLCTI 367 (609)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 367 (609)
+...+.+ . ..+............ ....+.....+..+++ +...+.+...+. .++...
T Consensus 212 -----~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~~~~~~~~l~~~~~~~~ 275 (471)
T PRK10504 212 -----LALDGSK---G--LGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLK------LFRTRTFSLGLAGSFAGRI 275 (471)
T ss_pred -----HHHhcCC---c--CCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH------HhcccchHHHHHHHHHHHH
Confidence 0000000 0 000000000000000 0000000000000111 111111111111 111111
Q ss_pred HHHHHHhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHH
Q 039271 368 IYSVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIG 447 (609)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~ 447 (609)
.+ .......+++.+...+.+ ....+.......+..++..++..++ .+|+++| ..+..+..+.
T Consensus 276 ~~-~~~~~~~~~~~~~~~g~~------~~~~g~~~~~~~~~~~~~~~~~~~l----~~r~g~~-------~~~~~~~~~~ 337 (471)
T PRK10504 276 GS-GMLPFMTPVFLQIGLGFS------PFHAGLMMIPMVLGSMGMKRIVVQV----VNRFGYR-------RVLVATTLGL 337 (471)
T ss_pred HH-HHHHHHHHHHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHcCch-------HHHHHHHHHH
Confidence 11 111111122211111111 1122233333333334444455554 4554332 2355566666
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHH
Q 039271 448 MLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYV 527 (609)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~i 527 (609)
+++...+.... ...+.+++....++.|++.+..++..+.++.+..|++.++.++|++++...+|+.+
T Consensus 338 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i 404 (471)
T PRK10504 338 ALVSLLFMLVA-------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSI 404 (471)
T ss_pred HHHHHHHHhcc-------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHH
Confidence 66555544421 11123333445667778888888888899999999999999999999999999999
Q ss_pred HHHHHHHhhhhc
Q 039271 528 SSLLVVMVMGIT 539 (609)
Q Consensus 528 g~~~~~~i~~~~ 539 (609)
|+.+.+.+.+..
T Consensus 405 g~~i~g~ll~~~ 416 (471)
T PRK10504 405 GVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHh
Confidence 999999887654
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=7.6e-23 Score=225.23 Aligned_cols=399 Identities=12% Similarity=0.009 Sum_probs=246.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
|..+..+++..++..+....+.+.+|.. .+++|.+..+.+|+.+.+.++..++.++.|+++||+ |||+++..+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 4456666677777777777666666655 668999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCC-CCChhhhhccchhHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFD-ESKPKERQSKTLFFC 213 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~ 213 (609)
+++++++.+ ++.+.++++|+++|+|.+...|.....+.+.++ +++ |+++++
T Consensus 83 ~~~~~~~~a----------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~~g 134 (495)
T PRK14995 83 LASLAAAFS----------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMALG 134 (495)
T ss_pred HHHHHHHHc----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHHHH
Confidence 999998887 678999999999999999998888888878774 455 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHH------HHHHHhh
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQV------FIAAARK 287 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 287 (609)
++....++|..+||.+++++.+..||||.|++...+.++.+++.....|+.++++.++.+....... +...+..
T Consensus 135 ~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~ 214 (495)
T PRK14995 135 VWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKT 214 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999987666655554444333322211111111111000 0001110
Q ss_pred cccccCCCchhhhhhcCCcccccCccccccCchhhHHhh-hhcccccCCCCCCCCCcccchhhHHHHHHHHhH-HHHHHH
Q 039271 288 WNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDK-AATITDNDLAGPKNPWKLCTVTQVEEAKCVLKM-LPIWLC 365 (609)
Q Consensus 288 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 365 (609)
. .....++ + ............. .-...+.+...+..|++.++ .+..... +..+..
T Consensus 215 ~-~~~~~~~-~---------------~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~------~~~~~~~~~~~~~~ 271 (495)
T PRK14995 215 A-LKGFLSL-W---------------VTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFT------HRIILSGVVMAMTA 271 (495)
T ss_pred c-cccCCch-H---------------HHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhC------CcccHHHHHHHHHH
Confidence 0 0000000 0 0000000000000 00000000000011111111 1111111 111111
Q ss_pred HHHHHHHHhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHH
Q 039271 366 TIIYSVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLI 445 (609)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~ 445 (609)
...++......+.++ +...+.+ ....+.......+...+..++.+++. +|+++| ..+..|++
T Consensus 272 ~~~~~~~~~~~~~~l-q~v~g~s------~~~ag~~~~~~~~~~~~~~~~~g~l~----~r~g~~-------~~~~~g~~ 333 (495)
T PRK14995 272 MITLVGFELLMAQEL-QFVHGLS------PLEAGMFMLPVMVASGFSGPIAGILV----SRLGLR-------LVATGGMA 333 (495)
T ss_pred HHHHHHHHHHHHHHH-HHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCch-------HHHHHHHH
Confidence 111111111111111 1111111 22234444455556666666666654 443322 23566777
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHH
Q 039271 446 IGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGN 525 (609)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~ 525 (609)
+.+++++.+.... ...+.+......++.|+|.+...++....+.+..|++.++.+++++++...+|+
T Consensus 334 ~~~~~~~~l~~~~-------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~ 400 (495)
T PRK14995 334 LSALSFYGLAMTD-------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGA 400 (495)
T ss_pred HHHHHHHHHHHhc-------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHH
Confidence 7777766554432 122344455567888999999999898999999999999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 039271 526 YVSSLLVVMVMG 537 (609)
Q Consensus 526 ~ig~~~~~~i~~ 537 (609)
.+|+.+.+.+.+
T Consensus 401 ~~G~ai~g~i~~ 412 (495)
T PRK14995 401 GLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
No 22
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.92 E-value=9.4e-23 Score=220.81 Aligned_cols=168 Identities=13% Similarity=0.058 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.++..++..++..+..+.+...++.+. +++|++..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHH
Confidence 344444555555555555556666554 56999999999999999999999999999999996 9999999999998888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
.+++... ++++.+.+.|++.|++.|...+...+++.|++|+++ |++.+++++
T Consensus 102 ~~~~~~~----------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~ 153 (434)
T PRK11663 102 NILFGFS----------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWN 153 (434)
T ss_pred HHHHHHH----------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHH
Confidence 8877776 668888899999999999888999999999999888 999999999
Q ss_pred HHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHH
Q 039271 217 FFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIAL 254 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 254 (609)
.+.++|+.++|.+++++.+.+|||+.|++.++..++..
T Consensus 154 ~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 154 TAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 99999999999999999988999999998776655443
No 23
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=7.2e-23 Score=222.85 Aligned_cols=144 Identities=16% Similarity=0.282 Sum_probs=123.9
Q ss_pred hhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHH
Q 039271 91 NANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAI 170 (609)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (609)
..+.+++.+++.++..++.+++|+++||+ |||++++.+.+++.++.++..... ...+.+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 129 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAA-------------------FALSVEM 129 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhc-------------------cccchHH
Confidence 89999999999999999999999999996 999999999999888888776541 1134568
Q ss_pred HHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhh---hhcccccchhHHHHHHH
Q 039271 171 FYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTIL---VYYEDSGKWTLGFLVSL 247 (609)
Q Consensus 171 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~---~~l~~~~g~~~~f~~~~ 247 (609)
++++|++.|++.+...+...++++|++|+++ |++.+++++.+.++|..+++.++ +.+.+..+||+.|++.+
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~ 203 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQL 203 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHH
Confidence 8999999999999999999999999999988 99999999999999999999999 77777789999999976
Q ss_pred HHHHHHHHHHHhc
Q 039271 248 ASAVIALLSYLMG 260 (609)
Q Consensus 248 ~~~~~~~~~~~~~ 260 (609)
+..++.++..++.
T Consensus 204 ~~~~~~~~~~~~l 216 (481)
T TIGR00879 204 IPAGLLFLGLFFL 216 (481)
T ss_pred HHHHHHHHHHhcC
Confidence 6655555444433
No 24
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=2.1e-22 Score=211.53 Aligned_cols=358 Identities=12% Similarity=-0.004 Sum_probs=231.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 039271 61 LLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLL 140 (609)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 140 (609)
++...++..++.......+|.|.. +++.+..+.+++.+++.++..++.++.|+++||+ ||||++..+.++..++..+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 445566666666666677777765 5899999999999999999999999999999996 99999999988887777766
Q ss_pred HHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHh
Q 039271 141 SVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLN 220 (609)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 220 (609)
....... ..+.+.++++|++.|++.+...+...+++.|++|+++ |++.+++.+...+
T Consensus 82 ~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 138 (365)
T TIGR00900 82 PFVALLG-----------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRS 138 (365)
T ss_pred HHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHH
Confidence 6651100 1268889999999999999999999999999999887 9999999999999
Q ss_pred hhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhh
Q 039271 221 VGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELY 300 (609)
Q Consensus 221 ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 300 (609)
+|..++|.+++++.+..||++.|++.++..+++.+..+..+.+..+++ +.++.+. +
T Consensus 139 ~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------------~----- 194 (365)
T TIGR00900 139 LFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS-EIQALSN------------------A----- 194 (365)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc-cccccch------------------h-----
Confidence 999999999999998899999999887766655544433322111100 0000000 0
Q ss_pred hhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHH-HHHHHHHHHHHhcccce
Q 039271 301 EVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPI-WLCTIIYSVVFTQMASL 379 (609)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 379 (609)
...+..+. ++ ...+.+.+...... +.....+........+.
T Consensus 195 ------------------~~~~~~~~---------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (365)
T TIGR00900 195 ------------------VLRDTREG---------------IK-----FVLKNPLLRTLLLLALLFNLVFAPAIVALFPY 236 (365)
T ss_pred ------------------HHHHHHhH---------------HH-----HHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 00000000 00 00000111111111 11111111111111111
Q ss_pred eeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 039271 380 FVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEI 459 (609)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 459 (609)
+..+..+.+ ....+.......+..++...+.+++ .+|.++ ...+..+..+.+++++...+..
T Consensus 237 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~- 298 (365)
T TIGR00900 237 VQSKYLGRG------STHYGWVLAAFGLGALLGALLLGLL----GRYFKR-------MALMTGAIFVIGLAILVVGLTP- 298 (365)
T ss_pred HHHHHhCCc------hHHHHHHHHHHHHHHHHHHHHHHHH----HHHhch-------hHHHHHHHHHHHHHHHHHHhhc-
Confidence 111100111 1112333334444444555555443 344322 2234555666666666555431
Q ss_pred hhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039271 460 QRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMG 537 (609)
Q Consensus 460 ~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~ 537 (609)
+ +.+..+...++.+++.....+...+++.+..|++.|+++.|+.++...++..+++.+.+.+.+
T Consensus 299 -------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 299 -------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred -------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 345566677888999988899999999999999999999999999999999999999987754
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=4.9e-22 Score=209.98 Aligned_cols=156 Identities=13% Similarity=0.048 Sum_probs=123.5
Q ss_pred HhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 039271 73 FGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTG 152 (609)
Q Consensus 73 ~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (609)
..+.+.+| .+.+++|++..+.|++.+.+.+++.+++++.|+++||+ |||+++..+.+....+.......
T Consensus 8 ~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~--------- 76 (368)
T TIGR00903 8 VTFSPVLS-LVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLDP--------- 76 (368)
T ss_pred HHHHhhHH-HHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHh---------
Confidence 33334444 56778999999999999999999999999999999996 99988765554444433212221
Q ss_pred CCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhh
Q 039271 153 CGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVY 232 (609)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~ 232 (609)
.+++.+++.|++.|++.+. .+.....++|++|+++ |++.+++.+.+.++|..+++.++++
T Consensus 77 -------------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~ 136 (368)
T TIGR00903 77 -------------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLK 136 (368)
T ss_pred -------------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999986 4555666799999877 9999999999999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 233 YEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 233 l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+.+.+|||+.|++.++..++..++++.
T Consensus 137 l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 137 IYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999877665555444433
No 26
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.91 E-value=2.8e-22 Score=214.82 Aligned_cols=378 Identities=15% Similarity=0.068 Sum_probs=238.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhh-----hhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENAN-----AANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQL 131 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 131 (609)
....+.+..++...++....++++.|++ ++|.+..+ .+++.+++.+...++.++.|+++||+ |||+++..+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHH
Confidence 4555666777788888888888998876 58887654 48889999999999999999999996 99999999988
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
+..++.+++... .+.+.+++.|++.|++.+ ..+...+++.|.+|+++ |++.
T Consensus 93 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~ 143 (408)
T PRK09874 93 GMGIVMVLMGLA----------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWA 143 (408)
T ss_pred HHHHHHHHHHHH----------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHH
Confidence 888877766665 568888999999998765 45777888999999887 8999
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccc
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVV 291 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (609)
.++++...++|..++|.+++.+.+..+|++.|++.++..++..+..+...++..+ +.+++....
T Consensus 144 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------------- 207 (408)
T PRK09874 144 LGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQ--PVSKKEMLH-------------- 207 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcc--cccchhhhH--------------
Confidence 9999999999999999999999888999999998887766555544332222110 000000000
Q ss_pred cCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHH-HHHHHHHH
Q 039271 292 VPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPI-WLCTIIYS 370 (609)
Q Consensus 292 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 370 (609)
..+..+.. +++ +........ +.......
T Consensus 208 ----------------------------~~~~~~~~-----------~~~------------~~~~~~~~~~~~~~~~~~ 236 (408)
T PRK09874 208 ----------------------------MREVVTSL-----------KNP------------KLVLSLFVTTLIIQVATG 236 (408)
T ss_pred ----------------------------HHHHHHhC-----------cCC------------chHHHHHHHHHHHHHHHH
Confidence 00000000 000 000000000 00000000
Q ss_pred HHHhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHH
Q 039271 371 VVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLA 450 (609)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~ 450 (609)
......+.+..... ..........+.+..+..+..++..+..+++ .+|++++ ..+..+..+..++
T Consensus 237 ~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l----~dr~g~~-------~~~~~~~~~~~~~ 301 (408)
T PRK09874 237 SIAPILTLYVRELA----GNVSNIAFISGMIASVPGVAALLSAPRLGKL----GDRIGPE-------KILITALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhccccc-------hhHHHHHHHHHHH
Confidence 00000111110000 0000000011222223334444444555554 4444332 2344555555555
Q ss_pred HHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHH
Q 039271 451 MIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSL 530 (609)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~ 530 (609)
++..... .+.+..+...++.|++.+...|...+.+.+..|++.+++..++++....+|..+|+.
T Consensus 302 ~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~ 365 (408)
T PRK09874 302 LIPMSFV----------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPL 365 (408)
T ss_pred HHHHHHh----------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHH
Confidence 5544432 133445556677888888888998889889999999999999999999999999999
Q ss_pred HHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhc
Q 039271 531 LVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICA 579 (609)
Q Consensus 531 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~ 579 (609)
+.+.+.+. .++...|++.+++.+++.+..+...
T Consensus 366 ~~G~l~~~----------------~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 366 MGAAISAN----------------YGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHhh----------------cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99877532 1244567777877777766655443
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.91 E-value=1.4e-21 Score=209.67 Aligned_cols=173 Identities=11% Similarity=0.027 Sum_probs=139.3
Q ss_pred hhHHHHHHHHHHHHH---HHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 56 KYASILLANQGLATL---AFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~---~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
+.++.++....+... +...+.+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||++..+.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~ 87 (406)
T PRK15402 10 QALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAF 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 334444444344333 33334444554 4578999999999999999999999999999999996 999999999988
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..++.+.+... .+.+.+++.|++.|++.+...+...+.+.|.+|+++ |.+..
T Consensus 88 ~~~~~~~~~~~----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~ 139 (406)
T PRK15402 88 FILTCLAILLA----------------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKIT 139 (406)
T ss_pred HHHHHHHHHHH----------------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHH
Confidence 88888777666 567888899999999999888888999999999887 78888
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
++.+....+|..++|.+++++.+..+|++.|++.++..++..+..+
T Consensus 140 ~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 140 ALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999998888999999987777666555443
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.91 E-value=6.3e-22 Score=211.54 Aligned_cols=367 Identities=13% Similarity=0.044 Sum_probs=233.2
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhh
Q 039271 67 LATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFL 146 (609)
Q Consensus 67 ~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 146 (609)
.....++...+.+| .+.+++|.|.++.+++.+.+.++..+++++.|+++||+ |||+++..+.+++.++.++++++
T Consensus 20 ~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a--- 94 (393)
T PRK09705 20 NMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY--- 94 (393)
T ss_pred HcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC---
Confidence 33333455555555 46778999999999999999999999999999999996 99999999999999999999887
Q ss_pred ccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHH
Q 039271 147 MIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFS 226 (609)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 226 (609)
++++.++++|++.|++.+...+....++.|++| ++ |++..+.+..+.++|..++
T Consensus 95 -------------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 95 -------------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLG 148 (393)
T ss_pred -------------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHH
Confidence 668889999999999999999998999999987 66 8899999999999999999
Q ss_pred hhhhhhccccc-chhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhhhcCC
Q 039271 227 NTILVYYEDSG-KWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYEVAGP 305 (609)
Q Consensus 227 ~~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~ 305 (609)
+.+++++.++. +||+.+.+.++..++.+...+...++ +|++++ ++
T Consensus 149 ~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------------~~--------- 194 (393)
T PRK09705 149 AAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAR----EVASSH---------------------KT--------- 194 (393)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCcccc---------------------CC---------
Confidence 99999888764 89988766554443333322222111 111000 00
Q ss_pred cccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccceeeEecc
Q 039271 306 ESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASLFVEQGD 385 (609)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
+ . .+.+. .++.+.....+...+....++....+.+.++.. .
T Consensus 195 ----~------~----------------------~~~~~-----l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--~ 235 (393)
T PRK09705 195 ----T------T----------------------TPVRV-----VFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE--I 235 (393)
T ss_pred ----C------c----------------------CCccc-----ccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c
Confidence 0 0 00000 000011111111112222222333333333322 1
Q ss_pred cccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 039271 386 VMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYI 465 (609)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 465 (609)
+.+ ....+.......+..++...+.+++ .+|.+++ ..+.+++.+..+++..+....
T Consensus 236 g~s------~~~ag~~~~~~~i~~i~g~~~~g~l----~~r~~~~-------~~~~~~~~l~~~~~~~~~~~~------- 291 (393)
T PRK09705 236 GAS------AQYSGSLLALMTLGQAAGALLMPAM----ARHQDRR-------KLLMLALVLQLVGFCGFIWLP------- 291 (393)
T ss_pred CCC------hhhhhHHHHHHHHHHHHHHHHHHHH----Hhhccch-------HHHHHHHHHHHHHHHHHHHcc-------
Confidence 111 1122334444455555555555554 4443322 234556666666655444321
Q ss_pred CCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 039271 466 SPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAP-DGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDK 544 (609)
Q Consensus 466 ~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~ 544 (609)
. +..... .++.+++.+...|.......+..+ ++.+++..++.+....+++.+++.+.+++.+.+
T Consensus 292 -------~-~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~----- 356 (393)
T PRK09705 292 -------L-QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS----- 356 (393)
T ss_pred -------c-hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 1 111111 234566666667776666667764 678999999999999999999999999887643
Q ss_pred CCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhcccccccc
Q 039271 545 PGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKGIN 586 (609)
Q Consensus 545 ~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~ 586 (609)
+.+...|.+.++++++..+..+.+.++++.+.
T Consensus 357 ----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 357 ----------GNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 12233566667777777777677777655543
No 29
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=7.7e-22 Score=212.17 Aligned_cols=178 Identities=13% Similarity=0.075 Sum_probs=150.0
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 039271 52 KGGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQL 131 (609)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 131 (609)
|.+|+.+..+++..+++......+... ...+++++|.+..+.+++.+++.+++.+++++.|+++||+ |||+++..+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFA-GLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHH-HHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHH
Confidence 345666666666666666665555444 4578999999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
++.++.++.+++ ++.+.+++.|++.|++.+...|....+++|++|+++ |++.
T Consensus 82 ~~~~~~~~~~~~----------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~ 133 (412)
T TIGR02332 82 LWGIASTATMFA----------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARA 133 (412)
T ss_pred HHHHHHHHHHHh----------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHH
Confidence 999999888887 668889999999999999999999999999999888 9999
Q ss_pred HHHHHHHHhhhHHHHhhhhhhccc------ccchhHHHHHHHHHHHHHHHHHHh
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYED------SGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~------~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.++++.+.++|..+++.+++++.+ ..|||+.|++.++..++..++.++
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988753 469999999987766554444433
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=6.3e-22 Score=216.71 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=134.7
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
+++.++......++..+..+...+.++ ++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 344555555555556665555555444 66788999999999999999999999999999999996 9999999998888
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.++.+++ .+.+.+++.|++.|++.+... .....++|++|+++ |+++++
T Consensus 112 ~~~~~~~~~~----------------------~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a~g 162 (476)
T PLN00028 112 APAVFCMSLV----------------------SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTANG 162 (476)
T ss_pred HHHHHHHHHh----------------------cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHHHH
Confidence 8887777766 567788889999999888654 34567899999988 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhccc---------ccchhHHHHHHHHHHHHHHHHHHh
Q 039271 214 YFYFFLNVGSLFSNTILVYYED---------SGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~---------~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+.+...++|+.+++.+.+.+.. ..|||+.|++.+++.++..+..+.
T Consensus 163 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 163 IAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9888888888877666654421 258999999988776655444433
No 31
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=1.7e-21 Score=210.89 Aligned_cols=175 Identities=15% Similarity=0.181 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhC---CchhhhhH---HHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQ---QENANAAN---NVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQ 130 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g---~~~~~~~~---~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 130 (609)
.+....+..+++.+.+.. .++...++.++++ .+..+.+. +.+...++..++.+++|+++||+ ||||++..+.
T Consensus 23 ~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~ 100 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHH
Confidence 344444556667766665 5666678888874 44554333 34444555559999999999996 9999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccch
Q 039271 131 LIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTL 210 (609)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 210 (609)
+++.++.++++++ |++.+ ........+.+.|+++|++.|+..|...++++|++|+++ |++
T Consensus 101 ~~~~~~~~~~~~~--~~~~~------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~ 160 (432)
T PRK10406 101 CMMCFGSLVIACL--PGYET------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGF 160 (432)
T ss_pred HHHHHHHHHHhhc--CCchh------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccH
Confidence 9999999888776 21000 000224578899999999999999999999999999988 999
Q ss_pred hHHHHHHHHhhhHHHHhhhhhhcc--------cccchhHHHHHHHHHHHHH
Q 039271 211 FFCYFYFFLNVGSLFSNTILVYYE--------DSGKWTLGFLVSLASAVIA 253 (609)
Q Consensus 211 ~~~~~~~~~~ig~~~~~~i~~~l~--------~~~g~~~~f~~~~~~~~~~ 253 (609)
..++.+.+.+.|..+++.+...+. +.+|||++|++.++..++.
T Consensus 161 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 161 YASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 999888888888888876654433 2579999999877655443
No 32
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=1.7e-22 Score=219.97 Aligned_cols=153 Identities=16% Similarity=0.091 Sum_probs=127.2
Q ss_pred HHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 039271 77 VNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDG 156 (609)
Q Consensus 77 ~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (609)
.+++ .+.+++|.+.++++++.+.+.+...++.+++|+++||+ |||++++.+.++..++.++++++
T Consensus 40 ~~~~-~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~------------- 104 (455)
T TIGR00892 40 VFFK-ELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFS------------- 104 (455)
T ss_pred hhHH-HHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHh-------------
Confidence 3444 45678999999999999999999999999999999995 99999999998888888877776
Q ss_pred CCccCCCcchhHHHHHH-HHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc
Q 039271 157 FISCKPLSSIFAAIFYL-SIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 157 ~~~~~~~~~~~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~ 235 (609)
.+.+.+++ .|++.|++.+...+...+++.++++ ++ |++..++.+.+.++|..++|.+++++.+
T Consensus 105 ---------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 105 ---------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred ---------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 45566554 4688899988766667788889885 55 8999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhc
Q 039271 236 SGKWTLGFLVSLASAVIALLSYLMG 260 (609)
Q Consensus 236 ~~g~~~~f~~~~~~~~~~~~~~~~~ 260 (609)
.+|||+.|++.+++.+++.+..++.
T Consensus 169 ~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 169 SFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999887766655544433
No 33
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=4.4e-22 Score=210.80 Aligned_cols=154 Identities=18% Similarity=0.161 Sum_probs=137.0
Q ss_pred HHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 039271 77 VNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDG 156 (609)
Q Consensus 77 ~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (609)
....+++.+++|.+..+.+++.+++.++..++.++.|+++||+ |||+++..+.++..++.+++++.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~------------- 79 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA------------- 79 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH-------------
Confidence 3444567889999999999999999999999999999999996 99999999999888888888777
Q ss_pred CCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccc
Q 039271 157 FISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDS 236 (609)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~ 236 (609)
.+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++++.+.
T Consensus 80 ---------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 144 (399)
T TIGR00893 80 ---------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIH 144 (399)
T ss_pred ---------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHh
Confidence 568899999999999999999999999999999887 99999999999999999999999999888
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh
Q 039271 237 GKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 237 ~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.+|++.|++.++..++..+..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 145 FSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred CCchHHHHHHHHHHHHHHHHhhh
Confidence 99999999887766655554433
No 34
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=1e-21 Score=212.04 Aligned_cols=165 Identities=13% Similarity=0.176 Sum_probs=143.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
++.+....+..+...+..+.. .+...++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~ 94 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 445555556666666666554 3444567789999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.+...++ .+.+.++++|++.|++.+...+....++.|.+|+++ |++..++
T Consensus 95 ~~~~~~~~~----------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~ 146 (426)
T PRK12307 95 VGTGLSGLA----------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAF 146 (426)
T ss_pred HHHHHHHHH----------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhH
Confidence 988888777 678899999999999999999999999999999988 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHH
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLAS 249 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~ 249 (609)
+..+.++|.++++.+.+.+.+..+|++.|++.++.
T Consensus 147 ~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 147 LVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 99999999999999999998889999999876543
No 35
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=8.4e-22 Score=214.52 Aligned_cols=153 Identities=10% Similarity=0.080 Sum_probs=122.9
Q ss_pred HHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 039271 78 NLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGF 157 (609)
Q Consensus 78 ~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (609)
+..+|+.++ |++..+.+++.+.+.++..++++++|+++||+ |||++++.+.++.+++.+++.+. +.
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~--~~---------- 115 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFV--PW---------- 115 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhh--hc----------
Confidence 344577777 99999999999999999999999999999995 99999999998888888777665 11
Q ss_pred CccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHH-HHhhhhhhcccc
Q 039271 158 ISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSL-FSNTILVYYEDS 236 (609)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~-~~~~i~~~l~~~ 236 (609)
...+.+.+++.|++.|++.+...|.....+.|++|+++ |++++++++.+.++|+. .+|+++..+...
T Consensus 116 ------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 116 ------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred ------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 01356778888999999999988888888999999888 99999999999999874 456544333334
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 039271 237 GKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 237 ~g~~~~f~~~~~~~~~~~~~ 256 (609)
.|||+.|++.++..++..++
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALF 203 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 58999999887665554433
No 36
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=8e-22 Score=216.34 Aligned_cols=398 Identities=13% Similarity=0.109 Sum_probs=242.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
+..+++..+...+........+| ++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.+++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIP-TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 44455555666666555545555 55678999999999999999999999999999999996 99999999999999888
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
+++... ++.+.++++|+++|++.+...+...+++.|.+|+++ |+++.++++.
T Consensus 82 ~~~~~~----------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~ 133 (485)
T TIGR00711 82 LLCGVA----------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGL 133 (485)
T ss_pred HHHhCc----------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHH
Confidence 877766 668889999999999999999999999999999887 9999999999
Q ss_pred HHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHH-HhhcccccCCCc
Q 039271 218 FLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAA-ARKWNVVVPANS 296 (609)
Q Consensus 218 ~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~ 296 (609)
..++|..++|.+++++.+.+||++.|++.+...++..++.....++.++++. ++.+.....+... .....
T Consensus 134 ~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~g~~l~~~~~~~~~------- 204 (485)
T TIGR00711 134 TVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAAS--ENFDFLGLLLLSVGLGSLL------- 204 (485)
T ss_pred HHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccccc--CCCcHHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999999998876666555544433332211111 1111111100000 00000
Q ss_pred hhhhhhcCCcccccCccccccCchhhHHh--h----h-hcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHH
Q 039271 297 DELYEVAGPESAIKGSRKILHSNEIEFLD--K----A-ATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIY 369 (609)
Q Consensus 297 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (609)
+...+.++ ..+.......... . . -...+.+...+..+++.+ ++.+.....+..++....+
T Consensus 205 ---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 271 (485)
T TIGR00711 205 ---YGLSEGPE-----RGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLF-----KYRNFTIGCVYMSLLGLGL 271 (485)
T ss_pred ---HHHhhCCC-----CCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHH-----cCCChHHHHHHHHHHHHHH
Confidence 00000000 0000000000000 0 0 000000000000111100 0001111111112222222
Q ss_pred HHHHhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHH
Q 039271 370 SVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGML 449 (609)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~ 449 (609)
+......+.++.. ..+.+ ....+.......+..++..++.+++. +|.+ ++..+.++.++.++
T Consensus 272 ~~~~~~~p~~~~~-~~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l~----~r~~-------~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 272 YGSFYLLPLYLQQ-VLGYT------ALQAGLHILPVGLAPMLSSPIAGRMG----DKID-------PRKLVTIGLILYAV 333 (485)
T ss_pred HHHHHHHHHHHHH-hcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHH----hhcC-------cHHHHHHHHHHHHH
Confidence 2222212222111 11111 11233444455555666666666553 3432 22346677777777
Q ss_pred HHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHH
Q 039271 450 AMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSS 529 (609)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~ 529 (609)
+++.+.+.. ....+.+..+...++.|++.+...++....+.+..|++.+++++|+.++.+.+|+.+|+
T Consensus 334 ~~~~~~~~~------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 401 (485)
T TIGR00711 334 GFYWRAFTF------------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGT 401 (485)
T ss_pred HHHHHhccC------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 776665211 12334455566678889999888888878888899999999999999999999999999
Q ss_pred HHHHHhhh
Q 039271 530 LLVVMVMG 537 (609)
Q Consensus 530 ~~~~~i~~ 537 (609)
.+.+.+.+
T Consensus 402 ~i~g~~~~ 409 (485)
T TIGR00711 402 ALITTILT 409 (485)
T ss_pred HHHHHHHH
Confidence 99987764
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=3.6e-21 Score=205.72 Aligned_cols=173 Identities=10% Similarity=0.100 Sum_probs=148.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 53 GGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
..|+.+..+....++.....|...+.++.+ .+++|.+..+.++..+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~~ 94 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAVL 94 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHH
Confidence 356666666666555555666666666654 568999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..++.+++.+. .+++.+++.|++.|++.+...+...+++.|++|+++ |+++.
T Consensus 95 ~~~~~~~~~~~----------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~ 146 (394)
T PRK10213 95 LTLSCLLVSFA----------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKAL 146 (394)
T ss_pred HHHHHHHHHHH----------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHH
Confidence 99888877776 678999999999999999999999999999999888 99999
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHH
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALL 255 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 255 (609)
++.....++|..++|.+++++.+.+|||+.|++.++..++..+
T Consensus 147 ~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 147 SVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988765554443
No 38
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=4.2e-21 Score=208.16 Aligned_cols=176 Identities=16% Similarity=0.155 Sum_probs=130.1
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh--CCchhhhhHHH-----HHHHHHHHHHHhHHHHHhhhccchhHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVL--QQENANAANNV-----SKWTGTVYMCSLIGAFLSDSYWGRYLTCA 127 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~--g~~~~~~~~~~-----~~~~~~~~~~~~~~G~laDr~~Grr~~~~ 127 (609)
+|.+...++..+++.+.+..+....+.++.+++ +.++. .+++. ++..++..++.++.|+++||+ |||+++.
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l~ 98 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHHH
Confidence 455666667777887777765555555666655 56655 34443 234555678888899999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhc
Q 039271 128 VFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQS 207 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (609)
.+.+++.++.++++++ |+..+ ..-.....+++.|+++|++.|+..+....++.|++|+++
T Consensus 99 ~~~~~~~~~~~~~~~~--~~~~~------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------ 158 (438)
T PRK09952 99 LTVWMMGIATALIGLL--PSFST------------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------ 158 (438)
T ss_pred HHHHHHHHHHHHHhcC--CcHHH------------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------
Confidence 9999999998888876 11000 000012358889999999999999999999999999988
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhhhcc--------cccchhHHHHHHHHHHHH
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILVYYE--------DSGKWTLGFLVSLASAVI 252 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~~l~--------~~~g~~~~f~~~~~~~~~ 252 (609)
|+...+....+..+|..+++.+..++. +.+|||++|++.++..++
T Consensus 159 rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 159 KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 988888888888888888876665543 357999999987765433
No 39
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=3.3e-22 Score=220.83 Aligned_cols=147 Identities=16% Similarity=0.193 Sum_probs=128.8
Q ss_pred HHHHhhCCc---hhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 039271 82 FLTRVLQQE---NANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFI 158 (609)
Q Consensus 82 yl~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (609)
.+.++++++ ..+.++..+++.++..++.++.|+++||+ |||++++++.++..++.++.+++
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~--------------- 177 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS--------------- 177 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc---------------
Confidence 356788998 89999999999999999999999999995 99999999999888888877776
Q ss_pred ccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccc
Q 039271 159 SCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGK 238 (609)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g 238 (609)
.+++.+++.|++.|++.+...+...+++.|.+|+++ |+...+++..+..+|.+++|.++..+.+
T Consensus 178 -------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~--- 241 (505)
T TIGR00898 178 -------PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD--- 241 (505)
T ss_pred -------ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---
Confidence 678899999999999999999999999999999988 9999999988999999999988776654
Q ss_pred hhHHHHHHHHHHHHHHHHHHhc
Q 039271 239 WTLGFLVSLASAVIALLSYLMG 260 (609)
Q Consensus 239 ~~~~f~~~~~~~~~~~~~~~~~ 260 (609)
||+.|++.++..++..+..++.
T Consensus 242 wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 242 WRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998887766665555443
No 40
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=2.3e-22 Score=210.28 Aligned_cols=350 Identities=16% Similarity=0.175 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 039271 62 LANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLS 141 (609)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 141 (609)
++..++..+......+.++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.++..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4455666666666667777688889999999999999999999999999999999995 999999999999988855555
Q ss_pred HHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhh
Q 039271 142 VLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNV 221 (609)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 221 (609)
++ .+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...++
T Consensus 81 ~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~ 132 (352)
T PF07690_consen 81 FA----------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSL 132 (352)
T ss_dssp HH----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHH
T ss_pred hh----------------------hhHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhh
Confidence 54 345589999999999999999999999999999988 99999999999999
Q ss_pred hHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhh
Q 039271 222 GSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYE 301 (609)
Q Consensus 222 g~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 301 (609)
|..++|.+++++.+..+|++.|++.++..++..++.....++.+.+++..++.++ +
T Consensus 133 g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~--------------------~---- 188 (352)
T PF07690_consen 133 GSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKES--------------------E---- 188 (352)
T ss_dssp HHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTT--------------------T----
T ss_pred hhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccccccccc--------------------c----
Confidence 9999999999999889999999999888877766433332221111110000000 0
Q ss_pred hcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHH-HHHHHHHHHhccccee
Q 039271 302 VAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWL-CTIIYSVVFTQMASLF 380 (609)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 380 (609)
.+. ..++.. ..+...+.+.++..+..++ ....+.......+.++
T Consensus 189 ---------------~~~-------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (352)
T PF07690_consen 189 ---------------SKK-------------------PKPLKP-GFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYL 233 (352)
T ss_dssp -----------------H-------------------HHCCCH--CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------ccc-------------------cccccc-ccccccccchhhhhhhhhhHHHHHHHHhhcccchhh
Confidence 000 000100 0001112222211111111 1112222222222211
Q ss_pred eEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 039271 381 VEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQ 460 (609)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 460 (609)
.+..+.+ . ....+....+..+..++...+.+++.+++.+| ....+......+..+.+....
T Consensus 234 -~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-- 294 (352)
T PF07690_consen 234 -QEVLGFS-G----PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----------RRLLIAILLLILGALGLLLLP-- 294 (352)
T ss_dssp -CHHHHCC-T----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHHCCSH--
T ss_pred -hhccCCC-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHHHHHHHHHHHHHHHHHHHH--
Confidence 1111111 0 01122334444445555555666554333222 123333333333333332221
Q ss_pred hhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHH
Q 039271 461 RLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSS 529 (609)
Q Consensus 461 ~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~ 529 (609)
...+..+.+...++.|++.+...+...+++.+.+|++.+|++.|+.++..++++.+||
T Consensus 295 -----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 295 -----------FSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp -----------HHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 1124456666778899999999999999999999999999999999999999998886
No 41
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.91 E-value=2.9e-22 Score=219.14 Aligned_cols=155 Identities=9% Similarity=-0.035 Sum_probs=127.2
Q ss_pred HHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCc
Q 039271 80 VLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFIS 159 (609)
Q Consensus 80 ~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (609)
...+.+++|.+..+.|++.+.+.+++.++.+++|+++||+ |||+++..+.++..++.++.+.....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~------------- 117 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS------------- 117 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 3456789999999999999999999999999999999996 99999999888777666655542100
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccccc--
Q 039271 160 CKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSG-- 237 (609)
Q Consensus 160 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~-- 237 (609)
...+++.+++.|++.|++.+...|...++++|++|+++ |++.++++..+.++|..+++.+..++.+..
T Consensus 118 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~ 187 (467)
T PRK09556 118 ----GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFFD 187 (467)
T ss_pred ----ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhcc
Confidence 01568899999999999999999999999999999998 999999999999999999998887765542
Q ss_pred -chhHHHHHHHHHHHHHHHHHH
Q 039271 238 -KWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 238 -g~~~~f~~~~~~~~~~~~~~~ 258 (609)
+|+..|.+.++..++..++.+
T Consensus 188 ~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 188 GHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred CcchhHHHHHHHHHHHHHHHHH
Confidence 588888887665554433333
No 42
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.7e-22 Score=206.19 Aligned_cols=174 Identities=14% Similarity=0.106 Sum_probs=153.8
Q ss_pred hHHHHHHHHHHHHHHHHhhH---HHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVG---VNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~---~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
--+-+++..++...+||... ....+++.++.++|.+|.|.+.+.+.+.+.++-.+.|.++||. +.|..+..++++.
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLils 104 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHH
Confidence 33556667777777888655 4456788888999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.+..+++.++ .+.+.+.+..++.|...|.-.|++..+++.+|++++ ||+..+
T Consensus 105 ai~nil~Gfs----------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~s 156 (448)
T COG2271 105 AIVNILFGFS----------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWS 156 (448)
T ss_pred HHHHHHHhhh----------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEE
Confidence 9999999988 678899999999999999999999999999999999 999999
Q ss_pred HHHHHHhhhHHHHhhhh--hhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 214 YFYFFLNVGSLFSNTIL--VYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~--~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+.+.+.|+|+.+.|.+. +++..+.+||..|+++++++++..++.+.
T Consensus 157 iWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~ 204 (448)
T COG2271 157 IWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLF 204 (448)
T ss_pred EehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 89988889999999999776655444433
No 43
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=7.8e-22 Score=207.98 Aligned_cols=155 Identities=14% Similarity=0.110 Sum_probs=132.0
Q ss_pred HHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 039271 72 FFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPT 151 (609)
Q Consensus 72 ~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (609)
.|.... +.+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+++++.
T Consensus 19 ~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~-------- 88 (377)
T TIGR00890 19 VYTWTL-LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA-------- 88 (377)
T ss_pred Hhhhhh-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH--------
Confidence 454434 45677889999999999999999999999999999999995 99999999999999999888887
Q ss_pred CCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhh
Q 039271 152 GCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILV 231 (609)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~ 231 (609)
++.+.++++|++.|++.+...+.....+.+++| ++ |++..+++..+.++|..+++.+.+
T Consensus 89 --------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~ 147 (377)
T TIGR00890 89 --------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLIT 147 (377)
T ss_pred --------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHHH
Confidence 678899999999999999888888888888886 45 889999999999999888766777
Q ss_pred hcccccchhHHHHHHHHHHHHHHHHH
Q 039271 232 YYEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 232 ~l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
.+.+..|||+.|++.++..++..+..
T Consensus 148 ~~~~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 148 SVINLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 77777899999998887666555443
No 44
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=4.4e-21 Score=202.95 Aligned_cols=169 Identities=14% Similarity=0.029 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHH-HHHHHHHHHHHH
Q 039271 62 LANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAV-FQLIFVVGLVLL 140 (609)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~~~~~~~ 140 (609)
++..++..++.....+.++.|+.+++|.+..+.+++.+.+.+...+..++.|+++||+ ||||.++. +.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3456777778888889999999999999999999999999999999999999999996 99887655 444444555555
Q ss_pred HHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccch--hHHHHHHH
Q 039271 141 SVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTL--FFCYFYFF 218 (609)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~ 218 (609)
..+ ++++.+++.|++.+.+.+...|...++..|..|++. |.. ..+..+..
T Consensus 82 ~~~----------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 133 (375)
T TIGR00899 82 AWN----------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQ 133 (375)
T ss_pred Hhc----------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHH
Confidence 554 557778888888887777778888888888876554 443 35777788
Q ss_pred HhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 219 LNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.++|..++|.+++++.+..|||+.|++.++..++..+..+.
T Consensus 134 ~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 134 ISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998899999999988776655554443
No 45
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=5.4e-21 Score=203.53 Aligned_cols=173 Identities=17% Similarity=0.102 Sum_probs=149.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+.++.+.+..+......+...+.++. +.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 45666777777777777777777765 5678999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+.+++.+. ++++.+++.|++.|++.+...+....++.|++|+++ |++.++++
T Consensus 81 ~~~l~~~~----------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 132 (382)
T PRK10091 81 GNAMFTLS----------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGM 132 (382)
T ss_pred HHHHHHHh----------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHH
Confidence 88888777 678999999999999999888888889999998877 88899999
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
..+.++|..++|.+++++.+..|||+.|++.++..++..+..+
T Consensus 133 ~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 133 VSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred HHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999889999999998876655544433
No 46
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=2.9e-21 Score=206.09 Aligned_cols=174 Identities=17% Similarity=0.235 Sum_probs=149.7
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 039271 52 KGGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQL 131 (609)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 131 (609)
+.+|+.+..+.+..+...+..+......+ .+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 34577777777788888887776655555 56788999999999999999999999999999999996 99999999998
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
+..++.+++.+. ++++.+++.|++.|++.+...+...+++.|.+|+++ |++.
T Consensus 86 ~~~~~~~~~~~~----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~ 137 (405)
T TIGR00891 86 LFSAGTLACGFA----------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNKA 137 (405)
T ss_pred HHHHHHHHHHHh----------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhHH
Confidence 888888877776 568889999999999999999999999999999988 9999
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccc--hhHHHHHHHHHHHHHHH
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGK--WTLGFLVSLASAVIALL 255 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g--~~~~f~~~~~~~~~~~~ 255 (609)
.++.+.+.++|..+++.+++.+.+..+ |++.|++.++..++.++
T Consensus 138 ~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 138 SGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALW 183 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998887665 99999886655544443
No 47
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=1.9e-20 Score=198.65 Aligned_cols=175 Identities=13% Similarity=0.065 Sum_probs=146.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
++.++.+.+..+...++.....+.+| ++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 34444455555555555555555555 45678999999999999999999999999999999996 99999999999888
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.+++... ++.+.+.+.|++.|++.+...+...+++.|.+|+++ |++.+++
T Consensus 82 ~~~~~~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 133 (385)
T TIGR00710 82 LSSLGLALS----------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSI 133 (385)
T ss_pred HHHHHHHHH----------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHH
Confidence 888877776 567889999999999999999999999999999887 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.+...++|..++|.+++++.+..+|++.|++.++..++..+..+.
T Consensus 134 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 134 LMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998899999999887766655554443
No 48
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.90 E-value=1.6e-20 Score=201.88 Aligned_cols=153 Identities=14% Similarity=0.106 Sum_probs=133.1
Q ss_pred HHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 039271 77 VNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDG 156 (609)
Q Consensus 77 ~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (609)
+.+|. +.++++.+..+.++.++++.++..++++++|+++||+ |||+++..+.+++.++.+++...
T Consensus 37 p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a------------- 101 (413)
T PRK15403 37 PGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT------------- 101 (413)
T ss_pred cCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc-------------
Confidence 33443 5678999999999999999999999999999999995 99999999999988888887776
Q ss_pred CCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccc
Q 039271 157 FISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDS 236 (609)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~ 236 (609)
++.+.++++|+++|++.+...+...+++.|.+|+++ |++.+++++...++|..+||.+++++.+.
T Consensus 102 ---------~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~ 166 (413)
T PRK15403 102 ---------TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHF 166 (413)
T ss_pred ---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 668889999999999988777777888999999887 88889999999999999999999999888
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh
Q 039271 237 GKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 237 ~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.|||+.|++.++..+++.+..+.
T Consensus 167 ~gw~~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 167 VHWKVLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999988776666554433
No 49
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=8.4e-21 Score=197.75 Aligned_cols=346 Identities=19% Similarity=0.212 Sum_probs=252.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 039271 60 ILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVL 139 (609)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 139 (609)
.+....+...+.++...+..+.|.+ ++|.+..+.+++.+...+...++.++.|+++||+ |||+.+..+.++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 4556667777777777788887764 6799999999999999999999999999999996 9999999999998888888
Q ss_pred HHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHH
Q 039271 140 LSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFL 219 (609)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 219 (609)
+... ++.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...
T Consensus 81 ~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 132 (352)
T cd06174 81 LAFA----------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGF 132 (352)
T ss_pred HHHh----------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHH
Confidence 7776 568889999999999999999999999999999988 999999999999
Q ss_pred hhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhh
Q 039271 220 NVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDEL 299 (609)
Q Consensus 220 ~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 299 (609)
++|..++|.+++.+.+..+|++.|++.++..++..+.....+ +..
T Consensus 133 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~---------------------- 177 (352)
T cd06174 133 GLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------RLL---------------------- 177 (352)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------HHH----------------------
Confidence 999999999999999988999999988877666655443321 000
Q ss_pred hhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccce
Q 039271 300 YEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASL 379 (609)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (609)
.. ..+..+.............+.+
T Consensus 178 ------------------------------------------------------~~--~~~~~~~~~~~~~~~~~~~~~~ 201 (352)
T cd06174 178 ------------------------------------------------------LL--LALAFFLLSFGYYGLLTYLPLY 201 (352)
T ss_pred ------------------------------------------------------HH--HHHHHHHHHhHHHHHHHHHHHH
Confidence 00 0000011111111111111111
Q ss_pred eeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhH-HHHHHHHHHHHHHHHHHHHH
Q 039271 380 FVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQ-RMGIGLIIGMLAMIAAGATE 458 (609)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ 458 (609)
... ..+.+ ....+.......+...+...+..++.++..+| . .+..+.++..++++.+...+
T Consensus 202 ~~~-~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 202 LQE-VLGLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----------RLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHH-hcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHHHHhc
Confidence 110 00111 12234455555666666666666654433333 2 46677777777777776532
Q ss_pred HhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039271 459 IQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGI 538 (609)
Q Consensus 459 ~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~ 538 (609)
+.+..+...++.+++.....+...+++.+..|++.|++.+|+.+..+.+++.+++.+.+.+.+.
T Consensus 264 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~ 327 (352)
T cd06174 264 ----------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT 327 (352)
T ss_pred ----------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3566677788899999999999999999999999999999999999999999999999877531
Q ss_pred cccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHh
Q 039271 539 TAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYL 576 (609)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~ 576 (609)
.++...+++.+++.+++.++.+
T Consensus 328 ----------------~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 328 ----------------GGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred ----------------cCcchHHHHHHHHHHHHHHHhe
Confidence 1223456777777776666543
No 50
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=4.5e-21 Score=211.99 Aligned_cols=404 Identities=14% Similarity=0.154 Sum_probs=234.4
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHH
Q 039271 93 NAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFY 172 (609)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (609)
+.+++.+...++..++.+++|+++|++ |||++++++.+++.+|.++++++ .+...+.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a----------------------~~~~~l~ 146 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA----------------------PSWYQLI 146 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh----------------------hhHHHHH
Confidence 448999999999999999999999996 99999999999999999999998 7899999
Q ss_pred HHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccc-cchhHHHHHHHHHHH
Q 039271 173 LSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDS-GKWTLGFLVSLASAV 251 (609)
Q Consensus 173 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~-~g~~~~f~~~~~~~~ 251 (609)
++|++.|+|.|+.....+.+++|..|++. ||...+..+...++|..++.+++....+. ++||..+.+..+..+
T Consensus 147 ~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~ 220 (513)
T KOG0254|consen 147 VGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAV 220 (513)
T ss_pred HHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 99999999999999999995444443332 489988888777666
Q ss_pred HHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhhhcCCcccccCcccccc---CchhhHHhhhh
Q 039271 252 IALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILH---SNEIEFLDKAA 328 (609)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 328 (609)
+..+..+. .||+|+++.++++.+++++...++.. .+.....+...
T Consensus 221 ~~~~~~~~--------------------------------~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~ 268 (513)
T KOG0254|consen 221 ILALGMLF--------------------------------LPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLK 268 (513)
T ss_pred HHHHHHHh--------------------------------CCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 65555333 33444444444444333333332222 11111111100
Q ss_pred --cccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccceeeEecccccccccccccCcccccchhH
Q 039271 329 --TITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDI 406 (609)
Q Consensus 329 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (609)
...+.........|+.+.. ....++......+..++.+.......+++....+..+.... . .........++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~--~-~~~~~~~~~v~~ 343 (513)
T KOG0254|consen 269 IKLLVEAEVAEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSD--T-FLASIILGVVNF 343 (513)
T ss_pred HHHHHhhhcccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCc--h-HHHHHHHHHHHH
Confidence 0000000000001111111 01222222222222222221111111111111111111111 0 111122223333
Q ss_pred HHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHH
Q 039271 407 CSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLV 486 (609)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~ 486 (609)
+..++...+ +|+++|| ..+..|.+.+.+++++++.......+.... .....+..+...++..
T Consensus 344 ~~t~~~~~l----vd~~gRr-----------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v 405 (513)
T KOG0254|consen 344 LGTLVATYL----VDRFGRR-----------KLLLFGAAGMSICLVILAVVGVFALYYPNS---SKGAGWLAIVFLCLFI 405 (513)
T ss_pred HHHHHHHHH----HHHhccH-----------HHHHHhHHHHHHHHHHHHHHHHHhccCCCc---ccchhHHHHHHHHHHH
Confidence 333333333 3333444 357778888888877776654321000000 0111222222222233
Q ss_pred HHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHH
Q 039271 487 GASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAV 566 (609)
Q Consensus 487 g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~ 566 (609)
........|..+.+..|.+|.+.|+.+.++....+++.+++-........... .....|..+++
T Consensus 406 ~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~----------------~~~~~f~~f~~ 469 (513)
T KOG0254|consen 406 FSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL----------------GIGGTFGYFGG 469 (513)
T ss_pred HHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc----------------cccchHHHHHH
Confidence 33333334555567789999999999999999999988866655444332211 01124556666
Q ss_pred HHHHHHH-HHhhhccccccccCCchhhHHHh
Q 039271 567 LTAFDFV-IYLICANWYKGINLDEDSCEKEM 596 (609)
Q Consensus 567 ~~~v~~v-~~~~~~~~~~~~~~~~~~~~~~~ 596 (609)
++.+..+ .++++.||+|++++||.++....
T Consensus 470 ~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 470 ICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 6666666 78889999999999998876544
No 51
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.5e-21 Score=206.20 Aligned_cols=398 Identities=13% Similarity=0.079 Sum_probs=243.0
Q ss_pred hHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHH
Q 039271 95 ANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLS 174 (609)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (609)
+.+++++.++.+++.+++|+++||+ |||..+.++.++..++.+++.++.. .+.+.++.++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~-------------------~~~~e~li~G 122 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKS-------------------APSFEMLILG 122 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHH-------------------hhhHHHHHHH
Confidence 5668889999999999999999996 9999999999988888887777632 2558899999
Q ss_pred HHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhh--hcccccchhHHHHHHHHHHHH
Q 039271 175 IYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILV--YYEDSGKWTLGFLVSLASAVI 252 (609)
Q Consensus 175 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~--~l~~~~g~~~~f~~~~~~~~~ 252 (609)
|++.|+..|......+.++.|..|++. ||..-.+..++.++|..++..++. .+...-.|++.+.+..+..++
T Consensus 123 R~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~ 196 (485)
T KOG0569|consen 123 RLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALL 196 (485)
T ss_pred HHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHH
Confidence 999999999999999999999999999 999999999999999999976663 444556699888888877776
Q ss_pred HHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhh-hcCCcccccCccccccCchhhHH--h-hhh
Q 039271 253 ALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYE-VAGPESAIKGSRKILHSNEIEFL--D-KAA 328 (609)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 328 (609)
.++...+ .||+|.++.. +++.++|++..++.+...+.+-. + ..+
T Consensus 197 ~l~~l~~--------------------------------~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e 244 (485)
T KOG0569|consen 197 QLALLPF--------------------------------LPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLRE 244 (485)
T ss_pred HHHHHhc--------------------------------CCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHH
Confidence 6665544 6778888777 45566666666655433221110 0 000
Q ss_pred cccccCC-CCCCCCCcccchhhHHHHHH-HHhHHHHHHHHHHHHHHHhcccceeeEecccccccccccccCcccccchhH
Q 039271 329 TITDNDL-AGPKNPWKLCTVTQVEEAKC-VLKMLPIWLCTIIYSVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDI 406 (609)
Q Consensus 329 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (609)
...+... ..+.+-|+.+.. +..|+ +...+.+.+...+-.......++.......++... .....+..+..++.
T Consensus 245 ~~~~~~~~~~~~sl~~~~~~---~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~--~a~~an~~~g~v~~ 319 (485)
T KOG0569|consen 245 IEEEELEKKKQISLRQLLKN---PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE--EAQYANLGIGIVNL 319 (485)
T ss_pred HHHhccccccCCcHHHHhcC---cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH--HHHHHHHHHHHHHH
Confidence 0000000 000111111111 01111 11111111111110000000001001100011100 00111122333333
Q ss_pred HHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccc-hhHH--HHHHH
Q 039271 407 CSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSL-SIFW--QIPQY 483 (609)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~--~i~~~ 483 (609)
...++... ++++++|| +++..++.++.+..+.+....... +.. ++.+ .+...
T Consensus 320 ~~t~~~~~----lid~~gRR-----------pLll~~~~~~~~~~~~~~~~~~l~----------~~~~~~~~y~~i~~~ 374 (485)
T KOG0569|consen 320 LSTLVSPF----LIDRLGRR-----------PLLLISLSLMAVALLLMSIALFLS----------NSFGSWLSYLCIAAI 374 (485)
T ss_pred HHHHHHHH----HHHhcCCc-----------HHHHHHHHHHHHHHHHHHHHHHHH----------HHhhhHHHHHHHHHH
Confidence 33333333 33333444 245556555555544444433220 111 2222 23444
Q ss_pred HHHHHHHHhh-hhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHH
Q 039271 484 VLVGASEVFM-YVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYF 562 (609)
Q Consensus 484 ~l~g~g~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~ 562 (609)
++..++.... .|..+-+..|++|++.|+.++++..+.+++++++-......+.... +. .+|.
T Consensus 375 ~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~---------------g~--~~fi 437 (485)
T KOG0569|consen 375 FLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI---------------GP--YVFI 437 (485)
T ss_pred HHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cc--hhhH
Confidence 4444443333 4666778889999999999999999999999988777776665432 11 3678
Q ss_pred HHHHHHHHHHHHHhhhccccccccCCchhhHHHhh
Q 039271 563 LLAVLTAFDFVIYLICANWYKGINLDEDSCEKEME 597 (609)
Q Consensus 563 ~~a~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~ 597 (609)
.+.+.+++..+..+...||+|+|+.+|+.++.+.+
T Consensus 438 lF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 438 LFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 88999999999999999999999999888776654
No 52
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=1.5e-20 Score=200.90 Aligned_cols=175 Identities=10% Similarity=0.091 Sum_probs=145.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 53 GGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
+++|..+..++..++.....+.....++. +.+++|.|..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 35666777777777777766666666665 5678999999999999999999999999999999995 999999999988
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..++.+++.+. ++++.+++.|++.|++.+...+...+++.|.+|+++ |+...
T Consensus 82 ~~i~~~l~~~~----------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~ 133 (394)
T PRK03699 82 MILAVAGLMFS----------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRL 133 (394)
T ss_pred HHHHHHHHHHc----------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHH
Confidence 88888877776 567888999999999999888888999999998877 88888
Q ss_pred HHHHHHHhhhHHHHhhhhhhccc-ccchhHHHHHHHHHHHHHHHHH
Q 039271 213 CYFYFFLNVGSLFSNTILVYYED-SGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~-~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
+..+...++|+.++|.+.+++.. ..|||+.|++.++..++..+..
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 134 LFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999998887754 5799999998776655544433
No 53
>TIGR00895 2A0115 benzoate transport.
Probab=99.89 E-value=4.2e-21 Score=204.09 Aligned_cols=172 Identities=14% Similarity=0.125 Sum_probs=141.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
|+.+...++..+......+.... ..+++.+++|.+..+.+++.+...++..++.++.|+++||+ |||+++..+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGF-AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHH
Confidence 44444444555555555544444 44556678999999999999999999999999999999996 99999999998888
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.+++.+. .+.+.+++.+++.|++.+...+...+++.|.+|+++ |++..++
T Consensus 94 ~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~ 145 (398)
T TIGR00895 94 VFTLLCALA----------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGL 145 (398)
T ss_pred HHHHHHHHc----------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhh
Confidence 877776665 567788899999999999999999999999999887 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
.+...++|..+++.+++++.+..||++.|++.++..++..++
T Consensus 146 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 187 (398)
T TIGR00895 146 MFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLL 187 (398)
T ss_pred HhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHH
Confidence 999999999999999999999899999999886544444433
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.89 E-value=4.8e-20 Score=197.65 Aligned_cols=171 Identities=13% Similarity=0.039 Sum_probs=140.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 53 GGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
+.||++....+..++...+.+...++++.|+ +++|.+..+++++.+.+.++..++.+++|+++||+ ||||++..+.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHH
Confidence 4467788888888888888777778888888 56899999999999999999999999999999996 999999999998
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..++.+++...... ..+.+.+++.|++.|++.+...+...+.+.+.+|+++ |+++.
T Consensus 88 ~~~~~~~~~~~~~~------------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~~~ 143 (402)
T TIGR00897 88 WCVGHAAFIVFGLG------------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSSAV 143 (402)
T ss_pred HHHHHHHHHHHhcc------------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHHHH
Confidence 88876554321110 1346778889999999888877777788889999888 99999
Q ss_pred HHHHHHHhhhH-HHHhhhhhhcccccchhHHHHHHHHH
Q 039271 213 CYFYFFLNVGS-LFSNTILVYYEDSGKWTLGFLVSLAS 249 (609)
Q Consensus 213 ~~~~~~~~ig~-~~~~~i~~~l~~~~g~~~~f~~~~~~ 249 (609)
|+++.+.++|. .++|.+++++.+..||+..++.....
T Consensus 144 g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 144 GWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 99999999996 58999999998888876665554433
No 55
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.89 E-value=2.2e-20 Score=199.56 Aligned_cols=166 Identities=13% Similarity=0.008 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
..+.++...++..++.......++.. .++++.+..+.+++.+.+.+...++.+++|+++||+ ||||++.++.+++.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHH
Confidence 45566667777776555444444443 568899999999999999999999999999999996 9999999999999888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
.+++.+. .+. ++.|+++|++.+...|...+++.|++|+++ |+++.++.+
T Consensus 82 ~~~~~~~----------------------~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~ 130 (393)
T PRK11195 82 CLLMLFG----------------------IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWME 130 (393)
T ss_pred HHHHHHH----------------------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 7766554 222 678899999999999999999999999887 999999999
Q ss_pred HHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 217 FFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
...++|..+||.++|++.+. .|+..+.+.+.+.+++.+.
T Consensus 131 ~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~ 169 (393)
T PRK11195 131 GSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALF 169 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874 4777776665554444333
No 56
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.89 E-value=8.7e-21 Score=208.91 Aligned_cols=169 Identities=15% Similarity=0.214 Sum_probs=145.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 53 GGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
.+|+.+..+.+..++..+..+.....+ .++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVL-TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 345666666667777777666555444 456788999999999999999999999999999999996 999999999998
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..++.+++.+. .+.+.+++.|++.|++.+...+...+++.|.+|+++ |++..
T Consensus 95 ~~~~~~~~~~~----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~ 146 (496)
T PRK03893 95 FSVGTLACGFA----------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKAS 146 (496)
T ss_pred HHHHHHHHHHH----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHH
Confidence 88888888776 678889999999999999999999999999999887 89999
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHH
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAV 251 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~ 251 (609)
++++...++|..++|.+.+++.+.++|++.|++.++..+
T Consensus 147 ~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 147 GFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987554433
No 57
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=3.1e-20 Score=197.65 Aligned_cols=156 Identities=12% Similarity=0.075 Sum_probs=137.7
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
.|.++.+++..++.++....+.+.+|.|+. ++|.|..++|++.+.+.++..++.++.|+++||+ |||+++..+.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 356788888888899888888899998876 5899999999999999999999999999999996 99999999999988
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++...+... ++++.++++|++.|++.+...|...+.+.+..++++ |++.+++
T Consensus 83 ~~~~~~~~~----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 134 (381)
T PRK03633 83 AGCAGLGLM----------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAA 134 (381)
T ss_pred HHHHHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHH
Confidence 888877776 668889999999999999988888888888888776 8999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchh
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWT 240 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~ 240 (609)
++...++|..+||.+++.+.+...+.
T Consensus 135 ~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 135 YMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHhcccccccch
Confidence 99999999999999999987754333
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=3.7e-20 Score=197.85 Aligned_cols=172 Identities=15% Similarity=0.078 Sum_probs=143.9
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
.+|.++.+.....+..+......+.+|. +.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIAD-MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 4666666666666666666655555554 4578999999999999999999999999999999996 9999999999888
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+.+... ++.+.+++.|++.|++.+...+....+..|.+++++ |+...+
T Consensus 84 ~~~~~~~~~~----------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 135 (394)
T PRK11652 84 ILGTLVALFA----------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANS 135 (394)
T ss_pred HHHHHHHHHH----------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHH
Confidence 8887777665 567889999999999988888888888899888776 888889
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHH
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALL 255 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 255 (609)
+++.+..+|..++|.+++++.+..||++.|++.++..++..+
T Consensus 136 ~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 136 LLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888999999987766554443
No 59
>PRK15075 citrate-proton symporter; Provisional
Probab=99.88 E-value=8e-20 Score=197.93 Aligned_cols=165 Identities=15% Similarity=0.125 Sum_probs=126.5
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHH-HHHHH-----HHHHHHHhHHHHHhhhccchhHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANN-VSKWT-----GTVYMCSLIGAFLSDSYWGRYLTCA 127 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~-~~~~~-----~~~~~~~~~~G~laDr~~Grr~~~~ 127 (609)
+++....+++..+++.+....+.... +.+.++++.+..+.+.. .+... +...+++++.|+++||+ ||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYA-TAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHH
Confidence 34556666667777777766655444 46778899887775443 33222 22246789999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHH--------HHHHHHHHHHHhhcCchhhhhhhhhccCCC
Q 039271 128 VFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAA--------IFYLSIYLIAFGYGGHQPTLATFGADQFDE 199 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 199 (609)
.+.+++.++.++++++ ++++ .++++|++.|++.+...+....+++|++|+
T Consensus 91 ~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 148 (434)
T PRK15075 91 VTLSIMASGTLLIAFV----------------------PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP 148 (434)
T ss_pred HHHHHHHHHHHHHHhC----------------------CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc
Confidence 9999999998888876 2222 568899999999999999889999999999
Q ss_pred CChhhhhccchhHHHHHHHHhhhHHHHhhhhhhc--------ccccchhHHHHHHHH
Q 039271 200 SKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYY--------EDSGKWTLGFLVSLA 248 (609)
Q Consensus 200 ~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l--------~~~~g~~~~f~~~~~ 248 (609)
++ |++..+++....++|..+++.+++.+ .+.+|||+.|++.++
T Consensus 149 ~~------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 149 GR------KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred cc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 98 99999998888888888777776654 246899999987543
No 60
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.88 E-value=2e-20 Score=204.50 Aligned_cols=147 Identities=10% Similarity=0.018 Sum_probs=127.8
Q ss_pred hhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcc
Q 039271 86 VLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSS 165 (609)
Q Consensus 86 ~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (609)
+++.+..+.|++.+.+.+++.++.+++|+++||+ |||+++..+.++..++.++......
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6789999999999999999999999999999996 9999999999888777766544311
Q ss_pred hhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccccc-chhHHHH
Q 039271 166 IFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSG-KWTLGFL 244 (609)
Q Consensus 166 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~-g~~~~f~ 244 (609)
.+.+.+++.|+++|++.+...|....+++|++|+++ |++..++++.+.++|..++|.+++++.+.. ||++.|+
T Consensus 129 ~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~ 202 (465)
T TIGR00894 129 GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFY 202 (465)
T ss_pred cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehh
Confidence 235678899999999999999999999999999988 999999999999999999999999998884 9999999
Q ss_pred HHHHHHHHHHHHHHh
Q 039271 245 VSLASAVIALLSYLM 259 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~ 259 (609)
+.++..++..++++.
T Consensus 203 i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 203 VFGIVGCAWSLLWFV 217 (465)
T ss_pred hhhHHHHHHHHHHHH
Confidence 988776655554443
No 61
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=1.1e-19 Score=194.29 Aligned_cols=173 Identities=11% Similarity=0.063 Sum_probs=123.9
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHH-HHHhHHHHHhhhccchhHHHH-HHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVY-MCSLIGAFLSDSYWGRYLTCA-VFQLIFV 134 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~G~laDr~~Grr~~~~-~~~~~~~ 134 (609)
..+..++..++.+++.....+.++.|+.+++|.+.+++|++.+...+... ++++++|+ +||+ ||||.++ .+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHH
Confidence 34556666788888888888999999999999999999999877666444 55555555 9996 9998754 4444444
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhcc--chhH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSK--TLFF 212 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~ 212 (609)
++..+..++ .+++.+++.+.+.+...+...|....+..|..+++. | +...
T Consensus 94 ~~~~~~~~~----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 145 (393)
T PRK15011 94 LACTLFAWN----------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------REAVMFS 145 (393)
T ss_pred HHHHHHHHh----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------chHHHHH
Confidence 555555554 455665544444443344667777888888665543 3 3344
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
++.+.+.++|..+||.+++++.+.+|||..|++.++..++..+..+.
T Consensus 146 ~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 146 SFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 67888899999999999999998899999999888766655544443
No 62
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=1.3e-19 Score=194.10 Aligned_cols=162 Identities=17% Similarity=0.216 Sum_probs=134.1
Q ss_pred HHHHHhhHHHHHHH--HHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhh
Q 039271 69 TLAFFGVGVNLVLF--LTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFL 146 (609)
Q Consensus 69 ~~~~~~~~~~~~~y--l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 146 (609)
+.++.....+.|.+ +.+++|.+..+++++.+++.++..++.+++|+++||+ |||+++..+.++..++.+++...
T Consensus 16 ~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~--- 91 (401)
T PRK11043 16 MLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWV--- 91 (401)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHh---
Confidence 33333333444433 5678999999999999999999999999999999996 99999999998888887777666
Q ss_pred ccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHH
Q 039271 147 MIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFS 226 (609)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 226 (609)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ +++.++..+...++|..++
T Consensus 92 -------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g 146 (401)
T PRK11043 92 -------------------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALA 146 (401)
T ss_pred -------------------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHH
Confidence 567888999999999988888888889999999877 7777888888889999999
Q ss_pred hhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 227 NTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 227 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
|.+++++.+.+||++.|++.++..++..+..+.
T Consensus 147 ~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 147 PLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999899999999887776665554443
No 63
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=1.9e-20 Score=203.01 Aligned_cols=175 Identities=11% Similarity=0.079 Sum_probs=133.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.++.+++...........+... .+++++ .|++..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~-~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~ 104 (438)
T TIGR00712 28 VFLGIFFGYAAYYLVRKNFALA-MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAV 104 (438)
T ss_pred HHHHHHHHHHHHHHHhccHHhh-hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHH
Confidence 3333333333333333333333 446665 599999999999999999999999999999996 9999999988888877
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
.+++... +.. ..+.+.+++.|++.|++.+...+.....+.|++|+++ |++++++++
T Consensus 105 ~~~~~~~--~~~----------------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~ 160 (438)
T TIGR00712 105 MLLMGFV--PWA----------------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWN 160 (438)
T ss_pred HHHHhcc--ccc----------------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHH
Confidence 7665543 110 1346677888999999999998988999999999998 999999999
Q ss_pred HHHhhhHHHHhhhhhhccc-ccchhHHHHHHHHHHHHHHHHHH
Q 039271 217 FFLNVGSLFSNTILVYYED-SGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
...++|+.+++.+.+.+.+ ..+||+.|++.++..++..+..+
T Consensus 161 ~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 161 CAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAF 203 (438)
T ss_pred HHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887775443 46899999998877666544433
No 64
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=1.1e-19 Score=193.52 Aligned_cols=364 Identities=10% Similarity=0.019 Sum_probs=227.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH-HHH
Q 039271 59 SILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV-VGL 137 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~-~~~ 137 (609)
+.+.+..++...++....+++|.|++ ++|.|..++|++.+.+.+...+++++.|.++||+ ||++.......+.. +..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 33445555555665666788999985 6899999999999999999999999999999996 98543322221111 111
Q ss_pred H-HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 138 V-LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 138 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
+ +.... ++++.+++.|++++.+.+...|...++..+. .++ |++.++...
T Consensus 85 ~~~~~~~----------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~g~~~ 134 (382)
T TIGR00902 85 AAFSAGA----------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDYGKVR 134 (382)
T ss_pred HHHHHhh----------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCccHHH
Confidence 1 11122 5688898999999988888888888876553 333 778899999
Q ss_pred HHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCc
Q 039271 217 FFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANS 296 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 296 (609)
...++|..++|.+++++.+.+||+..|++.++..++.++.. ..+++. +|+++...+
T Consensus 135 ~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~-------------------- 190 (382)
T TIGR00902 135 LIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIGF-LIKPTI---PPKDAIPED-------------------- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HcCCCC---CCCcccccc--------------------
Confidence 99999999999999999999999999987765433333222 222211 110000000
Q ss_pred hhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhH-HHHHHHHHHHHHHHhc
Q 039271 297 DELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKM-LPIWLCTIIYSVVFTQ 375 (609)
Q Consensus 297 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 375 (609)
+ .....+.. ++...++++.. +..++....+...+..
T Consensus 191 ---------~----------~~~~~~~~------------------------~~l~~~~~~~~l~~~~l~~~~~~~~~~~ 227 (382)
T TIGR00902 191 ---------E----------SQGDSAFI------------------------ALLKNPMNLRFLAAVCLIQGAHAAYYGF 227 (382)
T ss_pred ---------c----------cccchhHH------------------------HHHcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000 00011122121 1122222222222222
Q ss_pred ccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 039271 376 MASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAG 455 (609)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 455 (609)
.+.++.. .+.+ ....+....+..+..++...+.+++ .+|++ +...+.++.++..+..+.+.
T Consensus 228 ~~~~l~~--~g~s------~~~~g~l~~~~~~~~i~~~~~~~~l----~~r~g-------~~~~l~~~~~~~~~~~~~~~ 288 (382)
T TIGR00902 228 SAIYWQA--AGIS------ASATGLLWGIGVLAEIIIFAFSNKL----FQNCS-------ARDLLLISAIACVGRWAIIG 288 (382)
T ss_pred HHHHHHH--CCCC------HhHHHHHHHHHHHHHHHHHHHhHHH----HhhCC-------HHHHHHHHHHHHHHHHHHHH
Confidence 2222211 1111 1122333444455555555555444 45532 44567788888888887776
Q ss_pred HHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHH-HHHHHHHHHHHHHHH
Q 039271 456 ATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMA-SISFGNYVSSLLVVM 534 (609)
Q Consensus 456 ~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-~~~lg~~ig~~~~~~ 534 (609)
..+ +.+.++...+++++..+...+....++.+. |++.++++++++++ ...+|..+|+.+.|.
T Consensus 289 ~~~----------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 289 AIE----------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred hHh----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 532 556667778999999999999999999988 99999999999874 577999999999998
Q ss_pred hhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHH
Q 039271 535 VMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVI 574 (609)
Q Consensus 535 i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~ 574 (609)
+.+.. + . ..|++.+++++++.++
T Consensus 352 l~~~~---------------g-~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 352 IYPTL---------------G-A-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHhc---------------c-H-HHHHHHHHHHHHHHHH
Confidence 86532 1 1 2467777777766544
No 65
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.88 E-value=3.2e-20 Score=200.16 Aligned_cols=391 Identities=11% Similarity=0.014 Sum_probs=219.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+..+.+.+..++..++++.+.++++.|+++++|.+..++|++.+++.++..+++++.|+++||+ |||+++..+..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 3566666777777787778889999999999999999999999999999999999999999995 999999887665554
Q ss_pred HHHHHHHHh-hhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 136 GLVLLSVLS-FLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
+........ .+. . ....+.+..+.++..+...+.....+.++.+...+ .++..++.
T Consensus 89 ~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~g~ 145 (420)
T PRK09528 89 LFGPFFIYVFAPL------------------L-QYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSR----RSGFEYGR 145 (420)
T ss_pred HHHHHHHHHHHHH------------------H-HHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHh----hccccchh
Confidence 433221110 000 0 00011222222332232222222223333221111 16667788
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCC
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPA 294 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 294 (609)
.+...++|..++|.+++++.+ .+|++.|++.++..++.++.++..+++.++++...+.
T Consensus 146 ~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 203 (420)
T PRK09528 146 ARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA--------------------- 203 (420)
T ss_pred hHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccc---------------------
Confidence 888889999999999998876 5899999988777666555544433321111000000
Q ss_pred CchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHH-HHHHHHH
Q 039271 295 NSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCT-IIYSVVF 373 (609)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 373 (609)
. +.+ + +.. ...+..... + .+.++......... ..+....
T Consensus 204 ~-----~~~------~------~~~--~~~~~~~~l--------~-------------~~~~~~l~l~~~~~~~~~~~~~ 243 (420)
T PRK09528 204 L-----GAN------A------SAV--SLKDALALL--------K-------------LPKFWFLVLYVIGVACFYDVFD 243 (420)
T ss_pred h-----hcc------c------ccc--cHHHHHHHc--------c-------------CCCeEeehHHHHHHHHHHHHHH
Confidence 0 000 0 000 000000000 0 00111111111111 1111111
Q ss_pred hcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 039271 374 TQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIA 453 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (609)
.+.+.++.......... ....+.+..+..+...+...+.+++. +|+++++ .+..+.++.+++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~g~l~----dr~g~~~-------~~~~~~~l~~~~~~l 308 (420)
T PRK09528 244 QQFPNFFASFFATPEQG----TRVFGYLNSFQVFLEALIMFFAPFII----NRIGAKN-------ALLLAGTIMAVRIIG 308 (420)
T ss_pred HHHHHHHHHHHhccCcc----hHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCcch-------hhHHHHHHHHHHHHH
Confidence 12222221110000000 01123334444444455555665554 4443332 356666667777666
Q ss_pred HHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHH-HHHHHHHHHHHHHHHH
Q 039271 454 AGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSL-CMASISFGNYVSSLLV 532 (609)
Q Consensus 454 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~~~lg~~ig~~~~ 532 (609)
+++.. +.++++...++.+++.....+....++.+..|++.+++..+. +++...+|+.+++.+.
T Consensus 309 ~~~~~----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~ 372 (420)
T PRK09528 309 SGFAT----------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLA 372 (420)
T ss_pred HHhcc----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHH
Confidence 65531 344555666777877777777777888899999999988766 6777889999999999
Q ss_pred HHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhc
Q 039271 533 VMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICA 579 (609)
Q Consensus 533 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~ 579 (609)
+++.+.. + +...|.+.+++.++..++.+...
T Consensus 373 G~l~~~~------G----------~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 373 GNLYDSI------G----------FQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHhh------C----------chHHHHHHHHHHHHHHHHHHHHh
Confidence 9876532 1 33467777777766665555443
No 66
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=2.5e-20 Score=196.62 Aligned_cols=151 Identities=13% Similarity=0.097 Sum_probs=133.1
Q ss_pred HHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 039271 79 LVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFI 158 (609)
Q Consensus 79 ~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (609)
..+++.+++|.+..+.+++.+...++..++.++.|+++||+ |||+++..+.++..++.+++.++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~--------------- 80 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS--------------- 80 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh---------------
Confidence 34577888999999999999999999999999999999996 99999999999988888888877
Q ss_pred ccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHh-hhhhhccccc
Q 039271 159 SCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSN-TILVYYEDSG 237 (609)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~-~i~~~l~~~~ 237 (609)
.+.+.+++.|++.|++.+...+...+++.|++|+++ |++..++.+.+.++|..++| .+++.+.+..
T Consensus 81 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00881 81 -------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELY 147 (379)
T ss_pred -------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhcC
Confidence 568889999999999999999999999999999888 99999999999999999999 5777777778
Q ss_pred chhHHHHHHHHHHHHHHHHHH
Q 039271 238 KWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 238 g~~~~f~~~~~~~~~~~~~~~ 258 (609)
+|++.|++.++..++..+..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 148 SWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 999999888766655444443
No 67
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=1.9e-19 Score=190.84 Aligned_cols=155 Identities=13% Similarity=0.113 Sum_probs=136.0
Q ss_pred hhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 039271 74 GVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGC 153 (609)
Q Consensus 74 ~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (609)
...+.++.+. +++|.+..+++++.+.+.++..++.+++|+++||+ |||+++..+.++..++..++...
T Consensus 9 ~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~---------- 76 (377)
T PRK11102 9 MYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA---------- 76 (377)
T ss_pred HHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH----------
Confidence 3446677665 46999999999999999999999999999999996 99999999999988888887776
Q ss_pred CCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhc
Q 039271 154 GDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l 233 (609)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++.+
T Consensus 77 ------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l 138 (377)
T PRK11102 77 ------------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWL 138 (377)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888999999999999999999999999999888 99999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHH
Q 039271 234 EDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 234 ~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
.+..+|++.|++.++..++..+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 139 LVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHH
Confidence 9888999999988776666554443
No 68
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=3.2e-21 Score=198.71 Aligned_cols=180 Identities=17% Similarity=0.136 Sum_probs=159.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 53 GGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
..++.+.++++.+.++...-|.+...+ .-.++.+|++.+..|++.+.+.+...++.|++|+|+||| .|++++.+|..+
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~i 107 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFI 107 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHH
Confidence 345667778888888888888765533 346778999999999999999999999999999999997 999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
+.++.++..++ ..+|++.+.|.+.|+|.+.+.|+.+++++|.||.++ |++.+
T Consensus 108 W~~Av~~~~fs----------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~ 159 (493)
T KOG1330|consen 108 WTLAVFASGFS----------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVL 159 (493)
T ss_pred HHHHHHHHHHH----------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHH
Confidence 99999988888 779999999999999999999999999999999998 99999
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
+++|+++++|+++|.++++.+....+ |||.|++.+++.++..++.++..+
T Consensus 160 ~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 160 GIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred HHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 99999999999999999999988766 999999998887776665544433
No 69
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.86 E-value=1.2e-18 Score=186.09 Aligned_cols=169 Identities=15% Similarity=0.100 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 039271 59 SILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLV 138 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 138 (609)
....+..+....++....+.+|. +.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+.+..+.++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHH
Confidence 33444445555555555555654 4567999999999999999999999999999999995 999999999988888887
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
++... .+.+.+++.|++.|++.+...+...+++.|.+|+++ |++..++.+..
T Consensus 84 ~~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~ 135 (392)
T PRK10473 84 LCSLA----------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGI 135 (392)
T ss_pred HHHHh----------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHH
Confidence 77665 557778889999999999989999999999999888 99999999999
Q ss_pred HhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 039271 219 LNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
.++|..++|.+++.+.+..||++.|++.++..++..++.
T Consensus 136 ~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 136 TCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHH
Confidence 999999999999988888899999998876665555443
No 70
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.86 E-value=1.3e-18 Score=191.20 Aligned_cols=180 Identities=14% Similarity=0.091 Sum_probs=140.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhcc-----chhHH
Q 039271 51 NKGGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYW-----GRYLT 125 (609)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-----Grr~~ 125 (609)
+...+|+.+.++...+...+..+...+.++.|+++ .|.+.++++..... ... .++.++.|.++|| + ||||.
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~~-~~~-~~~~~l~gpl~Dr-~~~~~~Grrr~ 82 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSLV-GQA-YVFKFLWSPLMDR-YTPPFLGRRRG 82 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHH-HHH-HHHHHHHHHHHHc-ccccCCCCchH
Confidence 34456777778888888888888888888988764 69999999986222 222 3688999999999 6 99886
Q ss_pred -HHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhh
Q 039271 126 -CAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKE 204 (609)
Q Consensus 126 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (609)
+..+.+...++...+++. .| ..+++.+.+.+++.+++.+...+...++..|++|+++
T Consensus 83 ~ll~~~i~~~~~~~~~a~~-~~------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~--- 140 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFL-EP------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE--- 140 (491)
T ss_pred HHHHHHHHHHHHHHHHHHc-CC------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh---
Confidence 556666555665555554 11 1457788888999999999999999999999999888
Q ss_pred hhccchhHHHHHHHHhhhHHHHhhhhhhccc-ccchhHHHHHHHHHHHHHHHHHHh
Q 039271 205 RQSKTLFFCYFYFFLNVGSLFSNTILVYYED-SGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 205 ~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
|+++.++...+.++|..+++.+++++.+ ..|||..|++.++..++..+..+.
T Consensus 141 ---rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 141 ---RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988 579999999988776665554443
No 71
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=8e-19 Score=187.73 Aligned_cols=387 Identities=11% Similarity=0.010 Sum_probs=226.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.+|.+....++...++..+.++++.|+++++|.+..+.+++.+.+.++..+++++.|+++||+ |||+.++.+.+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 3567777778888888888889999999999999999999999999999999999999999996 999999887766554
Q ss_pred HHHHHHHHh-hhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 136 GLVLLSVLS-FLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
+........ .+... ......+++.+++.+++.+...+....+..|..+ + ++..++.
T Consensus 81 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~~~g~ 137 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQ---------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNFEYGK 137 (396)
T ss_pred HHHHHHHHHhhhHHH---------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------cccccch
Confidence 433222110 11000 0123445666778888888888877777666422 2 3345677
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCC
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPA 294 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 294 (609)
.....++|..+||.+++.+.+ .+|++.|++.++..++..++.+...++. |+++...+ . .
T Consensus 138 ~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------------~-~-- 196 (396)
T TIGR00882 138 ARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA----PSSATVAN-------------A-L-- 196 (396)
T ss_pred hhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC----chhhhhhc-------------c-c--
Confidence 777889999999999998865 6999999988776666554444332221 11000000 0 0
Q ss_pred CchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHH-HHHHHHHHHH
Q 039271 295 NSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIW-LCTIIYSVVF 373 (609)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 373 (609)
+ . ++ +..+..+..+.. ++ |.++...... .....+....
T Consensus 197 ------~-~--~~--------~~~~~~~~~~~l-----------------------~~-~~~~~~~l~~~~~~~~~~~~~ 235 (396)
T TIGR00882 197 ------G-A--NA--------SAFSLKLALELF-----------------------RQ-RKFWMFVLYVVGVACVYDVFD 235 (396)
T ss_pred ------c-c--cc--------CCCCHHHHHHHH-----------------------cC-CcHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 000000000000 00 1111111111 1111111111
Q ss_pred hcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 039271 374 TQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIA 453 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (609)
.+.+.++.......... ....+....+..+...+.....+++ .+|+++| ..+.++.++.++++..
T Consensus 236 ~~~~~y~~~~~~~~~~~----~~~~g~~~~~~~i~~~~~~~~~g~l----~~r~g~~-------~~l~~~~~l~~l~~~~ 300 (396)
T TIGR00882 236 QQFANFFTSFFATPQQG----TRVFGYVTTMGELLNALIMFCAPLI----INRIGAK-------NALLIAGTIMSVRIIG 300 (396)
T ss_pred HHHHHHHHHhccccccc----hHHHHHHHHHHHHHHHHHHHHHHHH----HHHhccc-------hhHHHHHHHHHHHHHH
Confidence 11122211100000000 0011223333444444444555444 4444433 2356666666666655
Q ss_pred HHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHH-HHHHHHHHHHHHHHHH
Q 039271 454 AGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSL-CMASISFGNYVSSLLV 532 (609)
Q Consensus 454 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~~~lg~~ig~~~~ 532 (609)
+... .+.++++...++.+++..........+..+..|++.+++..+. ++....+|+.+++.+.
T Consensus 301 ~~~~----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~ 364 (396)
T TIGR00882 301 SSFA----------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLA 364 (396)
T ss_pred HHhc----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhH
Confidence 4432 2445556667778877766666666778888899999887776 5678899999999999
Q ss_pred HHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 039271 533 VMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIY 575 (609)
Q Consensus 533 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~ 575 (609)
+.+.+.. ++...|.+.+++.++..++-
T Consensus 365 G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 365 GNMYDSI----------------GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHhc----------------ccHHHHHHHHHHHHHHHHHH
Confidence 9876532 23446777777666665544
No 72
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.86 E-value=2.8e-21 Score=204.93 Aligned_cols=364 Identities=32% Similarity=0.526 Sum_probs=234.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCC-
Q 039271 123 YLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESK- 201 (609)
Q Consensus 123 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~- 201 (609)
.|+++++.+++.+|++++.+++.|... .++.+...++++.+++++|.|+..|+..++.+|++++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~-------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~ 67 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL-------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD 67 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh-------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch
Confidence 378999999999999998888766522 123456789999999999999999999999999999873
Q ss_pred hhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceec-CCCCCChhH-HHH
Q 039271 202 PKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYV-KPCGNPLPR-VAQ 279 (609)
Q Consensus 202 ~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 279 (609)
++ |.+++.++|++.|+|+.+++.+.+++.+++||.+.|.++++.++++++.++..++++.++ +|.+++..+ ...
T Consensus 68 ~~----~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~ 143 (372)
T PF00854_consen 68 SR----RDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKL 143 (372)
T ss_dssp TH----HHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHH
T ss_pred hh----hhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHH
Confidence 32 778999999999999999999999999999999999999999999999999999988887 667777666 344
Q ss_pred HHHHHHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcc-cchhhHHHHHHHHh
Q 039271 280 VFIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKL-CTVTQVEEAKCVLK 358 (609)
Q Consensus 280 ~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 358 (609)
+...+.+++....|....++....+..+ ......... . .+........ ...|.. +..+++++.+.+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~k~~~~ 212 (372)
T PF00854_consen 144 VLVAAFKKRKLAVPKGSSWLDWALFQYS----ERSIFGIIV-F-IRAAVIFFPE-----IFFWALFCQVQRVEELKALIR 212 (372)
T ss_dssp HHHHHHHHHCCCH-HHHHHHHHHHHHHC----CCCCCCCCC-H-HHHHHHHCCC-----HHHHTTTSSTTTHHHCCHHHC
T ss_pred HHHHHHHHhhcccccchHHHHHhhhhhh----hhhhhhhhh-h-ccchhhhhhh-----hhhcccCCccceeeeeeeeee
Confidence 4445555544444333333322221100 000000000 0 0000000000 000110 12334455566666
Q ss_pred HHHHHHHHHHHHHHHhcccceeeEecccccccccc-cccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChh
Q 039271 359 MLPIWLCTIIYSVVFTQMASLFVEQGDVMNSHIGE-FRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSEL 437 (609)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 437 (609)
.+..+...+.++..+.+.......+...++....+ +..++..+.+++.+.++++.++.+++++|+.++ .+ ..++.
T Consensus 213 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~-~~---~~~~~ 288 (372)
T PF00854_consen 213 FLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR-GI---QPSPP 288 (372)
T ss_dssp HHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------H
T ss_pred ccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh-cc---cchhh
Confidence 66666667777777777776666666666666666 889999999999999999999999999998882 22 24588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHH
Q 039271 438 QRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLC 517 (609)
Q Consensus 438 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 517 (609)
.++.+|++++.++++....++..+....+..| ..+.+|.++.+++..++|....+...+..+|.+|++..+..+|++
T Consensus 289 ~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~ 365 (372)
T PF00854_consen 289 QKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG---KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIW 365 (372)
T ss_dssp HHHHHH-HHHHHHHHTTTHHHH---HH----T---T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhcccccC---CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHH
Confidence 89999999999999988877764444444333 334477789999999999999998888777777777777666666
Q ss_pred HHHH
Q 039271 518 MASI 521 (609)
Q Consensus 518 ~~~~ 521 (609)
....
T Consensus 366 ~~~~ 369 (372)
T PF00854_consen 366 FALS 369 (372)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.85 E-value=4.8e-18 Score=182.97 Aligned_cols=386 Identities=11% Similarity=0.048 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccch-hHHHHHHHHHHHHHHHH
Q 039271 61 LLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGR-YLTCAVFQLIFVVGLVL 139 (609)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~~~~~~~~~~~~~~~ 139 (609)
+.+..++...++-...++++.|+.+++|++..+.|++.+.+.++..+++++.|+++||+ || |+++..+.++..++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 44455566666666679999999999999999999999999999999999999999995 65 77777777666565555
Q ss_pred HHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccC--------CCCChhhhhccchh
Q 039271 140 LSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQF--------DESKPKERQSKTLF 211 (609)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~r~~~ 211 (609)
..+. ++++.+++.+++.+++.+...+...++..+.. .... |.+.
T Consensus 86 ~~~~----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~~r~ 137 (418)
T TIGR00889 86 AAQV----------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------PIRV 137 (418)
T ss_pred HHHh----------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------Ceee
Confidence 5544 45777788888888877776666555432221 1111 3344
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccc
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVV 291 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (609)
+| .+|.++||.+++.+.....|. +|++.++..++..++.+. .++.++.+.+. . .+..+
T Consensus 138 ~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~-~-~~~~~------------ 195 (418)
T TIGR00889 138 MG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALT-LPDIPVAKSTA-K-MSIKV------------ 195 (418)
T ss_pred eh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhc-CCCCCCCcccc-c-cCHHH------------
Confidence 43 478888888888774333344 455555544444433322 22211100000 0 00000
Q ss_pred cCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhH-HHHHHHHHHHH
Q 039271 292 VPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKM-LPIWLCTIIYS 370 (609)
Q Consensus 292 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 370 (609)
....+..+ ..+.+++... +..++......
T Consensus 196 --------------------------~~~~~~~~------------------------~~k~~~~~~~~~~~~~~~~~~~ 225 (418)
T TIGR00889 196 --------------------------MLGLDAFI------------------------LFKNKRMAIFFFFSMLLGAPLQ 225 (418)
T ss_pred --------------------------HhhhhHHH------------------------HhcCCCeeeHHHHHHHHHhHHH
Confidence 00000000 0000010011 11111111111
Q ss_pred HHHhcccceeeEeccccccccc-cc-ccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHH
Q 039271 371 VVFTQMASLFVEQGDVMNSHIG-EF-RLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGM 448 (609)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~ 448 (609)
..+.....+.... +.+.... ++ ....+....+..+..++...+.+++.++.++| ..+..+.++..
T Consensus 226 ~~~~~~~~~~~~~--g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----------~~l~~~~~~~~ 292 (418)
T TIGR00889 226 ITNIFGNGFLHEF--GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----------KVMLLSLVAWA 292 (418)
T ss_pred HHHHhHHHHHHHh--cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHH
Confidence 1111111111110 0000000 00 01123344455555555566666654333332 34677777777
Q ss_pred HHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHH-HHHHHHHHH
Q 039271 449 LAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCM-ASISFGNYV 527 (609)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~lg~~i 527 (609)
+++..+.... +.....+.++...++.+++++...+....++.+.+|++.|++++|+.+ +.+.+|+.+
T Consensus 293 v~~~l~~~~~------------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 293 LRFGFFAYGD------------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHHHHHHHcC------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 7766655421 011123344556788888888888888899999999999999999997 568899999
Q ss_pred HHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhcccc
Q 039271 528 SSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWY 582 (609)
Q Consensus 528 g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~ 582 (609)
|+.+.|.+.+..+..+ ..++...|.+.+++.++..++++++.++.
T Consensus 361 Gp~l~G~l~~~~g~~~----------~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 361 GYILSGVMVEKMFAYG----------TFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHhcccc----------CCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999998875431110 11345567788888888887777777654
No 74
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.85 E-value=2.1e-18 Score=188.86 Aligned_cols=357 Identities=16% Similarity=0.117 Sum_probs=235.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.+..+...+...+++.+....-++-+.. ++.-|+...+++.....+-..+..+++|.++||+ .|||+++.+-++..+.
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALV 88 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHH
Confidence 3444445555556655544444443333 4667889999999999999999999999999996 9999999999888766
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
.+.+++..... ..+.+.+++..++.|++.+...|+..+++.|+.|+++ ...+.++.+
T Consensus 89 ~~~L~~l~~~~-----------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s 145 (524)
T PF05977_consen 89 ALLLAVLAFFG-----------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNS 145 (524)
T ss_pred HHHHHHHHHhC-----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHH
Confidence 66555543211 1457888888999999999999999999999999988 888999999
Q ss_pred HHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCc
Q 039271 217 FFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANS 296 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 296 (609)
...|+...+||.++|.+....|..+.|.+.+++.++.++++...++..+. +..+.+...+.+...++.
T Consensus 146 ~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~---~~~~~e~~~~~l~~G~ry--------- 213 (524)
T PF05977_consen 146 ISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPP---SSLPRERFFSALREGLRY--------- 213 (524)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc---cccchhhhhhhHHHHHHH---------
Confidence 99999999999999999988899999999888777766555444332111 111111111111000000
Q ss_pred hhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHH-HHHHHHHHHHHHhc
Q 039271 297 DELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLP-IWLCTIIYSVVFTQ 375 (609)
Q Consensus 297 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 375 (609)
+...+.+...+. .+++.... ..+..
T Consensus 214 -----------------------------------------------------v~~~~~l~~~l~~~~~~~l~~-~a~~a 239 (524)
T PF05977_consen 214 -----------------------------------------------------VRSSPPLRSVLLRSFLFNLFA-SAVWA 239 (524)
T ss_pred -----------------------------------------------------HhcchHHHHHHHHHHHHHHhh-hHHHH
Confidence 000011111111 11111111 11111
Q ss_pred ccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 039271 376 MASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAG 455 (609)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 455 (609)
..+.+..+ .+++-...-+.+.+..+++.++.+.+..++ .+|+. ....+..+.++.+++++.++
T Consensus 240 LlPl~a~~------~l~~~a~~yGll~a~~gvGai~Gal~~~~l----~~~~~-------~~~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 240 LLPLFARD------VLGGGASGYGLLLAAFGVGAILGALLLPRL----RRRLS-------SRRLVLLASLLFALALLLLA 302 (524)
T ss_pred hhhHHHHH------HhCCcHHHHHHHHHHHHHHHHHHHHHHHHh----hcccC-------cchhhHHHHHHHHHHHHHHh
Confidence 11111111 111112223445556666666666665543 33322 22345667777777777776
Q ss_pred HHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039271 456 ATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMV 535 (609)
Q Consensus 456 ~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i 535 (609)
+. .+.+..++..++.|++.....+..++.+.+..|+++||++.|++++....+..+|+++.|.+
T Consensus 303 l~----------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~l 366 (524)
T PF05977_consen 303 LS----------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFL 366 (524)
T ss_pred cc----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 25556667778889999988899999999999999999999999999999999999999987
Q ss_pred hh
Q 039271 536 MG 537 (609)
Q Consensus 536 ~~ 537 (609)
.+
T Consensus 367 a~ 368 (524)
T PF05977_consen 367 AD 368 (524)
T ss_pred HH
Confidence 65
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.85 E-value=1.2e-18 Score=211.19 Aligned_cols=359 Identities=12% Similarity=0.016 Sum_probs=214.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCch--hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQEN--ANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
+.+..+++..++.++...+....+..++.+.++.+. ...+++.+++.+...++.+++|+++||+ |||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 455555666666666655555555666665666543 3468889999999999999999999996 9999999988776
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
+++.++..++.. ..+++.++++|++.|++.+...+...++++|++|+++ |+++++
T Consensus 88 ~~~~~~~~~~~~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~ 142 (1146)
T PRK08633 88 VGLTLLIVLAYY-------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANG 142 (1146)
T ss_pred HHHHHHHHHHHH-------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhh
Confidence 666555444311 1457889999999999999999999999999999988 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccc--------c-chhHHHHHHHHHH-HHHHHHHHhcCCcceecCCCCCChhHHHHHHHH
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDS--------G-KWTLGFLVSLASA-VIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIA 283 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~--------~-g~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (609)
++..+.++|.++|+.+++++.+. + +|++.+.+.++.. ++++++.+.. ++.+...+......
T Consensus 143 ~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------- 213 (1146)
T PRK08633 143 LLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRL-PKVPAAAPEVFDKK-------- 213 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcC-cCCCCCCccccccc--------
Confidence 99999999999999999998765 2 3444443333222 2222222222 22111100000000
Q ss_pred HHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHH-HH
Q 039271 284 AARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKML-PI 362 (609)
Q Consensus 284 ~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 362 (609)
. ........+. ++ .+...+.+...+ ..
T Consensus 214 --------------------------~------~~~~~~~~~~---------------~~-----~l~~~~~~~~~~~~~ 241 (1146)
T PRK08633 214 --------------------------K------YLFPKLLWRN---------------LK-----LLRSDRVLWLAIIGL 241 (1146)
T ss_pred --------------------------c------cccHHHHHHH---------------HH-----HHhcCcHHHHHHHHH
Confidence 0 0000000000 00 000001111111 11
Q ss_pred HHHHHHHHHHHhcccceeeEeccccccccccccc-CcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHH
Q 039271 363 WLCTIIYSVVFTQMASLFVEQGDVMNSHIGEFRL-PAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMG 441 (609)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 441 (609)
.+.....+.....++.++.. ..+.+ .. ..+.+.....++.++...+.+++ .+|+.++ ..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~-~~g~s------~~~~~g~~~~~~~ig~~~g~~~~g~l----~~r~~~~-------~~~~ 303 (1146)
T PRK08633 242 SYFWFISQLAQANFPAYAKE-VLGLD------NTFQVQYLLAASAIGIGIGSLLAGRL----SGRHIEL-------GLVP 303 (1146)
T ss_pred HHHHHHHHHHHHhhHHHHHH-HhCCC------cHHHHHHHHHHHHHHHHHHHHHHHHH----hCCceEc-------cchh
Confidence 11111111111111111111 00000 11 22334444445555555555554 4443322 2355
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHH
Q 039271 442 IGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASI 521 (609)
Q Consensus 442 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 521 (609)
++.++++++++++.+. .+.+++++..++.+++.+...++.++++.+.+|++.||+++|+.++..
T Consensus 304 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~ 367 (1146)
T PRK08633 304 LGALGLALSLFLLPTA----------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQ 367 (1146)
T ss_pred HHHHHHHHHHHHHHHh----------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHH
Confidence 6666666666666543 144556666788888888888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 039271 522 SFGNYVSSLLVVMV 535 (609)
Q Consensus 522 ~lg~~ig~~~~~~i 535 (609)
.+|..+++.+.+.+
T Consensus 368 ~lg~~~~~~~~~~l 381 (1146)
T PRK08633 368 NVGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988877766654
No 76
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.85 E-value=3.1e-18 Score=185.41 Aligned_cols=354 Identities=14% Similarity=0.106 Sum_probs=212.9
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhH-HHHHHHHHHHHHHHHHH
Q 039271 66 GLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY---WGRYL-TCAVFQLIFVVGLVLLS 141 (609)
Q Consensus 66 ~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~~~~~~~~ 141 (609)
+..++.+..+.++++.|+++++|+++.++|++.++..+...+..|+.|+++||. +|||| .++.+.+...++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 445555666778899999999999999999999999999999999999999983 37755 56667677666666555
Q ss_pred HHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCC-CChhhhhccchhHHHHHHHHh
Q 039271 142 VLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDE-SKPKERQSKTLFFCYFYFFLN 220 (609)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~ 220 (609)
.. |... .......+.+.+++.+++.+....+..++..|..++ ++ |++..++.+...+
T Consensus 89 ~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~~~~~~~ 146 (437)
T TIGR00792 89 TT--PDFS--------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTFRRFGAT 146 (437)
T ss_pred hC--CCCC--------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHHHHHHHH
Confidence 43 2210 012245566677778888888888888899998754 44 8888888888888
Q ss_pred hhHHHHhhhhhhcc-------cccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccC
Q 039271 221 VGSLFSNTILVYYE-------DSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVP 293 (609)
Q Consensus 221 ig~~~~~~i~~~l~-------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 293 (609)
+|+.+++.+.+.+. +..+|++.+++.+++.++..+..+...++.+++.+..++
T Consensus 147 ~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~-------------------- 206 (437)
T TIGR00792 147 LGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE-------------------- 206 (437)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc--------------------
Confidence 88877766654443 246899998888776655554443322221100000000
Q ss_pred CCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHH
Q 039271 294 ANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVF 373 (609)
Q Consensus 294 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (609)
++.+..+.. +.+...|.+.......+.....+...
T Consensus 207 -------------------------~~~~~~~~~--------------------~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (437)
T TIGR00792 207 -------------------------KKLSLKQIF--------------------KALFKNDQLLILCLAYLFYNLAFNIK 241 (437)
T ss_pred -------------------------cCCCHHHHH--------------------HHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 00001111111111111111111111
Q ss_pred hcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 039271 374 TQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIA 453 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (609)
.....++..... .. ......+..+..+..++..++..++ .+|+++| ..+.++.++.+++++.
T Consensus 242 ~~~~~~~~~~~~--~~-----~~~~~~~~~~~~i~~ii~~~~~~~l----~~r~g~~-------~~~~~~~~~~~~~~~~ 303 (437)
T TIGR00792 242 NGVQVYYFTYVL--GD-----PELFSYMGSIAIVAGLIGVLLFPRL----VKKFGRK-------ILFAGGILLMVLGYLI 303 (437)
T ss_pred cchhheeEeeec--CC-----hHHHHHHHHHHHHHHHHHHHHHHHH----HHHhCcH-------HHHHHHHHHHHHHHHH
Confidence 122222222111 10 1112233344455566666666665 3444322 2456666666666665
Q ss_pred HHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCC-------cchhHHHHHHHHHHHHHHHH
Q 039271 454 AGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAP-------DGIKSFGSSLCMASISFGNY 526 (609)
Q Consensus 454 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~lg~~ 526 (609)
+.+. ..+.+..+...++.+++.+...+..++++.+..| ++.+|.+.|++++...+|..
T Consensus 304 ~~~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~ 368 (437)
T TIGR00792 304 FFFA---------------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQA 368 (437)
T ss_pred HHHc---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHH
Confidence 5442 1133444555667788888888888888877764 56789999999999999999
Q ss_pred HHHHHHHHhhhhc
Q 039271 527 VSSLLVVMVMGIT 539 (609)
Q Consensus 527 ig~~~~~~i~~~~ 539 (609)
+++.+.+.+.+..
T Consensus 369 lg~~i~g~ll~~~ 381 (437)
T TIGR00792 369 LAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999887765
No 77
>PRK10133 L-fucose transporter; Provisional
Probab=99.85 E-value=3.8e-18 Score=184.82 Aligned_cols=152 Identities=13% Similarity=0.056 Sum_probs=121.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
...+..+.+..+...+........+|. +++++|.+..+.++..+.+.++..++.++.|+++||+ ||||++..+.+++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~ 102 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 344555555555555555555555554 5889999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.+++.... . .++++.++++|+++|+|.+...+..++++.|..|+++ |....+.
T Consensus 103 ~~~~l~~~~~-~------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~ 157 (438)
T PRK10133 103 LGAALFWPAA-E------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNL 157 (438)
T ss_pred HHHHHHHHHH-h------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHH
Confidence 9887754221 0 1568889999999999999999999999998766554 5556788
Q ss_pred HHHHHhhhHHHHhhhhhhc
Q 039271 215 FYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l 233 (609)
++....+|..+||.+++.+
T Consensus 158 ~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 158 AQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888889999998887654
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.85 E-value=6.1e-19 Score=213.36 Aligned_cols=338 Identities=11% Similarity=-0.020 Sum_probs=197.0
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHH
Q 039271 92 ANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIF 171 (609)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (609)
...++..+++.+...++.+++|+++||+ |||+++.......++...+..... . ..+++.+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~-~------------------~~s~~~l 111 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGF-H------------------LNSVPLL 111 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHH-H------------------HhhHHHH
Confidence 4467888899999999999999999996 999986442222222111111110 0 1468899
Q ss_pred HHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHH
Q 039271 172 YLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAV 251 (609)
Q Consensus 172 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~ 251 (609)
+++|+++|++.++..|+..+++.|++|+++ |+++.++.+.+.++|.++||.++|++.+..+|++.|+..++..+
T Consensus 112 ~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~ 185 (1140)
T PRK06814 112 FAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAV 185 (1140)
T ss_pred HHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 999999999999999999999999999988 99999999999999999999999999998999999855555555
Q ss_pred HHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhccc
Q 039271 252 IALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATIT 331 (609)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (609)
+++++.+..++..+.+++.... ....+ +..+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------------------------------~~~~~----- 217 (1140)
T PRK06814 186 LGWLASLFIPKTGNAAPDLKID-RNIIR------------------------------------------STITL----- 217 (1140)
T ss_pred HHHHHHhhCCCCCCCCCCCeec-cchHH------------------------------------------HHHHH-----
Confidence 5444443332211100000000 00000 00000
Q ss_pred ccCCCCCCCCCcccchhhHHHHHHHHhHH-HHHHHHHHHHHHHhcccceeeEecccccccccccccCcccccchhHHHHH
Q 039271 332 DNDLAGPKNPWKLCTVTQVEEAKCVLKML-PIWLCTIIYSVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVL 410 (609)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (609)
++ .+...+.++... ..++....+.....+.+.+... ..+.+ ....+.+.....++.+
T Consensus 218 ----------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~~------~~~~g~~~~~~~~g~~ 275 (1140)
T PRK06814 218 ----------LK-----YAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKE-TLGGD------ENVATLFLAVFSVGVA 275 (1140)
T ss_pred ----------HH-----HHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HcCCc------hHHHHHHHHHHHHHHH
Confidence 00 000011111111 1111122222222222222211 00111 1223445555666666
Q ss_pred HHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHH-HhhhhccCCC---CCcccchhHHHHHHHHHH
Q 039271 411 ICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATE-IQRLKYISPG---EKASSLSIFWQIPQYVLV 486 (609)
Q Consensus 411 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~---g~~~~~~~~~~i~~~~l~ 486 (609)
+...+.+++. +|...+ ..+..+.++.++..+.+.+.. ....+...-. +-....+.+.+++.+++.
T Consensus 276 ig~~~~g~l~----~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1140)
T PRK06814 276 VGSFLASKLS----EGRITL-------LYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGL 344 (1140)
T ss_pred HHHHHHHHHh----CCceee-------eeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHH
Confidence 6666666653 222111 112333333333333222210 0000000000 000012445566777888
Q ss_pred HHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039271 487 GASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVM 536 (609)
Q Consensus 487 g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~ 536 (609)
|++.+...++..+++.+.+|++.+|+++|+.++.+.++..+++++.+.+.
T Consensus 345 g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 345 AAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888765
No 79
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.5e-19 Score=194.69 Aligned_cols=377 Identities=12% Similarity=0.104 Sum_probs=245.5
Q ss_pred hhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcc
Q 039271 86 VLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSS 165 (609)
Q Consensus 86 ~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (609)
++..+..+-+++.+.+..++.++++++|+++||+ |-|+++.++.++.+++.++...+..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 5778889999999999999999999999999996 9999999999999999988887731
Q ss_pred hhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccc-cchhHHHH
Q 039271 166 IFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDS-GKWTLGFL 244 (609)
Q Consensus 166 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~-~g~~~~f~ 244 (609)
.+.+.+++.|+++|++.|...|+...+.+.+.|+++ |++..++.+.+..+|.+++..++|++.+. .||+++|+
T Consensus 126 ~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY 199 (466)
T KOG2532|consen 126 IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFY 199 (466)
T ss_pred hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHH
Confidence 234577999999999999999999999999999999 99999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHH
Q 039271 245 VSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFL 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (609)
+.++..++-.++++......+.++|.- +++++...++....++...
T Consensus 200 ~~g~~g~i~~~~w~~~~~d~P~~h~~i-----------------------s~~El~~I~~~k~~~~~~~----------- 245 (466)
T KOG2532|consen 200 VFGIVGLIWFILWFLFYSDSPSKHPNI-----------------------SEKELKYIEKGKSEAHVKK----------- 245 (466)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCCCC-----------------------CHHHHHHHHhcccccccCC-----------
Confidence 998887776666554433222222211 0111111111000000000
Q ss_pred hhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccceeeEecccccccccccccCcccccch
Q 039271 325 DKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAF 404 (609)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (609)
....||+..-+ +...+...+..+.....++....+.++++.. ..+++ ...+++..++
T Consensus 246 ------------~~~vP~~~i~t----s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~-VL~f~------v~~~G~~sal 302 (466)
T KOG2532|consen 246 ------------KPPVPYKAILT----SPPVWAIWISAFGGNWGFYLLLTYLPTYLKE-VLGFD------VRETGFLSAL 302 (466)
T ss_pred ------------CCCCCHHHHHc----CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HhCCC------hhhhhHHHHH
Confidence 01345632111 0111111222233333444444455554432 12222 3356777888
Q ss_pred hHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHH--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHH
Q 039271 405 DICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRM--GIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQ 482 (609)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~ 482 (609)
..+...+...+.+.+.|++.+| .-.. ....++ .++....++.++.+++.. ..+. +..+.
T Consensus 303 P~l~~~~~k~~~g~lsD~l~~~-~ls~---t~~rkifn~i~~~~~ai~l~~l~~~~--------------~~~~-~~a~~ 363 (466)
T KOG2532|consen 303 PFLAMAIVKFVAGQLSDRLTFR-ILSE---TTVRKIFNTIAFGGPAVFLLVLAFTS--------------DEHR-LLAVI 363 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-cCch---HhHHHHHHhHHHHHHHHHHHeeeecC--------------CCcc-hHHHH
Confidence 8888888888888877777665 2211 122233 455666666666666642 1122 22222
Q ss_pred HHHHHHHHHh-hhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHH
Q 039271 483 YVLVGASEVF-MYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFY 561 (609)
Q Consensus 483 ~~l~g~g~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f 561 (609)
++..+++... ..++.+.-..+.+| ++-+..+|+.|+...++++++|.+++.+.. . + +...+...|
T Consensus 364 ~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~-----------~-t~~eW~~VF 429 (466)
T KOG2532|consen 364 LLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVT-D-----------N-TREEWRIVF 429 (466)
T ss_pred HHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C-----------C-CHHHHHHHH
Confidence 2223233222 22333222223344 669999999999999999999999986642 1 1 223456689
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 039271 562 FLLAVLTAFDFVIYLICA 579 (609)
Q Consensus 562 ~~~a~~~~v~~v~~~~~~ 579 (609)
++.+++.+++.++|.++.
T Consensus 430 ~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 430 LIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHhchheeEee
Confidence 999999999988877665
No 80
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.84 E-value=2.3e-19 Score=189.18 Aligned_cols=159 Identities=14% Similarity=0.096 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
..+..++..+......+...+++|.|+++++|.+..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 345566666777777777778888789999999999999999999999999999999999996 9999999999999998
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcch-hHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSI-FAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
.+++.+. . +.+.+++.|++.|++.+. .+...++++|++|+++ |++..+++
T Consensus 81 ~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~~~~~~ 131 (366)
T TIGR00886 81 CLWAGLA----------------------VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGTALGLA 131 (366)
T ss_pred HHHHHHH----------------------hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhHHHHHH
Confidence 8888776 5 688899999999998665 4567889999999888 99999998
Q ss_pred HHHHhhhHHHHhhhhhhccc----------ccchhHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYED----------SGKWTLGFLV 245 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~----------~~g~~~~f~~ 245 (609)
....++|..+++.+++.+.. ..+|++.|++
T Consensus 132 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 132 AGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 88888888888777765543 2489999844
No 81
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.84 E-value=2.2e-18 Score=184.55 Aligned_cols=178 Identities=11% Similarity=-0.015 Sum_probs=129.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHH-hhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTR-VLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
|.++...+.........+ ..+.+...+.+ ++|+|.++.+++.+++.+.+.++.++.|++.||+ |.|+++..+.++..
T Consensus 34 r~l~~s~~~f~~~F~~w~-~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWM-LFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 555555554444444444 33444455544 7999999999999999999999999999999996 99999999999888
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
+..++..+... + ..++++.+++.|++.|++ +...+.....++++||+++ ||++.|+
T Consensus 112 i~~~~~~~a~~-~----------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi 167 (462)
T PRK15034 112 IPCVWLGIAVQ-N----------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGI 167 (462)
T ss_pred HHHHHHHHHHc-c----------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHH
Confidence 88776665410 0 014688999999999998 6678889999999999998 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcc-----c-------------ccchhHHHHHHHHHHHHHHHHHHh
Q 039271 215 FYFFLNVGSLFSNTILVYYE-----D-------------SGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~-----~-------------~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+....|+|..+++.+.+.+. . ..+|+.++++..+..+++.+..++
T Consensus 168 ~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 168 NGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777776655554322 1 234676666666555555444444
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.84 E-value=5e-18 Score=180.74 Aligned_cols=336 Identities=10% Similarity=0.026 Sum_probs=203.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH----HHHHHHHHHHHHHHHH
Q 039271 65 QGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYL----TCAVFQLIFVVGLVLL 140 (609)
Q Consensus 65 ~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~----~~~~~~~~~~~~~~~~ 140 (609)
.++...++..+.+++|.|++ ++|.|..++|++.+++.+...++.++.|.++||+ |||+ .+.....+ .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~---~~~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLL---FAVAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHH---HHHHH
Confidence 34444555667788999985 5899999999999999999999999999999996 9843 22222111 11111
Q ss_pred HHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHh
Q 039271 141 SVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLN 220 (609)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 220 (609)
... .++.+.+++.|++.+++.+...|...++..++ .++ |++.++......+
T Consensus 88 ~~~---------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~~~~ 138 (382)
T PRK11128 88 WFG---------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRLWGS 138 (382)
T ss_pred HHh---------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHHHHH
Confidence 111 15588888999999999999999888887776 233 6677888888889
Q ss_pred hhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhh
Q 039271 221 VGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELY 300 (609)
Q Consensus 221 ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 300 (609)
+|..+||.+++++.+++|||..|++.++..++..+.... .++ .+|.+++.++ +
T Consensus 139 lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~----------------~------- 191 (382)
T PRK11128 139 IAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLL-RPT---IMPQGESRQQ----------------E------- 191 (382)
T ss_pred HHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHc-cCC---CCCccccccc----------------c-------
Confidence 999999999999999999999998877654444333322 221 1111100000 0
Q ss_pred hhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHH-HHHHHHHHHHHHhcccce
Q 039271 301 EVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLP-IWLCTIIYSVVFTQMASL 379 (609)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 379 (609)
.+...++. +..+.+.++.... .++....+...+...+.+
T Consensus 192 ----------------~~~~~~~~------------------------~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 231 (382)
T PRK11128 192 ----------------SAGWPAWK------------------------ALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIY 231 (382)
T ss_pred ----------------ccccchHH------------------------HHHcChhHHHHHHHHHHHHHHhHhHHHHHHHH
Confidence 00000000 0011112221111 111122221222222222
Q ss_pred eeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 039271 380 FVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEI 459 (609)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 459 (609)
.. + .+.+ ....+....++.+..++...+.+++ .+|++ ....+..++++.+++++.+...
T Consensus 232 ~~-~-~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l----~~r~~-------~~~~l~~~~~~~~~~~~~~~~~-- 290 (382)
T PRK11128 232 WQ-A-AGYS------ASTIGYLWSLGVVAEVLIFAFSNRL----FRRWS-------ARDLLLLSAICGVVRWGLMGST-- 290 (382)
T ss_pred HH-H-CCCC------HhHHHHHHHHHHHHHHHHHHHHHHH----HHHCC-------HHHHHHHHHHHHHHHHHHHHhh--
Confidence 11 1 1111 1112333344444445555555554 44432 3344667777777776666543
Q ss_pred hhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Q 039271 460 QRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCM-ASISFGNYVSSLLVVMVMG 537 (609)
Q Consensus 460 ~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~lg~~ig~~~~~~i~~ 537 (609)
.+.+.+++..++.+++++...+....++.+.. ++.+++++++.+ ....+|..+|+.+.|.+.+
T Consensus 291 --------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 291 --------------TALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24555666778899999988899888888874 455688899887 4466777899999998765
No 83
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.82 E-value=8e-24 Score=230.19 Aligned_cols=395 Identities=16% Similarity=0.165 Sum_probs=234.9
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHH
Q 039271 93 NAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFY 172 (609)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (609)
..++..+...++..++.+++|+++||+ |||+++..+.++..++.++..++ +. ..+.+.+.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~--~~-----------------~~~~~~~~ 106 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFA--PS-----------------YNNFWMLL 106 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccc--cc-----------------cccccccc
Confidence 467889999999999999999999996 99999999999999999888887 10 02688999
Q ss_pred HHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccc---cchhHHHHHHHHH
Q 039271 173 LSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDS---GKWTLGFLVSLAS 249 (609)
Q Consensus 173 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~---~g~~~~f~~~~~~ 249 (609)
++|++.|++.|+..+....++.|..|++. |+...++.+....+|..++..++..+.+. .+||..+.+.++.
T Consensus 107 ~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~ 180 (451)
T PF00083_consen 107 IGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIP 180 (451)
T ss_pred ccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998 99999999999999999888776554333 3499988888766
Q ss_pred HHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhhhcCCcccccCccccccCchhh-HHhhhh
Q 039271 250 AVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIE-FLDKAA 328 (609)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 328 (609)
.++.++.... .||+|+|+..+++.|++++..++.++.+..+ ..+...
T Consensus 181 ~l~~~~~~~~--------------------------------~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~ 228 (451)
T PF00083_consen 181 SLLVLLLRFF--------------------------------LPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIK 228 (451)
T ss_pred cccccccccc--------------------------------cccccceecccccccccccccccccccccccccccccc
Confidence 5544333222 7888899888888888887777754331111 001000
Q ss_pred cccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHH-HHHhcccceeeEecccccccccccccCcccccchhHH
Q 039271 329 TITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYS-VVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDIC 407 (609)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (609)
...++. ...+..|+.+...+. ..++++....+.......+ .....+.+.+.. ....+.. ...+........+
T Consensus 229 ~~~~~~-~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~~~~~~----~~~~~~~~~~~~~ 301 (451)
T PF00083_consen 229 AEKKES-QESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NAGISNS----FLATLILGLVNFL 301 (451)
T ss_pred cccccc-cccceeeeecccccc-cccccccccccccccccccccccccccccccc-ccccccc----ccccccccccccc
Confidence 000000 000112322111110 1122222111111111111 111111111111 1111110 0111111122222
Q ss_pred HHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHH-HHHHhhhhccCCCCCcccc--hhHHHHHHHH
Q 039271 408 SVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAG-ATEIQRLKYISPGEKASSL--SIFWQIPQYV 484 (609)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~--~~~~~i~~~~ 484 (609)
..++.. .+.+|++||+ .+..+.++++++++.++ ..... .... .-.+.+....
T Consensus 302 ~~~~~~--------~~~~~~GRr~-------~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~~ 356 (451)
T PF00083_consen 302 GTLLAI--------FLIDRFGRRK-------LLIIGLLLMAICSLILGIIFFLG----------VSSSSWWSILSIVFLA 356 (451)
T ss_pred cccccc--------cccccccccc-------ccccccccccccccccccccccc----------cccccccccccceeee
Confidence 222221 2244554443 25566666666655554 11000 0010 0111122222
Q ss_pred HHHHH-HHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHH
Q 039271 485 LVGAS-EVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFL 563 (609)
Q Consensus 485 l~g~g-~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 563 (609)
+.... .....+..+.+..|.+|.+.|+++.++....+.+++.+++.+...+.+.. +....+++
T Consensus 357 l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~----------------~~~~~~~i 420 (451)
T PF00083_consen 357 LFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL----------------GGWGVFLI 420 (451)
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------------cccccchh
Confidence 22222 22334555678889999999999999999999999888877665443211 11235678
Q ss_pred HHHHHHHHHHHHhhhccccccccCCchhhH
Q 039271 564 LAVLTAFDFVIYLICANWYKGINLDEDSCE 593 (609)
Q Consensus 564 ~a~~~~v~~v~~~~~~~~~~~~~~~~~~~~ 593 (609)
+++++++..++.+++.||+|+++++|.++.
T Consensus 421 ~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 421 FAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred hHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 888888888888999999999999987753
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.82 E-value=1.1e-17 Score=177.49 Aligned_cols=157 Identities=17% Similarity=0.188 Sum_probs=114.1
Q ss_pred HHHHHHHHhhC--CchhhhhHHHHHH-----HHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 039271 78 NLVLFLTRVLQ--QENANAANNVSKW-----TGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKP 150 (609)
Q Consensus 78 ~~~~yl~~~~g--~~~~~~~~~~~~~-----~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (609)
+...++.++.. .+.++.+.+.+.. .+...++.++.|+++||+ ||||++..+.++..++.+++.+. ++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~--~~~~- 89 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLL--PSYA- 89 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhC--CChh-
Confidence 34445555443 4445555554432 233346889999999996 99999999999988888877766 1100
Q ss_pred CCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhh
Q 039271 151 TGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTIL 230 (609)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~ 230 (609)
.........++++|+++|++.+...+...++++|.+|+++ |++..+..+.+..+|..+++.++
T Consensus 90 -----------~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 90 -----------TIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred -----------hhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHH
Confidence 0000112467889999999999999999999999999988 99999999999999999998877
Q ss_pred hhcc--------cccchhHHHHHHHHHHHHHHH
Q 039271 231 VYYE--------DSGKWTLGFLVSLASAVIALL 255 (609)
Q Consensus 231 ~~l~--------~~~g~~~~f~~~~~~~~~~~~ 255 (609)
+.+. +.++||+.|++.++..+++..
T Consensus 153 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 153 LLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 6543 357899999887766554443
No 85
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.81 E-value=1.7e-16 Score=170.07 Aligned_cols=167 Identities=13% Similarity=0.060 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc----cchhH-HHHHHHHHHHHH
Q 039271 62 LANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY----WGRYL-TCAVFQLIFVVG 136 (609)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~-~~~~~~~~~~~~ 136 (609)
+...+...+.+.....-+|.|+++ .|++.+++|++..+... .+..+++|+++||+ +|||| .+..+.++.+++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 445566666666677889999985 59999999998766665 69999999999994 17766 677777777666
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
...+.+. +. ..+.+.+++..++.++..+...++..+++.|++|+++ |+++.++..
T Consensus 82 ~~~l~~~--~~-----------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~ 136 (402)
T PRK11902 82 IAAMAFC--PP-----------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKV 136 (402)
T ss_pred HHHHHhc--Cc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHH
Confidence 6655554 11 1346667777677788888888999999999999988 999999999
Q ss_pred HHHhhhHHHHhhhhhhcccc-cchhHHHHHHHHHHHHHHHH
Q 039271 217 FFLNVGSLFSNTILVYYEDS-GKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~-~g~~~~f~~~~~~~~~~~~~ 256 (609)
.+.++|..+++.+++++.+. .|||..|++.++..++..+.
T Consensus 137 ~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 137 LGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988875 59999999988766555443
No 86
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.81 E-value=3.8e-17 Score=181.30 Aligned_cols=140 Identities=21% Similarity=0.169 Sum_probs=126.3
Q ss_pred HhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCc
Q 039271 85 RVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLS 164 (609)
Q Consensus 85 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (609)
+..+.+.....+..+++.++..+++++.|.++|| +|||++++++.++.+++.++.+++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a--------------------- 168 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFA--------------------- 168 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 4567788888999999999999999999999999 599999999999999999888888
Q ss_pred chhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHH
Q 039271 165 SIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFL 244 (609)
Q Consensus 165 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~ 244 (609)
.+++.+.+.|++.|++.++.......+++|++++++ |+.+.++ ......++.+++.+++++.. +||+.++
T Consensus 169 -~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~ 238 (521)
T KOG0255|consen 169 -PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFW 238 (521)
T ss_pred -CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 789999999999999999999999999999999999 9999988 77778888888888888887 8999999
Q ss_pred HHHHHHHHHHHH
Q 039271 245 VSLASAVIALLS 256 (609)
Q Consensus 245 ~~~~~~~~~~~~ 256 (609)
+..+..++.++.
T Consensus 239 ~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 239 IISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHH
Confidence 988777666555
No 87
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=5.8e-18 Score=178.23 Aligned_cols=325 Identities=12% Similarity=0.118 Sum_probs=203.2
Q ss_pred HHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 039271 77 VNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDG 156 (609)
Q Consensus 77 ~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (609)
+.+| .+.+++|.+..+++++.+.+.++..++.++.|+++||+ ||||++..+.++..++.+.. ..
T Consensus 21 ~~lp-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~------------- 84 (355)
T TIGR00896 21 PLLP-QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA------------- 84 (355)
T ss_pred ccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh-------------
Confidence 4444 56778999999999999999999999999999999996 99999999988777766655 33
Q ss_pred CCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccc
Q 039271 157 FISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDS 236 (609)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~ 236 (609)
.+.+.+++.|++.|++.+...+....++.|.+| ++ |++..++++...++|..+++.+++.+.+.
T Consensus 85 ---------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 85 ---------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456778899999999999888888888888886 45 88999999999999999999999888765
Q ss_pred c--chhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhhhcCCcccccCccc
Q 039271 237 G--KWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYEVAGPESAIKGSRK 314 (609)
Q Consensus 237 ~--g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~ 314 (609)
. +||+.|.+.++..++....+. ++.++++++.++. . +
T Consensus 149 ~~~~w~~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------------------~--------------~---- 187 (355)
T TIGR00896 149 SGGHWQQALAWWALPALLALLAWI---PQVRRRVAANQTT--------------------T--------------R---- 187 (355)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHh---hhhccccCCCCCC--------------------C--------------C----
Confidence 4 389888776654443322221 1111100000000 0 0
Q ss_pred cccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHH-HHHHHHHHHHHHHhcccceeeEecccccccccc
Q 039271 315 ILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKML-PIWLCTIIYSVVFTQMASLFVEQGDVMNSHIGE 393 (609)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (609)
..+++.+ ++ +..+... ...+....++....+.+.++.. .+.+
T Consensus 188 ------------------------~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~g~~----- 230 (355)
T TIGR00896 188 ------------------------LTPVRIW-----RS-PLAWQVTVFFGLQSGLYYSLIGWLPAILIS--HGAS----- 230 (355)
T ss_pred ------------------------CCCchhh-----cC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCC-----
Confidence 0000000 01 1111111 1111122222222222222211 1111
Q ss_pred cccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCccc
Q 039271 394 FRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASS 473 (609)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 473 (609)
....+.......+..++...+.+++. +|+.++ +..+.++.++.+++++.+.+.. .
T Consensus 231 -~~~~g~~~~~~~~~~i~~~~~~g~l~----dr~~~~------~~~~~~~~~~~~~~~~~~~~~~--------------~ 285 (355)
T TIGR00896 231 -AATAGSLLALMQLAQAASALLIPALA----RRVKDQ------RGIVAVLAVLQLVGLCGLLFAP--------------M 285 (355)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhHHHHH----hhhccc------hHHHHHHHHHHHHHHHHHHHhh--------------h
Confidence 11233445555556666666666654 343211 1234566666666666555431 1
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 039271 474 LSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAP-DGIKSFGSSLCMASISFGNYVSSLLVVMVMGIT 539 (609)
Q Consensus 474 ~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~ 539 (609)
+..+. ..++.|++.+..+|...+.+.+..+ ++.++..+++.+....+++.+++.+.+.+.+.+
T Consensus 286 -~~~~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 286 -HGLWA--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred -hHHHH--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11121 3456788888888887777665554 577899999999888999999999999887543
No 88
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.81 E-value=1.3e-16 Score=171.93 Aligned_cols=439 Identities=13% Similarity=0.055 Sum_probs=243.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhh----hccchhHHHHHHH-H
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSD----SYWGRYLTCAVFQ-L 131 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~~~~~~~-~ 131 (609)
+++.+....+...+++-...++++.|+ +++|.+...++++..+..+...+.+|+.|+++| |+ ||||.++++. +
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHH
Confidence 456666667777777777778888876 579999999999999999999999999999999 55 9999998764 4
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
..+++.+++..+...... ..+ ...+.......+.+.++..+..++....+++..++++|++|+++++ ++.+
T Consensus 83 ~~~~~l~ll~~~~~~~~~---~~~--~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~~a 153 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHL---FGD--NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TRIA 153 (477)
T ss_pred HHHHHHHHHHhCchhhhh---ccc--cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HHHH
Confidence 444444554443110000 000 0000000011233444555566788888888999999999987632 3578
Q ss_pred HHHHHHHHhhhHHHHhhhhhhc--ccc-------------cchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhH
Q 039271 212 FCYFYFFLNVGSLFSNTILVYY--EDS-------------GKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPR 276 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l--~~~-------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (609)
.++.+...++|+.+|+.++++. .+. .+.++.|++.+++.++..+...+..++.+..++++ .+
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~--~~- 230 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDD--FI- 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcccc--ch-
Confidence 9999999999999999988764 111 15688999988777766665544333321111000 00
Q ss_pred HHHHHHHHHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHH-HH
Q 039271 277 VAQVFIAAARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEA-KC 355 (609)
Q Consensus 277 ~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 355 (609)
+ . +.++.++ +..+..+.+.- + ...+. +.
T Consensus 231 -----------------~--~---~~~~~~~---------~~~~~~~~~i~---------------~-----~~~~mP~~ 259 (477)
T TIGR01301 231 -----------------N--S---EAAPPSK---------HGEEAFFGELF---------------G-----AFKYLPRP 259 (477)
T ss_pred -----------------h--h---hcccccc---------cchhhhHHHHH---------------H-----HHHHCCHH
Confidence 0 0 0000000 00000000000 0 00000 11
Q ss_pred HHhHHHHHHHHHHHHHHHhcccceeeEecccccccccccccC-----cccccchhHHHHHHHHHhhhhhhhhccccccCC
Q 039271 356 VLKMLPIWLCTIIYSVVFTQMASLFVEQGDVMNSHIGEFRLP-----AASMSAFDICSVLICTGIYRKILVPVAGKLNGN 430 (609)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 430 (609)
+.+...+.++.-+-|..+..+.|.+.-+..+-...-..-... ..+...++.+...+...+..+ +.||++++
T Consensus 260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~----l~~~~g~~ 335 (477)
T TIGR01301 260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEK----LCRGWGAG 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhccc
Confidence 122222333333333333333333222111100000000111 112233333333344444444 34554321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCC---cccch-hHHHHHHHHHHHHHHHhhhhhhHHHhhhcC
Q 039271 431 PKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKY-ISPGEK---ASSLS-IFWQIPQYVLVGASEVFMYVGQLEFFNGQA 505 (609)
Q Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~g~---~~~~~-~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~ 505 (609)
+ ..-.++.++.+++++...+......|. ..++.| +.... .+..+..+.+.|+........-++++.+..
T Consensus 336 k------~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~ 409 (477)
T TIGR01301 336 K------RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRS 409 (477)
T ss_pred h------hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHc
Confidence 1 123677778888877776654321110 000000 00111 245556667788877777777778888888
Q ss_pred Cc--chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccccc
Q 039271 506 PD--GIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYK 583 (609)
Q Consensus 506 p~--~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~ 583 (609)
|+ +-.|..+|+.|....+...+.+...+.+.+..++. ..+.+.+.++.++++++..++..|+.+
T Consensus 410 ~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~--------------~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 410 SNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGG--------------NLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred cccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCC--------------CeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 84 45599999999999999999988888755443222 123567778888888888888887754
Q ss_pred c
Q 039271 584 G 584 (609)
Q Consensus 584 ~ 584 (609)
+
T Consensus 476 ~ 476 (477)
T TIGR01301 476 V 476 (477)
T ss_pred C
Confidence 3
No 89
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.80 E-value=1.7e-16 Score=170.39 Aligned_cols=172 Identities=13% Similarity=0.099 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
+..++...+...+.. ++...+.+.+++++|.+..+.+++.+.+.++..++.++.|++.||+ |||+++..+.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 444444445455444 3443444566889999999999999999999999999999999996 99999999999999888
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
+++..+. ...+++.+++.|++.|+|.+...+...+++.+..|+++ |++..++.+.
T Consensus 83 ~l~~~~~-------------------~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 137 (410)
T TIGR00885 83 FLFWPAA-------------------EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQS 137 (410)
T ss_pred HHHHHHH-------------------hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHH
Confidence 7755431 01457889999999999999999999999999988877 7788899999
Q ss_pred HHhhhHHHHhhhhhhcccc--------------------------cchhHHHHHHHHHHHHHHHH
Q 039271 218 FLNVGSLFSNTILVYYEDS--------------------------GKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 218 ~~~ig~~~~~~i~~~l~~~--------------------------~g~~~~f~~~~~~~~~~~~~ 256 (609)
..++|..++|.+++.+... .+||++|++.++..++..++
T Consensus 138 ~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 138 FNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998866321 36999998877655544433
No 90
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.80 E-value=1.6e-17 Score=170.27 Aligned_cols=182 Identities=11% Similarity=-0.019 Sum_probs=147.2
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
++|.++...+. +..++..+.+...+.+++.+++|+|+.|.++++.+..+...+..++-|++.||+ |.|++..++.++.
T Consensus 12 ~~~~L~~S~~a-f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLWLSTLA-FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLL 89 (417)
T ss_pred hhHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHH
Confidence 45555544443 444445555666777788899999999999999999999999999999999995 9999999999998
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
++-++..+++.. ..+.+.+++...+.|++.+ ..+...++++.+||+++ +|.+.|
T Consensus 90 ~IP~~~~~~a~~-------------------~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~------qG~AlG 143 (417)
T COG2223 90 LIPCLGLAFAVT-------------------YPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEK------QGLALG 143 (417)
T ss_pred HHHHHHHHHHcc-------------------CCchHHHHHHHHHHhcccc-eehcccccccccCChhh------hhHHHH
Confidence 888888887721 1334788888888887644 45677899999999999 899999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccc---hhHHHHHHHHHHHHHHHHHHhcCCcc
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGK---WTLGFLVSLASAVIALLSYLMGTPGY 264 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~ 264 (609)
++. ..|+|..+...+++++....| |+....+..+..+++.+.+++..+..
T Consensus 144 I~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 144 IAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred Hhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999 999999999999999988888 88888888877777777666655443
No 91
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.79 E-value=1.1e-16 Score=168.56 Aligned_cols=153 Identities=16% Similarity=0.142 Sum_probs=115.9
Q ss_pred HHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc----cchhHHH-HHHHHHHHHHHHHHHHHhhhccCCCC
Q 039271 78 NLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY----WGRYLTC-AVFQLIFVVGLVLLSVLSFLMIKPTG 152 (609)
Q Consensus 78 ~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (609)
.++. +.+++|.|.++.++.... .+...+ .++.|.++||+ +||||.+ +.+.++..+..+.+.+. +.
T Consensus 10 ~~~~-~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~--~~----- 79 (356)
T TIGR00901 10 TLPY-WLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL--VP----- 79 (356)
T ss_pred HHHH-HHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC--Cc-----
Confidence 4444 455789999999988655 444444 89999999995 3899975 55555555554444433 11
Q ss_pred CCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhh
Q 039271 153 CGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVY 232 (609)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~ 232 (609)
..+.+.+....++.+++.+...++..+++.|++|+++ |+++.++...+.++|.++++.++++
T Consensus 80 ------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 80 ------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1345566666667788888888999999999999888 9999999999999999999999998
Q ss_pred cccccc--------hhHHHHHHHHHHHHHHHHHH
Q 039271 233 YEDSGK--------WTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 233 l~~~~g--------~~~~f~~~~~~~~~~~~~~~ 258 (609)
+....| ||..|++.++..+++.+..+
T Consensus 142 l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 142 LASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 888777 99999998887666555444
No 92
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=1e-15 Score=166.52 Aligned_cols=362 Identities=11% Similarity=0.072 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhHHH-HHHHHHHHHH
Q 039271 61 LLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY---WGRYLTC-AVFQLIFVVG 136 (609)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~-~~~~~~~~~~ 136 (609)
-.+..+..++.+....++++.|+++.+|++..++|.+.....+...+..++.|+++||. +||||.. .++.+...+.
T Consensus 13 yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 13 YSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred hccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 33455666777777778888999999999999999999999999999999999999993 3777755 5555444444
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
..++... |.. . .........++...+.+++.+...++..++..++..+.++ |.+..++..
T Consensus 93 ~~~~~~~--~~~----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----r~~~~~~r~ 152 (448)
T PRK09848 93 SVLVFWV--PTD----W---------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS-----RARLGAARG 152 (448)
T ss_pred HHHHHhC--cCC----C---------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----HHHHHHHHH
Confidence 4333211 110 0 0001233344445567888888888888887877665332 555555544
Q ss_pred HH-----HhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccc
Q 039271 217 FF-----LNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVV 291 (609)
Q Consensus 217 ~~-----~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (609)
++ .+++..++|.+.+.........+..+. .++.+++.++.+......+++.+.+.+...
T Consensus 153 ~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~--------------- 216 (448)
T PRK09848 153 IAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMVLYFICFKSTRENVVRIVAQPS--------------- 216 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHHHHHHHHcCcEeccCCCccCCC---------------
Confidence 33 445666677776644322111111111 122222222222111111111110000000
Q ss_pred cCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHH
Q 039271 292 VPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSV 371 (609)
Q Consensus 292 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (609)
..+. ++ .+...|.+.............+.
T Consensus 217 -------------------------------~~~~---------------~~-----~l~~n~~f~~~~~~~~~~~~~~~ 245 (448)
T PRK09848 217 -------------------------------LKIS---------------LQ-----TLKRNRPLFMLCIGALCVLISTF 245 (448)
T ss_pred -------------------------------HHHH---------------HH-----HHhCCchHHHHHHHHHHHHHHHH
Confidence 0000 00 00001111111111111111111
Q ss_pred HHhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHH
Q 039271 372 VFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAM 451 (609)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~ 451 (609)
.+....+++.....+.+ ............+..++..++..++ .+|++ ....+.+|.++..+++
T Consensus 246 ~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~l~~~l----~~r~g-------~~~~~~~g~~~~~i~~ 308 (448)
T PRK09848 246 AVSASSLFYVRYVLNDT------GLFTVLVLVQNLVGTVASAPLVPGM----VARIG-------KKNTFLIGALLGTCGY 308 (448)
T ss_pred HHhhhheeeEeeecCCh------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHhC-------cHHHHHHHHHHHHHHH
Confidence 22222223322211111 1111111112233344455555554 44443 2234667777777776
Q ss_pred HHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcc-------hhHHHHHHHHHHHHHH
Q 039271 452 IAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDG-------IKSFGSSLCMASISFG 524 (609)
Q Consensus 452 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~-------~r~~~~g~~~~~~~lg 524 (609)
+.+.+. ...+.++++...++.++|++...+..+++..+..|.+ .+|.++|++++.+.+|
T Consensus 309 ~~~~~~--------------~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 309 LLFFWV--------------SVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred HHHHHc--------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 665542 1234555666677889999999999999988888754 4699999999999999
Q ss_pred HHHHHHHHHHhhhhcc
Q 039271 525 NYVSSLLVVMVMGITA 540 (609)
Q Consensus 525 ~~ig~~~~~~i~~~~~ 540 (609)
..+|+.+.+.+.+..+
T Consensus 375 ~aig~~i~g~~l~~~G 390 (448)
T PRK09848 375 QAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999998876653
No 93
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.78 E-value=9e-16 Score=168.13 Aligned_cols=364 Identities=12% Similarity=0.059 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhh----hccch-hHHHHHHHHHHHHHH
Q 039271 63 ANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSD----SYWGR-YLTCAVFQLIFVVGL 137 (609)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Gr-r~~~~~~~~~~~~~~ 137 (609)
+..+..++.+..+.++++.|+++.+|++...+|.+..+.-+.-++..|+.|+++| | +|| |+-++++.+...++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHH
Confidence 4456667777778899999999999999999999999999999999999999999 6 498 455556666656655
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCC-CCChhhhhccchhHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFD-ESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~~ 216 (609)
.++... |... .......+++..++.+++......+..++.+|+.+ +++ |.+..++..
T Consensus 92 ~llf~~--p~~~--------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~~l~~~~~ 149 (473)
T PRK10429 92 FLLFSA--HLFE--------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------REQLVPYPR 149 (473)
T ss_pred HHHHcC--CCCC--------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HHHHHHHHH
Confidence 444322 2110 01123344455556678888888888999999985 444 888888877
Q ss_pred HHHhhhHHHHhhhhhhccc-------ccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcc
Q 039271 217 FFLNVGSLFSNTILVYYED-------SGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWN 289 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
...++|+.+.+.+...+.. ..+|+....+.++..++..+..+...++.. +++..++..
T Consensus 150 ~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~-------------- 214 (473)
T PRK10429 150 FFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY-SSDNQVSAE-------------- 214 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC-Ccccccccc--------------
Confidence 7777776666555433211 124665555555544443333333222110 000000000
Q ss_pred cccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHH
Q 039271 290 VVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIY 369 (609)
Q Consensus 290 ~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (609)
.++.++.+... .+...|.++..+...+.....
T Consensus 215 ----------------------------~~~~~~~~~~~--------------------~~~~n~~~~~ll~~~~~~~~~ 246 (473)
T PRK10429 215 ----------------------------GSHLTLKDIVA--------------------LIYKNDQLSCLLGMALAYNIA 246 (473)
T ss_pred ----------------------------ccCCCHHHHHH--------------------HHhcCHHHHHHHHHHHHHHHH
Confidence 00000000000 000112222222221111122
Q ss_pred HHHHhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHH
Q 039271 370 SVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGML 449 (609)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~ 449 (609)
.........++.... ... ......+..+..+..++..++..++ .+|+++| ..+.++.++..+
T Consensus 247 ~~~~~~~~~y~~~y~--~~~-----~~~~~~~~~~~~i~~ii~~~~~~~l----~~r~gkk-------~~~~~~~~~~~~ 308 (473)
T PRK10429 247 SNIINGFAIYYFTYV--IGD-----ADLFPYYLSYAGAANLVTLILFPRL----VKSLSRR-------ILWAGASIFPVL 308 (473)
T ss_pred HHHHhhheeeEEEEE--CCC-----HHHHHHHHHHHHHHHHHHHHHHHHH----HHHcCcH-------HHHHHHHHHHHH
Confidence 222222222332221 111 0111223334445555566666554 4554433 234455555444
Q ss_pred HHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCC-------cchhHHHHHHHHHHHH
Q 039271 450 AMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAP-------DGIKSFGSSLCMASIS 522 (609)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~ 522 (609)
+.+.+..... ....+.+.+++..++.+++.+...+...+++.|..+ .+..|...|.+.+..-
T Consensus 309 ~~~~~~~~~~-----------~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K 377 (473)
T PRK10429 309 SCGVLLLMGL-----------AAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVK 377 (473)
T ss_pred HHHHHHHHhc-----------cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHH
Confidence 4443322100 012234445556677888888888888888888865 4557779999999999
Q ss_pred HHHHHHHHHHHHhhhhccc
Q 039271 523 FGNYVSSLLVVMVMGITAK 541 (609)
Q Consensus 523 lg~~ig~~~~~~i~~~~~~ 541 (609)
++..+++.+.+.+.+..+.
T Consensus 378 ~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 378 GGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999999988876543
No 94
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.76 E-value=2.7e-15 Score=159.58 Aligned_cols=381 Identities=12% Similarity=0.095 Sum_probs=211.9
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 039271 66 GLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSF 145 (609)
Q Consensus 66 ~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 145 (609)
++..+.+-...++++.|+++ .|+|..++|.+.++..+...+.+++.|.++||+..+||.+.+..++..+...+....
T Consensus 12 f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~-- 88 (400)
T PF03825_consen 12 FLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS-- 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh--
Confidence 33333444455889999985 789999999999999999999999999999996346777766555544444333332
Q ss_pred hccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHH
Q 039271 146 LMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLF 225 (609)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 225 (609)
.+++.++...++..+......|...++..+...++ +.-+|-.....++|-++
T Consensus 89 --------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~--------~~~YG~iRlwGSiGf~~ 140 (400)
T PF03825_consen 89 --------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDR--------GKDYGRIRLWGSIGFIV 140 (400)
T ss_pred --------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccc--------cCCCCcchhhhhHHHHH
Confidence 44666666666777777777787777777765532 22344445555566555
Q ss_pred Hhhh-hhhccccc---chhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhh
Q 039271 226 SNTI-LVYYEDSG---KWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYE 301 (609)
Q Consensus 226 ~~~i-~~~l~~~~---g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~ 301 (609)
+... ++++.... +....+++.++..++.....+. .|+.+.++..++..++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~~~~~~------------------------- 194 (400)
T PF03825_consen 141 AALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAKESVKK------------------------- 194 (400)
T ss_pred HHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccCCCccc-------------------------
Confidence 5332 22222222 2234555554433322222222 2221110000000000
Q ss_pred hcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccceee
Q 039271 302 VAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASLFV 381 (609)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (609)
. ...+. |+. .++.+.+...+..++........+.....++.
T Consensus 195 ----------------~---~~~~~---------------~~l-----lk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~ 235 (400)
T PF03825_consen 195 ----------------L---LGLDA---------------LKL-----LKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQ 235 (400)
T ss_pred ----------------c---cchHH---------------HHH-----hcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 000 00011111112222222222223222222222
Q ss_pred EecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 039271 382 EQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQR 461 (609)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 461 (609)
..+. .. ....+...++..+.=+.+....+++ .+|++ ..+.+.++.+..++-..++.+...
T Consensus 236 ~~gg-~~------~~~~g~~~~l~~~aEi~~f~~~~~~----~~r~g-------~~~ll~~a~~~~~vR~~l~a~~~~-- 295 (400)
T PF03825_consen 236 ELGG-YS------GSTIGILWALGVVAEIPFFFFSGRF----LKRFG-------IKWLLLLALVAYAVRWLLYAYFSD-- 295 (400)
T ss_pred Hccc-ch------hhHHHHHHHHHHHHHHHHHHHHHHH----HHhcC-------HHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 2110 00 1111222333333333333344443 44532 567788999999999888887520
Q ss_pred hhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcc
Q 039271 462 LKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMAS-ISFGNYVSSLLVVMVMGITA 540 (609)
Q Consensus 462 ~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~lg~~ig~~~~~~i~~~~~ 540 (609)
+.......++....++|+..++...+...++.+.+|++.|++++++++.. .++|+.+|..+.|++.+..+
T Consensus 296 ---------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 296 ---------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred ---------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 00111122344456899999999999999999999999999999999865 67999999999998876432
Q ss_pred cCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccc
Q 039271 541 KGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANW 581 (609)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~ 581 (609)
... ...+..++.+.+++.++..++++++.|+
T Consensus 367 ~~~----------~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 367 ARG----------MFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred chh----------hhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 211 1123345667777777777777777654
No 95
>PRK09669 putative symporter YagG; Provisional
Probab=99.75 E-value=3.4e-15 Score=162.29 Aligned_cols=173 Identities=13% Similarity=0.085 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhH-HHHHHHHHHHHHHH
Q 039271 63 ANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY---WGRYL-TCAVFQLIFVVGLV 138 (609)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~~~~~ 138 (609)
+..+..+..+..+..+++.|+++++|++...+|.+..+..+.-++..|+.|+++||. +|||| .++++.+...+..+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 344566666667778999999999999999999999999999999999999999993 37755 45566666655554
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
++... |... .......+++..++.+.+......+..++.+|+.++.++ |++..++....
T Consensus 96 l~f~~--p~~~--------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e-----R~~l~~~r~~~ 154 (444)
T PRK09669 96 LTFYT--PDFG--------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE-----RHSLQSWRFAL 154 (444)
T ss_pred HHHhC--CCCC--------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH-----HHHHHHHHHHH
Confidence 43332 3211 012344555555566767777777788999998854322 77788888888
Q ss_pred HhhhHHHHhhhhhhccc-------ccchhHHHHHHHHHHHHHHHH
Q 039271 219 LNVGSLFSNTILVYYED-------SGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~-------~~g~~~~f~~~~~~~~~~~~~ 256 (609)
.++|+.+++.+...+.. ..+|+..+.+.+++.++..+.
T Consensus 155 ~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 155 SFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88887777654433221 246777776666555444433
No 96
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=4.5e-16 Score=169.78 Aligned_cols=427 Identities=16% Similarity=0.084 Sum_probs=249.7
Q ss_pred HHHHHHHHHHHHHHHhhH---HHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 59 SILLANQGLATLAFFGVG---VNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~---~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|+++++.++.++..+++. ..+-..+.++++.+..+++|+.++...+..+..|+.+.+.||+ |.|++.+.|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 556666666666666544 2344567788999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHH-HHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYL-IAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
|.++..++ .+.+.+++...+ .|+|.++.......++..+|++ + |+.+.|+
T Consensus 124 g~~lssF~----------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-k------R~lA~Gi 174 (509)
T KOG2504|consen 124 GLLLSSFA----------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-K------RALATGI 174 (509)
T ss_pred HHHHHHHH----------------------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-H------HHHHHhh
Confidence 99999998 667777777665 6899999998888888877764 3 8888988
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCC
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPA 294 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 294 (609)
-..+..+|..+=|.+..++.+.+|||+.+++.+.+.+-.+......+|.....++. ..++... .....+.
T Consensus 175 a~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~~--------~~~~~~~ 244 (509)
T KOG2504|consen 175 AVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDLRN--------SAASVES 244 (509)
T ss_pred hhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhhcc--------ccccccc
Confidence 88888899999899999999999999999988877766666666666543333222 0000000 0000000
Q ss_pred CchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCC-CCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHH
Q 039271 295 NSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDL-AGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVF 373 (609)
Q Consensus 295 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (609)
.+... +....++ .....+..........+.. ++.. ...+.....+..+...+...+...+...+....+...+
T Consensus 245 ~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~ 318 (509)
T KOG2504|consen 245 TPKPV-ELRISER-DSGLKKLSLSNLATLKRGP----DKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPF 318 (509)
T ss_pred ccccc-ccccccC-CCCCCcccccchhhhhhCC----ccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000 0000000000000000000 0000 00000000000111111111111111111111122221
Q ss_pred hcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHH
Q 039271 374 TQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIA 453 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (609)
...+.+.. ..+.+ .........+..+..++.-++.+.+.|... ++......++++..+++.++
T Consensus 319 ~~l~~~~~--~~g~~------~~~aa~l~Siigi~~i~gRi~~G~laD~~~---------~~~~~~~~~~ll~~gl~~~~ 381 (509)
T KOG2504|consen 319 VYLPSYAK--SLGLS------SNDAAFLLSIIGVSDIIGRIILGLLADKPG---------IRALVLFLLTLLIAGLARLF 381 (509)
T ss_pred HHHHHHHh--hcCCC------hhhhHHHHHHHHHhhhhhhhhhhhhcCccc---------cchHHHHHHHHHHHHHHHHH
Confidence 11111111 11111 222333333434444444444333322111 12455677777777777755
Q ss_pred HHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039271 454 AGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVV 533 (609)
Q Consensus 454 ~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~ 533 (609)
.... .+.+.++....++|+..+....-....+.+..+.+.-+.+.|+....++++..+|+.+.+
T Consensus 382 ~p~~----------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 382 LPFA----------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHh----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 5543 244556666677777777777666678889999999999999999999999999999988
Q ss_pred HhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhc
Q 039271 534 MVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICA 579 (609)
Q Consensus 534 ~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~ 579 (609)
.+.+.+ +.|...|++.+++.+++.++.++..
T Consensus 446 ~~~d~t---------------g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 446 LLYDIT---------------GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeecc---------------CCeeeehhhcChHHHHHHHHHHHhH
Confidence 665433 2244457777888777776665544
No 97
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.73 E-value=1.4e-15 Score=160.29 Aligned_cols=158 Identities=12% Similarity=0.002 Sum_probs=136.9
Q ss_pred HhhHHHHHHHHHHhhCCchhh-hhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 039271 73 FGVGVNLVLFLTRVLQQENAN-AANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPT 151 (609)
Q Consensus 73 ~~~~~~~~~yl~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (609)
=...++...|+.+++|++..+ .|.+.++++.++.++.+++|+++||+ |-|+++.++.+...+..+++.+.
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa-------- 112 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLG-------- 112 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHH--------
Confidence 344577788999999999999 99999999999999999999999995 99999999999999999988887
Q ss_pred CCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhh
Q 039271 152 GCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILV 231 (609)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~ 231 (609)
.++..+.+.|++.|++.|... +...++..++|+++ |+++.++...+.++|.++++.+++
T Consensus 113 --------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 113 --------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999 99999999999988 999999999999999999999999
Q ss_pred hcccccchhHHHH---HHHHHHHHHHHHHHhcC
Q 039271 232 YYEDSGKWTLGFL---VSLASAVIALLSYLMGT 261 (609)
Q Consensus 232 ~l~~~~g~~~~f~---~~~~~~~~~~~~~~~~~ 261 (609)
+ ...+||++-+. +......+++++.++.+
T Consensus 172 l-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 172 L-LVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred H-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 45688886443 44444555555544443
No 98
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.73 E-value=9.8e-15 Score=155.83 Aligned_cols=178 Identities=11% Similarity=-0.117 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHH--HHHHHHHHHHHHhHH-HHHhhhccchhHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANN--VSKWTGTVYMCSLIG-AFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~-G~laDr~~Grr~~~~~~~~~~~ 134 (609)
+..+....+.+.+.+....+.+|.|++ +.|.+..++|.. ...+.+...+..|+. ++++||+ ||||..++...+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 445566777788887888899999887 569999999996 466788887888887 5579995 99999766653322
Q ss_pred H-HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 135 V-GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 135 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
. ....+... .+. ......++....+.++..+...+...++..|..++++ ++...+
T Consensus 81 ~~~~~~~~~~-~~~-----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~ 136 (390)
T TIGR02718 81 SACLASLALV-GPD-----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNA 136 (390)
T ss_pred HHHHHHHHcC-Ccc-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHH
Confidence 2 12222211 011 0112223333344455555566666666667665554 666677
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcC
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGT 261 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 261 (609)
....+..+|..+|+.+.+++.+..||+..|++.++..++..+..+..+
T Consensus 137 ~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 137 VQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 777788899999998888999989999999998877766555544433
No 99
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.72 E-value=1.5e-14 Score=157.93 Aligned_cols=382 Identities=12% Similarity=0.052 Sum_probs=217.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccc-----hhHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWG-----RYLTCAVFQL 131 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~~~~~~~ 131 (609)
.+.++....+..++. +.+...++.++.+++|++.++++...+...+...+-.+ +|.++||+ + ||+.++++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHH
Confidence 344455567778887 77777888899999999999999988888888888666 99999996 7 6777777665
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
+.. ...+..+. .+ ........+.+++.+++.+....+.-++..|..+ ++++ .++..
T Consensus 104 l~~-~~~~~~l~-~~------------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~~~ 159 (468)
T TIGR00788 104 LGS-AILYGLLP-GK------------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGPSL 159 (468)
T ss_pred HHH-HHHHHhcc-cc------------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCCCe
Confidence 542 11111121 00 1223334446778889999988999999999998 4321 13445
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccc
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVV 291 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (609)
.++.+...++|..+|+.++|.+.+.++|+..|++.++..++..+...+.+++.+...|....... ..+..
T Consensus 160 ~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~-----~~~~~----- 229 (468)
T TIGR00788 160 VSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLE-----MNMAL----- 229 (468)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccch-----hhhhh-----
Confidence 56666777899999999999999989999999998877766644444433321011111000000 00000
Q ss_pred cCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHH
Q 039271 292 VPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSV 371 (609)
Q Consensus 292 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (609)
..........+.. +.-|+ ....+.+...+.+ ..+.+.
T Consensus 230 -----------------------~~~~~~~~~~~~~-----------~~l~~------~l~~~~i~~~l~f---ifl~~~ 266 (468)
T TIGR00788 230 -----------------------LTLGVLANVKVQI-----------LGLRG------AIQLLEIAKPLIF---IFLSYA 266 (468)
T ss_pred -----------------------hhhhHHHHHHHHH-----------HHHHH------HHhcHHHHHHHHH---HHHHHh
Confidence 0000000000000 00000 0000111111111 111011
Q ss_pred HHhcccce-eeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHH
Q 039271 372 VFTQMASL-FVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLA 450 (609)
Q Consensus 372 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~ 450 (609)
........ +..+..... ......+.......+..++...+.++. .+|+ +.+..+.++.++.+++
T Consensus 267 ~~~~~~~~~f~~~~~~lG----~s~~~~G~~~~~~~v~~i~g~~~~~~~----~~~~-------~~r~~l~~~~~l~~~~ 331 (468)
T TIGR00788 267 NLPGASGSVFCATTQCLP----GGPSFSGMSKVVGNLGSLCGVGGYDRF----LKTF-------PYRLLFGVTTLLYTLS 331 (468)
T ss_pred hcCCCCceeEEEEcccCC----CCcchhhhHHHHHHHHHHHHHHHHHHH----HhhC-------CHHHHHHHHHHHHHHH
Confidence 11111111 111111111 112223334444455555555555543 2332 2555677777777766
Q ss_pred HHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHH
Q 039271 451 MIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSL 530 (609)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~ 530 (609)
.+........ .+. . ....+.++++...++.+++.++.+.+...++.+.+|++.+|+..|+.++..++|+.+++.
T Consensus 332 ~~~~~~l~~~-~~~--~---~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 332 SLFDLILVKR-WNL--A---FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred HhCceeeeec-ccc--c---cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 5443211100 000 0 001123344555677888888888888999999999999999999999999999999999
Q ss_pred HHHHhhhhc
Q 039271 531 LVVMVMGIT 539 (609)
Q Consensus 531 ~~~~i~~~~ 539 (609)
+.+.+.+..
T Consensus 406 ~gg~l~~~~ 414 (468)
T TIGR00788 406 LGVLLMETI 414 (468)
T ss_pred HHHHHHHHc
Confidence 888887654
No 100
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.72 E-value=2.4e-15 Score=150.21 Aligned_cols=183 Identities=15% Similarity=0.082 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 039271 61 LLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLL 140 (609)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 140 (609)
.....+..-...-.....+.+-+....|.+.-+..++......+..+++..+|.++|++ |||+.+.+..+...+..+.-
T Consensus 82 ~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is 160 (528)
T KOG0253|consen 82 VAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVIS 160 (528)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhh
Confidence 33334444444444555666667778899999999999999999999999999999995 99999988876655544444
Q ss_pred HHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHh
Q 039271 141 SVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLN 220 (609)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 220 (609)
..+ +|+..++..|.+.++|.|+ .|...++-.|.-|..+ |....-+. ....
T Consensus 161 ~~s----------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~wa 210 (528)
T KOG0253|consen 161 GAS----------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWA 210 (528)
T ss_pred cCC----------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHH
Confidence 433 6678899999999999999 8888999999999877 77766665 7778
Q ss_pred hhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCCh
Q 039271 221 VGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPL 274 (609)
Q Consensus 221 ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (609)
+|.++...+.-....++||||..........+...++++..+..+..-.++.+.
T Consensus 211 ig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~ 264 (528)
T KOG0253|consen 211 IGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDY 264 (528)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChH
Confidence 999998888877777899999877766555444444444443333333334333
No 101
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=2.4e-15 Score=151.41 Aligned_cols=119 Identities=18% Similarity=0.113 Sum_probs=105.9
Q ss_pred hCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcch
Q 039271 87 LQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSI 166 (609)
Q Consensus 87 ~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (609)
.+.+..-+|.+-+.+.++.++.++..|.+|||| |||+++..+.+..++...+.+.+ .
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S----------------------~ 119 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS----------------------R 119 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH----------------------H
Confidence 344556689999999999999999999999998 99999999999888877777777 7
Q ss_pred hHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc
Q 039271 167 FAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 167 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~ 235 (609)
|+..+.++|++.|+..|-.. .+.++++|.+++++ |+.+++....+..+|.++||.++|++..
T Consensus 120 ~F~afv~aR~l~Gi~kgnl~-v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 120 NFAAFVLARFLGGIFKGNLS-VIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHHHhhhhccCchH-HHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 78777778999999887754 67899999999988 9999999999999999999999999987
No 102
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.71 E-value=1.5e-14 Score=158.34 Aligned_cols=148 Identities=17% Similarity=0.161 Sum_probs=120.3
Q ss_pred HHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 039271 78 NLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGF 157 (609)
Q Consensus 78 ~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (609)
....++.+++|-+ .+..|+.+...+...+..++.|+|+|.+ |||..++.+.++..+|.+..+.+
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA-------------- 128 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA-------------- 128 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC--------------
Confidence 3446788888875 6678999999999999999999999995 99999999999999999998887
Q ss_pred CccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccccc
Q 039271 158 ISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSG 237 (609)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~ 237 (609)
++...+..+..+.|+|.|... .....++|..|.+. |..+..+.....-+....+|.++..+..+.
T Consensus 129 --------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~ 193 (599)
T PF06609_consen 129 --------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHS 193 (599)
T ss_pred --------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCC
Confidence 778899999999999976655 55667899999877 776666655554455556777776666667
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 039271 238 KWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 238 g~~~~f~~~~~~~~~~~~~ 256 (609)
+|||.|++.++...++++.
T Consensus 194 ~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 194 GWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred CcchHHHHHHHHHHHHHHH
Confidence 8999999988776666543
No 103
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.71 E-value=8e-16 Score=158.31 Aligned_cols=142 Identities=15% Similarity=0.175 Sum_probs=104.6
Q ss_pred CchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhH
Q 039271 89 QENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFA 168 (609)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (609)
.+....+.+..+..++..+++++.|+++||+ |||+++...+++.++++++++++. |.+....-.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~---------------~~~~~~~~m 144 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSV---------------GTTSPLGVM 144 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCC---------------CCCCCcchh
Confidence 4567778889999999999999999999995 999999999999999988555541 111111346
Q ss_pred HHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH----HHHHHhhhHHHHhhhhhhccccc-------
Q 039271 169 AIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY----FYFFLNVGSLFSNTILVYYEDSG------- 237 (609)
Q Consensus 169 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~ig~~~~~~i~~~l~~~~------- 237 (609)
+.+...|++.|+|.|+-+|...+..+|..-.+. ||...+. +.++.-.|++++-++...+....
T Consensus 145 ~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~ 218 (538)
T KOG0252|consen 145 MTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYP 218 (538)
T ss_pred hHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCch
Confidence 788899999999999999999999999877776 7766554 44455555555555544432211
Q ss_pred ----chhHHHHHHHHHHHH
Q 039271 238 ----KWTLGFLVSLASAVI 252 (609)
Q Consensus 238 ----g~~~~f~~~~~~~~~ 252 (609)
=||..|.+.++..+.
T Consensus 219 ~ld~vWRl~~glg~vpa~~ 237 (538)
T KOG0252|consen 219 HLDGVWRIIFGLGAVPALL 237 (538)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 288888776555443
No 104
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.68 E-value=8.1e-15 Score=165.18 Aligned_cols=201 Identities=16% Similarity=0.208 Sum_probs=148.2
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
+|.+.+.+....+....+.++.......++++++++..+.|++.+.+.+++.++.++.|+++||+ ||||.+.++.+++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 44443444434454445556666666778889999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhhcc-C----------------CCCCCCCC----------CccCCCc--chhHHHHHHHHHHHHHhhcCc
Q 039271 135 VGLVLLSVLSFLMI-K----------------PTGCGDGF----------ISCKPLS--SIFAAIFYLSIYLIAFGYGGH 185 (609)
Q Consensus 135 ~~~~~~~~~~~~~~-~----------------~~~~~~~~----------~~~~~~~--~~~~~~~~~~~~l~g~~~~~~ 185 (609)
++.++.++.-+... + ...|..+. ..|.+.. ...+..++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 99998876531110 0 00111000 0111101 113567889999999999999
Q ss_pred hhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccccc----------------------chhHHH
Q 039271 186 QPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSG----------------------KWTLGF 243 (609)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~----------------------g~~~~f 243 (609)
.+...+++.|.+|+++ |+..+++++.+..+|..+|+++++++.+.+ +|+..|
T Consensus 190 ~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~F 263 (633)
T TIGR00805 190 FPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGF 263 (633)
T ss_pred hhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHH
Confidence 9999999999999998 999999999999999999999999876532 277778
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 039271 244 LVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~ 262 (609)
++.+++.++..+.++..++
T Consensus 264 li~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 264 LICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHHHHHHHHHHHHHhCcc
Confidence 8877666655544444333
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.68 E-value=1.5e-14 Score=151.66 Aligned_cols=385 Identities=11% Similarity=0.049 Sum_probs=217.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH-
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV- 135 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~- 135 (609)
..+......++..+++-...++++.|++++.|++.+++|.+.++..+...+.+|+.|.++||+ |.||.+++...+..+
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHH
Confidence 455555556666666666779999999999999999999999999999999999999999995 977766554433222
Q ss_pred -HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHh----hcCchhhhhhhhhccCCCCChhhhhccch
Q 039271 136 -GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFG----YGGHQPTLATFGADQFDESKPKERQSKTL 210 (609)
Q Consensus 136 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 210 (609)
+.....+ ..|... .| ++++.++.++. .....|..-+++.+. + |+ .+.
T Consensus 87 ~~pff~~v-~~pll~----------------~n---~~lg~iig~i~l~~~f~~~~~~~Ea~~er~-----s--r~-~~f 138 (412)
T PF01306_consen 87 FGPFFIYV-FGPLLQ----------------SN---FWLGAIIGGIYLGLVFNAGVPLSEAYAERV-----S--RR-NGF 138 (412)
T ss_dssp CHHHHHHT-HHHHHH----------------TT----HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-----H--HH-HSS
T ss_pred HHHHHHHH-HHHHHH----------------HH---HHHHHHHHHHHHHHHHcccchHHHHHHHHH-----H--HH-hcC
Confidence 2222211 112110 11 22333332333 333334443433322 1 11 333
Q ss_pred hHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhccc
Q 039271 211 FFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNV 290 (609)
Q Consensus 211 ~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (609)
=+|-..+..++|.+++..++|.+.+ .+.+..||+..+..++..++.+..++..+++.+..+
T Consensus 139 eYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~------------------ 199 (412)
T PF01306_consen 139 EYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVAD------------------ 199 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SST------------------
T ss_pred CcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhc------------------
Confidence 3666777889999999999998886 566788887765554444444443332111110000
Q ss_pred ccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHH
Q 039271 291 VVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYS 370 (609)
Q Consensus 291 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (609)
. +++ ..++.+..+.. ++.+.++++....+.......|
T Consensus 200 ----~----------~~~--------~~~~~~~~~~~---------------------~l~k~~~fw~~~l~v~g~~~~Y 236 (412)
T PF01306_consen 200 ----A----------LGA--------KKDKVSLKDVL---------------------SLFKMRNFWFFVLFVIGVAAIY 236 (412)
T ss_dssp ----T----------SSS--------------HHHHH---------------------HHTTSHHHHHHHHHHHHHHHHH
T ss_pred ----c----------ccc--------CCCCCcHHHHH---------------------HHhcchhHHHHHHHHHHHHHHH
Confidence 0 000 00000000000 0111233333333333343444
Q ss_pred HHHh-cccceeeEecccccccccccccCcccccchhHHH---HHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHH
Q 039271 371 VVFT-QMASLFVEQGDVMNSHIGEFRLPAASMSAFDICS---VLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLII 446 (609)
Q Consensus 371 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~ 446 (609)
..+. |++.++...- +.. +..+..++..+.+. =++...+..++ .+|.+ ++..+.++..+
T Consensus 237 ~vfdqqf~~y~~~~f---~~~----~~g~~~~G~l~s~~v~~E~~~m~~~p~l----i~rig-------~k~~Lllag~i 298 (412)
T PF01306_consen 237 DVFDQQFPIYFASFF---QSA----GQGNQMYGYLWSVQVFLEALMMFFSPWL----INRIG-------AKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHTS---SSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---ccc----ccChhHHhHHHHHHHHHHHHHHHHHHHH----HHhcC-------hHhHHHHHHHH
Confidence 4443 4333332211 100 11122222222222 22333333333 45543 55678888888
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHH-HHHHHHHH
Q 039271 447 GMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLC-MASISFGN 525 (609)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~-~~~~~lg~ 525 (609)
+++-...++.. .+.+++++.-.++++-..+...+..-|+.+.+|++..++...+. +...++|.
T Consensus 299 ~~iRi~~~~~~----------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~ 362 (412)
T PF01306_consen 299 MAIRIIGSGFA----------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGI 362 (412)
T ss_dssp HHHHHHHHHT------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHH
T ss_pred HHHHHHHHhhh----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHH
Confidence 99998888774 36678888889999999999999999999999999999999986 57788999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhcccc
Q 039271 526 YVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWY 582 (609)
Q Consensus 526 ~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~ 582 (609)
.+.+.+.|.+.+.. ++...|++.+++.+...++-.+..++.
T Consensus 363 ~i~s~~~G~lyd~~----------------G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 363 IILSPLAGYLYDRI----------------GFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHhhhHHhhHhhc----------------CcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 98888888776532 334468888888777776666655543
No 106
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.68 E-value=6.4e-14 Score=143.07 Aligned_cols=139 Identities=15% Similarity=0.122 Sum_probs=121.5
Q ss_pred HHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 039271 71 AFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKP 150 (609)
Q Consensus 71 ~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (609)
........+.+.+++.++++..+++++...+..++.++.++.|++.+|+ |+|+.+++|+.++++|+.+..-+
T Consensus 27 ~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pA------- 98 (422)
T COG0738 27 FITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPA------- 98 (422)
T ss_pred HHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhh-------
Confidence 3344556777788999999999999999999999999999999999996 99999999999999999877644
Q ss_pred CCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhh
Q 039271 151 TGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTIL 230 (609)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~ 230 (609)
....++..++.+.++.+.|.+..+.+.+++++.+.+++. -..-+++.+..+.+|+.++|.++
T Consensus 99 ------------a~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 99 ------------ASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred ------------hhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHHHHHH
Confidence 123668889999999999999999999999999999876 44557888889999999999999
Q ss_pred hhccc
Q 039271 231 VYYED 235 (609)
Q Consensus 231 ~~l~~ 235 (609)
+++..
T Consensus 161 ~~lil 165 (422)
T COG0738 161 SSLIL 165 (422)
T ss_pred HHHHH
Confidence 98776
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.67 E-value=5.2e-15 Score=160.03 Aligned_cols=358 Identities=11% Similarity=0.070 Sum_probs=217.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhh----hccchhHHHH-HHHHHHHHHHHHH
Q 039271 66 GLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSD----SYWGRYLTCA-VFQLIFVVGLVLL 140 (609)
Q Consensus 66 ~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~~~~-~~~~~~~~~~~~~ 140 (609)
+..++.+.....++..|+++.+|+++..+|.+..+..+..++..|+.|.++| |+ ||||-.+ .+.+...++..++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 4555555666678899999999999999999999999999999999999999 74 9777655 4555656655554
Q ss_pred HHHhhh-ccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHH
Q 039271 141 SVLSFL-MIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFL 219 (609)
Q Consensus 141 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 219 (609)
... .| ... .......+.+..++..++......+..++.+|+.++.++ |.+..++.....
T Consensus 90 f~~-~p~~~~--------------~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~~~~ 149 (428)
T PF13347_consen 90 FSP-PPAGLS--------------FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRMIFS 149 (428)
T ss_pred hcc-ccchhh--------------hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHHHHH
Confidence 432 11 100 001223345666667888899999999999999886432 888888888888
Q ss_pred hhhHHHHhhhhhhccccc-------chhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhccccc
Q 039271 220 NVGSLFSNTILVYYEDSG-------KWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVV 292 (609)
Q Consensus 220 ~ig~~~~~~i~~~l~~~~-------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (609)
++|.++...+.+.+.+.. +|++..++.+++.++..++.....|+..++.++.++..+
T Consensus 150 ~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~---------------- 213 (428)
T PF13347_consen 150 MIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKIS---------------- 213 (428)
T ss_pred HHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccc----------------
Confidence 888876666665544322 578777777666665555444433330000000000000
Q ss_pred CCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHH
Q 039271 293 PANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVV 372 (609)
Q Consensus 293 p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (609)
+.+ .++. ..+.|.+.............+..
T Consensus 214 ------------------------------~~~---------------~~~~-----~~~nr~~~~l~~~~~~~~~~~~~ 243 (428)
T PF13347_consen 214 ------------------------------LRD---------------SLRS-----LFRNRPFRILLLAFFLQWLAFAL 243 (428)
T ss_pred ------------------------------ccc---------------chhh-----hcccchHHHHHHHHHHHHhhhhh
Confidence 000 0000 00011111111111111111111
Q ss_pred HhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHH
Q 039271 373 FTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMI 452 (609)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~ 452 (609)
......++... .+.. ......+.....+..++..++..++ .||+++|+ .+..+.++.+++.+
T Consensus 244 ~~~~~~y~~~~--vl~~-----~~~~~~~~~~~~~~~~v~~~~~~~l----~~r~gk~~-------~~~~~~~~~~~~~~ 305 (428)
T PF13347_consen 244 MNTFLPYYFTY--VLGN-----EGLISIFMLIFFVASIVGSPLWGRL----SKRFGKKK-------VYIIGLLLAALGFL 305 (428)
T ss_pred hhhHHHHHHHH--HhcC-----chhhHHHHHHHHHHHHHHHHHHHHH----HHHcccee-------ehhhhHHHHHHHHH
Confidence 11111111111 0111 1112233334555566666666665 45554442 46777777777777
Q ss_pred HHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCC-------cchhHHHHHHHHHHHHHHH
Q 039271 453 AAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAP-------DGIKSFGSSLCMASISFGN 525 (609)
Q Consensus 453 ~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~lg~ 525 (609)
++.+.. ..+.+++++..++.+++.+......+++..|..+ ++..|...|++++...++.
T Consensus 306 ~~~~~~--------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 306 LLFFLG--------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred HHHHHH--------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 766642 1466777888888999988888888888888776 3557999999999999999
Q ss_pred HHHHHHHHHhhhhcccC
Q 039271 526 YVSSLLVVMVMGITAKG 542 (609)
Q Consensus 526 ~ig~~~~~~i~~~~~~~ 542 (609)
.++..+.+.+.+..+..
T Consensus 372 ~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 372 GLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 99999999887766433
No 108
>PRK11462 putative transporter; Provisional
Probab=99.67 E-value=1.9e-13 Score=149.00 Aligned_cols=171 Identities=12% Similarity=0.130 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhHHHH-HHHHHHHHHHH
Q 039271 63 ANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY---WGRYLTCA-VFQLIFVVGLV 138 (609)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~-~~~~~~~~~~~ 138 (609)
+..+..++.+..+..++..|+++.+|+++..+|.+..+.-+.-++.-|+.|+++||. +||||-.+ ++.+.+.++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 445556676777778999999999999999999999999999999999999999972 58876655 45566666655
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
++... |... .......+.+.-++..+++.....+..++.+|+.++.++ |++..++...+
T Consensus 96 llf~~--p~~s--------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l~s~r~~~ 154 (460)
T PRK11462 96 LAYST--PDLS--------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISLQSWRFVL 154 (460)
T ss_pred HHHhC--CCCC--------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHHHHHHHHH
Confidence 54433 3211 001133344555566788888888889999999875432 88999999999
Q ss_pred HhhhHHHHhhhhhhcccc-------cchhHHHHHHHHHHHHHH
Q 039271 219 LNVGSLFSNTILVYYEDS-------GKWTLGFLVSLASAVIAL 254 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~~-------~g~~~~f~~~~~~~~~~~ 254 (609)
.++|+.+++.+...+... .+|+....+.+++.++..
T Consensus 155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 999888877665443332 246655555544443333
No 109
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.65 E-value=6.4e-14 Score=151.53 Aligned_cols=151 Identities=11% Similarity=0.100 Sum_probs=125.1
Q ss_pred HHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCC
Q 039271 84 TRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPL 163 (609)
Q Consensus 84 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (609)
.+++++...+.+.+.+++.+++.++.+++|.|.||+ .-.+.+....+...+..++....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~-------------------- 131 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV-------------------- 131 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 366788888999999999999999999999999995 86666666655554433333333
Q ss_pred cchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcc------ccc
Q 039271 164 SSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYE------DSG 237 (609)
Q Consensus 164 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~------~~~ 237 (609)
.+++.+++.|++.|+..+...|....+++.+|.+++ |+.-+++++...++|.++|++++..+. ...
T Consensus 132 --~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 132 --HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred --hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 678999999999999999999999999999999999 999999999999999999999988752 346
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCc
Q 039271 238 KWTLGFLVSLASAVIALLSYLMGTPG 263 (609)
Q Consensus 238 g~~~~f~~~~~~~~~~~~~~~~~~~~ 263 (609)
||||.|++.+++.+...++.++..|.
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecC
Confidence 89999999998877766655554443
No 110
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.64 E-value=9e-15 Score=148.19 Aligned_cols=146 Identities=14% Similarity=0.078 Sum_probs=133.7
Q ss_pred hhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcc
Q 039271 86 VLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSS 165 (609)
Q Consensus 86 ~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (609)
.++-+..++|++.....+...+..++.|.+.||+ |+|-.++.|..+.....+++++.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg---------------------- 156 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG---------------------- 156 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc----------------------
Confidence 4567788999999999999999999999999995 99999999999999999999987
Q ss_pred hhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHH
Q 039271 166 IFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLV 245 (609)
Q Consensus 166 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~ 245 (609)
.+++.++++|.++|+|.++...+..++++|.||++.+ |++++|..-.++.+|-.+||.++|.+-+..|.+.+|.+
T Consensus 157 ~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlV 231 (464)
T KOG3764|consen 157 NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLV 231 (464)
T ss_pred chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHH
Confidence 7788999999999999999999999999999999874 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 039271 246 SLASAVIALLSYLM 259 (609)
Q Consensus 246 ~~~~~~~~~~~~~~ 259 (609)
.++++++-..+.++
T Consensus 232 L~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 232 LAIVLLLDGALQLL 245 (464)
T ss_pred HHHHHHHHHHHHHh
Confidence 99888776655443
No 111
>PTZ00207 hypothetical protein; Provisional
Probab=99.64 E-value=1.5e-12 Score=143.65 Aligned_cols=173 Identities=11% Similarity=0.082 Sum_probs=127.0
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
+|..+...++.+.+... .|++.. ....+.+++|.+..+.+++.++.. ....+.+++|+++||+ |||+++.++.+++
T Consensus 26 Rw~~lva~~~~~~~~g~-~y~fsv-~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~ 101 (591)
T PTZ00207 26 RFALLVLGAFCSICTSF-MYAFNL-ISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVF 101 (591)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 34434433333433333 344443 344678899999999999887744 4456777899999995 9999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.++++++..... ..+++.+.+.|++.|+|.+...+.....+.++|| ++ ||.+.+
T Consensus 102 ~iG~ll~ala~~~~i----------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~G 158 (591)
T PTZ00207 102 CLGTLLFALTFQEVI----------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVA 158 (591)
T ss_pred HHHHHHHHHHhcccc----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHH
Confidence 999998887621111 1468889999999999999988888899999997 55 999999
Q ss_pred HHHHHHhhhHHH-HhhhhhhcccccchhHHHHHHHHHHHHHHH
Q 039271 214 YFYFFLNVGSLF-SNTILVYYEDSGKWTLGFLVSLASAVIALL 255 (609)
Q Consensus 214 ~~~~~~~ig~~~-~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 255 (609)
+...+.++|+.+ +++..+++. .+|+..|++.++..++..+
T Consensus 159 i~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 159 IMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHH
Confidence 999999999975 565555554 3577777766655544433
No 112
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.64 E-value=3.6e-13 Score=135.62 Aligned_cols=341 Identities=14% Similarity=0.124 Sum_probs=224.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 039271 62 LANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLS 141 (609)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 141 (609)
++..+=-+-.+.++.+.+ .-+++++|+|.+.+|.++++..++..+..++..+|+.|+ |.++.+..++++..+|..+=.
T Consensus 18 vlia~NLR~~itsvgPLL-~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~ 95 (395)
T COG2807 18 VLIAFNLRPAITSVGPLL-DEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRS 95 (395)
T ss_pred HHHHhccchhhhhhhhhH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHh
Confidence 333333344445554444 457889999999999999999999999999999999995 999999999988888776544
Q ss_pred HHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhh
Q 039271 142 VLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNV 221 (609)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 221 (609)
.. +.+.++.+-.+.|.|.+..+...++++.+.||++ -+..+|+|....++
T Consensus 96 ~~-----------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~ 145 (395)
T COG2807 96 LG-----------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGA 145 (395)
T ss_pred cc-----------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHH
Confidence 32 3567888888999999999999999999999975 45788999999999
Q ss_pred hHHHHhhhhhhccccc-chhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhh
Q 039271 222 GSLFSNTILVYYEDSG-KWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELY 300 (609)
Q Consensus 222 g~~~~~~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 300 (609)
|+.+++.+...+.++. ||+....+=+...+++++.++.-..+. +.+..+... .
T Consensus 146 ~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~--~~~~~~~~~--------------~---------- 199 (395)
T COG2807 146 GAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALRE--QAASIATKL--------------V---------- 199 (395)
T ss_pred HHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcccc--ccccccccc--------------c----------
Confidence 9999999998888776 799988877777777776665432111 111000000 0
Q ss_pred hhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhccccee
Q 039271 301 EVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASLF 380 (609)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (609)
++ .+-|+ +.......+.+-+.+..+|..+.+.+..+
T Consensus 200 ------------------~~------------------~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~WLP~il 235 (395)
T COG2807 200 ------------------SV------------------RKVWR--------SPLAWQVTLFMGLQSLLYYIVIGWLPAIL 235 (395)
T ss_pred ------------------cc------------------ccccc--------CchhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 00 00121 00011112223345677888888888877
Q ss_pred eEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 039271 381 VEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQ 460 (609)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 460 (609)
..++ ++ ....+.+..+..+..+....+...+ .+|..+ .+........++.++++.+.+..
T Consensus 236 i~~G--~s------a~~aG~llsl~~l~~~~~~ll~P~l----a~R~~n------~r~~~~~~~~~~l~G~~G~~~~P-- 295 (395)
T COG2807 236 IDRG--LS------AAEAGSLLSLMQLAQLPTALLIPLL----ARRSKN------QRPLVVLALLLMLVGLVGLLLAP-- 295 (395)
T ss_pred HHcC--CC------HHHhhhHHHHHHHHHHHHHHHHHHH----HHHhcc------cchHHHHHHHHHHHHHHHHHHhh--
Confidence 6643 22 2223333333333333333333333 233211 22345555566666666555531
Q ss_pred hhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 039271 461 RLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAP-DGIKSFGSSLCMASISFGNYVSSLLVVMVMGIT 539 (609)
Q Consensus 461 ~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~ 539 (609)
....+.| .++.|+|.+..+|-...++....+ ++..+.-+|+.+..+.+=..+||.+.|.+.|.+
T Consensus 296 -----------~~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 296 -----------GQLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred -----------hhHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 2223333 478899999999999999887665 455667777777777777788999998877644
No 113
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.60 E-value=1.7e-14 Score=158.81 Aligned_cols=180 Identities=11% Similarity=0.107 Sum_probs=132.0
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
+++.+...+...++.+..+|++..++|.|+++.+|++..+.++......++..++.+++|+++||+ |||+++..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 455555455555667788899999999999888999988888888888899999999999999995 9999988877654
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+.+.... . ..+...+++++++.+++.+...+....++.|.+|++. |+++++
T Consensus 327 ~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g 381 (490)
T PRK10642 327 FVLAIPAFILI-N------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALA 381 (490)
T ss_pred HHHHHHHHHHH-h------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHH
Confidence 44333222210 0 1235566778888887777767777888899999998 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHh
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 259 (609)
..+....+++.++|.+.+++.+..+ |+.++++..+..+++++..++
T Consensus 382 ~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 382 AAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 8555566777889999998877544 676666555555555444444
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.60 E-value=4.1e-12 Score=134.71 Aligned_cols=365 Identities=15% Similarity=0.090 Sum_probs=222.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhH-HHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY---WGRYL-TCAVFQLI 132 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~ 132 (609)
..+.--...+..++.+-.+..++..|+++..|+++..+|.+..+.-+.=++.-|+.|.+.||. +||+| -++++.+.
T Consensus 13 eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip 92 (467)
T COG2211 13 EKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIP 92 (467)
T ss_pred HHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHH
Confidence 334444456667777777888999999999999999999999999999999999999999974 47655 55566566
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
+++.+.++... |... .+.+..-.++.-.+.++++..+.-+..++.+++.++.++ |.+..
T Consensus 93 ~~i~~~l~F~~--p~~~--------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E-----R~~l~ 151 (467)
T COG2211 93 FAIVAVLLFIT--PDFS--------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE-----RASLT 151 (467)
T ss_pred HHHHHHHHHcC--CCcc--------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----HHHHH
Confidence 66666665554 2210 013344555666778899999999999999999776443 88889
Q ss_pred HHHHHHHhhhHHHHhhhhhhccc-------ccchhHHHHHHHHHHHHHHHHHH-hcCCcceecCCCCC-ChhHHHHHHHH
Q 039271 213 CYFYFFLNVGSLFSNTILVYYED-------SGKWTLGFLVSLASAVIALLSYL-MGTPGYRYVKPCGN-PLPRVAQVFIA 283 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 283 (609)
++...+.++|.++...+.+.+.. ..||+..-++.++...+..+..+ ..+++..+..+..+ ...+....+..
T Consensus 152 s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~ 231 (467)
T COG2211 152 SWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLL 231 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHH
Confidence 99888888887776555544432 24666665555555444444333 22222211111110 00000000000
Q ss_pred HHhhcccccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHH
Q 039271 284 AARKWNVVVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIW 363 (609)
Q Consensus 284 ~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (609)
. ...|.++..+...
T Consensus 232 ~------------------------------------------------------------------~~Nrp~~~~l~~~ 245 (467)
T COG2211 232 I------------------------------------------------------------------FKNRPLLLLLLMN 245 (467)
T ss_pred H------------------------------------------------------------------HccchHHHHHHHH
Confidence 0 0111222222222
Q ss_pred HHHHHHHHHHhcccceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHH
Q 039271 364 LCTIIYSVVFTQMASLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIG 443 (609)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g 443 (609)
++..+..........++.... ++.. ...............+++.++..++ .+|+++| ..+.++
T Consensus 246 l~~~~~~~i~~s~~~yy~~y~--lg~~----~l~~~~~~~~~~~~~l~~~~~~p~L----~~~~gkk-------~~~~~~ 308 (467)
T COG2211 246 LLLFIAFNIRGSIMVYYVTYV--LGDP----ELFAYLLLLASGAGLLIGLILWPRL----VKKFGKK-------KLFLIG 308 (467)
T ss_pred HHHHHHHHHHhhhhheeEEEE--cCCh----HHHHHHHHHHHHHHHHHHHHhHHHH----HHHhchH-------HHHHHH
Confidence 223322233333333444322 2221 2223333333334444444555554 3444432 357778
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcC-------CcchhHHHHHH
Q 039271 444 LIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQA-------PDGIKSFGSSL 516 (609)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~-------p~~~r~~~~g~ 516 (609)
.++.+++.+.+.+.. ..+..+.++..++.++|.+...+..++++.+.. -.+..|...|.
T Consensus 309 ~~~~~i~~~~~~f~~--------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~ 374 (467)
T COG2211 309 LLLLAVGYLLLYFTP--------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSG 374 (467)
T ss_pred HHHHHHHHHHHHhhc--------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHH
Confidence 888888877776642 335566666668888888888888888877644 35567888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhc
Q 039271 517 CMASISFGNYVSSLLVVMVMGIT 539 (609)
Q Consensus 517 ~~~~~~lg~~ig~~~~~~i~~~~ 539 (609)
..++.-+|.+++..+.+++....
T Consensus 375 ~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 375 MTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 88889999999999999988765
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.55 E-value=3.2e-11 Score=131.00 Aligned_cols=86 Identities=16% Similarity=0.127 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcc
Q 039271 475 SIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNT 554 (609)
Q Consensus 475 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~ 554 (609)
+.+.+.+..++.|+..+...+.+-++..++.|++..+...|++.+.+...+.+||.+.+.+.+.+++
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~------------- 445 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS------------- 445 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------
Confidence 3444555557888999999999999999999999999999999999999999999999999876622
Q ss_pred chhhHHHHHHHHHHHHHHHHH
Q 039271 555 GHMDRFYFLLAVLTAFDFVIY 575 (609)
Q Consensus 555 ~~~~~~f~~~a~~~~v~~v~~ 575 (609)
...-+....++.+++++++
T Consensus 446 --~r~g~~~l~~lf~~gl~ll 464 (477)
T PF11700_consen 446 --QRYGFLFLLVLFLIGLILL 464 (477)
T ss_pred --chhHHHHHHHHHHHHHHHH
Confidence 1223555566666665555
No 116
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.52 E-value=1.6e-13 Score=140.99 Aligned_cols=178 Identities=20% Similarity=0.221 Sum_probs=144.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhcc-chhHHHHHHHHHH-
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYW-GRYLTCAVFQLIF- 133 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~~~~~~~~- 133 (609)
|.+|.+++++++..+.-|++..|.|.|+.|+.|+|..++++..+.+-.+...+++++|++|||++ |||....+...+.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999998 7776654433322
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+..... |+ .+..+..+..+++|+...+.+-.+.....|..|++. -|++.|
T Consensus 332 ~~~~~~~w~~--~~------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~G 385 (448)
T COG2271 332 TASLVLYWLA--PN------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATG 385 (448)
T ss_pred HHHHHHHHcC--CC------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhc
Confidence 2222222222 22 356777788888888888888777888899999887 888899
Q ss_pred HHHHHHhh-hHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 214 YFYFFLNV-GSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 214 ~~~~~~~i-g~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+..++.-+ |..++....|++.|.+||...|++..+.++++.+++..
T Consensus 386 f~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 386 FVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred hhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 88888777 99999999999999999999999877776666655443
No 117
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.49 E-value=1.4e-12 Score=139.46 Aligned_cols=173 Identities=14% Similarity=0.030 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
.+..+.........++.+..++|.|+++++|.+..+++++.+...++..++.+++|+++||+ |||+.+..+.+...+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~ 296 (393)
T PRK15011 218 TLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFY 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 33333333444444555667899999999999999999988888888888999999999995 99998877665544443
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
..+... .+.+.+++.+++.+++.+...+....+..|.+|+ + |+++.++++.
T Consensus 297 ~~~~~~----------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~~~~~~ 347 (393)
T PRK15011 297 AGMLMA----------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSATTLYTN 347 (393)
T ss_pred HHHHHH----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHHHHHHH
Confidence 333222 3455566677777777776666677778888874 4 7788999888
Q ss_pred HHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhc
Q 039271 218 FLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMG 260 (609)
Q Consensus 218 ~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 260 (609)
..++|..++|.++|++.+.+||+..|++.+++.+++++.++..
T Consensus 348 ~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 348 TSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999998999999998888877777766543
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.49 E-value=1.6e-10 Score=119.43 Aligned_cols=344 Identities=16% Similarity=0.153 Sum_probs=201.6
Q ss_pred HHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccc-----hhHHHHH-HHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 039271 84 TRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWG-----RYLTCAV-FQLIFVVGLVLLSVLSFLMIKPTGCGDGF 157 (609)
Q Consensus 84 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (609)
..|++++..-.+..+....+... ..+..|+.||++ + ||.-+++ |.+++..+..+.....+....
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~-------- 76 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAE-------- 76 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcc--------
Confidence 45788988888888888877665 688899999996 7 6655554 444555555555554322100
Q ss_pred CccCCCc-chhHH--HHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcc
Q 039271 158 ISCKPLS-SIFAA--IFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYE 234 (609)
Q Consensus 158 ~~~~~~~-~~~~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~ 234 (609)
+..+.+ +...+ ...++..+.|+|.+..+.+..++++|..|+++ |++..++.+...-+|.+++.++.+.+.
T Consensus 77 -~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL 149 (403)
T PF03209_consen 77 -SGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLL 149 (403)
T ss_pred -cccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 000000 11222 33444556788888899999999999999998 999999999999999999999999887
Q ss_pred cccch-hHHHH---HHHHHHHHHHHHHHhcCCcceecC-CCCCChhHHHHHHHHHHhhcccccCCCchhhhhhcCCcccc
Q 039271 235 DSGKW-TLGFL---VSLASAVIALLSYLMGTPGYRYVK-PCGNPLPRVAQVFIAAARKWNVVVPANSDELYEVAGPESAI 309 (609)
Q Consensus 235 ~~~g~-~~~f~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~ 309 (609)
+.+.. |..-. .+.+..++.++..+-..++.++.. ..+++..
T Consensus 150 ~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~---------------------------------- 195 (403)
T PF03209_consen 150 DPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRP---------------------------------- 195 (403)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCc----------------------------------
Confidence 77653 22222 222333334444443333322211 0000000
Q ss_pred cCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccceeeEecccccc
Q 039271 310 KGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASLFVEQGDVMNS 389 (609)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (609)
++.+. |+.+.. -++.++++.+ +++....+.....-..++ -+..++.
T Consensus 196 ------------~f~~a---------------~~~~~~--~~~a~~f~~f--l~l~t~a~~~QD~iLEPy---gg~Vfgm 241 (403)
T PF03209_consen 196 ------------PFREA---------------WRQVWA--SPQARRFFVF--LFLGTLAFFMQDVILEPY---GGEVFGM 241 (403)
T ss_pred ------------cHHHH---------------HHHHHh--CCChhHHHHH--HHHHHHHHHhhHHHcCCc---hhHHcCC
Confidence 00000 000000 0111222222 111222222211111111 1111111
Q ss_pred cccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 039271 390 HIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGE 469 (609)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 469 (609)
.. -.+..+...-..+.++...+.++.. .+|.. +.....+|.....+++.......
T Consensus 242 sv----~eTT~Lta~~~~G~L~G~~~~g~~l---~~~~~-------~~~~a~~G~~~~~~~f~lii~a~----------- 296 (403)
T PF03209_consen 242 SV----GETTRLTAFWGGGTLLGMLLAGFLL---SRRLG-------KKRTAALGCLLGALAFALIILAG----------- 296 (403)
T ss_pred CH----HHHHHHHHHHHHHHHHHHHHHHHHh---cCCCC-------chHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 11 1123344455555566555555542 23322 22345567777777766655432
Q ss_pred CcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 039271 470 KASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGIT 539 (609)
Q Consensus 470 ~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~ 539 (609)
...+.+.+....+++|++.+.+.....+...+.++++..|..+|.|-.++.++..++..+.+.+.|..
T Consensus 297 --~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 297 --PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred --hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12245667788899999999999999999999999999999999999999999999988888887754
No 119
>PRK09952 shikimate transporter; Provisional
Probab=99.47 E-value=2.5e-12 Score=139.61 Aligned_cols=182 Identities=16% Similarity=-0.001 Sum_probs=132.6
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
+++.+..++...++..+.+|...++.+.|+++.+|++......+.........++.++.|+++||+ ||||++..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 344444444556677788888889999999989999887766666667777888899999999995 9999988876655
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+.+.... .. ......+.+..++.+++.+...+..+++++|.+|++. |+++.+
T Consensus 327 ~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g 382 (438)
T PRK09952 327 TLSAFPFFMAL-EA-----------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAG 382 (438)
T ss_pred HHHHHHHHHHH-Hc-----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHh
Confidence 44433332220 00 0223344445566678888888888999999999988 888888
Q ss_pred HH-HHHHhhhHHHHhhhhhhccccc--chhHHHHHHHHHHHHHHHHHHhc
Q 039271 214 YF-YFFLNVGSLFSNTILVYYEDSG--KWTLGFLVSLASAVIALLSYLMG 260 (609)
Q Consensus 214 ~~-~~~~~ig~~~~~~i~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~ 260 (609)
+. ..+..+|+.++|.+.+++.+.. +|...+.+.+++.+++.+..+..
T Consensus 383 ~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 383 VGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 84 4455689999999999997743 48888888777777776665544
No 120
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.45 E-value=1.8e-12 Score=141.81 Aligned_cols=177 Identities=13% Similarity=0.052 Sum_probs=134.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+.++.+.+..++....+++...|+|.|+++++|++..++++......++..++.+++|+++||+ |||+.+.....+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4577777778888888888889999999999999999999999999999999999999999996 999887665444433
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+..++.+. .. .+.....+.+++.|++.............|.+|++. |+++.|+.
T Consensus 337 ~~~~~~~~--~~------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~ 390 (467)
T PRK09556 337 IFTLGVYQ--HA------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIK 390 (467)
T ss_pred HHHHHHHH--hc------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHH
Confidence 33222221 00 234445566666665443333333456679999988 99999999
Q ss_pred HHHHhh-hHHHHhhhhhhccc------------ccchhHHHHHHHHHHHHHHHHHHh
Q 039271 216 YFFLNV-GSLFSNTILVYYED------------SGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 216 ~~~~~i-g~~~~~~i~~~l~~------------~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+...++ |+.++|.+.|++.+ ..||+..|++.+++.+++++..+.
T Consensus 391 ~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 391 GTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 999887 77999999999999 578999999887777777655543
No 121
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.44 E-value=1.1e-12 Score=139.04 Aligned_cols=172 Identities=16% Similarity=0.059 Sum_probs=132.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
++.++......++....++....+++.|+++++|.+..+.+.......+...++.+++|+++||+ |||+.+..+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~ 296 (394)
T TIGR00883 218 RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAA 296 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 34466666777777888888889999999888999999999999999999999999999999995 99998876554443
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
+........... ..+.+.+++..++.+++.+...+...+++.|.+|+++ |+++.++
T Consensus 297 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~ 352 (394)
T TIGR00883 297 LLAVPLLMALLD------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASL 352 (394)
T ss_pred HHHHHHHHHHhc------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeee
Confidence 332211111000 1235566667777888888888999999999999988 8888887
Q ss_pred -HHHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHH
Q 039271 215 -FYFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAV 251 (609)
Q Consensus 215 -~~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~ 251 (609)
++....+|+.++|.++|++.+..| |++.+++.+++.+
T Consensus 353 ~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 353 AYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 456667899999999999999888 8877766655443
No 122
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.43 E-value=2.2e-11 Score=126.11 Aligned_cols=387 Identities=9% Similarity=-0.015 Sum_probs=214.3
Q ss_pred HHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 039271 77 VNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDG 156 (609)
Q Consensus 77 ~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (609)
.....|.++.+| +...+-|...+|.+.+....+.+-|+.|++ |-|....++..+..+|..+=.++..|...
T Consensus 65 a~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss~p~v~------- 135 (480)
T KOG2563|consen 65 APINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISSLPFVP------- 135 (480)
T ss_pred hhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhccCcccc-------
Confidence 445567777778 667778899999999999999999999995 99999999999999999888887655322
Q ss_pred CCccCCCcchhHH--HHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcc
Q 039271 157 FISCKPLSSIFAA--IFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYE 234 (609)
Q Consensus 157 ~~~~~~~~~~~~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~ 234 (609)
+.++ +.+.+..+.+...-.......-+.+-+|++++ |..+..+-.+++.+|..+|-++.+.+.
T Consensus 136 ---------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 136 ---------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred ---------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceec
Confidence 2334 66677777766666655555566677899988 888888777777777777776666665
Q ss_pred ccc------chhH--HHHHHHHHHHHHHHHHHhcCCcceecCCCCCChhHHHHHHHHHHhhcccccCCCchhhhhhcCCc
Q 039271 235 DSG------KWTL--GFLVSLASAVIALLSYLMGTPGYRYVKPCGNPLPRVAQVFIAAARKWNVVVPANSDELYEVAGPE 306 (609)
Q Consensus 235 ~~~------g~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~ 306 (609)
.+. .|.. .|+...++..+.++...+.+++.++.||..+....
T Consensus 201 ~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~------------------------------ 250 (480)
T KOG2563|consen 201 PSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL------------------------------ 250 (480)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh------------------------------
Confidence 433 3543 34434444333333344444433333332211000
Q ss_pred ccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHHHhcccceeeEeccc
Q 039271 307 SAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYSVVFTQMASLFVEQGDV 386 (609)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (609)
++.++..... .-..+++.++.++........|+..+..+-..+.. .+
T Consensus 251 ------------~~~~f~~si~-------------------~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~--sg 297 (480)
T KOG2563|consen 251 ------------QDASFPKSIK-------------------SCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP--SG 297 (480)
T ss_pred ------------hcCcHHHHHH-------------------HHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc--cc
Confidence 0000111000 00011122222222222222333332211111111 11
Q ss_pred ccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 039271 387 MNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYIS 466 (609)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 466 (609)
.+ +..++.+.....+..++.+.+.+.+.|+. |+ .+..+.+-.....++..++....
T Consensus 298 Y~------~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~---------fk~~~~v~~~~~~v~~~~l~~~t-------- 353 (480)
T KOG2563|consen 298 YE------GVFAGYIGALMIVAGMLGALASGIIADKT-KK---------FKLTTLVLYLFALVGTLMLLTCT-------- 353 (480)
T ss_pred CC------ccccchhHHHHHHHHHHHHHHHHhhhhhh-hh---------HHHHHHHHHHHHHHHHHHHHHhh--------
Confidence 11 12344444444444455555544443322 11 11222222222233312222211
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 039271 467 PGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPG 546 (609)
Q Consensus 467 ~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~ 546 (609)
...-+.++.+....+.|..+....|...++..|..=+...++..|+.++.+++-+.+-..+.+...+..+. ++
T Consensus 354 ----~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~---~~ 426 (480)
T KOG2563|consen 354 ----LFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGP---PG 426 (480)
T ss_pred ----ccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCC---CC
Confidence 11224455666667788888888899999999988778889999999988777766555555544332110 11
Q ss_pred CCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccccccccCCch
Q 039271 547 WIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKGINLDED 590 (609)
Q Consensus 547 ~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~~~ 590 (609)
|- ...-+.++..+++.+++..+..+.+++.+.|+.
T Consensus 427 ~~---------~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e~~ 461 (480)
T KOG2563|consen 427 NT---------FPANIFLTVSALLGAILVAFFRPDYRRLRAEAG 461 (480)
T ss_pred CC---------ccchhHhHHHHHHHHHHHhhhhhhHHhHhhhhc
Confidence 10 111245566667777777777777776655543
No 123
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.41 E-value=7.4e-12 Score=132.37 Aligned_cols=180 Identities=17% Similarity=0.050 Sum_probs=130.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHH-HHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTC-AVFQLIFV 134 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~-~~~~~~~~ 134 (609)
+.++..++..++....++....+++.|+.+.+|.+..+.+++.+...++..++.+++|+++||+ |||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4566677777888888888889999999999999999999999999999999999999999995 988621 11111111
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.+...+..... ....+.+.......+.+.+.+ ..+...++++|.+|+++ |++..++
T Consensus 294 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~~~ 351 (399)
T TIGR00893 294 IAGLVLSLLMFAT---------------NYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTGGL 351 (399)
T ss_pred HHHHHHHHHHHHh---------------ccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHHHH
Confidence 2211111110000 000223333333333344444 78899999999999988 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHH
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 258 (609)
++...++|..++|.+.|++.+..| |+..|++.++..+++.+..+
T Consensus 352 ~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888 99999888877766665543
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.41 E-value=7.9e-12 Score=133.71 Aligned_cols=170 Identities=15% Similarity=0.132 Sum_probs=134.5
Q ss_pred HHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhh
Q 039271 67 LATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFL 146 (609)
Q Consensus 67 ~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 146 (609)
+..++++....+++.|+.+ .|. .+.++..+.+.++..++.++.|+++||+ ||||.+..+..+..++.+++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~--- 299 (399)
T PRK05122 227 LASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA--- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh---
Confidence 3455566666788888764 455 3456667788888899999999999995 99999988887777776655554
Q ss_pred ccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHH
Q 039271 147 MIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFS 226 (609)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 226 (609)
++.+.+++..++.|++.+...+.......|.+|+++ |++.+++++...++|..++
T Consensus 300 -------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~~ 354 (399)
T PRK05122 300 -------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLGIT 354 (399)
T ss_pred -------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHH
Confidence 345666777888999999888888888889888877 9999999999999999999
Q ss_pred hhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecC
Q 039271 227 NTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVK 268 (609)
Q Consensus 227 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (609)
|.+.|++.+..||++.|++.+++.+++++..+..+++.+++.
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAV 396 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccC
Confidence 999999999899999999988887777776665555444433
No 125
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.41 E-value=8.7e-12 Score=131.80 Aligned_cols=161 Identities=12% Similarity=0.022 Sum_probs=127.7
Q ss_pred HHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 039271 69 TLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMI 148 (609)
Q Consensus 69 ~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (609)
.........+++.|+.+++|.+..+.+++.........++.+++|+++||+ |||+++..+.++..+........
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~----- 285 (375)
T TIGR00899 212 WGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAAD----- 285 (375)
T ss_pred HHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHH-----
Confidence 333444556788899889999999999988888778888899999999996 99999888766544444333333
Q ss_pred CCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhh
Q 039271 149 KPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNT 228 (609)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 228 (609)
++.+.+.+.+++.+++.+...+....+..|.+|+ + +++..++++...++|..++|.
T Consensus 286 -----------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~~g~~ 341 (375)
T TIGR00899 286 -----------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGRVGWIIAGS 341 (375)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHH
Confidence 3456666777788888888888888888898875 3 558899999999999999999
Q ss_pred hhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 229 ILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 229 i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
++|++.+..||+..|++.+++.+++.++...
T Consensus 342 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 342 VGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 9999999899999999988887777766544
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.41 E-value=4.1e-12 Score=133.76 Aligned_cols=169 Identities=18% Similarity=0.141 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
.+.+....++..........+.+.|. +++|.+..+.+++.+...++..++.++.|+++||+ |||+.+..+.++..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHH
Confidence 34444444444444444555666665 56889988999999999999999999999999995 99999998888777776
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
+++... +. .+...++...++.+++.+...+..+.++.|.+|+++ |++..++++.
T Consensus 285 ~~~~~~--~~------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~ 338 (377)
T TIGR00890 285 AAMLFI--PM------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYT 338 (377)
T ss_pred HHHHHc--cc------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHH
Confidence 655544 11 122334455667788888888888889999999988 9999999999
Q ss_pred HHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHH
Q 039271 218 FLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIAL 254 (609)
Q Consensus 218 ~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 254 (609)
..++|..++|.+.|.+.+..||++.|++.+++.++++
T Consensus 339 ~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 339 AKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999988877665543
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.40 E-value=1.5e-11 Score=131.87 Aligned_cols=171 Identities=13% Similarity=-0.025 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 039271 59 SILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLV 138 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 138 (609)
+.+....++....++.+..++|.|+.+ .|.+..+.+.+.+...++..++.++.|+++||+ |||+.+..+.+...++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 333344445555666777888888865 799999999999999999999999999999995 999998876655555444
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
.+... .+.+.+.+..++.|++.++..+...++..|.+|+++ |++..++++..
T Consensus 301 ~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~ 352 (406)
T PRK11551 301 ALAAA----------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAV 352 (406)
T ss_pred HHHhc----------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHh
Confidence 33333 234455566667788777788888999999999988 99999999999
Q ss_pred HhhhHHHHhhhhhhccccc-chhHHHHHHHHHHHHHHHHHHh
Q 039271 219 LNVGSLFSNTILVYYEDSG-KWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.++|..++|.+.|++.+.. +|...++....+.+++.++.+.
T Consensus 353 ~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 353 GRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998865 4556666665555555554443
No 128
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=1.3e-11 Score=128.48 Aligned_cols=173 Identities=25% Similarity=0.310 Sum_probs=149.6
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH-HHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYL-TCAVFQLIFVV 135 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~~~~~~~~~~~ 135 (609)
.++...+..++..........+.+.|+.+.+|.+..+.++......++..++.++.|+++||+ |||+ .+..+.++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 254 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 344455556666666777778888888887799999999999999999999999999999996 9999 99999888888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+.+.+... .+.+...+..++.+++.+...+...+++.|.+|+++ |++.++.+
T Consensus 255 ~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 306 (352)
T cd06174 255 GLLLLALA----------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLF 306 (352)
T ss_pred HHHHHHHh----------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHH
Confidence 87777665 446778888999999999999999999999999887 99999999
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
+...++|..++|.+.+.+.+..+|+..|++.++..+++.+...
T Consensus 307 ~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 307 NTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999989999999998888777766543
No 129
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.38 E-value=1e-11 Score=140.91 Aligned_cols=134 Identities=14% Similarity=0.040 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHH
Q 039271 97 NVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIY 176 (609)
Q Consensus 97 ~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (609)
...+..++..++.+++|+++||+ |||++++.+.++.+++++++++. .+...+++.++
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~----------------------~s~~~ll~~~~ 656 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG----------------------NSESAMIALLC 656 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH----------------------ccHHHHHHHHH
Confidence 34556688899999999999995 99999999988888877776665 33455666677
Q ss_pred HHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 177 LIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 177 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
+.+++.++..+...++++|++|++. |++++|+.+....+|+++||.+++.+.+. +...+|++.+++.+++.++
T Consensus 657 l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll 729 (742)
T TIGR01299 657 LFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLL 729 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHH
Confidence 7788777888889999999999988 99999999999999999999999987763 4567787777776666555
Q ss_pred HHhc
Q 039271 257 YLMG 260 (609)
Q Consensus 257 ~~~~ 260 (609)
.++.
T Consensus 730 ~~~L 733 (742)
T TIGR01299 730 ALKL 733 (742)
T ss_pred HHhC
Confidence 5443
No 130
>PRK03699 putative transporter; Provisional
Probab=99.37 E-value=1.3e-11 Score=132.11 Aligned_cols=171 Identities=12% Similarity=0.035 Sum_probs=132.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+.++.+.+..++....++++..++|.|+++++|++..++++..+.+.++..++.+++|+++||+ +||+.+.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 3455555666666677788889999999999999999999999999999999999999999995 999988877665555
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
...++... .+...+.+..++.|++.+...+...+...|..|.+ ++...++.
T Consensus 284 ~~~~~~~~----------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~ 334 (394)
T PRK03699 284 LMYLFVNT----------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFI 334 (394)
T ss_pred HHHHHHHc----------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHH
Confidence 44433332 23344455566778877777777777777766533 44567787
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
....++|+.++|.+.|++.+..|++..|++.+++.+++.+.
T Consensus 335 ~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 335 LTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 88889999999999999999999999998877766666443
No 131
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.37 E-value=1.1e-11 Score=133.56 Aligned_cols=174 Identities=12% Similarity=0.053 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhhCCc--------hhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHH
Q 039271 60 ILLANQGLATLAFFGVGVNLVLFLTRVLQQE--------NANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQL 131 (609)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 131 (609)
.+++..++..........+++.|+.+ .|.+ ....+.+.++..+...++.++.|+++||+ |||+++..+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~ 289 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLV 289 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 34444444444444444677788764 4543 35678899999999999999999999995 99999999998
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
+..++..++... .+. ..+.+.+++..++.|++.+...+....+++|.+|+++ |++.
T Consensus 290 ~~~v~~~l~~~~-~~~-----------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~ 345 (418)
T TIGR00889 290 AWALRFGFFAYG-DPE-----------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASA 345 (418)
T ss_pred HHHHHHHHHHHc-Ccc-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHH
Confidence 877776555542 000 1234567778888999999888888999999999888 9999
Q ss_pred HHHHH-HHHhhhHHHHhhhhhhcccc------cchhHHHHHHHHHHHHHHHHHHh
Q 039271 212 FCYFY-FFLNVGSLFSNTILVYYEDS------GKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 212 ~~~~~-~~~~ig~~~~~~i~~~l~~~------~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+++++ ...++|..+||.++|++.+. +||+..|.+.+++.+++.+.++.
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~ 400 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMI 400 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99987 56789999999999999886 46999998887776665554433
No 132
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.37 E-value=1.9e-11 Score=130.85 Aligned_cols=165 Identities=13% Similarity=0.058 Sum_probs=128.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCchh---hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 039271 66 GLATLAFFGVGVNLVLFLTRVLQQENA---NAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSV 142 (609)
Q Consensus 66 ~~~~~~~~~~~~~~~~yl~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 142 (609)
+........+.++++.|+.+..+.... ..+.+.++..++..++.++.|+++||+ |||+.+..+.++..++.+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSF 307 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 333344445567778887764442221 245556667788888999999999995 9999999888776665555444
Q ss_pred HhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhh
Q 039271 143 LSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVG 222 (609)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 222 (609)
. .+.+.+++.+++.|++.+...|...+++.+..|+++ |++.+++++...++|
T Consensus 308 ~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g 359 (408)
T PRK09874 308 V----------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDIG 359 (408)
T ss_pred h----------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHHH
Confidence 3 346677788888999999999999999989888887 899999999999999
Q ss_pred HHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 223 SLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 223 ~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
..+||.++|++.+.+||++.|++.+++.+++.+..+.
T Consensus 360 ~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 360 NVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887777665544
No 133
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.35 E-value=1.9e-11 Score=130.43 Aligned_cols=161 Identities=15% Similarity=0.070 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
+..++....+.+...+....+++.|+.+++|.+..+.+++.+...++..++.++.|+++||+ |||+.+..+.++..+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 318 (405)
T TIGR00891 240 FVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLI 318 (405)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHH
Confidence 33344444555556666778899999989999999999999999999999999999999995 99999888776543322
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
...... ..+.+.+.+..++.+++.+...+...+++.|.+|+++ |++.+|+.+.
T Consensus 319 ~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~ 371 (405)
T TIGR00891 319 IPVFAI---------------------GANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQ 371 (405)
T ss_pred HHHHHh---------------------CCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHH
Confidence 211111 1334555556566677777777788899999999988 9999999999
Q ss_pred HHhhhHHHHhhhhhhcccccc-hhHHHHHH
Q 039271 218 FLNVGSLFSNTILVYYEDSGK-WTLGFLVS 246 (609)
Q Consensus 218 ~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~ 246 (609)
..++|+.++|.+.|++.+..| |+..+...
T Consensus 372 ~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 372 LGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 999999999999999999888 87666543
No 134
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.34 E-value=7.5e-12 Score=111.88 Aligned_cols=133 Identities=17% Similarity=0.217 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHH
Q 039271 98 VSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYL 177 (609)
Q Consensus 98 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 177 (609)
.+.+.++..++.++.|+++||+ |||+.+..+..+..++.+.+... .+.+.+.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~ 60 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS----------------------SNITVLIIARFL 60 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh----------------------ccHHHHHHHHHH
Confidence 3456678888999999999995 99999999988888777766655 457778888999
Q ss_pred HHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 039271 178 IAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 178 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
.|++.+...+...+++.|.+|+++ |++..++.+...++|..++|.+.+++.+..+|++.|++.++..+++.+..
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 99999999999999999999999999988899999988877666665554
Q ss_pred Hh
Q 039271 258 LM 259 (609)
Q Consensus 258 ~~ 259 (609)
..
T Consensus 135 ~~ 136 (141)
T TIGR00880 135 AF 136 (141)
T ss_pred hh
Confidence 43
No 135
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.32 E-value=6.1e-11 Score=126.80 Aligned_cols=176 Identities=11% Similarity=0.037 Sum_probs=135.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
..+.+.+..++.+..++++.++++.|+.+ +|.+..+++...+.+.++..++.++.|+++||+ |||+.+..+..+..++
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~ 283 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVG 283 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHH
Confidence 34555556666777888888999999976 799999999999999999999999999999995 9999998887766666
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCC-CChhhhhccchhHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDE-SKPKERQSKTLFFCYF 215 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~ 215 (609)
..++... + .+...+ ...+.|++.+...|.......+.+++ ++ |++.+++.
T Consensus 284 ~~~~~~~--~-------------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 334 (393)
T PRK09705 284 FCGFIWL--P-------------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLVAFM 334 (393)
T ss_pred HHHHHHc--c-------------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHHHHH
Confidence 5544322 1 111112 22456778888888777777787764 44 88899999
Q ss_pred HHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHhcCCc
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLMGTPG 263 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 263 (609)
+...++++.++|.+.|++.+..| |+..|++.+++.+.+.++.+...++
T Consensus 335 ~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 335 QGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999876 7888888777777666665554443
No 136
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=7.3e-11 Score=125.70 Aligned_cols=170 Identities=8% Similarity=-0.090 Sum_probs=142.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.++..++..++.....+...++.+.|+++ +|.+..++|...+...++..++.+++|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 455666666666677777778899999965 899999999999999999999999999999995 999999999999888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
...++... ++.+.+++...+.|+..+...+....++.+. |+++ |+++.+++
T Consensus 283 ~~~~~~~~----------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~ 333 (382)
T TIGR00902 283 RWAIIGAI----------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALY 333 (382)
T ss_pred HHHHHHhH----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHH
Confidence 88777766 6678888899999999999999999999987 7766 78888887
Q ss_pred H-HHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 039271 216 Y-FFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 216 ~-~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
+ ....+|..++|.++|++.+..|+ ..|++.++..+++++..
T Consensus 334 ~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 334 NALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 6 46789999999999999999886 66777777666665444
No 137
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.31 E-value=2.7e-11 Score=130.63 Aligned_cols=162 Identities=13% Similarity=0.039 Sum_probs=127.6
Q ss_pred HHHHHHhhHHHHHHHHHHhh---CCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 039271 68 ATLAFFGVGVNLVLFLTRVL---QQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLS 144 (609)
Q Consensus 68 ~~~~~~~~~~~~~~yl~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~ 144 (609)
....+.....+++.|+.+.+ +.+..+.+++.++..+...++.+++|+++||+ |||+.+..+.++..++.+++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~- 312 (420)
T PRK09528 235 VACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFA- 312 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhc-
Confidence 33333344456777776543 56667789999999999999999999999995 99999998888877777766655
Q ss_pred hhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH-HHHHHhhhH
Q 039271 145 FLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY-FYFFLNVGS 223 (609)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig~ 223 (609)
.+.+.+.+.+++.+++.+...+....++.|.+|++. |++..+. ++...++|.
T Consensus 313 ---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 313 ---------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGA 365 (420)
T ss_pred ---------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHH
Confidence 456777788888888888877777889999999877 7776655 677889999
Q ss_pred HHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 039271 224 LFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 224 ~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
+++|.+.|++.+..||+..|.+.+++.+++.+..+
T Consensus 366 ~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 366 VFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987776665554443
No 138
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.31 E-value=5.7e-11 Score=129.50 Aligned_cols=177 Identities=13% Similarity=0.124 Sum_probs=124.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhcc-chhHHH-HHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYW-GRYLTC-AVFQLIF 133 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~-~~~~~~~ 133 (609)
+.++..++..++....+++...++|.|++++.|++..++++....+.++..++.+++|+++||+. |||+.. .....+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 45677777777777788888899999999889999999999999999999999999999999941 344332 2222222
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+.+.+. +. .+.+...+..++.|.+..........+..|.+|++. |+++.|
T Consensus 333 ~~~~~~~~~~--~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g 386 (452)
T PRK11273 333 TIATIVYWLN--PA------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAG 386 (452)
T ss_pred HHHHHHHHHh--cc------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHH
Confidence 2322222221 11 223333344444444333333334456779999988 999999
Q ss_pred HHHHHHhhhHHH-HhhhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 039271 214 YFYFFLNVGSLF-SNTILVYYEDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 214 ~~~~~~~ig~~~-~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
+.+...++|+.+ +|.+.|++.+..||+..|++.++..+++++...
T Consensus 387 ~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 387 FTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 999888888665 799999999999999999988877766655544
No 139
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.31 E-value=2.5e-11 Score=129.01 Aligned_cols=187 Identities=17% Similarity=0.092 Sum_probs=141.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHH-hhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccch-hHHHHH
Q 039271 51 NKGGWKYASILLANQGLATLAFFGVGVNLVLFLTR-VLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGR-YLTCAV 128 (609)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~~~~ 128 (609)
.+.+||.+++..+.++.....++.+.+..-.|+++ +.+.+.+-.|++++...++.++..|..|+.+.|. +. |+-++.
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~ 107 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIV 107 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHHH
Confidence 45679999999999999999999888888889874 4677788899999999999999999999999995 75 777888
Q ss_pred HHHHHHHHHHHH-HHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhc
Q 039271 129 FQLIFVVGLVLL-SVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQS 207 (609)
Q Consensus 129 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (609)
+.++.++|.++. ++...|+ ...+.++++|++.|+|.+.. +..=+++++....++
T Consensus 108 s~ii~~~g~llY~~l~~~~~------------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d------ 162 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPN------------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED------ 162 (488)
T ss_pred HHHHHHHHHHHHHHHHhccc------------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc------
Confidence 899999999988 5553443 36889999999999987764 355788888766666
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhh----hccccc---------chhHHHHHHHHHHHHHHHHHHhcCCc
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILV----YYEDSG---------KWTLGFLVSLASAVIALLSYLMGTPG 263 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~----~l~~~~---------g~~~~f~~~~~~~~~~~~~~~~~~~~ 263 (609)
|.++++....+..+|..+||.+.. ...+.+ -++.+-|+.+++.++.++.+....++
T Consensus 163 R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 163 RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 778887766665666666665543 332211 14566677776666666555444443
No 140
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.31 E-value=9.4e-11 Score=127.00 Aligned_cols=169 Identities=14% Similarity=0.032 Sum_probs=112.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 039271 65 QGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLS 144 (609)
Q Consensus 65 ~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~ 144 (609)
.++....+|++.+|+|.|+.+.+|.+..+.+...++..++..++.++.|+++||+ |||+++..+.++..+........
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~- 329 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSA- 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHH-
Confidence 3445777888999999999988999999999988888888899999999999995 99998877655433322211111
Q ss_pred hhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHh-hhH
Q 039271 145 FLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLN-VGS 223 (609)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-ig~ 223 (609)
... ..+....+....+..++.+...+..+.+.+|.||++. |++++|+.+...+ +++
T Consensus 330 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g 386 (432)
T PRK10406 330 LQN-----------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFG 386 (432)
T ss_pred HHc-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHH
Confidence 010 0112222222222223333444566788999999999 9999999766544 445
Q ss_pred HHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHh
Q 039271 224 LFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 224 ~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 259 (609)
..+|.+.+++.. .| |...+++.++..+++++..+.
T Consensus 387 ~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 387 GSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred hHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 558888886643 45 656666666666665555444
No 141
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.30 E-value=6.6e-11 Score=128.28 Aligned_cols=177 Identities=18% Similarity=0.132 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhcc-chhHHH-HHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYW-GRYLTC-AVFQLIFV 134 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~-~~~~~~~~ 134 (609)
.++.+.+..++....++++.+++|.|+.+++|++..+++...+.+.++..++.+++|+++||+. ++|+.. ....+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 4566666666667777778889999998889999999999999999999999999999999952 222322 22211111
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
+....+... +. .+.....+..++.|++............+|.+|++. |++..|+
T Consensus 324 ~~~~~~~~~--~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 377 (434)
T PRK11663 324 LSVGSLWLM--PF------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGF 377 (434)
T ss_pred HHHHHHHHc--cc------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHH
Confidence 111111111 11 122223333333444333333334556789898877 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.+...++|+.++|.+.|++.+..||+..|++.+++.+++.+..+.
T Consensus 378 ~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 378 VGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888777666554443
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.30 E-value=1e-10 Score=124.39 Aligned_cols=157 Identities=14% Similarity=0.153 Sum_probs=121.7
Q ss_pred HHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccC
Q 039271 70 LAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIK 149 (609)
Q Consensus 70 ~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (609)
+.+.....++|.|+++ .|.+..++++..+...++..++.++.|+++||+ |||+++..+..+..++.+... .
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~------ 284 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S------ 284 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h------
Confidence 3344445678888865 699999999999999999999999999999996 999999888777666554332 1
Q ss_pred CCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhh
Q 039271 150 PTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTI 229 (609)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i 229 (609)
.........+.+++.+...|...+.+.|..|+++ ++...+.++...++|..+||.+
T Consensus 285 ------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~~ 340 (381)
T PRK03633 285 ------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPSF 340 (381)
T ss_pred ------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 1122334556677666778888888999888766 6667777788899999999999
Q ss_pred hhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 230 LVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 230 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+|++.+++||++.|++.+.+.+++.+..+.
T Consensus 341 ~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 341 TAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999887777666554443
No 143
>PRK12382 putative transporter; Provisional
Probab=99.30 E-value=4.2e-11 Score=127.82 Aligned_cols=160 Identities=17% Similarity=0.186 Sum_probs=129.3
Q ss_pred HHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 039271 68 ATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLM 147 (609)
Q Consensus 68 ~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 147 (609)
....+..+..+.+.|+.+ .|.+ +.++....+.++..++.++.|++.||+ ||||.+..+..+..++.+++...
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~---- 299 (392)
T PRK12382 228 QGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA---- 299 (392)
T ss_pred HHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc----
Confidence 345555566777888764 4554 355666777788889999999999995 99999998888777776665544
Q ss_pred cCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHh
Q 039271 148 IKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSN 227 (609)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~ 227 (609)
.+.+..++..++.|++.+...+...+.+.|.+|+++ |++..++++...++|..++|
T Consensus 300 ------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~ 355 (392)
T PRK12382 300 ------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSG 355 (392)
T ss_pred ------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 345666778888899988888888888899999888 99999999999999999999
Q ss_pred hhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 228 TILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 228 ~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.+.|++.+..||+..|.+.+++.+++.+..+.
T Consensus 356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 356 PLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988877777665543
No 144
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.30 E-value=6.1e-11 Score=127.76 Aligned_cols=162 Identities=12% Similarity=-0.069 Sum_probs=130.6
Q ss_pred HHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 039271 72 FFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPT 151 (609)
Q Consensus 72 ~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (609)
..++..++|.|+++.+|.+..+.+++.+...++..++.++.|+++||. ++++.+..+.++..++.+++...
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 309 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM-------- 309 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc--------
Confidence 345667889999888999999999999999999999999999999995 88888888777666666555443
Q ss_pred CCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhh
Q 039271 152 GCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILV 231 (609)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~ 231 (609)
++.+...+..++.|++.+...+...+++.|.+|++. |++.+++++...++|..+||.+.|
T Consensus 310 --------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 310 --------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHH
Confidence 445566677777888888777788889999999887 999999999999999999999999
Q ss_pred hcccccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 232 YYEDSGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 232 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
++.+..|++..++..+++.++..++.....+
T Consensus 370 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 370 GLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999888888776665554444433333
No 145
>PRK03545 putative arabinose transporter; Provisional
Probab=99.30 E-value=1.9e-10 Score=122.80 Aligned_cols=172 Identities=12% Similarity=-0.045 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 039271 59 SILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLV 138 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 138 (609)
+...+..++.....+....+++.|+.+..|.+..+++++.+...++..++.++.|+++||+ |||+.. .+..+..++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~ 285 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLL 285 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHH
Confidence 3333444444555555667888888888899999999999999999999999999999995 987654 44443333333
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
++... ..+.+.+.+..++.|++.+...+...+.+.+..| +. |++++++++..
T Consensus 286 ~l~~~---------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~ 337 (390)
T PRK03545 286 LLLPA---------------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFSGI 337 (390)
T ss_pred HHHHH---------------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHHHH
Confidence 22221 1345666677778888887777777778888766 45 78889999888
Q ss_pred HhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhc
Q 039271 219 LNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMG 260 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 260 (609)
.++|..+||.++|++.+.+|++..|+..+.+.+++++.....
T Consensus 338 ~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 338 FNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888877777665443
No 146
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.28 E-value=2.1e-10 Score=123.10 Aligned_cols=176 Identities=13% Similarity=0.001 Sum_probs=130.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHH-HHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCA-VFQLIFVV 135 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~-~~~~~~~~ 135 (609)
.++...+..++....+++..++.|.|++ ++|.+..+.+++.+...++..++.++.|+++||+ |||+.+. .+.+...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGI 300 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHH
Confidence 4556666677777888888899998885 5899999999999999999999999999999995 9888764 23333333
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+.+.+... +.. ...+.+..++..++.|++.+...+. .+...|..| ++ |+++++++
T Consensus 301 ~~~~l~~~--~~~---------------~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~------~g~~~g~~ 355 (402)
T TIGR00897 301 FTLALYYI--PQH---------------FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH------KGAAMSVL 355 (402)
T ss_pred HHHHHHHH--HHc---------------cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch------hHHHHHHH
Confidence 32222221 110 0123555666777778777776554 455667544 46 89999999
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+...++|..++|.+++.+.+.+||...|++.+++.+++.+...+
T Consensus 356 ~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 356 NLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888777666555443
No 147
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.28 E-value=2.4e-11 Score=117.77 Aligned_cols=136 Identities=14% Similarity=0.142 Sum_probs=111.1
Q ss_pred HHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 039271 76 GVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGD 155 (609)
Q Consensus 76 ~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (609)
-.-+..+...+.+++.++..++.++|..-..+.+.++|++.||.+|-|..-++-..+..+|.+..+...+
T Consensus 63 p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi---------- 132 (459)
T KOG4686|consen 63 PGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI---------- 132 (459)
T ss_pred chhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH----------
Confidence 3456777777788888899999999999999999999999999889887766666666777776665421
Q ss_pred CCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc
Q 039271 156 GFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~ 235 (609)
.+.+|++..+|++.|+|.-....+.+.++..+|..++ .+.++|++....-+|+..--.+.+++.+
T Consensus 133 ---------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 133 ---------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred ---------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 2568999999999999988888888999999999998 9999999888888888766666666655
Q ss_pred c
Q 039271 236 S 236 (609)
Q Consensus 236 ~ 236 (609)
.
T Consensus 198 ~ 198 (459)
T KOG4686|consen 198 T 198 (459)
T ss_pred H
Confidence 3
No 148
>PRK15075 citrate-proton symporter; Provisional
Probab=99.26 E-value=1.9e-10 Score=124.71 Aligned_cols=153 Identities=18% Similarity=0.136 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHH-H
Q 039271 62 LANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVL-L 140 (609)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~-~ 140 (609)
+...++....++.+..+.|.|+++.+|++..+.++......++..++.+++|+++||+ |||+++..+.++..+.... .
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444556667778889999999988999999999988888999999999999999996 9999887765443322211 1
Q ss_pred HHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH-HH
Q 039271 141 SVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF-FL 219 (609)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~ 219 (609)
... .. ..+.....+..++.+++.+...+....++.|.+|++. |+.+.++.+. +.
T Consensus 323 ~~~--~~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~ 377 (434)
T PRK15075 323 SWL--VA-----------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLAT 377 (434)
T ss_pred HHH--Hc-----------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHH
Confidence 111 00 0122233333444566666667777788999999998 8999888544 44
Q ss_pred hhhHHHHhhhhhhcccccchh
Q 039271 220 NVGSLFSNTILVYYEDSGKWT 240 (609)
Q Consensus 220 ~ig~~~~~~i~~~l~~~~g~~ 240 (609)
.+++.++|.+.|++.+..|++
T Consensus 378 ~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 378 AIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHhhhHHHHHHHHHHhcCCc
Confidence 456788999999999988853
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.26 E-value=2.7e-10 Score=125.31 Aligned_cols=173 Identities=15% Similarity=0.107 Sum_probs=127.9
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHH-HHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 039271 65 QGLATLAFFGVGVNLVLFLTRVLQQENANAANNVS-KWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVL 143 (609)
Q Consensus 65 ~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~ 143 (609)
.++.....+....+.+.|+.+++|++..+.+++.. ...++..++.+++|+++||+ |||+.+..+.++..+..+.+...
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l 309 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLL 309 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556678888988889999999999874 55689999999999999995 99998877665545444333221
Q ss_pred hhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhH
Q 039271 144 SFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGS 223 (609)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 223 (609)
... ..+.+.+.+..++..+..|...+...++..+..+++. +++.+++.+...++|.
T Consensus 310 ~~~------------------~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~~lg~ 365 (491)
T PRK11010 310 SIT------------------DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALSAVGR 365 (491)
T ss_pred Hhc------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHHHHH
Confidence 100 0223344445555555555555667888889998887 7788999999999999
Q ss_pred HHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 224 LFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 224 ~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
.+++.+.|++.+.+||+..|.+.+++.+++++.....++
T Consensus 366 ~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 366 VYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 988889999999999999999988888888776655543
No 150
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.26 E-value=2.6e-09 Score=110.42 Aligned_cols=106 Identities=13% Similarity=0.069 Sum_probs=75.4
Q ss_pred HHHHHHHHHHhhCC---ch----hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHhhhc
Q 039271 76 GVNLVLFLTRVLQQ---EN----ANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAV-FQLIFVVGLVLLSVLSFLM 147 (609)
Q Consensus 76 ~~~~~~yl~~~~g~---~~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~~~~~~~~~~~~~~ 147 (609)
..++|+|+++..+. +. +..+...++..+..++..|+.|.++|.. |+||-... ...+-++..+.+.+. |.
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i--~~ 111 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFI--PP 111 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHh--CC
Confidence 35678888877654 33 4457778889999999999999999996 86665544 433444444545444 11
Q ss_pred cCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCC
Q 039271 148 IKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESK 201 (609)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 201 (609)
+.+++...+...+..++.........+++.|..++++
T Consensus 112 -----------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~ 148 (438)
T COG2270 112 -----------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN 148 (438)
T ss_pred -----------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc
Confidence 1345566666667788888888889999999998876
No 151
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.25 E-value=1.7e-10 Score=127.13 Aligned_cols=150 Identities=13% Similarity=0.054 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 039271 74 GVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGC 153 (609)
Q Consensus 74 ~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (609)
....++|.|+++++|.+..+++++.+...++..++.+++|+++||+ |||+++..+.++..++.++.... +
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~--~------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAI--G------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhc--c-------
Confidence 4567899999889999999999999999999999999999999995 99999888766555444333222 0
Q ss_pred CCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhc
Q 039271 154 GDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l 233 (609)
..+.+.+.+..++.+....+..+...+++.|.+|+++ |++.+++++...++|+.+||.++|++
T Consensus 363 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~l 425 (496)
T PRK03893 363 -----------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGALI 425 (496)
T ss_pred -----------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHHH
Confidence 1223333344444333333445667788999999888 99999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHH
Q 039271 234 EDSGKWTLGFLVSLASA 250 (609)
Q Consensus 234 ~~~~g~~~~f~~~~~~~ 250 (609)
.+.+||+..+...++..
T Consensus 426 ~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 426 AQRLDLGTALASLSFSL 442 (496)
T ss_pred hccCChHHHHHHHHHHH
Confidence 99999988876555433
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.25 E-value=2.2e-10 Score=119.29 Aligned_cols=177 Identities=17% Similarity=0.113 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.++..++..++...+.|...+|+.+++++..|++...+++++..+.++..++.+++|+++|| +.|+++....++..+.
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~ 289 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALA 289 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHH
Confidence 56667777777778888888999999999999999999999999999999999999999999 7888888877776666
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
.+.+.+. +.+.+...+..++.|+...........-+++ ..++. ++.+.+++.
T Consensus 290 ~l~l~~~---------------------~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~------~~~a~sl~~ 341 (394)
T COG2814 290 LLALTFT---------------------GASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDA------ADLAGSLNV 341 (394)
T ss_pred HHHHHHh---------------------cchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCc------hHHHHHHHH
Confidence 6555544 2445666666666777666655555555555 33344 778899999
Q ss_pred HHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCc
Q 039271 217 FFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPG 263 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 263 (609)
...|+|..+|..++|.+.+++|+....++.++..++++++.+...++
T Consensus 342 aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 342 AAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999998888877655443
No 153
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.25 E-value=3.1e-10 Score=123.43 Aligned_cols=186 Identities=14% Similarity=0.094 Sum_probs=154.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchh--HHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRY--LTCAVFQLI 132 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~~ 132 (609)
.|.+...++..++.+-+...+......|.++++|++..+...+..+..+...++.+++|++.||+ |.| ++++.++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 35667777788888888889999999999999999999999999999999999999999999995 998 888888777
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..+..+...+...+.. ....+.+.+++.-++.|+..|..++..-++.+++.|+++ .+..+
T Consensus 359 ~~~i~~~g~~G~~~~~--------------~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efF 418 (477)
T PF11700_consen 359 WIIIPLYGLFGFWPSF--------------FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFF 418 (477)
T ss_pred HHHHHHHHHHHhhhcc--------------cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHH
Confidence 6444433333111210 011557778888889999999999999999999999988 88999
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLMGT 261 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 261 (609)
|+|.+..-..+.+||.+.|.+.+..| .|+.+....++.+++++++...+
T Consensus 419 gly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 419 GLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999876 88999888888888887775543
No 154
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.24 E-value=6.6e-11 Score=124.68 Aligned_cols=164 Identities=14% Similarity=0.121 Sum_probs=118.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+.++.+.+..++.....+.+..+.+.|+.+.+|.+..+.++..+...++..++.++.|+++||+.+||+...........
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 34566666677777777788889999999999999999999999999999999999999999842334333222111111
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
...+......+ ..+.....+..++.|+......+....+..|.+|+++ |++..+++
T Consensus 296 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 351 (379)
T TIGR00881 296 IVSLLVYWLNP------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFV 351 (379)
T ss_pred HHHHHHHhcCc------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHH
Confidence 11111111001 1233444455555666555666666788899999988 99999999
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHH
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGF 243 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f 243 (609)
+...++|+.++|.+.|.+.+.+||++.|
T Consensus 352 ~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 352 GFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 9999999999999999999999998754
No 155
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.23 E-value=1.7e-10 Score=125.16 Aligned_cols=181 Identities=12% Similarity=0.052 Sum_probs=123.6
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.++.+.+..++.....+++.+++|.|+++..|++..++++....+.+...++.+++|+++||+ |+++....+..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 456666666666777788889999999988999999999999999999999999999999995 7544333333222221
Q ss_pred HHHHH-HHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 137 LVLLS-VLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 137 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
.+... +...+. .+.+..+...++.|++.............|.+|++. |+++.|++
T Consensus 331 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 386 (438)
T TIGR00712 331 TIAVIVYWMNPA------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFT 386 (438)
T ss_pred HHHHHHHHhcCC------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhh
Confidence 11111 110011 122333333444454433333333456779999888 99999999
Q ss_pred HHHHhhhH-HHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 216 YFFLNVGS-LFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 216 ~~~~~ig~-~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
+...++|+ .++|.+.|.+.+..||...|++.++..+++.+..+...+
T Consensus 387 ~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 387 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred chHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888875 689999999999999999998877766666655444333
No 156
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.23 E-value=2.2e-10 Score=124.98 Aligned_cols=172 Identities=12% Similarity=-0.007 Sum_probs=135.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc-cchhHHHHHHHHHH-
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY-WGRYLTCAVFQLIF- 133 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Grr~~~~~~~~~~- 133 (609)
+.++..++..++..++++....+++.|++ ++|.+..+++++.++..++..++.+++|+++||. +++|+...++....
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 45666666777777888888889999986 4799999999999999999999999999999983 13444443333222
Q ss_pred -HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 134 -VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 134 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
.++.+++... .+.+.+++.+++.|++.+...+...+++.|.+|+++ +++.+
T Consensus 320 ~~l~~ll~~~~----------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~ 371 (455)
T TIGR00892 320 NGLTHLLCALA----------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAV 371 (455)
T ss_pred HHHHHHHHHHh----------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHH
Confidence 2222332222 456777888889999999999999999999999887 89999
Q ss_pred HHHHHHHhhhHHHHhhhhhhccccc-chhHHHHHHHHHHHHHHHH
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSG-KWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~ 256 (609)
++++...++|..+||.++|++.+.. +|++.|++.+++.+++.+.
T Consensus 372 g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 372 GLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred hHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 9999999999999999999999877 4999999988776665543
No 157
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.20 E-value=8e-09 Score=111.60 Aligned_cols=162 Identities=21% Similarity=0.147 Sum_probs=113.5
Q ss_pred HHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc--cc--hhHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 039271 78 NLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY--WG--RYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGC 153 (609)
Q Consensus 78 ~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (609)
....|+.+++|+++++.....+...+-- ..-++.|.++|.+ +| ||+-++++.++..++...++.. |..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~--~~~----- 82 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL--PAS----- 82 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc--ccc-----
Confidence 3455788899999999887666655444 3456689999995 33 4444444554444444444433 221
Q ss_pred CCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhc
Q 039271 154 GDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l 233 (609)
..+.....+..++..+|........-+++.|....+... |+...+..+....+|++++..++|.+
T Consensus 83 -----------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 83 -----------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred -----------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 133455566667788888888888899999987554422 77888888999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 234 EDSGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 234 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
.+..+++..|.+.+++.++..+..+...+
T Consensus 148 ~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 148 LDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 99999999999888776666554444433
No 158
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=3.5e-10 Score=122.99 Aligned_cols=166 Identities=13% Similarity=0.013 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 039271 75 VGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCG 154 (609)
Q Consensus 75 ~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (609)
+..+.+ ++.+++|.+..+.++......++..++.+++|+++||+ |||+.+..+.++..++.+++.+...+...
T Consensus 303 ~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 375 (481)
T TIGR00879 303 IMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFVT----- 375 (481)
T ss_pred hHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhcccC-----
Confidence 334444 44557899998889999999999999999999999995 99999999887777776666533111100
Q ss_pred CCCCccCCCc-chhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhc
Q 039271 155 DGFISCKPLS-SIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 155 ~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l 233 (609)
+.+ ..+...+....+..+.......+....++.|.+|+++ |++..++.+...++|++++|.+.+++
T Consensus 376 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 376 -------GSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred -------CcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0012222222222222222334666778899999888 99999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhc
Q 039271 234 EDSGKWTLGFLVSLASAVIALLSYLMG 260 (609)
Q Consensus 234 ~~~~g~~~~f~~~~~~~~~~~~~~~~~ 260 (609)
.+..+|++.|++.+++.+++.++....
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHhee
Confidence 988899999988887776666655443
No 159
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.19 E-value=4.3e-10 Score=109.21 Aligned_cols=167 Identities=18% Similarity=0.134 Sum_probs=130.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHH-
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF- 133 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~- 133 (609)
...+|.+.+..++...+.+=+.+.-+.++++.+|+|+..++.+.+......+...++.|.++||+ ||+...+.+..+.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASACILT 341 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHHHHH
Confidence 34567666666666666666667778899999999999999999999999999999999999997 9988777766544
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
..++..+.+. .+.-+.+..+.|+.+.......+.+++-+.|+++ .|++++
T Consensus 342 l~~H~~l~Ft------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q------LGTayg 391 (459)
T KOG4686|consen 342 LLGHSGLFFT------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGTAYG 391 (459)
T ss_pred HHHhhhHHhh------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcchHH
Confidence 4555555554 3334566677787777777778899999999888 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccc---hhHHHHHHHHHHHH
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGK---WTLGFLVSLASAVI 252 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g---~~~~f~~~~~~~~~ 252 (609)
..+...|+|-.+.|+++|.+.+.-| |--.|.+....+.+
T Consensus 392 f~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL 433 (459)
T KOG4686|consen 392 FIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMAL 433 (459)
T ss_pred HHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999998754 44456555444433
No 160
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.17 E-value=5.8e-09 Score=107.76 Aligned_cols=84 Identities=11% Similarity=0.032 Sum_probs=70.3
Q ss_pred hhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccc---------
Q 039271 166 IFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDS--------- 236 (609)
Q Consensus 166 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~--------- 236 (609)
.++..++++.++.|.|.+..++..++++++..++++ +.+.+++.+.+..+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 568889999999999999999999999999999887 77889999999999999999999977632
Q ss_pred -------cchhHHHHHHHHHHHHHHH
Q 039271 237 -------GKWTLGFLVSLASAVIALL 255 (609)
Q Consensus 237 -------~g~~~~f~~~~~~~~~~~~ 255 (609)
..|+++|++.++..++..+
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688888865554443333
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.17 E-value=3.9e-10 Score=118.25 Aligned_cols=153 Identities=11% Similarity=0.067 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHHHHHHhhH-HHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVG-VNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~-~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
.++.+++..++.+..++... .+.|.|.++.+|.+..+.+++.....++..++.++.|+++||+ |||+.+..+..+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHH
Confidence 44555555566666666555 6778887777999999999999999999999999999999995 999998887666666
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcch-hHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSI-FAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
+...+... . +.+.+++..++.|++.+...+...+++.|.+|+++ |++..++
T Consensus 290 ~~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~ 341 (365)
T TIGR00900 290 AILVVGLT----------------------PPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGA 341 (365)
T ss_pred HHHHHHhh----------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHH
Confidence 55555443 2 36677788888999999999999999999999887 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccc
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGK 238 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g 238 (609)
++...++|..++|.++|++.+.+|
T Consensus 342 ~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 342 QFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999887643
No 162
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.16 E-value=4.5e-10 Score=115.90 Aligned_cols=183 Identities=15% Similarity=0.041 Sum_probs=139.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+..|.+.+..+...-+|.++..+++.|++++++.+..+++.+...+.+...+..+++|+||||+ |.+|++.......++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHH
Confidence 4678888888888888899999999999999999999999999999999999999999999996 999988888777777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+....... +.. . ....+...+....+..++..|.-+.....++...||++ -|...|+.
T Consensus 297 ~~~~l~~~--~~~----~---------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~v 354 (417)
T COG2223 297 AAALLSLF--LTG----F---------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIV 354 (417)
T ss_pred HHHHHHcc--ccc----c---------ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHH
Confidence 66655544 110 0 00123333443333444455555555667788877753 66788899
Q ss_pred HHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLMGT 261 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 261 (609)
....++|+..-|..-+...+..| ++..|++.....+++.+..+...
T Consensus 355 ga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 355 GAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888887 88888888777777666554433
No 163
>PRK10504 putative transporter; Provisional
Probab=99.16 E-value=1.1e-09 Score=119.90 Aligned_cols=157 Identities=10% Similarity=-0.041 Sum_probs=121.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.+...++..++...++.....+.|.|++..+|.++.+.++......++..++.++.|+++||+ |||+++..+.++..++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALV 340 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 445555556666666555556777788777899999999999888888888889999999996 9999999888877766
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
..++... +. ..+.+.+.+..++.|++.+...+....+..+.+|++. ++..+++.+
T Consensus 341 ~~~~~~~--~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~ 395 (471)
T PRK10504 341 SLLFMLV--AL-----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLS 395 (471)
T ss_pred HHHHHhc--cc-----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHH
Confidence 6555443 10 1223344455666788888888888899999999887 999999999
Q ss_pred HHHhhhHHHHhhhhhhcccccch
Q 039271 217 FFLNVGSLFSNTILVYYEDSGKW 239 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g~ 239 (609)
+..++|..+|+.++|.+.+..|+
T Consensus 396 ~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 396 MIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999988766554
No 164
>TIGR00895 2A0115 benzoate transport.
Probab=99.16 E-value=3e-10 Score=120.60 Aligned_cols=148 Identities=16% Similarity=0.065 Sum_probs=114.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+..+.+.+..++....++....++| ++.+++|.+..+.++..+...++..++.+++|+++||+ |||+.+....+ ..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~-~~~ 326 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLL-GAV 326 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHH-HHH
Confidence 3444555555666677777777887 66678899999999999999999999999999999996 98854443333 222
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
...++... ..+.+..++..++.|++.+...+...+++.|.+|+++ |++.++++
T Consensus 327 ~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 379 (398)
T TIGR00895 327 FAVLVGST---------------------LFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWA 379 (398)
T ss_pred HHHHHHHH---------------------hhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHH
Confidence 22222221 0335556677788899999999999999999999888 99999999
Q ss_pred HHHHhhhHHHHhhhhhhc
Q 039271 216 YFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l 233 (609)
+...++|..+||.++|++
T Consensus 380 ~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 380 IGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHhHHhc
Confidence 999999999999999875
No 165
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.16 E-value=1.2e-09 Score=119.52 Aligned_cols=178 Identities=13% Similarity=0.055 Sum_probs=124.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHH---HHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAV---FQL 131 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~---~~~ 131 (609)
++.++.+.+..++....++.+..++|.|+.+.+|++..+.++..++..++..++.+++|+++||+ ++|+.... ..+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 45678888888899999999999999999999999999999999999999999999999999995 65432110 011
Q ss_pred HHHHHH-----HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhh
Q 039271 132 IFVVGL-----VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQ 206 (609)
Q Consensus 132 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (609)
+..++. .++... .. ..+.....+...+.+.+.+...+.......|..|. .
T Consensus 339 ~~~~~~~~~~~~~~~~~--~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~----- 393 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALP--YL-----------------SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F----- 393 (465)
T ss_pred HHHHHHHHHHHHHHHHH--Hc-----------------CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H-----
Confidence 111111 111111 00 01233333444445555555555555555566553 4
Q ss_pred ccchhHHHHHHHHhhhHHHHhhhhhhccccc---chhHHHHHHHHHHHHHHHHHHh
Q 039271 207 SKTLFFCYFYFFLNVGSLFSNTILVYYEDSG---KWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 207 ~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~---g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
+|...++.+...++|+.++|.+.|++.+.. +|+..|++.++..+++.++...
T Consensus 394 -~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 394 -LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 889999999999999999999999987643 3888898888777777665544
No 166
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.15 E-value=6.2e-10 Score=119.82 Aligned_cols=165 Identities=13% Similarity=0.001 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHH-hhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHH-HHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTR-VLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTC-AVFQLIF 133 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~-~~~~~~~ 133 (609)
+.++...+..++....++++.+++|.|+++ ..|.+..+++.......++..++.+++|+++||+ +||+.. ....++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 346667777788888889999999999976 3477888899999999999999999999999995 877753 3333333
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++. ++... . .+....+.+..+.++|.....+.......|.+|+++ |+.++|
T Consensus 321 ~~~~-~~~~~---~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g 372 (412)
T TIGR02332 321 AAGW-LLASA---T------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIA 372 (412)
T ss_pred HHHH-HHHHh---c------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHH
Confidence 3322 11111 0 111222222233334443334444556677788877 999999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHH
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLAS 249 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~ 249 (609)
+.+...++|+.++|.+.|.+.+..| |++.|++.++.
T Consensus 373 ~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 373 VINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 9999999999999999999999875 99998877654
No 167
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.14 E-value=1.7e-09 Score=115.23 Aligned_cols=168 Identities=9% Similarity=-0.107 Sum_probs=128.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.++..++..++....+.....+++.|++ +.|.+..+.+.+.+...++..+..++.|++.||+ |+|+.+..+.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 34555555555556666666678888986 5899999999999999999999999999999995 999999988887777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+.+++... ++.+.+++..++.|++.+...+....++.+. ++++ +++..+.+
T Consensus 283 ~~~~~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~ 333 (382)
T PRK11128 283 RWGLMGST----------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALY 333 (382)
T ss_pred HHHHHHhh----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHH
Confidence 66655544 5677788888899999888888888887775 4444 56677776
Q ss_pred H-HHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHH
Q 039271 216 Y-FFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALL 255 (609)
Q Consensus 216 ~-~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 255 (609)
+ ...++|..+||.++|.+.|.+|+ ..|+..+++.+.+++
T Consensus 334 ~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 334 SALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 5 55677889999999999998887 456666555554443
No 168
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.11 E-value=3e-09 Score=113.48 Aligned_cols=174 Identities=17% Similarity=0.004 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHH-HHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTG-TVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
++..+...++...+.....++.+.|+.+ .|.+..+++++...... ...++.+++|++.||+ |+|+.+..+.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 3434444455555556666778888875 79999999998888764 5667789999999995 9999998877665333
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCC-CChhhhhccchhHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDE-SKPKERQSKTLFFCYF 215 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~ 215 (609)
.+.......... ..+....+....+.+++.+...+...+...+..++ +. +++.++++
T Consensus 288 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~~ 345 (390)
T TIGR02718 288 ALLWFAQAAFWL----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTAV 345 (390)
T ss_pred HHHHHHHHHccc----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHHH
Confidence 322221111000 01233344444555666777777777777777665 55 88999999
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALL 255 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 255 (609)
+...++|..+||.++|++.+..||+..|++.+++.+++.+
T Consensus 346 ~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 346 QSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999989999999888776666544
No 169
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.11 E-value=7e-09 Score=111.29 Aligned_cols=172 Identities=15% Similarity=-0.023 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.++...+...+....++....+.|.|+.+++|.+..+.++......++..++.++.|+++||+ |||+.+..+.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344445544555555566667788888888999999999888878888899999999999995 9999999988877777
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
..++....... ..+.+.+.++.++.+++.+...+......... ++++ |++..+.++
T Consensus 295 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~~~ 350 (406)
T PRK15402 295 LLLAALATVIS-----------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAAMG 350 (406)
T ss_pred HHHHHHHHHcc-----------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHHHH
Confidence 77666541111 12355566777788888887776665554433 3355 899999999
Q ss_pred HHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHH
Q 039271 217 FFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIA 253 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~ 253 (609)
+...+|..+|+.+.+++.+..++....+..++..++.
T Consensus 351 ~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 351 MLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 9999999999999999988877665555544443333
No 170
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.11 E-value=2.7e-09 Score=115.11 Aligned_cols=148 Identities=11% Similarity=-0.011 Sum_probs=107.1
Q ss_pred HHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccC
Q 039271 70 LAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIK 149 (609)
Q Consensus 70 ~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (609)
...+.+..++|.|+.+ .|.+..+.+...+...++..++.++.|+++||+ |||+.+..+.++..++.++.... +.
T Consensus 245 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~--~~-- 318 (426)
T PRK12307 245 GANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI--PQ-- 318 (426)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH--cc--
Confidence 3444566788888875 699999999999999999999999999999995 99999988877665544433322 11
Q ss_pred CCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhh
Q 039271 150 PTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTI 229 (609)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i 229 (609)
.....+....+..+.+..+..+..+.++.|.+|++. |++++|+.+...++|+.++|.+
T Consensus 319 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~ 376 (426)
T PRK12307 319 ----------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMA 376 (426)
T ss_pred ----------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHH
Confidence 112112111222222233344566778899999888 9999999999999999999999
Q ss_pred hhhcccccchhHHHHH
Q 039271 230 LVYYEDSGKWTLGFLV 245 (609)
Q Consensus 230 ~~~l~~~~g~~~~f~~ 245 (609)
.|++.+..|+....++
T Consensus 377 ~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 377 ATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHcccHHHHHHH
Confidence 9999998887654333
No 171
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.11 E-value=2.7e-09 Score=110.23 Aligned_cols=161 Identities=13% Similarity=0.013 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHh--hCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRV--LQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
.++..++..++....-.++..|++.|+.+. +|+++.+.+...+.+..+..++.+++++++||+ |+||++.++.++.+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 444445555555545667788999999854 699999999999999999999999999999995 99999888877666
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++.++.... .+... ..+..+.|++.+.+.|...+...+.+|++.. ++ .++
T Consensus 220 ~~~~l~~~~----------------------~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-----~a--sai 269 (310)
T TIGR01272 220 LLSIGAALT----------------------HGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRHTS-----QG--SGI 269 (310)
T ss_pred HHHHHHHHc----------------------CCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hh--HHH
Confidence 655433332 11122 2355578999999999999999998886431 33 344
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHH
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLAS 249 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~ 249 (609)
. ....+|+.+.|.+.|.+.|..|.+.+|++..++
T Consensus 270 ~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 270 L-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred H-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3 456789999999999999989988888765544
No 172
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.10 E-value=3.8e-09 Score=112.45 Aligned_cols=171 Identities=12% Similarity=0.021 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
.+..+....+.+.+.+...++++.|+.+.+|.+..+.+++.+...++..++.++.|+++||+ |+|+.+..+..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 34444444444455555566778888888999999999999999999999999999999995 99999998887777766
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhh-ccCCCCChhhhhccchhHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGA-DQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
+++... . ++.+..++..++.+++.+...+....... +..+++. ++.. ..+
T Consensus 280 ~~~~~~--~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~ 330 (382)
T PRK10091 280 LMLFFF--G-------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GGQ 330 (382)
T ss_pred HHHHHH--H-------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HHH
Confidence 544332 0 22334444555555655544444343333 3333332 3332 345
Q ss_pred HHHhhhHHHHhhhhhhcccc-cchhHHHHHHHHHHHHHHHHHH
Q 039271 217 FFLNVGSLFSNTILVYYEDS-GKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
...++|..+||.++|++.+. .+|++.+.+.++..+++..+..
T Consensus 331 ~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 331 IAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 66789999999999999885 6899999988777666655443
No 173
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.10 E-value=3e-09 Score=113.78 Aligned_cols=170 Identities=14% Similarity=0.033 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh---CCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVL---QQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
++..++..++....+.....+.+.|+.+.+ +.+....+.+.++..+...++.+..|++.||+ |||+.+.++.++..
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 217 FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHH
Confidence 344444444444455555567788887665 45566778888888899999999999999995 99999998888777
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++..+.... .+.+.+.+..++.|++..........+..+.++++. +++..+.
T Consensus 296 l~~~~~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~ 347 (396)
T TIGR00882 296 VRIIGSSFA----------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLI 347 (396)
T ss_pred HHHHHHHhc----------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehH
Confidence 766554443 456667777888888776655555666677777665 6666665
Q ss_pred -HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 215 -FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 215 -~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
++...++|+.++|.++|++.+..||+.+|.+.+++.++..+.
T Consensus 348 ~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 348 GFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 677899999999999999999999999999988776655543
No 174
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.10 E-value=2e-09 Score=118.12 Aligned_cols=175 Identities=11% Similarity=-0.022 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH-----HHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYL-----TCAVFQLI 132 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-----~~~~~~~~ 132 (609)
.+.+.+..++.....+.+..++|.|+.+++|++..+++...+...++..++.+++|+++||+ |||+ .... .+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~-~~~ 331 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWAL-WIV 331 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHH-HHH
Confidence 34444444445555566677899999888999999999999999999999999999999995 8762 2221 111
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..++.+.+... +. ..+.+...+..++.+++.+...+...+++.+..| +. |+...
T Consensus 332 ~~l~~i~~~~~--~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 385 (476)
T PLN00028 332 QTLGGVFCIWL--GR-----------------ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVIS 385 (476)
T ss_pred HHHHHHHHHHh--cc-----------------cchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhh
Confidence 11111111111 10 0233444445555666655555556666666544 44 88888
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcC
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGT 261 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 261 (609)
++.+...++|+.++|.+.+ ..+..+|+..|++.+++.+++.++.++.+
T Consensus 386 g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 386 GLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 8887777777777776654 22335699999998877777776665543
No 175
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.09 E-value=1.3e-08 Score=112.75 Aligned_cols=203 Identities=13% Similarity=0.127 Sum_probs=147.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
-+..++....+......+......+-+.+.++++.++.|++.+.+-++..+...+..+.+-|. -|-|.+-+|.++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLG 175 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHH
Confidence 334444333343333346666677778899999999999999999999999999999999996 8999999999999999
Q ss_pred HHHHHHHhhhc-cC--------CCCCCC-----------------CC-CccC--CCcch-hHHHHHHHHHHHHHhhcCch
Q 039271 137 LVLLSVLSFLM-IK--------PTGCGD-----------------GF-ISCK--PLSSI-FAAIFYLSIYLIAFGYGGHQ 186 (609)
Q Consensus 137 ~~~~~~~~~~~-~~--------~~~~~~-----------------~~-~~~~--~~~~~-~~~~~~~~~~l~g~~~~~~~ 186 (609)
+++.++.-+.. .+ +.+.+. .. ..|+ ..... -+.+++++.++.|+|....+
T Consensus 176 sll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 176 SLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 98887652110 00 011111 01 1121 11222 24478888999999999999
Q ss_pred hhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc------------------ccc-hhHHHHHHH
Q 039271 187 PTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED------------------SGK-WTLGFLVSL 247 (609)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~------------------~~g-~~~~f~~~~ 247 (609)
+...+++-|...+++ -...+|+.+....+|.++|-++++++.. +.| ||..|++.+
T Consensus 256 tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g 329 (735)
T KOG3626|consen 256 TLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICG 329 (735)
T ss_pred cCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHH
Confidence 999999999887776 6688899888888998888888876532 123 888899998
Q ss_pred HHHHHHHHHHHhcCCccee
Q 039271 248 ASAVIALLSYLMGTPGYRY 266 (609)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~ 266 (609)
.+.++..+.++..++.+++
T Consensus 330 ~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 330 ALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHhCcccCcc
Confidence 8888888777776666543
No 176
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.07 E-value=7.1e-08 Score=104.04 Aligned_cols=362 Identities=17% Similarity=0.104 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhh-hhHHHHHH----HHHHHHHHhHHHHHhhhccchhHHHHHHHHHH
Q 039271 59 SILLANQGLATLAFFGVGVNLVLFLTRVLQQENAN-AANNVSKW----TGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIF 133 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~-~~~~~~~~----~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 133 (609)
..+.+...+.....+........+.....+.+... .+...... .+...+.+++-|.++||| |||..+.+..+..
T Consensus 24 ~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~ 102 (463)
T KOG2816|consen 24 EPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGT 102 (463)
T ss_pred HHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHH
Confidence 33344444444444444466666666555544322 34444444 678889999999999997 9999999998887
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHH--HhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIA--FGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
.+..+.+.+. . +.+++ +.+ -+.+...+...++++|....++ |...
T Consensus 103 ~l~~~~~~~~----------------------~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~ 149 (463)
T KOG2816|consen 103 ILPALCLLFQ----------------------G--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSS 149 (463)
T ss_pred HHhHHHHHHH----------------------H--HHHhh---hcccccchhhhhhhhhhheeeccchhH------HHHH
Confidence 7777666655 1 22222 222 2334456677888999988887 9999
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcceecCCCCC-ChhHHHHHHHHHHhhccc
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGYRYVKPCGN-PLPRVAQVFIAAARKWNV 290 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 290 (609)
+++.+.....+..++|.+++.+.+..|.-..|.++.+..+++.+......|+...++.... +.. .
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~--------------~ 215 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLR--------------E 215 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccc--------------c
Confidence 9999999999999999999999999999999999998888887766554444222211110 000 0
Q ss_pred ccCCCchhhhhhcCCcccccCccccccCchhhHHhhhhcccccCCCCCCCCCcccchhhHHHHHHHHhHHHHHHHHHHHH
Q 039271 291 VVPANSDELYEVAGPESAIKGSRKILHSNEIEFLDKAATITDNDLAGPKNPWKLCTVTQVEEAKCVLKMLPIWLCTIIYS 370 (609)
Q Consensus 291 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (609)
..|.+ .......+..+.. .+ .+..|..+. +.+ .......
T Consensus 216 ~~~~~-------------------~~~~~~~~~~~~~------------------~~--~~~~r~~l~-l~l-~~~~~~~ 254 (463)
T KOG2816|consen 216 LTPGS-------------------LDSSHVADAFQSL------------------TK--VGPDRLLLL-LLL-VAFLSSL 254 (463)
T ss_pred cCCCc-------------------ccchhhhhhhhhh------------------cc--cCCCccchH-HHH-HHHHHHH
Confidence 00000 0000000000000 00 011111111 111 1111111
Q ss_pred HHHhccc-ceeeEecccccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHH
Q 039271 371 VVFTQMA-SLFVEQGDVMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGML 449 (609)
Q Consensus 371 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~ 449 (609)
....... ..+......+......+..--........+..+++.+...+ .++ ..+.+..|+..-.+
T Consensus 255 ~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~-------~l~-------~~~~i~lGl~~~~~ 320 (463)
T KOG2816|consen 255 PEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSS-------ILG-------EKRLISLGLLSEFL 320 (463)
T ss_pred HHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHh-------hhhHhhHHHHHHHH
Confidence 1111111 11111101111110000101111222233333333333322 222 22357889999999
Q ss_pred HHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHH
Q 039271 450 AMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSS 529 (609)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~ 529 (609)
..+++++... .|+...............|...+++.....++.+|.++++......+++.+++
T Consensus 321 ~~~~~af~~~-----------------~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~ 383 (463)
T KOG2816|consen 321 QLLLFAFATE-----------------TWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSP 383 (463)
T ss_pred HHHHHHHhcc-----------------chhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhH
Confidence 9888888632 24545555666677778889999999999999999999999999999999999
Q ss_pred HHHHHhhhhcc
Q 039271 530 LLVVMVMGITA 540 (609)
Q Consensus 530 ~~~~~i~~~~~ 540 (609)
.+.+.+...+.
T Consensus 384 ~~~~~i~~~t~ 394 (463)
T KOG2816|consen 384 ALYGNIFALTL 394 (463)
T ss_pred HHHHHHHHHHH
Confidence 99988876553
No 177
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.06 E-value=9.6e-09 Score=110.17 Aligned_cols=157 Identities=15% Similarity=0.150 Sum_probs=108.5
Q ss_pred HHHHHHHHHhhCCchhhhhHHHHHHH-HHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 039271 77 VNLVLFLTRVLQQENANAANNVSKWT-GTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGD 155 (609)
Q Consensus 77 ~~~~~yl~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (609)
.+.+.|+.+++|.+..+.+++.+... ++..++.+++|++.||+ |||+.+..+.++..+..+.+......
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~--------- 299 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVT--------- 299 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 34455677789999999999886654 46888999999999995 99998877776665554433322110
Q ss_pred CCCccCCCcchhHHHHHHHHH----HHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhh
Q 039271 156 GFISCKPLSSIFAAIFYLSIY----LIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILV 231 (609)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~----l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~ 231 (609)
..+.+.+++..+ ..+++.+...+....++.+.+|.++ .+.+....++|..+++.++|
T Consensus 300 ---------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 300 ---------PKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----------YALLSALASVGRVYVGPTSG 360 (402)
T ss_pred ---------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----------HHHHHHHHHHHHHHHHHHHH
Confidence 022344444443 3455566666777777777777544 45555556777776777899
Q ss_pred hcccccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 232 YYEDSGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 232 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
++.+.+||+..|.+.+++.++++++.+..++
T Consensus 361 ~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 361 YLVEAYGWPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998888777666544333
No 178
>PRK10054 putative transporter; Provisional
Probab=99.06 E-value=2.3e-09 Score=114.67 Aligned_cols=173 Identities=12% Similarity=-0.061 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHH--hhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTR--VLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
.++...+..++..+.+.....+.+.|+.. +.+.+....+++.....+......++.|++.||+ ++|+.+..+.++..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 34444444555555544444566666643 3455666677888888777778888999999995 99999988887777
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
++...+.+. ..+.+.+.++..+.++|.+...|...+++.+..|++. |++.++.
T Consensus 286 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~ 338 (395)
T PRK10054 286 IGLVGFIFS---------------------GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSA 338 (395)
T ss_pred HHHHHHHHc---------------------chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhH
Confidence 776655443 1345556667788899988888888899999999887 7888876
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
.+ ...+|..+||.++|++.|..|....|++.+....++.+...
T Consensus 339 ~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 339 QS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 54 56689999999999999999988888887666665555444
No 179
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.05 E-value=3e-09 Score=115.08 Aligned_cols=161 Identities=18% Similarity=0.101 Sum_probs=119.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.++.+++..++...+++....+.+.|.+..++ +....+++.+...++..++.++.|+++||+ |||+++..+.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 345556666666666666655555555554455 456677788888999999999999999995 999999999887777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChh-hhhccchhHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPK-ERQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~ 214 (609)
+.+.+.+. +.+.+.+.+..++.+++.+...+..+++++|..|.++-+ .++.+|..+++
T Consensus 300 ~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 358 (437)
T TIGR00792 300 GYLIFFFA---------------------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSV 358 (437)
T ss_pred HHHHHHHc---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHH
Confidence 76655443 123455666777788999998999999999987743211 01116888999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccch
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKW 239 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~ 239 (609)
+++...+|..+++.+.|++.+..||
T Consensus 359 ~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 359 RTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999998876665
No 180
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.04 E-value=2.2e-09 Score=117.83 Aligned_cols=156 Identities=15% Similarity=0.109 Sum_probs=126.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.++..++..++..+.+++...++|.|+++.+|.+..++++......++..++.+++|++.||+ |||+++..+.++..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3455556666777788888888999999999999999999999999999999999999999995 999999988887777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+..++.....+. .+.+.+....++.|+|.+...+.......+.+|+++ |+.+.+++
T Consensus 334 ~~~~~~~~~~~~------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~ 389 (485)
T TIGR00711 334 GFYWRAFTFTPD------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLS 389 (485)
T ss_pred HHHHHhccCCCC------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHH
Confidence 776655321111 234555666778899998888777777788888877 99999999
Q ss_pred HHHHhhhHHHHhhhhhhcccc
Q 039271 216 YFFLNVGSLFSNTILVYYEDS 236 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~ 236 (609)
+...++|+.+|+.+.+.+.++
T Consensus 390 ~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 390 NFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998877664
No 181
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.04 E-value=6e-09 Score=114.63 Aligned_cols=172 Identities=15% Similarity=0.109 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
+..++...++.++....+...+|.+..+.+|.+....|++.+...++..++.++.+++.+|+ ++++.+..+.+++.++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 33334444444444444556788888899999999999999999999999999999999995 99999988888877777
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
+.+++. .+.+...+..++.|++.........+.+.+..|++. ||+.++++++
T Consensus 299 ~~lal~----------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~ 350 (524)
T PF05977_consen 299 LLLALS----------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQM 350 (524)
T ss_pred HHHhcc----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHH
Confidence 777666 667788888888999988888888899999999998 9999999999
Q ss_pred HHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 039271 218 FLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 218 ~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
..+.+..+|..+.|.+.+.+|.+..+.++++..+++.++..
T Consensus 351 ~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 351 VFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888776655555443
No 182
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.04 E-value=2.1e-07 Score=95.10 Aligned_cols=152 Identities=13% Similarity=0.064 Sum_probs=109.0
Q ss_pred HhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCc
Q 039271 85 RVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLS 164 (609)
Q Consensus 85 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (609)
+++|++..+++.+.........+..++.|.++||+ |||+..+...+++.+.++.--.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~---------------------- 118 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS---------------------- 118 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc----------------------
Confidence 57899999999999999999999999999999996 9999999998888887753322
Q ss_pred chhHHHHHHHHHHHHHhhcCchhhhhhh-hhccCCCCChhhhhccchhHHHHH-HHHhhhHHHHhhhhhhcccccc--hh
Q 039271 165 SIFAAIFYLSIYLIAFGYGGHQPTLATF-GADQFDESKPKERQSKTLFFCYFY-FFLNVGSLFSNTILVYYEDSGK--WT 240 (609)
Q Consensus 165 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~-~~~~ig~~~~~~i~~~l~~~~g--~~ 240 (609)
.+++.++++|++.|++......+.-+- +.|.-..+.+++- .+..++... +.+.+-++.+.+++-++.+..+ ..
T Consensus 119 -~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~--L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~v 195 (354)
T PF05631_consen 119 -SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW--LSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPV 195 (354)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH--HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCc
Confidence 568999999999999999887766553 3343222111111 334444444 3344555666667767766554 47
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC
Q 039271 241 LGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 241 ~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
.+|..+..+.+++.+++....+
T Consensus 196 aPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 196 APFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred chHHHHHHHHHHHHHHHHhccc
Confidence 8898888877777665544333
No 183
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.03 E-value=1.7e-08 Score=106.95 Aligned_cols=163 Identities=10% Similarity=0.070 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
++...+...+....++....+.|.|+.+++|.++.+++++.....++..++.++.|+++||+ |||+.+..+..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 34444444455556666777788888889999999999999999999999999999999995 99999988877777766
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
+++.....+. ......+++..++.|++.+...+.......|.+| ++ |++..++++.
T Consensus 287 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~ 342 (385)
T TIGR00710 287 VLLEITAILG-----------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFGT 342 (385)
T ss_pred HHHHHHHHhc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHHH
Confidence 6555442111 0223445555667888888888888888888776 45 7888888777
Q ss_pred HHhh-hHHHHhhhhhhcccccchhHHHHHH
Q 039271 218 FLNV-GSLFSNTILVYYEDSGKWTLGFLVS 246 (609)
Q Consensus 218 ~~~i-g~~~~~~i~~~l~~~~g~~~~f~~~ 246 (609)
.... |+..+|+ .+.+.+..+|...+...
T Consensus 343 ~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~ 371 (385)
T TIGR00710 343 LRLVLGAIVGYL-VSLIHGNTAWPMSLSCL 371 (385)
T ss_pred HHHHHHHHHHHH-HHhccccChHHHHHHHH
Confidence 6654 5555554 44555545555444443
No 184
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.03 E-value=4.3e-09 Score=116.35 Aligned_cols=170 Identities=15% Similarity=0.093 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhH------------HHHHHHHHHHHHHhHHHHHhhhccchhHHHHHH
Q 039271 62 LANQGLATLAFFGVGVNLVLFLTRVLQQENANAAN------------NVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVF 129 (609)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~ 129 (609)
....++..+.+|++..+.|.+++ +.|++..+.+. ...+..++..++.+++++++||+ |||++++.+
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~ 371 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMG 371 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHH
Confidence 33445566778888888888875 57876543221 12233445556778899999995 999999888
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccc
Q 039271 130 QLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKT 209 (609)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 209 (609)
.++..++.+++.+..... ..+ ..+....+...++..+..+..+.+.+|.+|++. |+
T Consensus 372 ~~~~~~~~~~l~~~~~~~-----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~ 427 (502)
T TIGR00887 372 FFILTVLFFVLGFAYNHL-----------------STH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RS 427 (502)
T ss_pred HHHHHHHHHHHHHHHHhc-----------------chh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HH
Confidence 877776665555431110 011 111111111222223345667788899999999 99
Q ss_pred hhHHHHHHHHhhhHHHHhhhhhhcccc----------cchhHHHHHHHHHHHHHHHHH
Q 039271 210 LFFCYFYFFLNVGSLFSNTILVYYEDS----------GKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 210 ~~~~~~~~~~~ig~~~~~~i~~~l~~~----------~g~~~~f~~~~~~~~~~~~~~ 257 (609)
++.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+.+
T Consensus 428 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 428 TAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT 485 (502)
T ss_pred HHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988773 344556666666655554444
No 185
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.03 E-value=4e-09 Score=116.38 Aligned_cols=154 Identities=10% Similarity=-0.050 Sum_probs=127.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.+...++..++....+++...+++.|+++.+|.++.+++.......++..++.++.|++.||+ |||+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3455566667777777888888999999999999999999999999999999999999999995 999999888887777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+.+++.... . ..+.+..++..++.|+|.|...+.....+.+..|+++ ++.+.+++
T Consensus 338 ~~~~l~~~~-~------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~ 392 (495)
T PRK14995 338 SFYGLAMTD-F------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIE 392 (495)
T ss_pred HHHHHHHhc-C------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHH
Confidence 766554431 0 1234455667788899999988888888889899888 89999999
Q ss_pred HHHHhhhHHHHhhhhhhccc
Q 039271 216 YFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~ 235 (609)
++..++|+.+|+.+.|.+.+
T Consensus 393 ~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 393 TMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887754
No 186
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.02 E-value=1.1e-08 Score=112.10 Aligned_cols=160 Identities=11% Similarity=0.020 Sum_probs=112.2
Q ss_pred hHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 039271 75 VGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCG 154 (609)
Q Consensus 75 ~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (609)
...+.|. +.++.|.+.....+......+...++.+++|+++||+ |||++++.+.++.+++.+++.......
T Consensus 290 ~~~~~p~-i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~------- 360 (479)
T PRK10077 290 VLYYAPE-IFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ------- 360 (479)
T ss_pred HHHHHHH-HHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC-------
Confidence 3334444 4456888877777777778888999999999999995 999999999998888777665441111
Q ss_pred CCCCccCCCcchhHHHHHHHHHHHHHhhcC-chhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhh--
Q 039271 155 DGFISCKPLSSIFAAIFYLSIYLIAFGYGG-HQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILV-- 231 (609)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~-- 231 (609)
.... ....+.++.+.+.+. ..|..+.+++|.+|+++ |+.+.++.+...++|..+++.+.+
T Consensus 361 ----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 361 ----------APGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred ----------cccH-HHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0111 222333344444433 34677899999999888 999999998888888887755554
Q ss_pred ----hcccccchhHHHHHHHHHHHHHHHHHHhc
Q 039271 232 ----YYEDSGKWTLGFLVSLASAVIALLSYLMG 260 (609)
Q Consensus 232 ----~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 260 (609)
++.+..+|++.|++.++..+++.++.+..
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 424 DKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred HhccchhhhccCccHHHHHHHHHHHHHHHHHhc
Confidence 44467888888888776666655554443
No 187
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.00 E-value=6.3e-09 Score=109.49 Aligned_cols=153 Identities=14% Similarity=0.053 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
..+.+++...+....++....++|.|+++ .|.+..+.+.+.+...++..++.++.|+++||+-+||+.+..+.++..++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Confidence 44555555566677778888899999875 79999999999999999999999999999999514566666776666666
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
.+.+... .+... ....++.|++.+...|...+.+.+..++++. ++...++.+
T Consensus 277 ~~~~~~~----------------------~~~~~-~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~ 328 (355)
T TIGR00896 277 LCGLLFA----------------------PMHGL-WAWALVLGLGQGGAFPLALTLIGLRSRQAAQ-----AAALSAMAQ 328 (355)
T ss_pred HHHHHHh----------------------hhhHH-HHHHHHHHHhhhhHhHHHHHHHHHhccCHHH-----HHHHHHHHH
Confidence 6555443 11111 1234678999999888877777766554321 677788888
Q ss_pred HHHhhhHHHHhhhhhhcccccc
Q 039271 217 FFLNVGSLFSNTILVYYEDSGK 238 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g 238 (609)
...++|..++|.+.|++.+..|
T Consensus 329 ~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 329 SIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 8888999999999999988765
No 188
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.99 E-value=3.3e-08 Score=105.78 Aligned_cols=167 Identities=8% Similarity=-0.048 Sum_probs=118.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.++..++..++....+++...++++++.+++|++..+.+.+.....++..++.++.|++.||. +|+ .++.+.++..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~~ 294 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHHH
Confidence 344444444444455555556664555567899999999999999999999999999999994 544 444443333333
Q ss_pred -HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 137 -LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
.++.... .+.+.+.+..++.|++.+...+...+++.+..|+ + +++..+.+
T Consensus 295 ~~~l~~~~----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~ 345 (394)
T PRK10213 295 ALVLTLWG----------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKAGSIQ 345 (394)
T ss_pred HHHHHHHh----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHHHHHH
Confidence 3332222 3456677778888999999898888888888773 3 34556666
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIAL 254 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 254 (609)
....++|..+||.++|++.+..|++..++..++..++..
T Consensus 346 ~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 346 VAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 677889999999999999999999888888776544433
No 189
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.98 E-value=2.3e-08 Score=107.73 Aligned_cols=184 Identities=12% Similarity=0.015 Sum_probs=124.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
..|.+.+..++...+|.++..++|.|+++.+. .........+..+...+..|++|+|+||+ |+||++.++.+...++
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHH
Confidence 45767777777777777777799999887553 33333345556788999999999999995 9999999988776665
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCC---------------
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESK--------------- 201 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--------------- 201 (609)
....... .|. ....+++.+.+..+...++.|.-+.....++.+.||+++
T Consensus 330 ~~~~~l~-lp~---------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~ 393 (462)
T PRK15034 330 SALLFLT-LPG---------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQ 393 (462)
T ss_pred HHHHHHH-hcc---------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHh
Confidence 5433332 121 001345666666655566666667777788888887410
Q ss_pred hhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHh
Q 039271 202 PKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 202 ~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.+.|+.-|...|+......+|+++-|.+-|...+..| +...|+...+..+++.++.+.
T Consensus 394 ~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 394 REAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 0111125577778888888999999988777766654 777888777666666555443
No 190
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.97 E-value=9.4e-09 Score=106.32 Aligned_cols=176 Identities=15% Similarity=0.118 Sum_probs=146.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+.+...+++.++.+=+.-.+......|....+|++..+...+.....+...+++++.|+|.||+ |-|+++..++++..+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3566666666666666667778888999999999999999999999999999999999999995 999999999998887
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
.++...+. .....+++.-.+.|+..|+.++.+=++.+++.|+++ -++.+|+|
T Consensus 331 ~~~~~~~~----------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFgly 382 (438)
T COG2270 331 AALYLIFL----------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLY 382 (438)
T ss_pred HHHHHHHc----------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehh
Confidence 77665554 224456666677899999999999999999999998 78899999
Q ss_pred HHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHhc
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLMG 260 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~ 260 (609)
+...-..+.+||.+.+.+.+.+| -|..+....++.+++++.++..
T Consensus 383 altgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 383 ALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence 99999999999999999988765 6777777777777777665443
No 191
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.97 E-value=1.3e-08 Score=109.03 Aligned_cols=153 Identities=14% Similarity=0.054 Sum_probs=111.4
Q ss_pred hHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 039271 75 VGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCG 154 (609)
Q Consensus 75 ~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (609)
...++|.|+++..+ ++.+.+++.+...+.......+.+++.||.++.++.+..+.++..++..++...
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~----------- 294 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV----------- 294 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-----------
Confidence 44677888876555 668888888887776665555556666553476777777776666666555544
Q ss_pred CCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcc
Q 039271 155 DGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYE 234 (609)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~ 234 (609)
++.+.+++..++.+++.+...|...+++.|..|+++ |++.+++++...++|..+||.++|++.
T Consensus 295 -----------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 295 -----------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred -----------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHHH
Confidence 345556666677888888888888999999999988 999999999999999999999999998
Q ss_pred ccc---c-hhHHHHHHHHHHHHHHHH
Q 039271 235 DSG---K-WTLGFLVSLASAVIALLS 256 (609)
Q Consensus 235 ~~~---g-~~~~f~~~~~~~~~~~~~ 256 (609)
+.. + ....|++.++..+++.+.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 358 DLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 763 2 345565555555555444
No 192
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.96 E-value=3.2e-08 Score=104.81 Aligned_cols=167 Identities=14% Similarity=-0.016 Sum_probs=114.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchh---HHHHH-HHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRY---LTCAV-FQL 131 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr---~~~~~-~~~ 131 (609)
|.++.+.+..++....+|++..|+|.|+++ .|++.. .+....+..+...++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 456888888899999999999999999964 677754 555555555544444 57888884 543 33222 222
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 132 IFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
+..+....+... .+....++...+.+++.....+..+++.+|.+|++. |+++
T Consensus 266 ~~a~~~~~~~~~----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~ 317 (368)
T TIGR00903 266 LIAAFFLALAFE----------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKA 317 (368)
T ss_pred HHHHHHHHHHHc----------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcc
Confidence 222222222221 122333444555666677777778899999999999 9999
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 258 (609)
.|+.+...++|+..+|.+.+.+.. |....|.+.++..+++.+..+
T Consensus 318 ~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 318 AGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887763 666777777766666655543
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.96 E-value=1.4e-08 Score=123.50 Aligned_cols=164 Identities=15% Similarity=0.039 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchh-hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENA-NAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
.++.+++..++.....+.+..+++.|+.+.+|.+.. ..+++.+...++..++.+++|+++||+ ++++++.++.++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence 344444445555555566678889999999999998 999999999999999999999999995 999988888777776
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+.+++.+. .+.+.+++..++.|++.++..+...+++.+.+|++. |++++++.
T Consensus 312 ~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~ 363 (1146)
T PRK08633 312 SLFLLPTA----------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAAN 363 (1146)
T ss_pred HHHHHHHh----------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHH
Confidence 66666554 356667777888899999888888999999999988 99999999
Q ss_pred HHHHhhhHHHHhhhhhhccc-ccchhHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYED-SGKWTLGFLVSLAS 249 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~-~~g~~~~f~~~~~~ 249 (609)
++..++|.++++.+++.+.. .+++...|++.+++
T Consensus 364 ~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 364 NFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999888877776644 23455556554443
No 194
>PRK10133 L-fucose transporter; Provisional
Probab=98.95 E-value=2.7e-08 Score=107.94 Aligned_cols=165 Identities=11% Similarity=0.079 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHH-HHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q 039271 61 LLANQGLATLAFFGVGVNLVLFL-TRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVL 139 (609)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~yl-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 139 (609)
..+..++.....++...|.+.|+ ++.+|+++.++++....+.++..++.+++|++.||+ |||+++..+.++.+++.++
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~ 341 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 34444555566666667888896 567899999999999999999999999999999995 9999998887766555544
Q ss_pred HHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHH
Q 039271 140 LSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFL 219 (609)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 219 (609)
..+. .+. ..+....+.|++.+...|...+...+.+|++. +.+.++... .
T Consensus 342 ~~~~----------------------~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~l~~~-~ 390 (438)
T PRK10133 342 SAFA----------------------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSSFIVM-T 390 (438)
T ss_pred HHHc----------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchhHHhH-H
Confidence 3332 111 12445667899999999999999999887532 233444433 3
Q ss_pred hhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHH
Q 039271 220 NVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 220 ~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~ 257 (609)
.+|+.++|.+.|++.+..| -+..|++..++.+...+..
T Consensus 391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~~ 429 (438)
T PRK10133 391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFA 429 (438)
T ss_pred hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 3678888889999988887 7888887766655444433
No 195
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.94 E-value=1e-10 Score=128.85 Aligned_cols=196 Identities=14% Similarity=0.108 Sum_probs=2.9
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 039271 64 NQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVL 143 (609)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~ 143 (609)
..+.. ....++.....+-+++.++++.+++|++.+.+-++..+..++..++.+|. .|-|.+..|.++..+|++++++.
T Consensus 11 ~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lP 88 (539)
T PF03137_consen 11 LGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALP 88 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhcc
Confidence 33334 55555555666678899999999999999999999999999999999994 88889999999999999888765
Q ss_pred hhhcc-CCC------CCCC-C-CCcc-----------------C--CCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhc
Q 039271 144 SFLMI-KPT------GCGD-G-FISC-----------------K--PLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGAD 195 (609)
Q Consensus 144 ~~~~~-~~~------~~~~-~-~~~~-----------------~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 195 (609)
-+... +.. .++. + ...| + .........++++.++.|+|....++...+++-|
T Consensus 89 hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD 168 (539)
T PF03137_consen 89 HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD 168 (539)
T ss_dssp ---------------------------------------------------------------SSS--------------
T ss_pred HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc
Confidence 32110 100 0000 0 1122 1 1112235788899999999999999999999999
Q ss_pred cCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc---------------------ccc-hhHHHHHHHHHHHHH
Q 039271 196 QFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED---------------------SGK-WTLGFLVSLASAVIA 253 (609)
Q Consensus 196 ~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~---------------------~~g-~~~~f~~~~~~~~~~ 253 (609)
..+++. -+..+|+++....+|.++|.++++.+.. +.| |+..|++.+++.++.
T Consensus 169 nv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ 242 (539)
T PF03137_consen 169 NVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLS 242 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999887 6788889999999999999888875532 123 888888888777776
Q ss_pred HHHHHhcCCcceec
Q 039271 254 LLSYLMGTPGYRYV 267 (609)
Q Consensus 254 ~~~~~~~~~~~~~~ 267 (609)
.+.++..+++.++.
T Consensus 243 aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 243 AIPLFFFPKKLPGT 256 (539)
T ss_dssp --------------
T ss_pred HHHHHcCCccCCCc
Confidence 66666666655443
No 196
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1.9e-08 Score=110.22 Aligned_cols=176 Identities=16% Similarity=0.088 Sum_probs=146.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH--HHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYL--TCAVFQLIF 133 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~--~~~~~~~~~ 133 (609)
+.++.+.+...+..++++....+++.|.. ..+.+..+++..+++..+...++.++.|+++|+. ..++ +..++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 56777888888888888888889999877 7999999999999999999999999999999995 6334 344444444
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+.+.+. ++++.++..-++.|+..|...+.....+.|+.+.++ ...++|
T Consensus 376 gl~~~~~p~~----------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~G 427 (509)
T KOG2504|consen 376 GLARLFLPFA----------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYG 427 (509)
T ss_pred HHHHHHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHH
Confidence 4444444444 567788888888999999999888889999999988 889999
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVIALLSYLMGT 261 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 261 (609)
+......++.++||.++|++.|..| |...|+..+++.+++..+++..+
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999999887 99999999988888877665544
No 197
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.91 E-value=2.5e-08 Score=107.91 Aligned_cols=162 Identities=22% Similarity=0.199 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.+..+++..++..+++....+..+-|.+..+|.+ ...+.+.....+...++.++.++++||+ |+|+++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 45666677777777777766677777777777777 5667888889999999999999999995 999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhh-hhccchhHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKE-RQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~ 214 (609)
+.+++.+. + ..+.+.+++..++.|++.+...+..+++++|..+.++.+. ++..|..++.
T Consensus 303 ~~~~~~~~--~------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~ 362 (428)
T PF13347_consen 303 GFLLLFFL--G------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSV 362 (428)
T ss_pred HHHHHHHH--H------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHh
Confidence 88877776 1 1367888889999999999999999999999998654321 1225677888
Q ss_pred HHHHHhhhHHHHhhhhhhcccccch
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKW 239 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~ 239 (609)
+.+...+|..+++.+.+.+.+..|+
T Consensus 363 ~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 363 NSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999988877654443
No 198
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.90 E-value=9.5e-08 Score=101.16 Aligned_cols=149 Identities=8% Similarity=-0.026 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
.+..++...+...+.+.+..+.+.++.+.+|.+..+.+++.....++..++.+++|+++||+ |||+++..+.++..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 34444445555555666666777788888999999999999999999999999999999995 99999998887655443
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
+.+....... .+.+...++..+.+.+.+...+.....+.|..| +. +++..+.++.
T Consensus 275 ~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~ 329 (377)
T PRK11102 275 IWLVVSALLD------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGT 329 (377)
T ss_pred HHHHHHHHHh------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHH
Confidence 3332221111 223444444444444555555566666777766 55 7777777554
Q ss_pred H-HhhhHHHHhhhhhh
Q 039271 218 F-LNVGSLFSNTILVY 232 (609)
Q Consensus 218 ~-~~ig~~~~~~i~~~ 232 (609)
. ..+|+..++.+++.
T Consensus 330 ~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 330 LRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3 45677777766543
No 199
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.90 E-value=2.8e-08 Score=104.58 Aligned_cols=145 Identities=15% Similarity=0.059 Sum_probs=109.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHH-HHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWT-GTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
.++.+++..++.+..++...++++.|+.+ +|.+..+.+.+.+... +...++.+++|+++||+ |||+.+..+.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 45666666677788888888999999986 8999999998887765 57789999999999995 999998888877766
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+..+..+.. +...... ....+.+.+....++.+++.+...+...+++.|.+|+++ |++.++++
T Consensus 288 ~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 350 (356)
T TIGR00901 288 TNAGFVWLA-SNGHHDG----------ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALL 350 (356)
T ss_pred HHHHHHHHH-hcCcccc----------cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHH
Confidence 555443321 0000000 000234566677778899999999999999999999999 99999998
Q ss_pred HHHHh
Q 039271 216 YFFLN 220 (609)
Q Consensus 216 ~~~~~ 220 (609)
+...|
T Consensus 351 ~~~~~ 355 (356)
T TIGR00901 351 SSLSA 355 (356)
T ss_pred HHHHh
Confidence 77665
No 200
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.89 E-value=2.1e-08 Score=108.54 Aligned_cols=177 Identities=10% Similarity=0.016 Sum_probs=119.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccch--------hHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGR--------YLTCA 127 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--------r~~~~ 127 (609)
+.+|.+.+..++.+.+++.+..+.|.|+.+.+|++..+.|+..++..+...+..+++|.++||. -+ ||.+-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l-~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRL-TFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchHhHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999996 33 22221
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhc
Q 039271 128 VFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQS 207 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (609)
. ......+..++.+...+. .+.+..++...+.-...|...+-...-..|..| +.
T Consensus 337 ~-i~~~~~ai~l~~l~~~~~------------------~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~------ 390 (466)
T KOG2532|consen 337 T-IAFGGPAVFLLVLAFTSD------------------EHRLLAVILLTIAIGLSGFNISGFYKNHQDIAP-QH------ 390 (466)
T ss_pred h-HHHHHHHHHHHeeeecCC------------------CcchHHHHHHHHHHHHcccchhhhHhhhhhccc-hH------
Confidence 1 111112222222211111 111111111111111122222222232333333 33
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhhhcccc---cchhHHHHHHHHHHHHHHHHHHh
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILVYYEDS---GKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
-+..+++.+...++.++++|.+.+.+... ..|+.+|++.++..+++.+++.+
T Consensus 391 a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 391 AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 66889999999999999999999999842 36999999999888887766544
No 201
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.88 E-value=8.4e-08 Score=102.62 Aligned_cols=158 Identities=10% Similarity=-0.129 Sum_probs=116.5
Q ss_pred HHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 039271 69 TLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMI 148 (609)
Q Consensus 69 ~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (609)
+.........++.|+++.+|.++.+.|++.+...++..++.++.+++.||+ ++|+++..+.. ..+..+.+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~----- 290 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQ----- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHH-----
Confidence 334444555667788888999999999999999999999999999999995 99988877743 23332222222
Q ss_pred CCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhh
Q 039271 149 KPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNT 228 (609)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 228 (609)
.+.+...+..++.|++.+...+...+.+.+..|++. ++|+..++.+...++|..++..
T Consensus 291 -----------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~ 348 (393)
T PRK11195 291 -----------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLG 348 (393)
T ss_pred -----------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHH
Confidence 345555666777888888888888888877644332 1688899999999999999998
Q ss_pred hhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 229 ILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 229 i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
+.+.+ +..|-+..+++.++..+..+..
T Consensus 349 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 349 LYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 88865 5678777777766555554443
No 202
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.88 E-value=2e-08 Score=101.33 Aligned_cols=170 Identities=12% Similarity=0.092 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh--C-----------------CchhhhhHHHHHHHHHHHHHHhHHHHHhhh
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVL--Q-----------------QENANAANNVSKWTGTVYMCSLIGAFLSDS 118 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~--g-----------------~~~~~~~~~~~~~~~~~~~~~~~~G~laDr 118 (609)
-+.+....+.+.+.||++.-......+.+. + .+...--.-+.+.++.-+-+.++.+++.||
T Consensus 328 tlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iver 407 (528)
T KOG0253|consen 328 TLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVER 407 (528)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHH
Confidence 344555667788888887544332222110 0 111111122344567778899999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCC
Q 039271 119 YWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFD 198 (609)
Q Consensus 119 ~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 198 (609)
+|||+++..+.+++.+..+++..+-.++ ....+++.+|+.+. +...+.+.+-.|.+|
T Consensus 408 -lGRKkTMal~l~~f~iflfll~~c~~rn------------------~~tvllf~arafis----g~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 408 -LGRKKTMALSLILFGIFLFLLTTCKTRN------------------AYTVLLFTARAFIS----GAFQVAYVYTPEVYP 464 (528)
T ss_pred -hcchhHHHHHHHHHHHHHHHHHHhcCcc------------------hhHHHHHHHHHHHh----chheEEEEecCcccc
Confidence 5999999999999988888777662222 12334555666554 334466788999999
Q ss_pred CCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 039271 199 ESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 199 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
+.. |+.+.|......-+|+++.|.++ ...+..-.-..++..+++.+.++.++
T Consensus 465 Tav------RatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavc 516 (528)
T KOG0253|consen 465 TAV------RATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVC 516 (528)
T ss_pred hhh------hhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHhe
Confidence 999 99999999999999999999998 33222223344555555544444443
No 203
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.87 E-value=3.6e-08 Score=119.91 Aligned_cols=185 Identities=13% Similarity=-0.050 Sum_probs=132.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+.++.+++..++.++.++.+..++|.|+.+.+|.+....+++.+...++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4566666666677777777888999999999999999999999999999999999999999985 777766666555544
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+.+.+.+........+...- +..+ -....+.+.++++.++.|++.+...+...+++.+.+|++. ||+.+|..
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~ 375 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLK-SILV-FLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAAN 375 (1140)
T ss_pred HHHHHHhccccccccccccc-chhh-hhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHH
Confidence 44433321000000000000 0000 0001335667777888899999999999999999999999 99999999
Q ss_pred HHHHhhhHHHHhhhhhhccc-ccchhHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYED-SGKWTLGFLVSLAS 249 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~-~~g~~~~f~~~~~~ 249 (609)
++..++|..+++.+.+.+.+ ..++...|++.+++
T Consensus 376 ~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 376 NVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999999999988864 45666666555443
No 204
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.86 E-value=8.4e-09 Score=107.59 Aligned_cols=142 Identities=25% Similarity=0.325 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhhCCc-hhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 039271 60 ILLANQGLATLAFFGVGVNLVLFLTRVLQQE-NANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLV 138 (609)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 138 (609)
.++...+...+.++....+++.|+.+++|.+ ..+.+.+.+...+...++.++.|+++||+ |+|+..........++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 288 (352)
T PF07690_consen 210 ILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGAL 288 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHH
Confidence 3444455555566678889999989999999 89999999999999999999999999995 988887777766655555
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
.+.+... ..+....+...++.|++.+...+...+++.|.+|+++ |++..++++..
T Consensus 289 ~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~ 343 (352)
T PF07690_consen 289 GLLLLPF-------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSI 343 (352)
T ss_dssp HHCCSHH-------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHH
T ss_pred HHHHHHH-------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHH
Confidence 4443311 1234556667777899999999999999999999888 99999999999
Q ss_pred HhhhHHHHh
Q 039271 219 LNVGSLFSN 227 (609)
Q Consensus 219 ~~ig~~~~~ 227 (609)
.++|+.+||
T Consensus 344 ~~~~~~igP 352 (352)
T PF07690_consen 344 GSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHCC
Confidence 999999987
No 205
>TIGR00898 2A0119 cation transport protein.
Probab=98.84 E-value=3.1e-08 Score=109.51 Aligned_cols=133 Identities=20% Similarity=0.104 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHH
Q 039271 98 VSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYL 177 (609)
Q Consensus 98 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 177 (609)
.....+....+.+++++++||+ |||+++.++.++..++.+++.+. +. ...+...+..++
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~--~~------------------~~~~~~~~~~~~ 419 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFV--PV------------------DLYFLRTALAVL 419 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHc--CC------------------CchHHHHHHHHH
Confidence 3445667778889999999995 99999999888777776655554 11 112334444455
Q ss_pred HHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 039271 178 IAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 178 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
.+++.+...+..+.+.+|.+|++. |++++++.+....+|++++|.+.+ +. ..++..++++.++..+++.++.
T Consensus 420 ~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 491 (505)
T TIGR00898 420 GKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILT 491 (505)
T ss_pred HHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHH
Confidence 666667777888899999999988 999999999999999999999988 43 3556667777666665555544
Q ss_pred Hh
Q 039271 258 LM 259 (609)
Q Consensus 258 ~~ 259 (609)
++
T Consensus 492 ~~ 493 (505)
T TIGR00898 492 LF 493 (505)
T ss_pred Hc
Confidence 44
No 206
>PRK09848 glucuronide transporter; Provisional
Probab=98.83 E-value=4.5e-08 Score=106.60 Aligned_cols=163 Identities=12% Similarity=0.115 Sum_probs=120.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.+...++..++...+++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 3455556666666666666666677777777887766555545545667788999999999995 999999999988887
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhh-hhccchhHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKE-RQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~ 214 (609)
+.+++.+. +. .+.+.+++..++.++|.+...+...++.+|..|.++.+. ++.+|..++.
T Consensus 307 ~~~~~~~~--~~------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~ 366 (448)
T PRK09848 307 GYLLFFWV--SV------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSL 366 (448)
T ss_pred HHHHHHHc--Cc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHH
Confidence 77666543 11 345666677778899999999999999999887653210 1115788889
Q ss_pred HHHHHhhhHHHHhhhhhhcccccch
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKW 239 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~ 239 (609)
+++...+|..+|+.+.+.+.+..||
T Consensus 367 ~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 367 FSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999998877654444
No 207
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.82 E-value=1.6e-07 Score=100.30 Aligned_cols=69 Identities=12% Similarity=0.054 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 039271 74 GVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVL 143 (609)
Q Consensus 74 ~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~ 143 (609)
....+.+.|+.+++|++..+.+...+...++..++.++.|++.||+ |||+.+..+.++..++.+++.+.
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567788888999999999999999999999999999999995 99999999988877777766655
No 208
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.81 E-value=2.4e-07 Score=99.58 Aligned_cols=188 Identities=14% Similarity=0.095 Sum_probs=125.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+.+.+.+...++..+.-.....+..+.+-++-|++..++.++.....+...+..+++.++.||+ |||+.++.+..+..+
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAV 347 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHH
Confidence 3445555555555444444444555666667899999999999999999999999999999995 999999999999888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhc-CchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYG-GHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
..+++......... ....-.+..+.+.++..+..+ +..|..+-+.+|+||+.. |..+.++
T Consensus 348 ~~~~~~~~~~l~~~-------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s~ 408 (485)
T KOG0569|consen 348 ALLLMSIALFLSNS-------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQSV 408 (485)
T ss_pred HHHHHHHHHHHHHH-------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHHH
Confidence 88777765422200 000011122334444333333 347888999999999998 8888888
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCCcc
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTPGY 264 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 264 (609)
....+.+..++-...-..+.+.+|- +.|++..+..++..+..+...|+.
T Consensus 409 ~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 409 ATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 7777766666655555556565665 455555555555555555544543
No 209
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.78 E-value=2.9e-07 Score=93.50 Aligned_cols=167 Identities=17% Similarity=0.118 Sum_probs=130.9
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
..|.+.+-..+.++.+|.+..|+|.++. +.|+|..++|+.++..++......+..-.+++|.-.+|+......+.+.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 4566777778899999999999999987 589999999999999999999999999999998657888888888888888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
.+.+.+. | .+...++ .+++|+|.|...|....++.+..++.+. -++..++.+
T Consensus 288 ~~G~~~~--P-------------------~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~LSgmaQ 339 (395)
T COG2807 288 LVGLLLA--P-------------------GQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAI-----AAALSGMAQ 339 (395)
T ss_pred HHHHHHh--h-------------------hhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHH-----HHHHHHHhh
Confidence 8877765 2 2333444 4789999999999999999998765442 334445544
Q ss_pred HHHhhhHHHHhhhhhhcccccc-hhHHHHHHHHHHHH
Q 039271 217 FFLNVGSLFSNTILVYYEDSGK-WTLGFLVSLASAVI 252 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~g-~~~~f~~~~~~~~~ 252 (609)
-..-+=+.+||.+.|++.|..| |+..++..+...++
T Consensus 340 g~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~ 376 (395)
T COG2807 340 GVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLL 376 (395)
T ss_pred hhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHH
Confidence 4444556778999999999865 88776665544333
No 210
>PRK11043 putative transporter; Provisional
Probab=98.77 E-value=7.4e-07 Score=95.38 Aligned_cols=150 Identities=11% Similarity=0.037 Sum_probs=107.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 039271 66 GLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSF 145 (609)
Q Consensus 66 ~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 145 (609)
.+....++....+.|.|++ +.|.+..+.++......++..++.++.+++.||+ |+|+.+....+...++.+.+.....
T Consensus 213 ~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (401)
T PRK11043 213 AACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASL 290 (401)
T ss_pred HHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455556677787775 5799999999888888888999999999999995 9999876666555554443332211
Q ss_pred hccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHH
Q 039271 146 LMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLF 225 (609)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 225 (609)
.. ..+.+..++...+.+++.+...|...+...|..| ++ ++++.++++.....++..
T Consensus 291 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~~~~~~ 346 (401)
T PRK11043 291 LS-----------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQLGLCFL 346 (401)
T ss_pred hc-----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHHHHHHH
Confidence 00 0234445556667788888888888887777765 45 889999999888888888
Q ss_pred HhhhhhhcccccchhH
Q 039271 226 SNTILVYYEDSGKWTL 241 (609)
Q Consensus 226 ~~~i~~~l~~~~g~~~ 241 (609)
++.+.+.+.+......
T Consensus 347 ~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 347 ASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHccCCChhHH
Confidence 8888888877544433
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=98.68 E-value=3.8e-07 Score=99.21 Aligned_cols=127 Identities=13% Similarity=0.082 Sum_probs=93.6
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHH
Q 039271 92 ANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIF 171 (609)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (609)
...+.+.....+...++.+++++++||+ |||+.+..+.++..++.+.+.+. + ..+.+.+
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~--~------------------~~~~~~~ 322 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALIFFI--P------------------PSNVWLI 322 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh--C------------------cchHHHH
Confidence 3344555566677788889999999995 99999998876655443333222 1 1456667
Q ss_pred HHHHHHHHHhhcCchhhhhhhhhccCCCCChh-hhhccchhHHHHHHHHhhhHHHHhhhhhhcccccch
Q 039271 172 YLSIYLIAFGYGGHQPTLATFGADQFDESKPK-ERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKW 239 (609)
Q Consensus 172 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~ 239 (609)
++..++.|++.+...+..+++++|..|.++.+ .++..|..++.+.+...+|..+|+.++|++.+..|+
T Consensus 323 ~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 323 FALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77778899999999999999999998744321 111256678889999999999999999988776655
No 212
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.68 E-value=8.4e-07 Score=94.14 Aligned_cols=139 Identities=13% Similarity=0.192 Sum_probs=99.9
Q ss_pred cccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHH
Q 039271 400 SMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQ 479 (609)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 479 (609)
...+.+..+-+.+-++..+++ +|++..+ .+..|+++.++-++.+.+.+ ++|..
T Consensus 410 v~~a~~~~gEI~~~ffs~klI----~kiGHv~-------v~~lgLa~~~~Rf~~~S~L~----------------n~W~v 462 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFKLI----EKIGHVN-------VMYLGLACNVGRFLYYSYLQ----------------NPWMV 462 (618)
T ss_pred ehhhhhccchHHHHHHHHHHH----HHhcccc-------eeeehhhHHHHHHHHHHHhc----------------Cchhe
Confidence 444555555555555555554 4433222 47788889999988888764 66777
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhh
Q 039271 480 IPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMAS-ISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMD 558 (609)
Q Consensus 480 i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 558 (609)
++.-++.++....+.....+|+...+|+++|.+++++.... -++|-.+|+.+.+.+.... +..
T Consensus 463 LPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f----------------g~~ 526 (618)
T KOG3762|consen 463 LPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF----------------GAR 526 (618)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee----------------hhH
Confidence 77889999999999999999999999999999999998855 5677788888887664321 223
Q ss_pred HHHHHHHHHHHHHHHHHhhhccc
Q 039271 559 RFYFLLAVLTAFDFVIYLICANW 581 (609)
Q Consensus 559 ~~f~~~a~~~~v~~v~~~~~~~~ 581 (609)
.+|+++++.+++.++++...-+.
T Consensus 527 ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 527 TTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Confidence 46788888877776666554433
No 213
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.68 E-value=8.1e-07 Score=94.86 Aligned_cols=177 Identities=11% Similarity=0.040 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
+...++..++.....-....+...|+++.-|.+....+...++..+.-...-.+.+++..|+ |-|+++.++.+..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44444444555555555557888898864447778888888888888888889999999995 99999999998888877
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
.+.+....|. ........+...+.|+..+........++.+..|++. |+++-++++.
T Consensus 288 ~l~a~~~~~~-----------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~ 344 (400)
T PF03825_consen 288 LLYAYFSDPW-----------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSA 344 (400)
T ss_pred HHHHHhcCCc-----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHH
Confidence 7776651111 0112223444567899999999999999999999999 8999998776
Q ss_pred -HHhhhHHHHhhhhhhcccccchh------HHHHHHHHHHHHHHHHHH
Q 039271 218 -FLNVGSLFSNTILVYYEDSGKWT------LGFLVSLASAVIALLSYL 258 (609)
Q Consensus 218 -~~~ig~~~~~~i~~~l~~~~g~~------~~f~~~~~~~~~~~~~~~ 258 (609)
...+|..+|..++|++.|.+|-+ ..+.+.++..++..++++
T Consensus 345 ~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 345 LSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999999999987644 344445554444444433
No 214
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.68 E-value=1.7e-07 Score=98.66 Aligned_cols=140 Identities=16% Similarity=0.098 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGL 137 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 137 (609)
.+.+.+..++....++.+..+++.|+++.+|.+..+++++.....+...++.+++|+++||+ |||+.+..+......+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 44455555555556677788999999999999999999999999999999999999999995 99988877776655555
Q ss_pred HHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHH
Q 039271 138 VLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYF 217 (609)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 217 (609)
.++.+...+ ..+.+..+....+.+++.|...+...+++++.+| ++ ++...|+.+.
T Consensus 306 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~g~~~~ 360 (366)
T TIGR00886 306 FLVVLGLVS------------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVSGLVGA 360 (366)
T ss_pred HHHHhcCCC------------------cchHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHHHHHHH
Confidence 444433000 0145555555666666777777778888888887 35 8899999888
Q ss_pred HHhhhH
Q 039271 218 FLNVGS 223 (609)
Q Consensus 218 ~~~ig~ 223 (609)
..++|+
T Consensus 361 ~~~~g~ 366 (366)
T TIGR00886 361 IGNLGG 366 (366)
T ss_pred hccCCC
Confidence 877763
No 215
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.64 E-value=3.3e-07 Score=100.56 Aligned_cols=165 Identities=12% Similarity=0.011 Sum_probs=115.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.++.+++..++.+...+....+.+ |+.+...-+....+++.+...+...++.++.++++||+ |||+++..+.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 5566666666777776666556555 44333333455666777777788899999999999995 999999988877666
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCCh-hhhhccchhHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKP-KERQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~ 214 (609)
+.+.+....... ..+.+.+++..++.+++.+...+..+++++|..|.++- ..++..|..+++
T Consensus 309 ~~~~~~~~~~~~-----------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 309 SCGVLLLMGLAA-----------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHhccC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 655543321100 13455666677778899999999999999999774321 111114567888
Q ss_pred HHHHHhhhHHHHhhhhhhcccccch
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKW 239 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~ 239 (609)
..+...+|..+++.+.|++.+..|+
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999887765554
No 216
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=3e-05 Score=82.91 Aligned_cols=111 Identities=11% Similarity=0.041 Sum_probs=86.0
Q ss_pred hhhHH-HHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHH
Q 039271 93 NAANN-VSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIF 171 (609)
Q Consensus 93 ~~~~~-~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (609)
.+|.. ..+.+....+..++++.+.|+. |.|..+.++...+..-.+.... .|-+.+
T Consensus 50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~-----------------------~N~y~~ 105 (461)
T KOG3098|consen 50 YAGYYGQAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF-----------------------PNSYYL 105 (461)
T ss_pred CccHHHHHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh-----------------------cchHHH
Confidence 34443 6777888899999999999995 9999999998776655443333 456778
Q ss_pred HHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhc
Q 039271 172 YLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 172 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l 233 (609)
+.+-.+.|+|.+..+.....++++..+++. +.+..++.....+.+.++|.++.-.+
T Consensus 106 yfssallG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 106 YFSSALLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred HHHHHHhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhheee
Confidence 889999999999999999999999888877 77777777777777776665554433
No 217
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.59 E-value=4.3e-06 Score=89.28 Aligned_cols=139 Identities=9% Similarity=0.061 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 039271 75 VGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCG 154 (609)
Q Consensus 75 ~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (609)
.....+.|+++.+|.+..+.++.......+..++.++.+++.||+ +|+... +.....++.+.........
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~------- 295 (394)
T PRK11652 226 FEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG------- 295 (394)
T ss_pred HHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc-------
Confidence 345567788888999999999988888888888999999999995 743322 2222222222222211100
Q ss_pred CCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcc
Q 039271 155 DGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYE 234 (609)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~ 234 (609)
..+.+.+.+..++.+++.+...|...+...|.+| ++ ++...++.+...++|+.+++.+++++.
T Consensus 296 ----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 296 ----------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YL------AGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred ----------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc------chHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 1235566777788899999999999999999887 34 778888988889999999999999887
Q ss_pred cccchh
Q 039271 235 DSGKWT 240 (609)
Q Consensus 235 ~~~g~~ 240 (609)
+...+.
T Consensus 359 ~~~~~~ 364 (394)
T PRK11652 359 QTGQFS 364 (394)
T ss_pred CCchHH
Confidence 654443
No 218
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.59 E-value=1.5e-06 Score=93.48 Aligned_cols=163 Identities=10% Similarity=-0.030 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRV-LQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
++..++..++......+..++++.|+.+. .+.+....+...+.+..+..++.+++|+++||+ ++||++.+..++.++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 33344445555555556668889998653 245555556667777788999999999999995 9999988887776666
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
+++.... .+. .......+.|++.+.++|...++..+..+++. +..... ..
T Consensus 313 ~ll~~~~----------------------~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s~~-l~ 362 (410)
T TIGR00885 313 CLGSIFA----------------------GGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGAAG-LV 362 (410)
T ss_pred HHHHHHc----------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhHHH-HH
Confidence 6555543 111 22455666788888889999999999988665 222222 22
Q ss_pred HHHhhhHHHHhhhhhhccccc------chhHHHHHHHHHHHH
Q 039271 217 FFLNVGSLFSNTILVYYEDSG------KWTLGFLVSLASAVI 252 (609)
Q Consensus 217 ~~~~ig~~~~~~i~~~l~~~~------g~~~~f~~~~~~~~~ 252 (609)
++ .+|+.+.|.+.|++.|.. +.+..|+++..+.+.
T Consensus 363 ~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 363 MA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 23 399999999999999943 477888887665443
No 219
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.58 E-value=7.2e-07 Score=94.17 Aligned_cols=175 Identities=10% Similarity=0.040 Sum_probs=136.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh---CCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVL---QQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
|++|.+.+........|+..-..++.|.+..+ +.+....|...++..+.-.+...+..++.+|+ |.|+.++++..+
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHH
Confidence 46666666555555556666566788887544 34456688889999999999999999999995 999999999988
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..+=...+++. ++++.+.+...+.++-.+..-....-++++.+|++. ..+.+
T Consensus 299 ~~iRi~~~~~~----------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y 350 (412)
T PF01306_consen 299 MAIRIIGSGFA----------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLY 350 (412)
T ss_dssp HHHHHHHHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHH
T ss_pred HHHHHHHHhhh----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHH
Confidence 88887777777 678889999999999888888899999999999876 55666
Q ss_pred HH-HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 039271 213 CY-FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 213 ~~-~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 259 (609)
.+ ++.+..+|..+.+.++|++-|..|++..|++.+...++..++..+
T Consensus 351 ~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 351 LVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhee
Confidence 66 456788999999999999999999999998877666555444333
No 220
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.44 E-value=3.7e-06 Score=92.27 Aligned_cols=186 Identities=10% Similarity=-0.019 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhh----hhHHHHHHHHHHHHHHhHHHH----HhhhccchhHH--HH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTRVLQQENAN----AANNVSKWTGTVYMCSLIGAF----LSDSYWGRYLT--CA 127 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~G~----laDr~~Grr~~--~~ 127 (609)
+..+++...+.+..+.-..+.++.|..++.+.+... .+++.+.-.+...+.+++..+ +.||..+.+.. +.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 333444444555555555566777877665443222 667777777777777777554 44441122333 36
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhc
Q 039271 128 VFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQS 207 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (609)
+|.++..++.+.+++..... . .....+.+.+.+..++.++|.....|...+++++..|++.
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~-~------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------ 414 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA-D------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------ 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc-C------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------
Confidence 77777777776665431000 0 0112568888999999999999999999999999999988
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
|++.+++++....+|..+++.+.....+..+|...|...++..++..++++...|
T Consensus 415 ~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 415 MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888777678888887777666655555544433
No 221
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.41 E-value=6.1e-07 Score=91.95 Aligned_cols=177 Identities=10% Similarity=-0.013 Sum_probs=133.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccc--hhHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWG--RYLTCAVFQLIFV 134 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~~~~~~~~~~ 134 (609)
.++...+.....+.+....-+.++.+..+.+..+..+.|...--..+.+.++..+.|.++||+ + |-.....+++...
T Consensus 271 ~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G 349 (464)
T KOG3764|consen 271 YILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVG 349 (464)
T ss_pred hHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHH
Confidence 455666666667777776778889998888886666899888889999999999999999996 8 6445555544444
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 135 VGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
+.+....++ +++..+++-++..+++.+...+........+.+.++..+-.-.|..+++
T Consensus 350 ~~~~~iP~~----------------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaI 407 (464)
T KOG3764|consen 350 VSSGPIPFA----------------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAI 407 (464)
T ss_pred HHhchhHhh----------------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHH
Confidence 433333343 5677788888888888888887777777777776553322237888999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
...+..+|..+||.++|.+.+..|++|.-.+.++..++-.-+
T Consensus 408 ad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapv 449 (464)
T KOG3764|consen 408 ADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPV 449 (464)
T ss_pred HHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998877766665554433
No 222
>PRK11462 putative transporter; Provisional
Probab=98.39 E-value=6e-06 Score=90.23 Aligned_cols=127 Identities=13% Similarity=0.097 Sum_probs=81.3
Q ss_pred hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHH
Q 039271 92 ANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIF 171 (609)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (609)
...+.+...+.+...++.+++++++||+ |+|+++..+..+..+..+++.+. +. .+...+
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~--~~------------------~~~~~~ 321 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFV--PM------------------QASITM 321 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh--ch------------------hHHHHH
Confidence 3445667788888899999999999995 99988776555444433333222 11 223334
Q ss_pred HHHHHHHHHhhcCchhhhhhhhhccCCCCChhh-hhccchhHHHHHHHHhhhHHHHhhhhhhcccccch
Q 039271 172 YLSIYLIAFGYGGHQPTLATFGADQFDESKPKE-RQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKW 239 (609)
Q Consensus 172 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~ 239 (609)
++..++.|++.+...+..+++++|..+.++-+. ++.-+..++...+...+|..+|+.++|++.+..|+
T Consensus 322 ~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 322 FVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 445566777777777777889999877432111 11134445666778888888888888776554443
No 223
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.37 E-value=2.4e-07 Score=96.80 Aligned_cols=148 Identities=16% Similarity=0.132 Sum_probs=116.0
Q ss_pred CcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchh
Q 039271 397 PAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSI 476 (609)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 476 (609)
..+.++..-.++..++.|+.+.+ ++|++|++ .+..|..+-.++.+..++.. ++
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyL----adryNR~~-------v~~vG~~iW~~Av~~~~fs~----------------~F 121 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYL----ADRYNRKR-------VIAVGIFIWTLAVFASGFSN----------------HF 121 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHH----HhhcCcce-------EEeeHHHHHHHHHHHHHHHH----------------HH
Confidence 34566667777777788877664 67776553 58889998888888887742 55
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccch
Q 039271 477 FWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGH 556 (609)
Q Consensus 477 ~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 556 (609)
|.+.+.-.+.|+||....|..++++.+.+|++.|+++.+++++....|..+|.++.+.+...+ .+
T Consensus 122 wq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~---------------~~ 186 (493)
T KOG1330|consen 122 WQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT---------------FW 186 (493)
T ss_pred HHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc---------------cc
Confidence 666666789999999999999999999999999999999999999999988877776554332 12
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcccccccc
Q 039271 557 MDRFYFLLAVLTAFDFVIYLICANWYKGIN 586 (609)
Q Consensus 557 ~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~ 586 (609)
+.+.|+..++++++.+++..++.++..++.
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 445678888999888888888888776543
No 224
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.35 E-value=1.8e-05 Score=86.08 Aligned_cols=205 Identities=11% Similarity=0.013 Sum_probs=139.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hCCchh------h----hhHHHHHHHHHHHHHHhHHHHHhhhc
Q 039271 51 NKGGWKYASILLANQGLATLAFFGVGVNLVLFLTRV-LQQENA------N----AANNVSKWTGTVYMCSLIGAFLSDSY 119 (609)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-~g~~~~------~----~~~~~~~~~~~~~~~~~~~G~laDr~ 119 (609)
.+.-+|.++.+++.+++.+++++.+..+...|..++ ++-++. + ..+....+.+...+..++--++.+|+
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~ 332 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW 332 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345678999999999999999999988888888753 442211 1 22444455555567777778889995
Q ss_pred cch-hHHHHHHHHHHHHHHHHHHHHhh-hc-cCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhcc
Q 039271 120 WGR-YLTCAVFQLIFVVGLVLLSVLSF-LM-IKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQ 196 (609)
Q Consensus 120 ~Gr-r~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 196 (609)
|+ |++...+.++..++.....+... ++ ..+.+-.++ .-..+....+..++...+.|+..+......++++++.
T Consensus 333 -g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~ 408 (477)
T TIGR01301 333 -GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGE---SLPPPTGIKASALIVFAILGIPLAITYSIPFALASIR 408 (477)
T ss_pred -ccchhHHHHHHHHHHHHHHHHHHHHhhhhcccccccccc---ccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHH
Confidence 85 67778888887777776664421 10 000000000 0000011146667777789999999999999999999
Q ss_pred CCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccc--hhHHHHHHHHHHHHHHHHHHhcCCc
Q 039271 197 FDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGK--WTLGFLVSLASAVIALLSYLMGTPG 263 (609)
Q Consensus 197 ~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~ 263 (609)
.+++.+ +.|..+|+.|.++.+...+..+..|.+.+..| -.+++.++++.++++.++.+...|+
T Consensus 409 ~~~~~~----~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 409 SSNLGA----GQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccccCC----CCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 885431 16888999999999999888877777555444 5678888888888887777666554
No 225
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.34 E-value=2.1e-05 Score=69.72 Aligned_cols=134 Identities=17% Similarity=0.144 Sum_probs=91.1
Q ss_pred hhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHH
Q 039271 404 FDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQY 483 (609)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~ 483 (609)
...+..++..++.+++.|+..+| ..+..+..+..++.+..... .+.+.+....
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~-----------~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 58 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK-----------PVLLVGLFIFVLSTAMFALS----------------SNITVLIIAR 58 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh-----------HHHHHHHHHHHHHHHHHHHh----------------ccHHHHHHHH
Confidence 34455556666666654333332 23556666666666655442 2445566667
Q ss_pred HHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHH
Q 039271 484 VLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFL 563 (609)
Q Consensus 484 ~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 563 (609)
++.+++.....+....++.|..|++.|+++.++.++...++..+++.+.+.+.+. .++.+.|++
T Consensus 59 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------------~~~~~~~~~ 122 (141)
T TIGR00880 59 FLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF----------------LGWRAPFLF 122 (141)
T ss_pred HHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc----------------cchHHHHHH
Confidence 8888888888888989999999999999999999999999999999988876431 123345666
Q ss_pred HHHHHHHHHHHHhhhcc
Q 039271 564 LAVLTAFDFVIYLICAN 580 (609)
Q Consensus 564 ~a~~~~v~~v~~~~~~~ 580 (609)
.+++.++..+..+...+
T Consensus 123 ~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 123 LAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHHHHHHHHHhhcCC
Confidence 66666666665555443
No 226
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.34 E-value=1.3e-05 Score=82.90 Aligned_cols=154 Identities=18% Similarity=0.127 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHH
Q 039271 59 SILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLV 138 (609)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 138 (609)
..-.+..++.--.-.....+++.|+.+..|++..+++..++.+..+.+++..++-++..|+ -..|.+.+..++..+.++
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 3334444444444445668999999988999999999999999999999999999999995 889988887765555444
Q ss_pred HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHH
Q 039271 139 LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFF 218 (609)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 218 (609)
..++. .+.. -+-+..+.|+..+.++|+..++..+..|++.+ ..|..-..
T Consensus 318 ~~~l~----------------------~g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~ts--------~~s~~l~m 366 (422)
T COG0738 318 AVALI----------------------GGVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEHTS--------VGSGLLVM 366 (422)
T ss_pred HHHHh----------------------cChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCcccc--------ccceeeee
Confidence 44443 2222 33345667889999999999999999995542 22222334
Q ss_pred HhhhHHHHhhhhhhcccccchhHHHH
Q 039271 219 LNVGSLFSNTILVYYEDSGKWTLGFL 244 (609)
Q Consensus 219 ~~ig~~~~~~i~~~l~~~~g~~~~f~ 244 (609)
..+|+++-|.+-|++.|..|-...+.
T Consensus 367 aivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 367 AIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred heecchHHHHHHHHHHHhhhhHHHHH
Confidence 56889999999999999988777766
No 227
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.32 E-value=0.00089 Score=72.54 Aligned_cols=168 Identities=13% Similarity=0.010 Sum_probs=102.3
Q ss_pred chhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCC-----chhhhhHHHHHHHHHHHHH-HhHHHHHhhhccchhHHHHH
Q 039271 55 WKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQ-----ENANAANNVSKWTGTVYMC-SLIGAFLSDSYWGRYLTCAV 128 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~-----~~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Grr~~~~~ 128 (609)
+|+++.+.+..++-.+.|+.+. -+.+.+.. +.....++-+...+...+. .++-+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR-----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILR-----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 4566666666666666655332 24566655 3345677766665555555 88899999995 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhccC--CC-CCCCCCCccCCCcch------hHHHHHHHHHHHHHhhcCchh-hhhhhhhccCC
Q 039271 129 FQLIFVVGLVLLSVLSFLMIK--PT-GCGDGFISCKPLSSI------FAAIFYLSIYLIAFGYGGHQP-TLATFGADQFD 198 (609)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~------~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~ 198 (609)
....+....++.++...|.-. +| ...|+.......+-. +.|..-+.-+...+-...+.+ ..++++.|.+.
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t 159 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITT 159 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 888888777777766554311 00 110000000000000 011111111122222223344 77999999999
Q ss_pred CCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcc
Q 039271 199 ESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYE 234 (609)
Q Consensus 199 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~ 234 (609)
.++ -.+.+++++.+.|+|..+++.+..++.
T Consensus 160 ~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 160 IDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887 558899999999999999999888876
No 228
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.32 E-value=2.9e-05 Score=83.61 Aligned_cols=173 Identities=20% Similarity=0.058 Sum_probs=113.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
|.++..++...+.+..++.+..+.|.|+++.+|.+..+.++.......+..++..+.+.+.++. ++++.......+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4566666666667777777778889999988999999999988878888888888888876553 455554444444444
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+.+++.....-. ..+.+..+++.++.++|.+...|+.....- .+.+.+ +|+..+++
T Consensus 297 g~~l~~~~~~~~-----------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~-----~G~a~a~~ 352 (413)
T PRK15403 297 GLALLIVGNLLW-----------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP-----KGTVSASL 352 (413)
T ss_pred HHHHHHHHHHHc-----------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC-----CcHHHHHH
Confidence 444443321000 122334566777788888888877765332 332222 67777888
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIAL 254 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 254 (609)
+.....+...++...+++... +-++.|.+..++..+..
T Consensus 353 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 390 (413)
T PRK15403 353 NMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIV 390 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHH
Confidence 888778888888888887654 55666666555444433
No 229
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.31 E-value=1.8e-05 Score=79.34 Aligned_cols=146 Identities=21% Similarity=0.254 Sum_probs=108.2
Q ss_pred HHHHHHHHHhhCCch--hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 039271 77 VNLVLFLTRVLQQEN--ANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCG 154 (609)
Q Consensus 77 ~~~~~yl~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (609)
...+.+.. +.+.+. ...++..+.+.+...++.++.|.++||+ |||+.+..+.....++.++..+. +
T Consensus 23 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~--~-------- 90 (338)
T COG0477 23 PALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALA--P-------- 90 (338)
T ss_pred HHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhC--c--------
Confidence 34444433 444444 4788999999999999999999999996 99988888877655554444443 0
Q ss_pred CCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCC-CChhhhhccchhHHHHHH-HHhhhHHHHhhhhhh
Q 039271 155 DGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDE-SKPKERQSKTLFFCYFYF-FLNVGSLFSNTILVY 232 (609)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~ig~~~~~~i~~~ 232 (609)
. .+.+.+.+.|.+.|++.+...+...+++.|.+|+ +. |+...+.... ...+|..++|.+++.
T Consensus 91 ---------~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T COG0477 91 ---------N-VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLLAGL 154 (338)
T ss_pred ---------c-chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 2477888889989999999999999999999987 33 7788888777 577888888877776
Q ss_pred cccc--cchhHHHHHHHHHH
Q 039271 233 YEDS--GKWTLGFLVSLASA 250 (609)
Q Consensus 233 l~~~--~g~~~~f~~~~~~~ 250 (609)
+... .+|++.|.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 155 LLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHhcchHHHHHHHHHHH
Confidence 6543 57888666555443
No 230
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.30 E-value=4.7e-05 Score=75.33 Aligned_cols=166 Identities=12% Similarity=0.109 Sum_probs=112.1
Q ss_pred HHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 039271 71 AFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKP 150 (609)
Q Consensus 71 ~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (609)
+.|.+..+ ...+++.+|.|..+...+-+...++..++ ++.|.+.|++ |.+.++.+|.+...+|..++........
T Consensus 17 t~Y~Fs~y-S~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~i-- 91 (250)
T PF06813_consen 17 TTYTFSAY-SPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGRI-- 91 (250)
T ss_pred cccchhhh-hHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcc--
Confidence 44555444 45678899999999999999999998874 8899999995 9999999999999999988877632211
Q ss_pred CCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhh
Q 039271 151 TGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTIL 230 (609)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~ 230 (609)
.....|.+.+..++.+.+.............+.||. + ||++.|+.-....+++.+-..+.
T Consensus 92 -------------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 92 -------------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred -------------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHHHH
Confidence 113467777777777776666666666666788984 5 89999987666667666544444
Q ss_pred hhcccccchhHHHHHHHHHHHHHHHHHHhcC
Q 039271 231 VYYEDSGKWTLGFLVSLASAVIALLSYLMGT 261 (609)
Q Consensus 231 ~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 261 (609)
..+...-.-...+.++....+++++...+.+
T Consensus 152 ~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 152 SAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 4333332223333333333444444444433
No 231
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.29 E-value=9.3e-06 Score=86.77 Aligned_cols=158 Identities=18% Similarity=0.172 Sum_probs=117.6
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.+..+++..++...++....+.+.-|.+..+|.+.....+..........++.++..+|++|+ |+|+++.++.++.+++
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVG 315 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 344444455555555555555666666666788888888888888888888899999999995 9999999999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCCh--hhhhccchhHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKP--KERQSKTLFFCY 214 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~ 214 (609)
.+++.+. | ..+.+.+++..++.++|.+...+..+++++|..+-++- +.|+ -|..++.
T Consensus 316 ~~~~~f~--~------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~-eGi~~s~ 374 (467)
T COG2211 316 YLLLYFT--P------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRR-EGIVYSG 374 (467)
T ss_pred HHHHHhh--c------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCc-hhhHHHH
Confidence 9888877 1 15678888888999999999999999999998875332 2222 4556667
Q ss_pred HHHHHhhhHHHHhhhhhhcccc
Q 039271 215 FYFFLNVGSLFSNTILVYYEDS 236 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~ 236 (609)
+.+..=+|..++..+.|++...
T Consensus 375 ~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 375 MTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7777767777777666665443
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.28 E-value=2.5e-05 Score=81.33 Aligned_cols=167 Identities=19% Similarity=0.177 Sum_probs=133.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 039271 66 GLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSF 145 (609)
Q Consensus 66 ~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 145 (609)
+...++++.--..+=+|--+.+|++..+.......+..+..++..+.|++..|-.+++++..++....++++.++.++..
T Consensus 218 ~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~ 297 (403)
T PF03209_consen 218 FLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP 297 (403)
T ss_pred HHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 44455555555677788888999999999999999999999999999999885468888888998888888877776632
Q ss_pred hccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHH
Q 039271 146 LMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLF 225 (609)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 225 (609)
. .+.+.+..+.+++|++.|......-+.+.|+..+++ .|..+|.+.....+...+
T Consensus 298 ~-------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~Gl 352 (403)
T PF03209_consen 298 L-------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARGL 352 (403)
T ss_pred c-------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHHH
Confidence 1 457889999999999999999988999999998887 778899998888888888
Q ss_pred Hhhhhhhcccc----------cchhHHHHHHHHHHHHHHHHH
Q 039271 226 SNTILVYYEDS----------GKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 226 ~~~i~~~l~~~----------~g~~~~f~~~~~~~~~~~~~~ 257 (609)
|..++|.+.|. .+|..+|.+-++..++++++.
T Consensus 353 g~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 353 GTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 87777765441 346677777777666666554
No 233
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.23 E-value=0.00059 Score=72.00 Aligned_cols=157 Identities=16% Similarity=0.079 Sum_probs=110.3
Q ss_pred HHHHHHHHHHh-hCCchhhhh-HHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 039271 76 GVNLVLFLTRV-LQQENANAA-NNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGC 153 (609)
Q Consensus 76 ~~~~~~yl~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (609)
-+++..|+.+. .|++..++. -+.-+.+-.+....++...+.|.. |-|++++++.+..++...++...
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~---------- 91 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFG---------- 91 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH----------
Confidence 47788999886 899998875 667777788888889999999994 99999999988877777776665
Q ss_pred CCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhc
Q 039271 154 GDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l 233 (609)
++...+-+..+.-|++.+. ..+..+++=-..|+++ .-++.+....+.-+|-.++.+++-.+
T Consensus 92 ------------~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQll 152 (412)
T PF01770_consen 92 ------------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQLL 152 (412)
T ss_pred ------------CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566676777777766655 3344555555556554 44556666667667777776666555
Q ss_pred cc--ccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 234 ED--SGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 234 ~~--~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
.. ..++...+++......++++..++.++
T Consensus 153 vs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 153 VSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 44 345667777777766666665554443
No 234
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.22 E-value=3.3e-05 Score=85.32 Aligned_cols=178 Identities=11% Similarity=-0.002 Sum_probs=115.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHH--hhCCch------hhhhHHHHHHHHHHHHHHhHH----HHHhhhccchhHHHHHHHHH
Q 039271 65 QGLATLAFFGVGVNLVLFLTR--VLQQEN------ANAANNVSKWTGTVYMCSLIG----AFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 65 ~~~~~~~~~~~~~~~~~yl~~--~~g~~~------~~~~~~~~~~~~~~~~~~~~~----G~laDr~~Grr~~~~~~~~~ 132 (609)
.+.....||.+....+.++.. ..+.+. ...+++.++-.+...++.++. +++.||+ +..+.+.++.++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 345555666666666666542 111111 124555666666666666666 6666664 677888899988
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..++.+.+.+...... +....+.+.+.+..++.++|.....|...+++.+..|++. |++.+
T Consensus 360 ~~l~f~~l~~~~~~~~-------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~ 420 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN-------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIM 420 (500)
T ss_pred HHHHHHHHHHHHHhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHH
Confidence 8888887766521100 0011345678888999999999999999999999999988 99999
Q ss_pred HHHHHHHhhhHHHHhhhhhhccc----------ccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 213 CYFYFFLNVGSLFSNTILVYYED----------SGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~----------~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
|.+.....+|..++..+.+.... ..++.+.|...++..++..++++...+
T Consensus 421 g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 421 GSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888887777653221 123566776666554433333333333
No 235
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.21 E-value=6.6e-06 Score=87.50 Aligned_cols=172 Identities=9% Similarity=-0.093 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 039271 61 LLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLL 140 (609)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 140 (609)
.++..++.+++.-.+.+++--++ ++++-.+.-.|........+-.+.-++.++|..++ |+-+++.+++..+.+=++.+
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~ 453 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYY 453 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHH
Confidence 44445555555555556664444 46776666677666666777778888899999996 99999999999888887777
Q ss_pred HHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH-HHHHH
Q 039271 141 SVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY-FYFFL 219 (609)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~ 219 (609)
... +|+|+.+..-+++|+..+..+.++.+++++..|++. |.++-++ .....
T Consensus 454 S~L----------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~ 505 (618)
T KOG3762|consen 454 SYL----------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFH 505 (618)
T ss_pred HHh----------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhc
Confidence 777 789999999999999999999999999999999998 7777776 44466
Q ss_pred hhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 220 NVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 220 ~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
.+|-.+|.+|+|.+...+|-+..|.+.++.+++.++......+
T Consensus 506 GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 506 GLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred ccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8899999999999999999999998888777777665554443
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.17 E-value=1.5e-08 Score=110.35 Aligned_cols=185 Identities=16% Similarity=0.101 Sum_probs=110.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVV 135 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 135 (609)
+.+...+...++..+..+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||++++.+.++.++
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccc
Confidence 3444445555555444444444444555556677666 2223344566667778888999995 999999999887777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhc-CchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYG-GHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
+.+.++........ ++ ...+... +....+...+.+ +..+..+.+.+|.||++. |+++.++
T Consensus 329 ~~~~~~~~~~~~~~-----------~~-~~~~~~~-i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~ 389 (451)
T PF00083_consen 329 CSLILGIIFFLGVS-----------SS-SWWSILS-IVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGL 389 (451)
T ss_pred cccccccccccccc-----------cc-ccccccc-ceeeeeccccccccccccccccccccccccc------ccccccc
Confidence 66655411001000 00 0001111 112222222222 445677788999999999 9999999
Q ss_pred HHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHHHhcCC
Q 039271 215 FYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSYLMGTP 262 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 262 (609)
.+....+++.+++.+...+.+..+-...|.+.+++.++..++.+...|
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lp 437 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLP 437 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEe
Confidence 888889999999988888887776334455555544444444443333
No 237
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.13 E-value=1.8e-05 Score=86.17 Aligned_cols=166 Identities=12% Similarity=0.076 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY---WGRYLTCAVFQLIF 133 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~~~~~~~ 133 (609)
.+|...+..++.....|++..|+|.|+++..|.+..+++.+...+.++..++.+++|+++||. +.+|........++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 578888899999999999999999999986679999999999999999999999999999992 25666655555544
Q ss_pred HH-HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 134 VV-GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 134 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
.+ +.+.+... .+......+.+....+.+...++...-..+....+.+ |-...
T Consensus 354 ~~~g~~~l~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k-----~~~~~ 406 (495)
T KOG2533|consen 354 AIIGAISLLAA----------------------AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK-----ALTTV 406 (495)
T ss_pred HHHHHHHHHhh----------------------ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHH-----hHHHH
Confidence 33 32333222 1122222222223333444445555555565554442 33444
Q ss_pred HHHHHHHhhhHHH-HhhhhhhcccccchhHHHHHHHHH
Q 039271 213 CYFYFFLNVGSLF-SNTILVYYEDSGKWTLGFLVSLAS 249 (609)
Q Consensus 213 ~~~~~~~~ig~~~-~~~i~~~l~~~~g~~~~f~~~~~~ 249 (609)
+.+..+.+.++.+ +++..+.....++|...|.+..+.
T Consensus 407 ~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 407 SAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAA 444 (495)
T ss_pred hhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHHH
Confidence 4444444444444 344444555557888888554433
No 238
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.10 E-value=5.7e-05 Score=83.13 Aligned_cols=150 Identities=9% Similarity=0.010 Sum_probs=103.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhCCch----hhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH-------HHHHHHHHH
Q 039271 65 QGLATLAFFGVGVNLVLFLTRVLQQEN----ANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYL-------TCAVFQLIF 133 (609)
Q Consensus 65 ~~~~~~~~~~~~~~~~~yl~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-------~~~~~~~~~ 133 (609)
..+.+..+......++.|.++..+.+. -...++.+...+...+..|+.|++.||+ |||+ .+.+|.++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 344444455555677777764332211 1234455555667778888899999995 9887 377777777
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHH
Q 039271 134 VVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFC 213 (609)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 213 (609)
.++.+.++........ .....+.+.+....++.|+|.+...|...+++.+..|++. ++..++
T Consensus 357 ~~~~~~~~~~~~~~~~------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~g 418 (489)
T PRK10207 357 SLGFLTAAAAGMWFAD------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFILG 418 (489)
T ss_pred HHHHHHHHHHHHhhcC------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHHH
Confidence 7666544322100000 0001345666777888999999999999999999999988 899999
Q ss_pred HHHHHHhhhHHHHhhhhhhc
Q 039271 214 YFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l 233 (609)
+++...++|+.+|..++...
T Consensus 419 ~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 419 MWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998887655
No 239
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.06 E-value=3.7e-05 Score=87.20 Aligned_cols=133 Identities=15% Similarity=0.088 Sum_probs=94.0
Q ss_pred ccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhc--c-------
Q 039271 395 RLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKY--I------- 465 (609)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~------- 465 (609)
....+++.+...++..+...+++.+ ++|.+|++ .+.+|+++++++.++++..+-...++ .
T Consensus 67 s~~~G~i~s~~~i~~~~~~i~v~~~----~~r~~r~~-------~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~ 135 (633)
T TIGR00805 67 TSSSGLINGSYEIGNLLLIIFVSYF----GTKLHRPI-------VIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTG 135 (633)
T ss_pred CCcceeeeehhhHHHHHHHHHHHHh----hcccCcce-------EEEecHHHHHHHHHHHhChHHhcCCccccccccccc
Confidence 3445667777777777777777765 44443332 37788888888888776653211000 0
Q ss_pred ------CC-----------------CCCc-c--cchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHH
Q 039271 466 ------SP-----------------GEKA-S--SLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMA 519 (609)
Q Consensus 466 ------~~-----------------~g~~-~--~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 519 (609)
+. .++. . ...+..++.+-++.|+|.+...+...+++.|.+|++.|+.+.|+.+.
T Consensus 136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~ 215 (633)
T TIGR00805 136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILES 215 (633)
T ss_pred cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHH
Confidence 00 0000 0 11345566788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 039271 520 SISFGNYVSSLLVVMVMGI 538 (609)
Q Consensus 520 ~~~lg~~ig~~~~~~i~~~ 538 (609)
...+|..+|+.+.+.+.+.
T Consensus 216 ~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 216 IAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred HHHhhhHHHHHHHHHHHhc
Confidence 9999999999998877653
No 240
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.06 E-value=0.00011 Score=77.05 Aligned_cols=163 Identities=15% Similarity=0.129 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhc---cchhHHHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSY---WGRYLTCAVFQLI 132 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~~~~~~ 132 (609)
+.++.+....+..-+++..=.+++++|+. .+|++.+-.+.+-....+...+.+|+.|..+||- +||||-++....+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 56777777777777887777789999986 6999999999999999999999999999999973 5888877666554
Q ss_pred H-HHHHHHHHHHhhhccCCCCCCCCCCccCC----CcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhc
Q 039271 133 F-VVGLVLLSVLSFLMIKPTGCGDGFISCKP----LSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQS 207 (609)
Q Consensus 133 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (609)
. .++..++..+. ++ |.-.+++ .......+++++..+.=+.....+.+.-++++|+...++++.
T Consensus 111 ~i~~~l~Lig~aa--Di-------g~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~--- 178 (498)
T KOG0637|consen 111 LIAVSLFLIGYAA--DI-------GLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKT--- 178 (498)
T ss_pred HHHHHHhhhhhHh--hh-------hHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhh---
Confidence 3 45555555442 10 0001121 222456677777778888888889999999999987765321
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhhhc
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~~l 233 (609)
| +.+++.+...+|+.+|..+++++
T Consensus 179 ~--Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 179 R--ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred c--cchhHHHHHHhcceeeeeccccc
Confidence 2 78888889999999988777643
No 241
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.00 E-value=4.7e-05 Score=60.91 Aligned_cols=67 Identities=15% Similarity=0.047 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 64 NQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
..++...+...+.++++.|+. +.|++..++|.+.++..+...+++++.|+++||+ +|+|.+.....+
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 334444455556799999988 4999999999999999999999999999999996 988888776543
No 242
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.00 E-value=0.007 Score=63.92 Aligned_cols=62 Identities=19% Similarity=0.162 Sum_probs=51.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039271 475 SIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVM 536 (609)
Q Consensus 475 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~ 536 (609)
+.|.++..++..|+-.+..+......+.+..|++.|..++|+....-.+|..++..+.-++.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45666667788888888888888888899999999999999999999999988877765543
No 243
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.99 E-value=0.00012 Score=71.20 Aligned_cols=154 Identities=12% Similarity=0.101 Sum_probs=97.8
Q ss_pred HHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCc
Q 039271 80 VLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFIS 159 (609)
Q Consensus 80 ~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (609)
.-|+-+++|+...+++..........+++..+.|-|+|+- |||+..+.-.+.+++.++ .
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYiLsCi----T---------------- 118 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYILSCI----T---------------- 118 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHHHHHH----h----------------
Confidence 3466678899999999888888888888899999999995 999987766555444333 1
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhcCchhhhhh-hhhccCCCCChhhhhccchhHHH-HHHHHhhhHHHHhhhhhhccccc
Q 039271 160 CKPLSSIFAAIFYLSIYLIAFGYGGHQPTLAT-FGADQFDESKPKERQSKTLFFCY-FYFFLNVGSLFSNTILVYYEDSG 237 (609)
Q Consensus 160 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig~~~~~~i~~~l~~~~ 237 (609)
-.++++-.++++|++.|+......++.-+ +++|..+++.-. .+=....++- ..+.+.+-++++...+..+.+.+
T Consensus 119 ---KhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe-qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~ 194 (454)
T KOG4332|consen 119 ---KHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE-QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF 194 (454)
T ss_pred ---hcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh-HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 11255677899999999988877765544 455544222100 0001111222 22344455555665666666654
Q ss_pred --chhHHHHHHHHHHHHHHHHHH
Q 039271 238 --KWTLGFLVSLASAVIALLSYL 258 (609)
Q Consensus 238 --g~~~~f~~~~~~~~~~~~~~~ 258 (609)
|.-.+|..+++...++..+.+
T Consensus 195 slGPVAPFdAAacfLaigmAvil 217 (454)
T KOG4332|consen 195 SLGPVAPFDAAACFLAIGMAVIL 217 (454)
T ss_pred ccCCCCchHHHHHHHHHHHHHHH
Confidence 566778777766666655543
No 244
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.99 E-value=2.3e-05 Score=85.83 Aligned_cols=135 Identities=10% Similarity=-0.054 Sum_probs=106.0
Q ss_pred HHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh-hhccCCCCCCCCCCccCC
Q 039271 84 TRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLS-FLMIKPTGCGDGFISCKP 162 (609)
Q Consensus 84 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 162 (609)
.+.+|.++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++.+++.+...... ..+.. .+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~-~g---------- 347 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA-FG---------- 347 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc-cC----------
Confidence 457899999999999999999999999999999995 999999999888877665443211 00000 00
Q ss_pred CcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccc
Q 039271 163 LSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGK 238 (609)
Q Consensus 163 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g 238 (609)
..+.+.++...++.+++.+....+...++.+..|++. +++.++++....|+|..+++.+++++.+..|
T Consensus 348 --i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 348 --ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred --CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0122334455567778888878888999999999998 9999999999999999999999999988776
No 245
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.83 E-value=1.1e-05 Score=84.46 Aligned_cols=180 Identities=12% Similarity=0.030 Sum_probs=123.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhH--------HHHHHHHHHH-HHHhHHHHHhhhccchhHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAAN--------NVSKWTGTVY-MCSLIGAFLSDSYWGRYLTC 126 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~--------~~~~~~~~~~-~~~~~~G~laDr~~Grr~~~ 126 (609)
+.++..+..++..-+++|+...+...-++ .+|..+++... ...+...+.. .+.++..++.|++ |||+..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 56777778888888889987666555444 45554444332 1112222222 2566678889995 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHH-HHHHhhcCchhhhhhhhhccCCCCChhhh
Q 039271 127 AVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIY-LIAFGYGGHQPTLATFGADQFDESKPKER 205 (609)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (609)
+.+.+++.+..+.++... + + ..+-..+++.-. .+-++.-+.....-.+-+|.||++.
T Consensus 382 ~~GF~~~~i~~~~~~~~y--~-------~---------~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv---- 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPY--N-------Q---------LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV---- 439 (538)
T ss_pred HhhHHHHHHHHHHHcCCc--c-------c---------ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH----
Confidence 999988887776665541 1 0 001111222222 2334555556666777899999999
Q ss_pred hccchhHHHHHHHHhhhHHHHhhhhhhccc-----ccchhHHHHHHHHHHHHHHHHHHhcC
Q 039271 206 QSKTLFFCYFYFFLNVGSLFSNTILVYYED-----SGKWTLGFLVSLASAVIALLSYLMGT 261 (609)
Q Consensus 206 ~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~-----~~g~~~~f~~~~~~~~~~~~~~~~~~ 261 (609)
|+...|+.....-.|+++|...-.++.+ ..|.+.+|++.+.+++++.+.-++.+
T Consensus 440 --R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 440 --RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred --hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 9999999999999999999988888988 77899999999999888887665543
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.77 E-value=0.0005 Score=76.29 Aligned_cols=183 Identities=12% Similarity=-0.022 Sum_probs=102.4
Q ss_pred CchhHHHHHHHHHHHHHHHHh-hHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFG-VGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
.+|.....+....+..++-+. +..|.+.. -+..|.+... .+...+..+...++..++.++.||+ |||+.++.+...
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i-f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTI-FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHH-HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 345455455555555554443 33444444 4556766544 5556667777888888889999995 999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHH-HHHHhhcCchhhhhhhhhccCCCCChhhhhccchh
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIY-LIAFGYGGHQPTLATFGADQFDESKPKERQSKTLF 211 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 211 (609)
+.++.++++........... ......+..++..+ .......+..|..+.+.+|.||.+. |+.+
T Consensus 369 m~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~~ 432 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPN----------SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSKG 432 (513)
T ss_pred HHHHHHHHHHHHHHhccCCC----------cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------Hhhh
Confidence 99999888776422100000 00011122222222 2333344456677789999999988 7777
Q ss_pred HHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHH
Q 039271 212 FCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALL 255 (609)
Q Consensus 212 ~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 255 (609)
.++....+.+...+-......+.+..++...|.+.+....+...
T Consensus 433 ~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 433 ASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 77744444443333222222233333233445544444444443
No 247
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.74 E-value=0.085 Score=56.71 Aligned_cols=192 Identities=8% Similarity=-0.065 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
..+.+....++.+.+--..-.-.+.|+.+-+.-+.--++..-..-.+...++.+.-|...||. .|.+++..+.+..-+.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLS 81 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHH
Confidence 345555566666666555555667777765443444444444555677788888899999996 9999888887655333
Q ss_pred HHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHH-HhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 137 LVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIA-FGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
..+.+.......... .....+......+++...+.+ +..=+......++=-|+...-..+....+.+.-+..
T Consensus 82 v~~s~~~~~~l~~~~-------~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~m 154 (432)
T PF06963_consen 82 VAASCALFLLLLSYP-------SSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATM 154 (432)
T ss_pred HHHHHHHHHHHHhCC-------ccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHH
Confidence 322221111000000 000000111122222222221 111111111112222332211100000022222222
Q ss_pred HHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
.=.=.+--++||++.|.+....+.....++.++..++.+.+
T Consensus 155 RRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 155 RRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 22223567889999999998888887777777776666654
No 248
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.69 E-value=0.00063 Score=74.37 Aligned_cols=137 Identities=12% Similarity=0.042 Sum_probs=85.3
Q ss_pred cchhHHHHHHHHHhhhhhhhhc-cccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHH
Q 039271 402 SAFDICSVLICTGIYRKILVPV-AGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQI 480 (609)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i 480 (609)
.........+...+.+++.|+. ++| +.+.+|.++.+++.+.+.... .+.....
T Consensus 51 ~~~~~~~~~l~~ligG~LaDRilGrr-----------r~iliG~il~~lg~lll~~~~---------------~~~~~~~ 104 (493)
T PRK15462 51 FSAYCSLVYVTPILGGFLADKVLGNR-----------MAVMLGALLMAIGHVVLGASE---------------IHPSFLY 104 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcH-----------HHHHHHHHHHHHHHHHHHHhh---------------cchhHHH
Confidence 3333344444555555554443 332 346788888888766554311 1112233
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhcCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhh
Q 039271 481 PQYVLVGASEVFMYVGQLEFFNGQAPDG--IKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMD 558 (609)
Q Consensus 481 ~~~~l~g~g~~~~~~~~~~~~~~~~p~~--~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 558 (609)
....+..+|.+...+...+++.+.+|++ .|+++.++.+...++|+.+++.+.+++.+.. ++.
T Consensus 105 l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~----------------Gw~ 168 (493)
T PRK15462 105 LSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY----------------SWA 168 (493)
T ss_pred HHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh----------------ChH
Confidence 3444555666666677778899999875 7999999999999999999999998775321 234
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc
Q 039271 559 RFYFLLAVLTAFDFVIYLICAN 580 (609)
Q Consensus 559 ~~f~~~a~~~~v~~v~~~~~~~ 580 (609)
..|.+.++.++++.+.+++..+
T Consensus 169 ~~F~iaaigm~l~li~~~~~~~ 190 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIFLCGNR 190 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 4566666666666665554433
No 249
>PTZ00207 hypothetical protein; Provisional
Probab=97.68 E-value=0.0014 Score=73.06 Aligned_cols=116 Identities=8% Similarity=0.069 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHH
Q 039271 438 QRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLC 517 (609)
Q Consensus 438 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 517 (609)
..+.+|.++..++.++.+..... ....+.+.+++..++.|+|.....+.....+.+.+| +.||.+.|+.
T Consensus 92 ~vllig~ll~~iG~ll~ala~~~----------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~ 160 (591)
T PTZ00207 92 PIFVLSMTVFCLGTLLFALTFQE----------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIM 160 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc----------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHH
Confidence 46888999999998887774210 011356667777788999998888888888888887 5699999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccc
Q 039271 518 MASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANW 581 (609)
Q Consensus 518 ~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~ 581 (609)
.+...+|+.+.+.+...+.. .++..+|++.+++.++..++.+.+.+.
T Consensus 161 ~~~~gLGsaI~~~l~~~l~~-----------------~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 161 KTFTGLGSAILGSIQLAFFS-----------------DNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----------------HhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 99999999764443332221 012346777777777766666555443
No 250
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.62 E-value=0.0024 Score=68.71 Aligned_cols=163 Identities=12% Similarity=0.047 Sum_probs=102.5
Q ss_pred ccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHH
Q 039271 399 ASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFW 478 (609)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 478 (609)
+++.+...++..+..+..+.+. .|... .++-+..|.+++.++-+++...+.. ++. ..++
T Consensus 74 G~viaa~slg~~i~~liF~~Ws----~k~~~------~k~Pli~s~ii~~~g~llY~~l~~~----------~~~-~~y~ 132 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWS----NKTGS------VKKPLIVSFLIAIIGNLLYLALAYV----------PNG-VKYL 132 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccc----cccCC------cccCHHHHHHHHHHHHHHHHHHHhc----------ccc-hHHH
Confidence 4455556777777777776652 22211 1112788899999998888665533 112 5678
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhh
Q 039271 479 QIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMD 558 (609)
Q Consensus 479 ~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 558 (609)
++++.++.|+|.+-.... =.|+.+....+.|.++++.......+|..+||.+...+..+...+ ..+.++ .....++
T Consensus 133 mL~~R~l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G--~~i~~~-~~~n~YT 208 (488)
T KOG2325|consen 133 MLVARILTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKG--FMILPG-LIFNMYT 208 (488)
T ss_pred HHHHHHHcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCc--eEEcCc-ceEEecc
Confidence 888999999986555433 367777666677888888887777788888877766554332221 122221 2222333
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccccc
Q 039271 559 RFYFLLAVLTAFDFVIYLICANWYKGIN 586 (609)
Q Consensus 559 ~~f~~~a~~~~v~~v~~~~~~~~~~~~~ 586 (609)
..-|+.+++.++..++..++.+|..+..
T Consensus 209 ap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 209 APAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred hHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 4457778888888888888877765443
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.50 E-value=0.0015 Score=67.18 Aligned_cols=150 Identities=15% Similarity=0.085 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHH-HHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccch-hHHHHHHHHHHHH
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFL-TRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGR-YLTCAVFQLIFVV 135 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~~~~~~~~~~~ 135 (609)
.+..+....+...-.|...-+...++ .+.+|.++.+.|-+.+...+...+.+..-+...||+.|. +-.+..++.....
T Consensus 262 ~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP 341 (451)
T KOG2615|consen 262 VLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVP 341 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHH
Confidence 34444443333333333333334444 456899999999888888888888888888888886333 3344444444444
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
..+++... .....+.++..+-.+..+...+....++....|+++ ||...|..
T Consensus 342 ~~llls~~----------------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~ 393 (451)
T KOG2615|consen 342 AFLLLSLA----------------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIF 393 (451)
T ss_pred HHHHHhcc----------------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHH
Confidence 44444444 334567778888888888889999999999999988 99999999
Q ss_pred HHHHhhhHHHHhhhhhhccc
Q 039271 216 YFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~ 235 (609)
.....++-++||.++|.+..
T Consensus 394 ~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 394 RSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHhhhhhhheeEE
Confidence 99999999999999987765
No 252
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.48 E-value=0.055 Score=55.93 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039271 478 WQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMG 537 (609)
Q Consensus 478 ~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~ 537 (609)
..+..+.+.....-..+.+..++..+.+++...|+.|.+.|+..++|+.--..+..++.+
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 344455666665556667777899999999999999999999999987554455554544
No 253
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.44 E-value=0.0035 Score=67.33 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHH
Q 039271 438 QRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLC 517 (609)
Q Consensus 438 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 517 (609)
+.+.++++..++..++.++.. +...+...-++.|++++..+ +...++++.+|++.|+++.|++
T Consensus 93 ~vL~l~~l~Wsl~t~L~~fa~----------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~ 155 (511)
T TIGR00806 93 PVLVLQALSFVCVWLLLLLGT----------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYS 155 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHH
Confidence 357777777777777777743 56677888899999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 039271 518 MASISFGNYVSSLLVVMV 535 (609)
Q Consensus 518 ~~~~~lg~~ig~~~~~~i 535 (609)
+....+|.++++.+.+++
T Consensus 156 ~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 156 RAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999873
No 254
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.11 E-value=0.0063 Score=67.70 Aligned_cols=151 Identities=11% Similarity=-0.032 Sum_probs=107.5
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchh---hhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHH-HHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENA---NAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTC-AVF 129 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~-~~~ 129 (609)
.+|.+...++..+.....||.+..+.|......++-+.. +.++......++..++.++.|.+.-++ +|-|-. +++
T Consensus 308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~~ 386 (599)
T PF06609_consen 308 DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIFG 386 (599)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHHH
Confidence 346677777788888888888888888887777766553 567888888888889999999999885 776644 466
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccc
Q 039271 130 QLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKT 209 (609)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 209 (609)
.+++.+++.+++.. .| .|....+...++.|++.|...........-..|++. .+
T Consensus 387 ~~~~ta~~Gama~~-~~-------------------~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~------ig 440 (599)
T PF06609_consen 387 SVLMTAFCGAMAAV-RP-------------------DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED------IG 440 (599)
T ss_pred HHHHHHHHHHHHHc-cC-------------------CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH------HH
Confidence 55555555544443 11 233344566777888888877666666666667666 88
Q ss_pred hhHHHHHHHHhhhHHHHhhhhh
Q 039271 210 LFFCYFYFFLNVGSLFSNTILV 231 (609)
Q Consensus 210 ~~~~~~~~~~~ig~~~~~~i~~ 231 (609)
...++....-.+|+.+|..+-.
T Consensus 441 ~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 441 TATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHHH
Confidence 8888888888888888766544
No 255
>PRK03612 spermidine synthase; Provisional
Probab=97.03 E-value=0.037 Score=61.23 Aligned_cols=175 Identities=13% Similarity=0.070 Sum_probs=96.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVG 136 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 136 (609)
.++.+++...+..+.+= ......+...+|-+....+.+++++..+..++..++|+++++- -|+- ...-..+-.++
T Consensus 18 ~l~~~~f~sg~~~L~yE---v~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~-~~~e~~i~l~~ 92 (521)
T PRK03612 18 LLLAAVFVCAACGLVYE---LLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGF-VAVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHH-HHHHHHHHHHH
Confidence 33444444444444433 4444555666788889999999999999999999999887552 2222 21111111111
Q ss_pred HH--HHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 137 LV--LLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 137 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
.+ .+.....+.. ......++...++.++..|+..|....+..+... ++ -+...|.
T Consensus 93 ~~~~~ll~~~~~~~----------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ 149 (521)
T PRK03612 93 GLSALILYAAFAFQ----------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVAT 149 (521)
T ss_pred HHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhh
Confidence 11 1111100100 0111222333445677788888777666654322 11 3355778
Q ss_pred HHHHHhhhHHHHhhhhhhccc-ccchh-HHHHHHHHHHHHHHHHHHh
Q 039271 215 FYFFLNVGSLFSNTILVYYED-SGKWT-LGFLVSLASAVIALLSYLM 259 (609)
Q Consensus 215 ~~~~~~ig~~~~~~i~~~l~~-~~g~~-~~f~~~~~~~~~~~~~~~~ 259 (609)
.|....+|+++|.++.+++.- ..|-. ..++++.+..++++++++.
T Consensus 150 ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~ 196 (521)
T PRK03612 150 VLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWL 196 (521)
T ss_pred hHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999886554 56744 4444444444444444433
No 256
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.99 E-value=0.0042 Score=65.49 Aligned_cols=185 Identities=16% Similarity=0.057 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH-HHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYL-TCAVFQLIFVV 135 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~~~~~~~~~~~ 135 (609)
.+.+++++.......||+..+.+-.-+ ..-|.+...+|++.....++++++..++|.+.||. ...| +++.......+
T Consensus 267 ~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v 344 (480)
T KOG2563|consen 267 QFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALV 344 (480)
T ss_pred cHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHH
Confidence 455555555556566665555543222 23466668899999999999999999999999995 5433 44444444444
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 136 GLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
+...+...+. .....++++..-.+.|++..+..|...-+..|..-+..+ +...|+.
T Consensus 345 ~~~~l~~~t~------------------~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E------~tSsGll 400 (480)
T KOG2563|consen 345 GTLMLLTCTL------------------FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE------GTSSGLL 400 (480)
T ss_pred HHHHHHHhhc------------------cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC------cccceeE
Confidence 4322222211 112345566666777888888888888888887544442 2334555
Q ss_pred HHHHhhhHHHHhhhhhhcccccc----hhHHHHHHHHHHHHHHHHHHhcCCcceec
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGK----WTLGFLVSLASAVIALLSYLMGTPGYRYV 267 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 267 (609)
+...++-+++=..+-+.+.+..+ +...-+......+++.++..+.++.+++.
T Consensus 401 ~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 401 NLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred EeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 55556655555566666666554 33333444444555555555666655443
No 257
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.97 E-value=0.021 Score=52.34 Aligned_cols=106 Identities=13% Similarity=0.133 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHH
Q 039271 96 NNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSI 175 (609)
Q Consensus 96 ~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (609)
.-.++......+..++...+.+++ |.|+.++++.+.+.+-.+... . .+.+.++.+-
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~-~----------------------~~~~~l~~~s 96 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFF-Y----------------------PNSYTLYPAS 96 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHH-h----------------------hhHHHHHHHH
Confidence 445666777788888889999995 999999999887664333221 1 4567888899
Q ss_pred HHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhh
Q 039271 176 YLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILV 231 (609)
Q Consensus 176 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~ 231 (609)
++.|++.+..+.....++.+..+++. |++..+++....+.+.++|.++.-
T Consensus 97 ~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 97 ALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877666 777778777777777776665543
No 258
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.92 E-value=0.03 Score=60.15 Aligned_cols=149 Identities=14% Similarity=0.013 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 039271 63 ANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSV 142 (609)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 142 (609)
+...+-.++.-+....+..|+..+ |++...+|..-+...+....+.++..++.+|+ |..|.=++++........+...
T Consensus 265 ~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~ 342 (432)
T PF06963_consen 265 FALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVV 342 (432)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHH
Confidence 333333344445567788998865 99999999999999999999999999999996 9999999998877665555554
Q ss_pred HhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhh
Q 039271 143 LSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVG 222 (609)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 222 (609)
+.+.... +....+...++.+.++.=+|.=++--+...++.|..|+++ ||...|..+...++.
T Consensus 343 ~~~~~~~------------~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf 404 (432)
T PF06963_consen 343 SFWAPGS------------PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLF 404 (432)
T ss_pred HHhcCCC------------CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHH
Confidence 4322110 0012456666667776667777777888999999999888 999999999999998
Q ss_pred HHHHhhhhh
Q 039271 223 SLFSNTILV 231 (609)
Q Consensus 223 ~~~~~~i~~ 231 (609)
-++..+++-
T Consensus 405 ~ll~~~~~i 413 (432)
T PF06963_consen 405 ELLSFVLTI 413 (432)
T ss_pred HHHHHHHHh
Confidence 888765543
No 259
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.80 E-value=0.0061 Score=66.17 Aligned_cols=150 Identities=15% Similarity=0.073 Sum_probs=114.8
Q ss_pred chhHHHHHHHHHHHHHHHHh-hHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHH-HHhhhccchhHHHHHHHHH
Q 039271 55 WKYASILLANQGLATLAFFG-VGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGA-FLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G-~laDr~~Grr~~~~~~~~~ 132 (609)
.|..+.+++..++....-.+ ....+..|+...++.+..+.+...+.......++.++.. .+.-. +|-|+++..|++.
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLS 317 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHH
Confidence 34444444443333332221 221335677778999999999999999999999999998 55666 6999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
..+...+.++. ++.|+.+....+.+ ......|..-++++.+.++++ +|+.+
T Consensus 318 ~~~~~~~~af~----------------------~~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~~e------~g~v~ 368 (463)
T KOG2816|consen 318 EFLQLLLFAFA----------------------TETWMMFAAGVVVA-LAGIVFPAIRAFASILVSPEE------QGKVF 368 (463)
T ss_pred HHHHHHHHHHh----------------------ccchhhhHHHHHHH-hhcchhHHHHhHHHhhccccc------ccchh
Confidence 99999999998 66777777776654 356778888999999999998 99999
Q ss_pred HHHHHHHhhhHHHHhhhhhhcc
Q 039271 213 CYFYFFLNVGSLFSNTILVYYE 234 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~ 234 (609)
++....-++.++++|.+-+.+.
T Consensus 369 ~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 369 GIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred hHHHHHHHHhhhhhHHHHHHHH
Confidence 9999999999888888876553
No 260
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.72 E-value=0.29 Score=53.56 Aligned_cols=169 Identities=12% Similarity=0.028 Sum_probs=95.6
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhC---CchhhhhHHHHHHHH-HHHHHHhHHHHHhhhccchhHHHH
Q 039271 52 KGGWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQ---QENANAANNVSKWTG-TVYMCSLIGAFLSDSYWGRYLTCA 127 (609)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g---~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~ 127 (609)
+..+++++.+.+..++-.+.|.... -+.+.+= .++..+..+-....+ +..+...+-.+++|++ +|.+++.
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy 93 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 3446677777777666666544221 1222221 233344444332222 4556677789999996 9999998
Q ss_pred HHHHHHHHHHHHHHHHhhhcc--CCC-CCCCCCCccCCCcchh---------HHHHHHHHHHHHHhhcCchh-hhhhhhh
Q 039271 128 VFQLIFVVGLVLLSVLSFLMI--KPT-GCGDGFISCKPLSSIF---------AAIFYLSIYLIAFGYGGHQP-TLATFGA 194 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~l~g~~~~~~~~-~~~~~~~ 194 (609)
.....+.....+.++...|+- .++ ..++.- ....+.. .|...+.-++.-+-...+.+ ..+++..
T Consensus 94 ~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~---~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN 170 (491)
T PF03219_consen 94 IIIIPFLGFFALFAFVLYPNRDILHPDAFADKL---LAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFAN 170 (491)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHh---hhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877777776666555542 111 111000 0000000 01111111111111112222 4689999
Q ss_pred ccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc
Q 039271 195 DQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 195 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~ 235 (609)
|.++.++ -.+.+++++.+.|+|.++++.+..++.+
T Consensus 171 ~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 171 EITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred hcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887 5588999999999999999988887776
No 261
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.70 E-value=0.039 Score=61.30 Aligned_cols=106 Identities=12% Similarity=0.108 Sum_probs=77.6
Q ss_pred HHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhc
Q 039271 104 TVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYG 183 (609)
Q Consensus 104 ~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 183 (609)
.........+.+-|+. |||.....+..+..++.+..+.. +. ....+..++...+..++.+
T Consensus 362 ~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~~ 421 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWL--PD-----------------DLGGWLHWILPLLGKFFIG 421 (521)
T ss_pred HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHh--hc-----------------cchhHHHHHHHHHHHHHHH
Confidence 5555566668999995 99999999999888888877776 11 0111234444444444455
Q ss_pred CchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc
Q 039271 184 GHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~ 235 (609)
...-....+.+|++|+.. |..+.+.......+|++++|.+......
T Consensus 422 ~~~~~~~~~~~el~pt~~------r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 422 SAFNLIFLYSAELIPTVV------RNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 555566889999999988 9999999999999999999987755544
No 262
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.68 E-value=0.018 Score=64.85 Aligned_cols=173 Identities=14% Similarity=0.143 Sum_probs=115.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHH-HHHHHHHHhHHHHHhhhc-cchhHHHHHHHHHHH
Q 039271 57 YASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKW-TGTVYMCSLIGAFLSDSY-WGRYLTCAVFQLIFV 134 (609)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~G~laDr~-~Grr~~~~~~~~~~~ 134 (609)
.....++...++...+.++.+++|.|+++++|++...+..+.+.. .-+..++.+++|++.-|+ +.-|.+..+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 456777889999999999999999999999999999999888655 556778899999999986 334555555555444
Q ss_pred HHHHHHHHHhh------------------hccCCC-----CCCC--------------------------C---------
Q 039271 135 VGLVLLSVLSF------------------LMIKPT-----GCGD--------------------------G--------- 156 (609)
Q Consensus 135 ~~~~~~~~~~~------------------~~~~~~-----~~~~--------------------------~--------- 156 (609)
+..+......+ |....+ .||. |
T Consensus 473 l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~ 552 (735)
T KOG3626|consen 473 LSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSD 552 (735)
T ss_pred HHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCC
Confidence 44433221110 000010 1554 1
Q ss_pred ----C--CccCC----------------CcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHH
Q 039271 157 ----F--ISCKP----------------LSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCY 214 (609)
Q Consensus 157 ----~--~~~~~----------------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 214 (609)
| =+|.+ .-...+..+++..++..+..+...+....++-..+++++ |..++|+
T Consensus 553 ~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG~ 626 (735)
T KOG3626|consen 553 GNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALGF 626 (735)
T ss_pred CceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhHH
Confidence 1 11222 112334445555555555555555677778888999998 9999999
Q ss_pred HHHHHh-hhHHHHhhhhhhccc
Q 039271 215 FYFFLN-VGSLFSNTILVYYED 235 (609)
Q Consensus 215 ~~~~~~-ig~~~~~~i~~~l~~ 235 (609)
..+... +|.+-+|++-|+++|
T Consensus 627 ~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 627 QWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred HHHHHHHHhcCCchHhhhhhHh
Confidence 777665 567779999999987
No 263
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.67 E-value=0.00034 Score=77.63 Aligned_cols=141 Identities=13% Similarity=0.100 Sum_probs=3.0
Q ss_pred cccccccccccCcccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhc-
Q 039271 386 VMNSHIGEFRLPAASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKY- 464 (609)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 464 (609)
..+.+++--....+.+.+.+-++.++...++..+ +.|. . +.+-+++|.++++++.+++..=+-...++
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~----g~~~-h------rprwig~g~~~~~~g~~l~~lPhf~~~~y~ 96 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYF----GGRG-H------RPRWIGIGALLMGLGSLLFALPHFLSGPYS 96 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH----hhhc-C------CcceeeecHHHHHHHHHHHhccHhhcCCCc
Confidence 3444433335556777777877777777776654 4442 1 22236777777777766654322111100
Q ss_pred -c------------CCCC--------------------CcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhH
Q 039271 465 -I------------SPGE--------------------KASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKS 511 (609)
Q Consensus 465 -~------------~~~g--------------------~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~ 511 (609)
. ++.+ +.......+++++.++.|+|....++...+|+.|.++++.-+
T Consensus 97 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~sp 176 (539)
T PF03137_consen 97 YEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSP 176 (539)
T ss_dssp -------------------------------------------------------SSS----------------------
T ss_pred cccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCc
Confidence 0 0001 011223466788899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039271 512 FGSSLCMASISFGNYVSSLLVVMVMG 537 (609)
Q Consensus 512 ~~~g~~~~~~~lg~~ig~~~~~~i~~ 537 (609)
.+.|+.++...+|-++|..+.+...+
T Consensus 177 lYiGi~~~~~~lGPa~Gf~lg~~~L~ 202 (539)
T PF03137_consen 177 LYIGILYAMSILGPALGFLLGSFCLR 202 (539)
T ss_dssp --------------------------
T ss_pred cchhhhhHHhhccHHHHHHHHHHHHh
Confidence 99999999999998888777776554
No 264
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.64 E-value=0.021 Score=46.23 Aligned_cols=69 Identities=12% Similarity=-0.064 Sum_probs=58.8
Q ss_pred HhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 039271 73 FGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVL 143 (609)
Q Consensus 73 ~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~ 143 (609)
+.+.+.+| .+.++.++|.++.+++-+.-.+++.++.+...++.++. .+++.+..+.+...+..+.+++.
T Consensus 9 FayTplLP-~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 9 FAYTPLLP-LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHhHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555 56778999999999999999999999999999999994 88999999988888888777776
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.31 E-value=2.1 Score=46.22 Aligned_cols=168 Identities=12% Similarity=0.004 Sum_probs=102.5
Q ss_pred CchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhC---CchhhhhHHHHHHHH-HHHHHHhHHHHHhhhccchhHHHHHH
Q 039271 54 GWKYASILLANQGLATLAFFGVGVNLVLFLTRVLQ---QENANAANNVSKWTG-TVYMCSLIGAFLSDSYWGRYLTCAVF 129 (609)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g---~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~ 129 (609)
.+++++.+.+..++-.+.++.+. -+.+.+. .++..+.++-+..-+ +..+..++-+++.+++ -|.+++...
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~ 98 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHH
Confidence 35677777776666666544322 2344443 345555666666655 7788888999999995 999999998
Q ss_pred HHHHHHHHHHHHHHhhhcc--CCCC-CCC-CCCccCC-C--------cchhHHHHHHHHHHHHHhhcCchhhhhhhhhcc
Q 039271 130 QLIFVVGLVLLSVLSFLMI--KPTG-CGD-GFISCKP-L--------SSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQ 196 (609)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~--~~~~-~~~-~~~~~~~-~--------~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 196 (609)
...+....+++++...|.- .++. ... -.++.++ . +.++...+++.-=+.| .=...-..+.+..|.
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWg--slV~S~lFw~faNei 176 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWG--SLVLSLLFWQFANEI 176 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHH--HHHHHHHHHHHHHHh
Confidence 8888888888887766641 1110 000 0000000 0 0011112222211221 111122557888898
Q ss_pred CCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhccc
Q 039271 197 FDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYED 235 (609)
Q Consensus 197 ~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~ 235 (609)
+..++ -.+.+++++...|++..+++.+..++..
T Consensus 177 tt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 177 TTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88877 6688999999999999999999888876
No 266
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.60 E-value=0.12 Score=54.73 Aligned_cols=124 Identities=13% Similarity=0.058 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcc---hhHHHHH
Q 039271 439 RMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDG---IKSFGSS 515 (609)
Q Consensus 439 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~---~r~~~~g 515 (609)
.+.+|.++..+|.+++...... ... +.+.+...++.+++++++|.+..=|....+..++++++ .|.....
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~---~~~----~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~ 75 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIP---PSL----PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFN 75 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTS---SSC----------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhc---chh----hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHH
Confidence 5778888888888885554311 000 11223467788888999999999999999999999876 4555666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccccccc
Q 039271 516 LCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANWYKGI 585 (609)
Q Consensus 516 ~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~ 585 (609)
.++...++|..++..+.+++.+ ..++...|++.++.++++.+.++...+++++.
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred HHHHHHhhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 6777788888888777666542 12345578888888899988888777776665
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.12 E-value=5.4 Score=42.27 Aligned_cols=58 Identities=22% Similarity=0.143 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 039271 475 SIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLV 532 (609)
Q Consensus 475 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~ 532 (609)
+-+|++....++|++.+-...-...++.+..|++.+..+..+.......|-..|..+.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4467777778888888877777777888888888888888887777777776665543
No 268
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.06 E-value=1.7 Score=49.64 Aligned_cols=59 Identities=41% Similarity=0.682 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039271 475 SIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVV 533 (609)
Q Consensus 475 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~ 533 (609)
+.+|+++++++.+.||++..+..+++.++.+|+++|+.+++++....++|+.+...+..
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~ 622 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAE 622 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999999999999999987766544
No 269
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=94.83 E-value=0.54 Score=46.68 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=60.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHH
Q 039271 436 ELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSS 515 (609)
Q Consensus 436 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g 515 (609)
+...+.+|.+...+|+..+......+ ..+.+.|.+....++.+.+......+......+.+|+ .||++.|
T Consensus 65 p~~~l~iG~~~~~~GY~~~~l~~~~~---------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvg 134 (250)
T PF06813_consen 65 PWVVLLIGAVLGFVGYGLLWLAVSGR---------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVG 134 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCc---------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceeh
Confidence 55567888888888887665543220 1123455555555666666666666666666688985 6999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 039271 516 LCMASISFGNYVSSLLVVMV 535 (609)
Q Consensus 516 ~~~~~~~lg~~ig~~~~~~i 535 (609)
+.-...++++.+-+.+...+
T Consensus 135 ilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 135 ILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred hhhHHHHhHHHHHHHHHHHH
Confidence 99999898886665555443
No 270
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.80 E-value=0.17 Score=53.63 Aligned_cols=62 Identities=8% Similarity=-0.012 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhc
Q 039271 166 IFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYY 233 (609)
Q Consensus 166 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l 233 (609)
++.|..++..+..|+..|..+.+....+.|..++++ |...++...++-++|..++..++-++
T Consensus 333 psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 333 PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 457777778888899999999999999999888777 88899999999999999888776544
No 271
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.77 E-value=0.43 Score=51.46 Aligned_cols=162 Identities=15% Similarity=0.079 Sum_probs=101.8
Q ss_pred HHHHHHHHHhhCCc----hhhhhHHHHHHHHHHHHHHhHHHHHhhhccchh-------HHHHHHHHHHHHHHHHHHHHhh
Q 039271 77 VNLVLFLTRVLQQE----NANAANNVSKWTGTVYMCSLIGAFLSDSYWGRY-------LTCAVFQLIFVVGLVLLSVLSF 145 (609)
Q Consensus 77 ~~~~~yl~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr-------~~~~~~~~~~~~~~~~~~~~~~ 145 (609)
+.+..|..+..+.+ .-...+..+.-.+...++.|+..++--+. +++ .-+.++..+...+.+++.....
T Consensus 305 ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~ 383 (498)
T COG3104 305 SSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGI 383 (498)
T ss_pred chHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 45556654432211 12345666777777777777777776663 443 2455555555555555544411
Q ss_pred hccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHH
Q 039271 146 LMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLF 225 (609)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 225 (609)
-. ..+.+..+.+.+....+++++|.=+..|...++++...|+.- .+..++++.+....|..+
T Consensus 384 ~~------------~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s~~ma~wfLt~a~~~~l 445 (498)
T COG3104 384 WF------------GGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KSFIMAMWFLTVAAGQTL 445 (498)
T ss_pred hh------------cCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HHHHHHHHHHHHHHHHHh
Confidence 11 001112567888899999999999999999999999999877 778888888888888888
Q ss_pred Hhhhhhh------cccccchhHHHHHHHHHHHHHHHHH
Q 039271 226 SNTILVY------YEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 226 ~~~i~~~------l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
+..+++. ..+.......|+..+.......+..
T Consensus 446 ~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 446 GGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred hceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 8777763 1222334455666554444433333
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.52 E-value=0.75 Score=49.85 Aligned_cols=116 Identities=18% Similarity=0.159 Sum_probs=75.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcC---CcchhHHH
Q 039271 437 LQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQA---PDGIKSFG 513 (609)
Q Consensus 437 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~---p~~~r~~~ 513 (609)
+.-+.++.++..++.+.++.... ...+........++..+|..+.-...-+...|.. |.+ +|..
T Consensus 59 ~~Y~~i~~~~~~~~~~~~~~~~~------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~l 125 (433)
T PF03092_consen 59 KPYMIIGWLLGAVSALVLALLPA------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDL 125 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHhccc------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHH
Confidence 34567777777666665555421 1223344455567778888888888877777766 444 7788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhccc
Q 039271 514 SSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDLNTGHMDRFYFLLAVLTAFDFVIYLICANW 581 (609)
Q Consensus 514 ~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~ 581 (609)
++.......+|+.++..+.|.+.+.. ++...|.+.+.+.++..+..+++.+|
T Consensus 126 qS~~~~~~~~G~lv~~~l~G~l~~~~----------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 126 QSFVWGVRSVGSLVGSLLSGPLLDSF----------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcC----------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 88888889999999988888665321 11223566666666665555556665
No 273
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.23 E-value=0.29 Score=52.01 Aligned_cols=93 Identities=16% Similarity=-0.022 Sum_probs=63.1
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hC-C---------------chhhhhHHHHHHHHHHHHHHhHH
Q 039271 50 KNKGGWKYASILLANQGLATLAFFGVGVNLVLFLTRV-LQ-Q---------------ENANAANNVSKWTGTVYMCSLIG 112 (609)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-~g-~---------------~~~~~~~~~~~~~~~~~~~~~~~ 112 (609)
..+..+|.++.+++...+.+++++...-+..-++-++ ++ - ....-.|-+.+..+...+.++..
T Consensus 273 ~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~ 352 (498)
T KOG0637|consen 273 ALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLV 352 (498)
T ss_pred hHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence 3455678888899998888888876655555555332 11 1 11112345677788889999999
Q ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 039271 113 AFLSDSYWGRYLTCAVFQLIFVVGLVLLSVL 143 (609)
Q Consensus 113 G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~ 143 (609)
-++.||+ |-|+.+..+...+.++..+..+.
T Consensus 353 ~~l~~~~-g~r~~y~~~~~~f~~~~~~~gl~ 382 (498)
T KOG0637|consen 353 EKLSRKF-GTRKRYWGGVNAFGLATGLAGLV 382 (498)
T ss_pred HHHHHhc-CcceEEeehhHHHHHHHHHHhhh
Confidence 9999996 97777777776566666555544
No 274
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.92 E-value=2.1 Score=46.35 Aligned_cols=118 Identities=18% Similarity=0.142 Sum_probs=73.1
Q ss_pred HHHHHHHHHhHHHHHhhhc--cchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHH
Q 039271 101 WTGTVYMCSLIGAFLSDSY--WGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLI 178 (609)
Q Consensus 101 ~~~~~~~~~~~~G~laDr~--~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 178 (609)
...+..++..+.+.+++|. +||++++..+..+..++.++.-+. .|.-.+ ..+=.+.. ...+++....++.-++.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~-~p~dap--~~~t~~~~-~~~~~~~~~~~ii~~l~ 363 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLS-FPNDAP--LRPTDSPP-LLFTPSYYLALIIGFLL 363 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhcc-ccccCC--CCCCcccc-cccccchhHHHHHHHHH
Confidence 3445555566666776553 589999999988887777766554 332110 00000000 01123355666677788
Q ss_pred HHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhh
Q 039271 179 AFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTI 229 (609)
Q Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i 229 (609)
|++-+..+...+.++++.+| ++ |..+++++-+...+++.++-..
T Consensus 364 G~~D~~~~t~~~~ii~~~~~-~~------~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 364 GFGDACFNTQRYVIIALLYP-DD------RAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred hhHHHHHHHHHHHHHHHHhc-Cc------hHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999995 44 6667777666666666554333
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.42 E-value=19 Score=39.09 Aligned_cols=59 Identities=14% Similarity=0.090 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 039271 475 SIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVV 533 (609)
Q Consensus 475 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~ 533 (609)
+-++.++.++++|+..+........+..+..+++.|..+..+....-.+|-.+|+.+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666889999999888888888888888899999999998888888888877644
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.53 E-value=5.9 Score=36.26 Aligned_cols=83 Identities=10% Similarity=0.105 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHH
Q 039271 436 ELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSS 515 (609)
Q Consensus 436 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g 515 (609)
+++.+.+|.+..++-.+.+.+ .+.+.++++-.+.|++..+.-.+.-.++.+...++.+++-.+
T Consensus 66 ~K~sm~lg~~~y~~y~~~~~~-----------------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ 128 (156)
T PF05978_consen 66 PKWSMILGSLGYAIYIASFFY-----------------PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTG 128 (156)
T ss_pred hHHHHHHHHHHHHHHHHHHHh-----------------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHH
Confidence 345566666666544443332 245677888899999999988888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 039271 516 LCMASISFGNYVSSLLVVMV 535 (609)
Q Consensus 516 ~~~~~~~lg~~ig~~~~~~i 535 (609)
+......++..+|..+...+
T Consensus 129 ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 129 IFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99988888888887766544
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.88 E-value=0.97 Score=48.95 Aligned_cols=57 Identities=19% Similarity=0.245 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhh
Q 039271 167 FAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTI 229 (609)
Q Consensus 167 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i 229 (609)
+-+..++..++.|+..|........+..+..++++ |..+-.+..++.++|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667888999999998888888888887765 6666677777888887777654
No 278
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=89.51 E-value=1.6 Score=44.97 Aligned_cols=101 Identities=11% Similarity=0.059 Sum_probs=60.1
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCC
Q 039271 473 SLSIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWIPDDL 552 (609)
Q Consensus 473 ~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~~~~~ 552 (609)
..++|+....+++......+..+.....+++....+.-|...|++-++.-+=.. .+.-.+.+..+.+ +.-..
T Consensus 323 t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQs---ilT~iVvd~~g~~-----L~ir~ 394 (433)
T KOG3810|consen 323 TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQS---ILTLIVVDDRGLG-----LDIRT 394 (433)
T ss_pred ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHH---hheEEEEcccccC-----CCcce
Confidence 457899999999998888888877777777777777777777776654333322 2222222211110 00000
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhccc
Q 039271 553 NTGHMDRFYFLLAVLTAFDFVIYLICANW 581 (609)
Q Consensus 553 ~~~~~~~~f~~~a~~~~v~~v~~~~~~~~ 581 (609)
+.--+..+|.+++++.++...+.+..+++
T Consensus 395 Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~ 423 (433)
T KOG3810|consen 395 QFVVYSSYFIVLGVIFLIGFGIEYLMCRR 423 (433)
T ss_pred eEEEEeehHHHHHHHHHHHHHHHHHHhhc
Confidence 11223446888888888887765555443
No 279
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=89.47 E-value=20 Score=37.31 Aligned_cols=90 Identities=14% Similarity=-0.010 Sum_probs=53.2
Q ss_pred cccccchhHHHHHHHHHhhhhhhhhccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcccchhH
Q 039271 398 AASMSAFDICSVLICTGIYRKILVPVAGKLNGNPKGLSELQRMGIGLIIGMLAMIAAGATEIQRLKYISPGEKASSLSIF 477 (609)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 477 (609)
...+......+..+++++.+.+.|+++||. ....-.++.+++++.-. ..+..
T Consensus 71 Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-----------~cl~~cily~~scl~k~-----------------~~~~~ 122 (354)
T PF05631_consen 71 IAILFVAGFASSAIFGTFVGSLADRYGRKK-----------ACLLFCILYSLSCLTKH-----------------SSNYP 122 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchH-----------HHHHHHHHHHHHHHHHh-----------------ccccH
Confidence 344566677788888888888766666552 24444455555554321 23556
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHhh-----hcCCcchhHHHHH
Q 039271 478 WQIPQYVLVGASEVFMYVGQLEFFN-----GQAPDGIKSFGSS 515 (609)
Q Consensus 478 ~~i~~~~l~g~g~~~~~~~~~~~~~-----~~~p~~~r~~~~g 515 (609)
.++..=++.|++..+.+...-++.. ..+|++..+...+
T Consensus 123 ~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~ 165 (354)
T PF05631_consen 123 VLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFS 165 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 6677778888887777765545443 2345554444333
No 280
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=88.14 E-value=5.2 Score=43.41 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccc
Q 039271 169 AIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGK 238 (609)
Q Consensus 169 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g 238 (609)
..+++.-++..+....+..+..++-+...+|.. -|+.+++.+...|+|+-....+.-++.|.+.
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~I------GGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAI------GGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc------chHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 333444445566667777888999999999998 8899999999999999887777666666543
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=85.33 E-value=19 Score=38.54 Aligned_cols=123 Identities=12% Similarity=0.047 Sum_probs=75.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhh---CCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 039271 65 QGLATLAFFGVGVNLVLFLTRVL---QQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLS 141 (609)
Q Consensus 65 ~~~~~~~~~~~~~~~~~yl~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 141 (609)
..+..-+++-+..+...--. +. +-+..--|.+-.+.++.++++.+..|++..++ .+-.-+.++.+-...+.+++.
T Consensus 256 Wa~atcgy~qv~nYvQ~LW~-~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~l 333 (412)
T PF01770_consen 256 WAFATCGYYQVINYVQSLWD-TVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFL 333 (412)
T ss_pred HHHHHhHHHHHHHHHHHHHH-hcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHH
Confidence 33444445544444443323 33 22333458888889999999999999997774 776655555544333333332
Q ss_pred HHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 142 VLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
.. ...+.|..+++-++.+..+....+.+..-++.....+. .+..+|+.
T Consensus 334 m~--------------------~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~------yaLVFGiN 381 (412)
T PF01770_consen 334 MS--------------------FTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEER------YALVFGIN 381 (412)
T ss_pred HH--------------------HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------eeeeeeeH
Confidence 22 02678888888888777777777776666666666555 66666653
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=84.02 E-value=71 Score=34.98 Aligned_cols=43 Identities=9% Similarity=-0.171 Sum_probs=37.7
Q ss_pred hhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039271 495 VGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMG 537 (609)
Q Consensus 495 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~ 537 (609)
...++++.|....+.-.+..++....+++|..+++.+...+..
T Consensus 148 ~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 148 LLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3778899999999999999999999999999999888877654
No 283
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=81.87 E-value=12 Score=37.37 Aligned_cols=175 Identities=13% Similarity=-0.016 Sum_probs=98.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhH---HHHHHHHH
Q 039271 56 KYASILLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYL---TCAVFQLI 132 (609)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~---~~~~~~~~ 132 (609)
|..++..+...++...|..+.-|.|..--++ ...--|.+.+.+.+...++.-+..++..|- |.+ .+.+..++
T Consensus 249 ki~LLG~iqsLFE~smytFVFLWTPaLspn~---e~iPhGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~v 323 (454)
T KOG4332|consen 249 KIALLGAIQSLFEGSMYTFVFLWTPALSPND---EEIPHGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLV 323 (454)
T ss_pred HHHHHHHHHHHHhhhhheeeeeecccCCCCc---ccCCchhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHH
Confidence 3344455566667666554444544321111 122347778888888887777777777663 333 23333333
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhH
Q 039271 133 FVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFF 212 (609)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 212 (609)
.++...+..+..... +...++..-+++.+++-.+.|..+|.+.-+-.+..|++. |...+
T Consensus 324 s~a~l~Lpilt~~vs---------------P~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstim 382 (454)
T KOG4332|consen 324 SIAALLLPILTSSVS---------------PSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIM 382 (454)
T ss_pred HHHHHHHHHHHhccC---------------CCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------Hhhhh
Confidence 222222222221111 111233344677778888899999999999999999888 88888
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
.++..-.|+-.-++-...-.-....+-|-.|-++.+....+.+.
T Consensus 383 NfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 383 NFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred hheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 88777777654443211000011235567788877766655443
No 284
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=79.09 E-value=99 Score=34.05 Aligned_cols=65 Identities=6% Similarity=0.036 Sum_probs=47.4
Q ss_pred HHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHH
Q 039271 178 IAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSL 247 (609)
Q Consensus 178 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~ 247 (609)
.++........--..+.+.+|++.+ +...+|-++...++-..+-..+++.+.+..||+..-.+.-
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~-----ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitP 356 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPND-----YSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITP 356 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhH
Confidence 4555556666666777888887653 6677887777777777776678888999999997766543
No 285
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=79.04 E-value=0.68 Score=47.70 Aligned_cols=58 Identities=17% Similarity=0.281 Sum_probs=3.6
Q ss_pred hHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhh
Q 039271 167 FAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTIL 230 (609)
Q Consensus 167 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~ 230 (609)
+-+..++..++.|+..|-.......+..+..++++ |..+-.+..++.++|-.+|..++
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --------------------HHHH----------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777888999999999999999999888766 65666666667777777776543
No 286
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=73.87 E-value=27 Score=35.97 Aligned_cols=71 Identities=8% Similarity=0.022 Sum_probs=44.6
Q ss_pred HHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhc
Q 039271 104 TVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYG 183 (609)
Q Consensus 104 ~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 183 (609)
.-....++.+.+..+ +|.|.++.++...+.. ..+. ++ -..+..+.-+-...|++.+
T Consensus 70 ~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~l-----yiA~--Nl----------------~pr~~tlVPa~~~~G~aa~ 125 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRF-LGTKWTMVLAVFPYAL-----YIAA--NL----------------EPRYETLVPAGLVLGMAAG 125 (390)
T ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH-----HHHh--hc----------------chhHHhhccHHHhhccccc
Confidence 334444555577777 5999999887654433 2221 10 1335566667777889888
Q ss_pred CchhhhhhhhhccCC
Q 039271 184 GHQPTLATFGADQFD 198 (609)
Q Consensus 184 ~~~~~~~~~~~~~~~ 198 (609)
..++..-+++++.-.
T Consensus 126 p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 126 PIWASKGTYLTPMGQ 140 (390)
T ss_pred cccccCcceecHHHH
Confidence 888777777766544
No 287
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=73.79 E-value=1.1e+02 Score=31.63 Aligned_cols=58 Identities=21% Similarity=0.283 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 039271 475 SIFWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLV 532 (609)
Q Consensus 475 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~ 532 (609)
+++..+...+.-|+-.+..+...+--+.+..+++.|-.+++.......+|..++..+.
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 3333333334445544555555556666778889999999999888888877765554
No 288
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=70.10 E-value=61 Score=35.50 Aligned_cols=81 Identities=6% Similarity=0.014 Sum_probs=40.0
Q ss_pred HHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCC---CCCCccchhhHHHHHHHHHHHHHHHHH
Q 039271 499 EFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVMGITAKGDKPGWI---PDDLNTGHMDRFYFLLAVLTAFDFVIY 575 (609)
Q Consensus 499 ~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~f~~~a~~~~v~~v~~ 575 (609)
.++.....++.++-++-.+.....+|.+++..+.-.+..... +..|+ +.+..--.+..|..+.+.+.++..+..
T Consensus 141 GWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f---~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v 217 (544)
T PF13000_consen 141 GWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDF---CNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILV 217 (544)
T ss_pred hhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHH---HHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHH
Confidence 344455666767777666666666666666444333321100 00111 111111233445556677766666666
Q ss_pred hhhcccc
Q 039271 576 LICANWY 582 (609)
Q Consensus 576 ~~~~~~~ 582 (609)
.++.+|.
T Consensus 218 ~~~k~E~ 224 (544)
T PF13000_consen 218 AFFKKEK 224 (544)
T ss_pred heEeecc
Confidence 6666653
No 289
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=69.47 E-value=39 Score=35.74 Aligned_cols=161 Identities=12% Similarity=-0.028 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHH--HHHHHHHHHHH
Q 039271 61 LLANQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCA--VFQLIFVVGLV 138 (609)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~--~~~~~~~~~~~ 138 (609)
+++.....-++|..--...+.-+. +.|++..+.+.+.....-...+.+...|.+... .|++.. -+.-.-.++..
T Consensus 270 la~i~lt~K~gf~a~da~t~LkLl-e~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~---~~pl~~~lka~~~R~~~~~ 345 (510)
T KOG3574|consen 270 LAGILLTGKLGFQAADALTSLKLL-EHGVPKEELALIAVPLVPLQIALPLYIGKWTAG---PRPLNVFLKAVPYRLGGGL 345 (510)
T ss_pred HHHHHHHHHHHhhhhhhccchHHH-HcCCChhHheeeeeehhhHHHhhhhhheeecCC---CCcchHHHHhhhHHHHHHH
Confidence 334444455555554444454454 579999888766644444555555555555432 122111 11111111111
Q ss_pred HHH-HHh-hhccCCCCCCCCCCccCCCcchhHHHHHH-HHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHH
Q 039271 139 LLS-VLS-FLMIKPTGCGDGFISCKPLSSIFAAIFYL-SIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYF 215 (609)
Q Consensus 139 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 215 (609)
... +.- .|.... -|| ... ..+..+++ .-.+.+.....+....+++.+++.|+.. -|+.+++.
T Consensus 346 ~~t~Lv~~~~~~~~---~~G-----~~~-~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~i------ggTymTlL 410 (510)
T KOG3574|consen 346 VQTALVWWTPTLGH---SDG-----TFP-RGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAI------GGTYMTLL 410 (510)
T ss_pred HHHHHHhhhccccc---CCC-----cee-echHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccc------CccHHHHH
Confidence 111 111 122110 000 111 22333333 2333444445556677888999999988 88999999
Q ss_pred HHHHhhhHHHHhhhhhhcccccchh
Q 039271 216 YFFLNVGSLFSNTILVYYEDSGKWT 240 (609)
Q Consensus 216 ~~~~~ig~~~~~~i~~~l~~~~g~~ 240 (609)
+...|+|+-.-..+..++.|..+|.
T Consensus 411 NTLsnLGg~wp~tv~l~l~D~ltv~ 435 (510)
T KOG3574|consen 411 NTLSNLGGNWPGTVALWLADGLTVK 435 (510)
T ss_pred HHHHHhcCCcHHHHHHHhcccCcee
Confidence 9999999999999999998876665
No 290
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=65.96 E-value=68 Score=31.89 Aligned_cols=26 Identities=23% Similarity=0.088 Sum_probs=14.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH
Q 039271 508 GIKSFGSSLCMASISFGNYVSSLLVV 533 (609)
Q Consensus 508 ~~r~~~~g~~~~~~~lg~~ig~~~~~ 533 (609)
-+|..+.|+....++..+.+..+..+
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw~~g 100 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGWASG 100 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 34556666666665555544445544
No 291
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=64.70 E-value=91 Score=30.14 Aligned_cols=61 Identities=11% Similarity=0.111 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHHHhhhcCCc-chhHHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 039271 476 IFWQIPQYVLVGASEVFMYVGQLEFFNGQAPD-GIKSFGSSLCMA-SISFGNYVSSLLVVMVM 536 (609)
Q Consensus 476 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~-~~~lg~~ig~~~~~~i~ 536 (609)
.+.++...+..+++.+...+....++.+..|+ +.|+...+.... ...++..+++.+.+.+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555557888888888899999999998 678888888887 46677777776665554
No 292
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=64.25 E-value=40 Score=30.60 Aligned_cols=91 Identities=13% Similarity=0.205 Sum_probs=50.5
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhh
Q 039271 114 FLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFG 193 (609)
Q Consensus 114 ~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 193 (609)
.++||. .|++.+.+.+-.++|...+.+..+.... ....-+....++...+++|+|.-+ +.+.++
T Consensus 56 ~Vs~RM--~rRm~~~~GiP~~lG~~~f~~~y~l~~~-----------~~~dvP~~~~~~~S~~~Fg~gllG---isYGil 119 (153)
T PF11947_consen 56 VVSNRM--LRRMAVFVGIPTALGVAVFVVFYYLKSR-----------QIVDVPPWAVLLVSLVFFGLGLLG---ISYGIL 119 (153)
T ss_pred HHHHHH--HHHHHHHhchHHHHHHHHHHHHHHHHhc-----------cccccCchHHHHHHHHHHHHHHHh---hhhhhc
Confidence 467884 4555555555555555555444322100 000112233344444444443332 456677
Q ss_pred hccCCCCChhhhhccchhHHHHHHHHhhhHHHH
Q 039271 194 ADQFDESKPKERQSKTLFFCYFYFFLNVGSLFS 226 (609)
Q Consensus 194 ~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 226 (609)
+--.++++ -|+.+|+-.+-.|++-+.-
T Consensus 120 SaSWD~~r------~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 120 SASWDPER------EGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred ccccCCCC------CCCcccHHHHHHhHHHHHH
Confidence 77788888 8899999999888876543
No 293
>PRK03612 spermidine synthase; Provisional
Probab=64.19 E-value=1.2e+02 Score=33.76 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=30.6
Q ss_pred HHHHHHHHhhhhhhHHHhhhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039271 484 VLVGASEVFMYVGQLEFFNGQAPDGIKSFGSSLCMASISFGNYVSSLLVVMVM 536 (609)
Q Consensus 484 ~l~g~g~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~ 536 (609)
++.++-.+..+|....+..+.. .+.-+...|-.+..+.+|+.+|+++.+.+.
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 3444545555555544443222 212345566777788889888888887664
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=61.48 E-value=7.4 Score=41.27 Aligned_cols=129 Identities=14% Similarity=0.066 Sum_probs=69.4
Q ss_pred HHHHHHHHHhhCC---chhhhhHHHHH-HHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 039271 77 VNLVLFLTRVLQQ---ENANAANNVSK-WTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTG 152 (609)
Q Consensus 77 ~~~~~yl~~~~g~---~~~~~~~~~~~-~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (609)
..+|.+..+..+- +..-.-....+ +.+.-.+|.+...++-++ +||+..+... +-.+...+..++..+. . |
T Consensus 264 siFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~-lR~lfiPlF~~cn~~~-~-~- 337 (406)
T KOG1479|consen 264 SIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVL-LRLLFIPLFLLCNYPP-L-P- 337 (406)
T ss_pred EecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHH-HHHHHHHHHHHhccCC-C-C-
Confidence 3556666544322 22333444455 677777776666666665 4555444433 2232222333332110 0 0
Q ss_pred CCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHh
Q 039271 153 CGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSN 227 (609)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~ 227 (609)
..-.+-+.++....++|+..|-.......+..+..++++ +..+-.+..+....|...|.
T Consensus 338 ----------v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 338 ----------VVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred ----------ceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHhh
Confidence 001334566677778899999888888888888888776 33333334444445544443
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.14 E-value=27 Score=29.41 Aligned_cols=32 Identities=13% Similarity=0.002 Sum_probs=21.7
Q ss_pred HHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 103 GTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 103 ~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
+...+.....||+-|||+|.++..++..++..
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 34444455679999999998887666554433
No 296
>COG3619 Predicted membrane protein [Function unknown]
Probab=57.50 E-value=1.9e+02 Score=28.16 Aligned_cols=61 Identities=16% Similarity=0.115 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHH-------hhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhh
Q 039271 58 ASILLANQGLATLAFFGVGVNLVLFLTR-------VLQQENANAANNVSKWTGTVYMCSLIGAFLSDS 118 (609)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr 118 (609)
+.+.+..-+...++|......+..+.+. ++.-+...-........+...++...+..+..|
T Consensus 14 ~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~ 81 (226)
T COG3619 14 LLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRR 81 (226)
T ss_pred HHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445566666664444444443332 122223333444555556666665555555555
No 297
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=54.94 E-value=2e+02 Score=27.45 Aligned_cols=43 Identities=7% Similarity=-0.014 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhhc--cchhHHHHHHHHHHHHHHH
Q 039271 96 NNVSKWTGTVYMCSLIGAFLSDSY--WGRYLTCAVFQLIFVVGLV 138 (609)
Q Consensus 96 ~~~~~~~~~~~~~~~~~G~laDr~--~Grr~~~~~~~~~~~~~~~ 138 (609)
...........++..+++.+.++. ..+|+.....+++..+..+
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~ 94 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLL 94 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 334555666677777777773211 1344455444444443333
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=52.54 E-value=2.5e+02 Score=28.04 Aligned_cols=54 Identities=15% Similarity=0.317 Sum_probs=33.7
Q ss_pred cchhHHHHHHHHhhhHHHHhhhhhhccc-------ccchhHHHHHHHHHHHHHHHHHHhcCCc
Q 039271 208 KTLFFCYFYFFLNVGSLFSNTILVYYED-------SGKWTLGFLVSLASAVIALLSYLMGTPG 263 (609)
Q Consensus 208 r~~~~~~~~~~~~ig~~~~~~i~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 263 (609)
|+.......++.|+|+++.-+. ++.. .-.|++.+.+.+++.++-++++.+.-++
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ip--F~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~ 64 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIP--FLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN 64 (267)
T ss_pred cceeeeeccccchhhHHHHHhh--HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5555555666778888876332 2222 1248888888887777766666555444
No 299
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=42.48 E-value=4.4e+02 Score=27.86 Aligned_cols=96 Identities=13% Similarity=-0.019 Sum_probs=64.5
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHH
Q 039271 94 AANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYL 173 (609)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (609)
-|..=.+.++.++++.+..|.+.-++ .|..-++++..-..-+.+++..+ .+.+.|..++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~--------------------~t~~Iw~~Ya 331 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMA--------------------QTQHIWVCYA 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhh--------------------cccceehhhh
Confidence 35566778889999999999998774 66655544443222222222222 1356788888
Q ss_pred HHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHH
Q 039271 174 SIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFY 216 (609)
Q Consensus 174 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 216 (609)
+-++....+....+.+..-+++....+. -|..+|+..
T Consensus 332 ~yvlfr~~y~l~itiA~~~iA~nL~~e~------~gLvFGiNT 368 (433)
T KOG3810|consen 332 GYVLFRVIYQLTITIATFQIARNLSSEL------FGLVFGINT 368 (433)
T ss_pred hHHHHHhhHhhhhhHHHHHHHHhhhhhh------heeeeehHH
Confidence 8888887788888887777888777666 677777633
No 300
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=42.07 E-value=1.2e+02 Score=22.11 Aligned_cols=35 Identities=9% Similarity=0.136 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHH
Q 039271 100 KWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFV 134 (609)
Q Consensus 100 ~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 134 (609)
.......+.....|+..|++++.++...+..++..
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 34445556667788889998898666655544433
No 301
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=39.31 E-value=4.8e+02 Score=27.47 Aligned_cols=120 Identities=16% Similarity=0.125 Sum_probs=71.1
Q ss_pred CchhHHHHHH-HHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHH
Q 039271 54 GWKYASILLA-NQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLI 132 (609)
Q Consensus 54 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 132 (609)
+|+.++.+++ .+..+++.+-.....+..|+. |=+.-+.+.+++.|.....+++++.=++.|.- -.-+-+..=.++
T Consensus 7 ~~~alL~laVf~~aa~GlvyElal~tLatyLl---G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElll 82 (508)
T COG4262 7 RWRALLLLAVFVCAACGLVYELALGTLATYLL---GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLL 82 (508)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHH
Confidence 4665554443 334445555555566677763 55667778888888888888888887776652 222222222222
Q ss_pred HHHHHH----HH-HHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCchhhhhhhhhc
Q 039271 133 FVVGLV----LL-SVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGHQPTLATFGAD 195 (609)
Q Consensus 133 ~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 195 (609)
-.++-+ +. .++ . ....+-+.+++.-.++|.-.|.-.|..+.++..
T Consensus 83 gligg~Sa~~ly~~FA---~---------------~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 83 GLIGGVSAAALYLLFA---L---------------ESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHhccchHHHHHHHHH---h---------------ccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 122111 11 111 1 011356778888888999999999998888876
No 302
>PRK10263 DNA translocase FtsK; Provisional
Probab=37.10 E-value=1.7e+02 Score=35.94 Aligned_cols=28 Identities=11% Similarity=0.076 Sum_probs=14.3
Q ss_pred hhHHHHhhhhhhcccccchhHHHHHHHH
Q 039271 221 VGSLFSNTILVYYEDSGKWTLGFLVSLA 248 (609)
Q Consensus 221 ig~~~~~~i~~~l~~~~g~~~~f~~~~~ 248 (609)
.||++|..++.++...+|.....++..+
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLl 169 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLC 169 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4666666666555555554433333333
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.38 E-value=2.1e+02 Score=24.32 Aligned_cols=33 Identities=9% Similarity=0.162 Sum_probs=25.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039271 506 PDGIKSFGSSLCMASISFGNYVSSLLVVMVMGI 538 (609)
Q Consensus 506 p~~~r~~~~g~~~~~~~lg~~ig~~~~~~i~~~ 538 (609)
..+.++.++++-...-.+++.+..+.+|++.+-
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356688888888888888887777888777654
No 304
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=31.83 E-value=70 Score=25.33 Aligned_cols=41 Identities=24% Similarity=0.420 Sum_probs=22.9
Q ss_pred HHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 039271 214 YFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIALLSY 257 (609)
Q Consensus 214 ~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 257 (609)
+++....++++++ .+.|++.++ .+..++..++..++++++.
T Consensus 12 l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 12 LMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhhe
Confidence 4455666666666 566777665 4445555555544444443
No 305
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=31.65 E-value=5.5e+02 Score=25.81 Aligned_cols=22 Identities=9% Similarity=0.089 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 039271 438 QRMGIGLIIGMLAMIAAGATEI 459 (609)
Q Consensus 438 ~~~~~g~~~~~~~~~~~~~~~~ 459 (609)
.+-...+++..+++..+.....
T Consensus 137 ~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 137 KKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 4445567777888877776643
No 306
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=29.49 E-value=2e+02 Score=24.17 Aligned_cols=20 Identities=5% Similarity=0.056 Sum_probs=10.8
Q ss_pred HhHHHHHhhhccchhHHHHH
Q 039271 109 SLIGAFLSDSYWGRYLTCAV 128 (609)
Q Consensus 109 ~~~~G~laDr~~Grr~~~~~ 128 (609)
..+.|...|+.+|-.+.+.+
T Consensus 59 G~~lG~WLD~~~~t~~~~tl 78 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFSWTL 78 (100)
T ss_pred HHHHHHHHHhhcCCCcHHHH
Confidence 34456666666666554433
No 307
>PHA03049 IMV membrane protein; Provisional
Probab=29.22 E-value=1.1e+02 Score=23.23 Aligned_cols=20 Identities=10% Similarity=0.381 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 039271 561 YFLLAVLTAFDFVIYLICAN 580 (609)
Q Consensus 561 f~~~a~~~~v~~v~~~~~~~ 580 (609)
..+..++++++++++-+..+
T Consensus 6 ~l~iICVaIi~lIvYgiYnk 25 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNK 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 34445555666666655544
No 308
>PF07399 DUF1504: Protein of unknown function (DUF1504); InterPro: IPR009978 This family consists of several hypothetical bacterial proteins of around 440 residues in length. The function of this family is unknown.
Probab=28.71 E-value=2.5e+02 Score=29.88 Aligned_cols=31 Identities=16% Similarity=0.310 Sum_probs=23.8
Q ss_pred CcccccchhHHHHHHHHHhhhhhhhhccccc
Q 039271 397 PAASMSAFDICSVLICTGIYRKILVPVAGKL 427 (609)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 427 (609)
..+.+..+...+.++.+.+.+|++.|+..+.
T Consensus 312 re~lLVgFFLaGLVvlGglQ~WWlqpll~~m 342 (438)
T PF07399_consen 312 REALLVGFFLAGLVVLGGLQQWWLQPLLSGM 342 (438)
T ss_pred hHHHHHHHHHhhHHHcCchHHHHHHHHHhcC
Confidence 3556666677788888999999988887774
No 309
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.35 E-value=71 Score=26.16 Aligned_cols=27 Identities=15% Similarity=0.238 Sum_probs=18.3
Q ss_pred HHHHHHHhhhHHHHhhhhhhcccccchh
Q 039271 213 CYFYFFLNVGSLFSNTILVYYEDSGKWT 240 (609)
Q Consensus 213 ~~~~~~~~ig~~~~~~i~~~l~~~~g~~ 240 (609)
-++.....+|+++|- +-|+..+.++|.
T Consensus 26 r~~q~ilti~aiVg~-i~Gf~~Qqls~t 52 (101)
T KOG4112|consen 26 RFQQLILTIGAIVGF-IYGFAQQQLSVT 52 (101)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 356667788888874 556666666664
No 310
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=27.91 E-value=1e+02 Score=30.89 Aligned_cols=61 Identities=18% Similarity=0.108 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHH---------hhhccchhHHH
Q 039271 64 NQGLATLAFFGVGVNLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFL---------SDSYWGRYLTC 126 (609)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~l---------aDr~~Grr~~~ 126 (609)
..+.+-++-.-..+++..|+++ .|.++.+...+..+..+.-++..++.|.. -||+ |||+..
T Consensus 25 GHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 25 GHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 3444444444455788888885 67777777788888899999999988754 5784 988754
No 311
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=24.81 E-value=67 Score=28.00 Aligned_cols=25 Identities=8% Similarity=0.073 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHhhhcccccccc
Q 039271 561 YFLLAVLTAFDFVIYLICANWYKGIN 586 (609)
Q Consensus 561 f~~~a~~~~v~~v~~~~~~~~~~~~~ 586 (609)
|.+++++.++.++++|++ +|.+|+.
T Consensus 71 ~gv~aGvIg~Illi~y~i-rR~~Kk~ 95 (122)
T PF01102_consen 71 FGVMAGVIGIILLISYCI-RRLRKKS 95 (122)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHS---
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhccC
Confidence 333344433333444444 3334443
No 312
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=24.70 E-value=82 Score=32.39 Aligned_cols=60 Identities=7% Similarity=-0.016 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhh
Q 039271 166 IFAAIFYLSIYLIAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILV 231 (609)
Q Consensus 166 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~ 231 (609)
++.+..++..+.-|+-.|....+..--+.+..++++ |..+++....+-.+|..++..++-
T Consensus 340 psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~------rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 340 PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDV------REFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchH------HHHhHhhheecchhhHHHHHHHhc
Confidence 556777777777787777766665555566566666 778888777777777777765543
No 313
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.41 E-value=4e+02 Score=30.85 Aligned_cols=52 Identities=23% Similarity=0.250 Sum_probs=32.0
Q ss_pred HHHHhh---hccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcC
Q 039271 112 GAFLSD---SYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGG 184 (609)
Q Consensus 112 ~G~laD---r~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 184 (609)
++-++| ++-||.|-++++.+++.++++...+. ....+.+.++..+.+++.++
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll---------------------~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL---------------------FPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH---------------------hcchHHHHHHHHHHHHHHHH
Confidence 444544 44567788888888877777655554 13456666666666655544
No 314
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=24.31 E-value=4.3e+02 Score=30.61 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=31.8
Q ss_pred HHHHhh---hccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccCCCcchhHHHHHHHHHHHHHhhcCc
Q 039271 112 GAFLSD---SYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGDGFISCKPLSSIFAAIFYLSIYLIAFGYGGH 185 (609)
Q Consensus 112 ~G~laD---r~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 185 (609)
++.++| ++-||.|-+++..+.+.++++...+. ....+.+.++..+.+++.++.
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll---------------------~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELL---------------------FGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH---------------------hcCcHHHHHHHHHHHHHHHHH
Confidence 355554 44567777777777777666655443 134566666666666555443
No 315
>PHA02902 putative IMV membrane protein; Provisional
Probab=22.81 E-value=1.3e+02 Score=22.70 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccc
Q 039271 560 FYFLLAVLTAFDFVIYLICANWYKGIN 586 (609)
Q Consensus 560 ~f~~~a~~~~v~~v~~~~~~~~~~~~~ 586 (609)
.|.+.+++.++...+.+...+++|..+
T Consensus 5 tfvi~~v~v~Ivclliya~YrR~kci~ 31 (70)
T PHA02902 5 TFVILAVIVIIFCLLIYAAYKRYKCIP 31 (70)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 467777777777777777777765443
No 316
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=22.66 E-value=1.1e+03 Score=26.14 Aligned_cols=74 Identities=11% Similarity=-0.001 Sum_probs=50.4
Q ss_pred HHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhh-HHHHhhhhhhcccccchhHHHHHHHHHHHHHHHH
Q 039271 178 IAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVG-SLFSNTILVYYEDSGKWTLGFLVSLASAVIALLS 256 (609)
Q Consensus 178 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig-~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 256 (609)
.|++.......--+-+.+.+|.... +...++-++...++- ..+.-.+++-+...+||-+.-.+.-+.++++.++
T Consensus 294 Y~v~inLvE~~wKs~ik~~~~~~~~-----~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 294 YGVSINLVEGVWKSGIKELYPTTNE-----YTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHhHHHhcCChhH-----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 4555556666667778888887653 667777776666665 4555666778888899988777766666555443
No 317
>COG3256 NorB Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]
Probab=22.42 E-value=1.2e+03 Score=26.50 Aligned_cols=98 Identities=17% Similarity=0.069 Sum_probs=53.0
Q ss_pred HHHHHHHHhhCCchhhhhHHHHHHHHHHHHHHhHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--
Q 039271 78 NLVLFLTRVLQQENANAANNVSKWTGTVYMCSLIGAFLSDSYWGRYLTCAVFQLIFVVGLVLLSVLSFLMIKPTGCGD-- 155 (609)
Q Consensus 78 ~~~~yl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 155 (609)
++|.-+++..|.+....=+.++-...+.++.+-.++..+.|. |--+.+.... +..++.++.......-..++++|.
T Consensus 292 ~LPfni~R~~H~nlavvWIa~~wlaa~lyllP~~~~pk~~~l-~s~~L~~al~-~v~~gs~~g~~~gyl~~l~~~~~F~~ 369 (717)
T COG3256 292 VLPFNITRTVHTNLAVVWIATGWLAAGLYLLPELGGPKFQEL-GSPKLLIALF-FVVVGSLAGAWLGYLQLLPAPFWFWF 369 (717)
T ss_pred hccHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhhcCchhhhh-ccHHHHHHHH-HHHHHHHHHHHHHHHhccCCccceee
Confidence 455556677777766665556666777788888888888774 6555554433 334444444443322222222222
Q ss_pred CCCccCCCcchhHHHHHHHHHH
Q 039271 156 GFISCKPLSSIFAAIFYLSIYL 177 (609)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~l 177 (609)
|..--.......+|++++...+
T Consensus 370 G~QG~~~~~~g~lwqlll~~~l 391 (717)
T COG3256 370 GHQGYEYLGRGRLWQLLLIKGL 391 (717)
T ss_pred cccCCccccchHHHHHHHHHHH
Confidence 3222223444557776665554
No 318
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=20.50 E-value=4.1e+02 Score=21.53 Aligned_cols=67 Identities=13% Similarity=0.000 Sum_probs=39.8
Q ss_pred HHHhhcCchhhhhhhhhccCCCCChhhhhccchhHHHHHHHHhhhHHHHhhhhhhcccccchhHHHHHHHHHHHHH
Q 039271 178 IAFGYGGHQPTLATFGADQFDESKPKERQSKTLFFCYFYFFLNVGSLFSNTILVYYEDSGKWTLGFLVSLASAVIA 253 (609)
Q Consensus 178 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~i~~~l~~~~g~~~~f~~~~~~~~~~ 253 (609)
+|+|--.+.|..+.+..|.--.. ..-++....+.+|-.+|......+......+..+....+...+.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~---------~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSL---------SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLS 70 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 34555566677777777743221 22556666777888888877777766555555555444443333
Done!