BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039274
(96 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DWM|A Chain A, Solution Structure Of Linum Usitatissinum Trypsin
Inhibitor (Luti)
Length = 70
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 30 RTSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIV 89
R K++WPELVG G +AA + REN V AI++KEG +T D+RCDRVWV V+ HG+V
Sbjct: 4 RCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVV 63
Query: 90 KYTPRI 95
P I
Sbjct: 64 TSVPHI 69
>pdb|1MIT|A Chain A, Recombinant Cucurbita Maxima Trypsin Inhibitor V
(Rcmti-V) (Nmr, Minimized Average Structure)
Length = 69
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
KSSWP LVGV G VA II R+N V A+I++EG VT D+RC+RV +WV+ G+V P
Sbjct: 7 KSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPP 66
Query: 94 RIG 96
RIG
Sbjct: 67 RIG 69
>pdb|1TIN|A Chain A, Three-Dimensional Structure In Solution Of Cucurbita
Maxima Trypsin Inhibitor-V Determined By Nmr
Spectroscopy
Length = 69
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
KSSWP LVGV G VA II R+N V A+I++EG VT D+RC+RV +WV+ G+V P
Sbjct: 7 KSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPP 66
Query: 94 RIG 96
RIG
Sbjct: 67 RIG 69
>pdb|1VBW|A Chain A, Crystal Structure Of Bitter Gourd Trypsin Inhibitor
Length = 68
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 42/67 (62%)
Query: 30 RTSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIV 89
R KSSWP+LVG G A +I REN +V A+I+K G T D+RCDRV VWV GIV
Sbjct: 2 RCQGKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIV 61
Query: 90 KYTPRIG 96
P IG
Sbjct: 62 ARPPTIG 68
>pdb|3RDY|A Chain A, Crystal Structure Of Buckwheat Trypsin Inhibitor Rbti At
1.84 Angstrom Resolution
pdb|3RDZ|C Chain C, Crystal Structure Of Rbti-Trypsin Complex At 2.26
Angstrom Resolution
pdb|3RDZ|D Chain D, Crystal Structure Of Rbti-Trypsin Complex At 2.26
Angstrom Resolution
Length = 79
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 30 RTSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIV 89
+ S K WPELVG +G AA+II EN V AI++ EG V D RCDRVWV+VD G+V
Sbjct: 13 QCSGKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVV 72
Query: 90 KYTP 93
TP
Sbjct: 73 VDTP 76
>pdb|2CI2|I Chain I, Crystal And Molecular Structure Of The Serine Proteinase
Inhibitor Ci-2 From Barley Seeds
pdb|2SNI|I Chain I, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 83
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 30 RTSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIV 89
R + K+ WPELVG E A ++I+++ + I++ G VTM+YR DRV ++VD +
Sbjct: 17 RHNLKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNI 76
Query: 90 KYTPRIG 96
PR+G
Sbjct: 77 AEVPRVG 83
>pdb|1Y3D|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R67a Mutant
Length = 64
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM+YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVALFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1COA|I Chain I, The Effect Of Cavity Creating Mutations In The
Hydrophobic Core Of Chymotrypsin Inhibitor 2
Length = 64
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ + I++ G VTM+YR DRV ++VD V P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNVAEVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|3CI2|A Chain A, Refinement Of The Three-Dimensional Solution Structure
Of Barley Serine Proteinase Inhibitor 2 And Comparison
With The Structures In Crystals
Length = 66
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ + I++ G VTM+YR DRV ++VD + P
Sbjct: 4 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 63
Query: 94 RIG 96
R+G
Sbjct: 64 RVG 66
>pdb|1TM1|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2
Length = 64
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM+YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1LW6|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution
Length = 64
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM+YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1Y3B|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60s Mutant
Length = 64
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMSYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1YPC|I Chain I, Direct Observation Of Better Hydration At The N-Terminus
Of An Alpha-Helix With Glycine Rather Than Alanine As
N-Cap
Length = 64
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG A ++I+++ + I++ G VTM+YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1YPA|I Chain I, Direct Observation Of Better Hydration At The N-Terminus
Of An Alpha-Helix With Glycine Rather Than Alanine As
N-Cap
Length = 64
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG A ++I+++ + I++ G VTM+YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKAVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1Y34|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60a Mutant
Length = 64
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMAYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1Y3F|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 F69a Mutant
Length = 64
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM+YR DRV + VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLAVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1YPB|I Chain I, Direct Observation Of Better Hydration At The N-Terminus
Of An Alpha-Helix With Glycine Rather Than Alanine As
N-Cap
Length = 64
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG A ++I+++ + I++ G VTM+YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKGVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1Y1K|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58a Mutant
Length = 64
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G V M+YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVAMEYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1Y33|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58p Mutant
Length = 64
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G V M+YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVPMEYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1TMG|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59f Mutant
Length = 64
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VT +YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTFEYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1TM5|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59a Mutant
Length = 64
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VT +YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTAEYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1Y48|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R65a Mutant
Length = 64
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM+YR D V ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDAVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1Y3C|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R62a Mutant
Length = 64
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM+Y DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYAIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1TM3|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k Mutant
pdb|1TO2|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k, In Ph 9 Cryosoak
Length = 64
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VT +YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1TM7|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59y Mutant
Length = 64
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VT +YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTYEYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1TO1|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 Y61a Mutant
Length = 64
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VTM+ R DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEARIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1Y4A|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59r/e60s Mutant
pdb|1Y4D|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59rE60S MUTANT
Length = 64
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VT YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTRSYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1TM4|I Chain I, Crystal Structure Of The Complex Of Subtilsin Bpn'with
Chymotrypsin Inhibitor 2 M59g Mutant
Length = 64
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDHHGIVKYTP 93
K+ WPELVG E A ++I+++ I++ G VT +YR DRV ++VD + P
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTGEYRIDRVRLFVDRLDNIAQVP 61
Query: 94 RIG 96
R+G
Sbjct: 62 RVG 64
>pdb|1HYM|A Chain A, Hydrolyzed Trypsin Inhibitor (Cmti-V, Minimized Average
Nmr Structure)
Length = 45
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVT 71
KSSWP LVGV G VA II R+N V A+I++EG VT
Sbjct: 7 KSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVT 44
>pdb|1CIS|A Chain A, Context Dependence Of Protein Secondary Structure
Formation. The Three-Dimensional Structure And
Stability Of A Hybrid Between Chymotrypsin Inhibitor 2
And Helix E From Subtilisin Carlsberg
Length = 66
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGF--EVTMDYRCDRVWVWVDHHGIVKY 91
K+ WPELVG E A ++I+++ + I++++ +YR DRV + VD +
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLEKQAVDNAYAEYRIDRVRLAVDKLDNIAQ 61
Query: 92 TPRIG 96
PR+G
Sbjct: 62 VPRVG 66
>pdb|1HYM|B Chain B, Hydrolyzed Trypsin Inhibitor (Cmti-V, Minimized Average
Nmr Structure)
Length = 24
Score = 33.5 bits (75), Expect = 0.034, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 73 DYRCDRVWVWVDHHGIVKYTPRIG 96
D+RC+RV +WV+ G+V PRIG
Sbjct: 1 DFRCNRVRIWVNKRGLVVSPPRIG 24
>pdb|1CSE|I Chain I, The High-Resolution X-Ray Crystal Structure Of The
Complex Formed Between Subtilisin Carlsberg And Eglin
C, An Elastase Inhibitor From The Leech Hirudo
Medicinalis. Structural Analysis, Subtilisin Structure
And Interface Geometry
pdb|2SEC|I Chain I, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 70
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 32 SSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVK 90
S S+PE+VG + A E + + EG VT+D R +RV V+ + +V
Sbjct: 5 SELKSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVN 64
Query: 91 YTPRIG 96
+ P +G
Sbjct: 65 HVPHVG 70
>pdb|1TEC|I Chain I, Crystallographic Refinement By Incorporation Of
Molecular Dynamics. The Thermostable Serine Protease
Thermitase Complexed With Eglin-C
pdb|2TEC|I Chain I, Molecular Dynamics Refinement Of A Thermitase-Eglin-C
Complex At 1.98 Angstroms Resolution And Comparison Of
Two Crystal Forms That Differ In Calcium Content
pdb|3TEC|I Chain I, Calcium Binding To Thermitase. Crystallographic Studies
Of Thermitase At 0, 5 And 100 Mm Calcium
pdb|1ACB|I Chain I, Crystal And Molecular Structure Of The Bovine
Alpha-Chymotrypsin-Eglin C Complex At 2.0 Angstroms
Resolution
pdb|1EGL|A Chain A, The Solution Structure Of Eglin C Based On Measurements
Of Many Noes And Coupling Constants And Its Comparison
With X- Ray Structures
Length = 70
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 32 SSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVK 90
S S+PE+VG + A E + + EG VT+D R +RV V+ + +V
Sbjct: 5 SELKSFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVN 64
Query: 91 YTPRIG 96
+ P +G
Sbjct: 65 HVPHVG 70
>pdb|1SIB|I Chain I, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
Length = 70
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 32 SSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVK 90
S S+PE+VG + A E + + EG VT+D R +RV V+ + +V
Sbjct: 5 SELKSFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVKVFYNPGTNVVN 64
Query: 91 YTPRIG 96
+ P +G
Sbjct: 65 HVPHVG 70
>pdb|1MEE|I Chain I, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 64
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 36 SWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVKYTPR 94
S+PE+VG + A E + + EG VT+D R +RV V+ + +V + P
Sbjct: 3 SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 62
Query: 95 IG 96
+G
Sbjct: 63 VG 64
>pdb|4H4F|B Chain B, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound
To Inhibitor Eglin C From Hirudo Medicinalis
Length = 70
Score = 32.3 bits (72), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 32 SSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVK 90
S S+PE+VG + A E + + EG VT+D R +RV V+ + +V
Sbjct: 5 SELKSFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVN 64
Query: 91 YTPRIG 96
+ P +G
Sbjct: 65 HVPHVG 70
>pdb|1SBN|I Chain I, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
Length = 70
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 32 SSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVK 90
S S+PE+VG + A E + + EG VT D R +RV V+ + +V
Sbjct: 5 SELKSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTRDLRYNRVRVFYNPGTNVVN 64
Query: 91 YTPRIG 96
+ P +G
Sbjct: 65 HVPHVG 70
>pdb|4B2A|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tga) In Complex With Eglin C
pdb|4B2A|D Chain D, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tga) In Complex With Eglin C
Length = 66
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 32 SSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVK 90
S S+PE+VG + A E + + EG VT D R +RV V+ + +V
Sbjct: 1 SELKSFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVN 60
Query: 91 YTPRIG 96
+ P +G
Sbjct: 61 HVPHVG 66
>pdb|4B1T|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala ( Ta) In Complex With Eglin C
pdb|4B1T|D Chain D, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala ( Ta) In Complex With Eglin C
Length = 70
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 32 SSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVK 90
S S+PE+VG + A E + + EG VT D R +RV V+ + +V
Sbjct: 5 SELKSFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVN 64
Query: 91 YTPRIG 96
+ P +G
Sbjct: 65 HVPHVG 70
>pdb|4B2B|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tgpa) In Complex With Eglin C
pdb|4B2B|D Chain D, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tgpa) In Complex With Eglin C
pdb|4B2C|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tpa) In Complex With Eglin C
pdb|4B2C|D Chain D, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tpa) In Complex With Eglin C
Length = 71
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 32 SSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCDRVWVWVDH-HGIVK 90
S S+PE+VG + A E + + EG VT D R +RV V+ + +V
Sbjct: 6 SELKSFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVN 65
Query: 91 YTPRIG 96
+ P +G
Sbjct: 66 HVPHVG 71
>pdb|3TVQ|A Chain A, Crystal Structure Of Tcm AroCYC COMPLEXED WITH
TRANS-Dihidroquercetin
Length = 169
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 14/58 (24%)
Query: 31 TSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCD---RVWVWVDH 85
T+ +WPEL E A I+R++G +GF+ + R D RVW WV H
Sbjct: 22 TNDIEAWPELFS---EYAEAEILRQDG--------DGFDFRLKTRPDANGRVWEWVSH 68
>pdb|2RES|A Chain A, Tetracenomycin AroCYC MUTANT R69A
Length = 173
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 14/58 (24%)
Query: 31 TSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCD---RVWVWVDH 85
T+ +WPEL E A I+R++G +GF+ + R D RVW WV H
Sbjct: 25 TNDIEAWPELFS---EYAEAEILRQDG--------DGFDFRLKTRPDANGRVWEWVSH 71
>pdb|2RER|A Chain A, Crystal Structure Of The AromataseCYCLASE DOMAIN OF TCMN
From Streptomyces Glaucescens
Length = 173
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 14/58 (24%)
Query: 31 TSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCD---RVWVWVDH 85
T+ +WPEL E A I+R++G +GF+ + R D RVW WV H
Sbjct: 25 TNDIEAWPELFS---EYAEAEILRQDG--------DGFDFRLKTRPDANGRVWEWVSH 71
>pdb|2REZ|A Chain A, Tetracenomycin Aro/cyc Nai Structure
Length = 157
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 14/58 (24%)
Query: 31 TSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYRCD---RVWVWVDH 85
T+ +WPEL E A I+R++G +GF+ + R D RVW WV H
Sbjct: 25 TNDIEAWPELFS---EYAEAEILRQDG--------DGFDFRLKTRPDANGRVWEWVSH 71
>pdb|1CQ4|A Chain A, Ci2 Mutant With Tetraglutamine (mgqqqqgm) Replacing
Met59
Length = 47
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTMDYR 75
K+ WPELVG E A ++I+++ + I++ G VTM +
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMGQQ 43
>pdb|1CIQ|A Chain A, Complex Of Two Fragments Of Ci2, Residues 1-40 And 41-64
Length = 40
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVTM 72
K+ WPELVG E A ++I+++ + I++ G VTM
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTM 40
>pdb|3JXH|C Chain C, Ca-Like Domain Of Human Ptprg
Length = 265
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 25 MEDYCRTSSKSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVT 71
++ Y R + +L G E + + M+ GK VAI++K+ + V+
Sbjct: 34 LDQYARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVS 80
>pdb|1CIR|A Chain A, Complex Of Two Fragments Of Ci2 [(1-40)(Dot)(41-64)]
Length = 40
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 34 KSSWPELVGVKGEVAAEIIMRENGKVVAIIVKEGFEVT 71
K+ WPELVG E A ++I+++ + I++ G VT
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVT 39
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,761,261
Number of Sequences: 62578
Number of extensions: 86931
Number of successful extensions: 276
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 231
Number of HSP's gapped (non-prelim): 48
length of query: 96
length of database: 14,973,337
effective HSP length: 62
effective length of query: 34
effective length of database: 11,093,501
effective search space: 377179034
effective search space used: 377179034
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)