Your job contains 1 sequence.
>039275
MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIELDLSS
YSLSSKTSRYAHSGRIRLARDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTM
VVVLAASSGPGALDFGKSNIFLTTAIIEMYAKM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039275
(153 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093920 - symbol:AT3G15930 "AT3G15930" species... 131 2.9e-11 2
TAIR|locus:2091546 - symbol:AT3G13770 species:3702 "Arabi... 161 7.9e-11 1
TAIR|locus:2206164 - symbol:AT1G31430 species:3702 "Arabi... 140 2.6e-10 2
TAIR|locus:2161018 - symbol:AT5G56310 "AT5G56310" species... 155 2.7e-10 1
TAIR|locus:2195980 - symbol:AT1G77170 "AT1G77170" species... 153 3.5e-10 1
TAIR|locus:2041198 - symbol:SLO1 "SLOW GROWTH 1" species:... 109 4.0e-10 2
TAIR|locus:2077878 - symbol:AT3G08820 "AT3G08820" species... 151 1.1e-09 1
TAIR|locus:2060640 - symbol:OTP81 "ORGANELLE TRANSCRIPT P... 110 2.1e-09 2
TAIR|locus:2205200 - symbol:OTP82 "AT1G08070" species:370... 147 2.9e-09 2
TAIR|locus:2195296 - symbol:AT1G09190 "AT1G09190" species... 107 7.2e-09 2
TAIR|locus:2057630 - symbol:AT2G33680 "AT2G33680" species... 128 1.0e-08 2
TAIR|locus:2038603 - symbol:AT2G27610 "AT2G27610" species... 139 2.8e-08 1
TAIR|locus:2181201 - symbol:AT5G27110 species:3702 "Arabi... 134 7.1e-08 1
TAIR|locus:2086964 - symbol:MEF25 "mitochondrial RNA edit... 133 7.5e-08 1
TAIR|locus:2089333 - symbol:AT3G16610 "AT3G16610" species... 108 8.4e-08 2
TAIR|locus:2205425 - symbol:AT1G68930 "AT1G68930" species... 132 1.3e-07 1
TAIR|locus:2148101 - symbol:AT5G16860 "AT5G16860" species... 122 2.7e-07 2
TAIR|locus:2047017 - symbol:AT2G21090 "AT2G21090" species... 101 2.9e-07 2
TAIR|locus:2054131 - symbol:SLO2 "AT2G13600" species:3702... 106 3.2e-07 2
TAIR|locus:1009023396 - symbol:AT5G40405 "AT5G40405" spec... 127 3.4e-07 1
TAIR|locus:2117084 - symbol:AT4G18840 "AT4G18840" species... 110 4.3e-07 2
TAIR|locus:2090444 - symbol:AT3G22150 "AT3G22150" species... 127 5.0e-07 1
TAIR|locus:2019130 - symbol:OTP87 "organelle transcript p... 127 5.6e-07 1
TAIR|locus:2154855 - symbol:AT5G66520 "AT5G66520" species... 125 5.7e-07 1
TAIR|locus:2025242 - symbol:AT1G77010 species:3702 "Arabi... 125 6.6e-07 1
TAIR|locus:2010012 - symbol:AT1G13410 "AT1G13410" species... 122 8.0e-07 1
TAIR|locus:2154389 - symbol:LPA66 "LOW PSII ACCUMULATION ... 123 9.8e-07 1
TAIR|locus:2140235 - symbol:AT4G02750 species:3702 "Arabi... 124 9.8e-07 1
TAIR|locus:2010652 - symbol:AT1G04840 "AT1G04840" species... 123 1.0e-06 1
TAIR|locus:4515103421 - symbol:AT4G19191 "AT4G19191" spec... 122 1.3e-06 1
TAIR|locus:2100392 - symbol:AT3G47840 species:3702 "Arabi... 121 1.8e-06 1
TAIR|locus:2159238 - symbol:AT5G61800 "AT5G61800" species... 119 1.8e-06 1
TAIR|locus:2054789 - symbol:MEF21 "mitochondrial editing ... 119 2.0e-06 1
TAIR|locus:2150996 - symbol:AT5G15300 "AT5G15300" species... 100 2.1e-06 2
TAIR|locus:2056794 - symbol:REME1 "required for efficienc... 119 2.5e-06 1
TAIR|locus:4010713776 - symbol:AT3G26782 species:3702 "Ar... 119 2.7e-06 1
TAIR|locus:2039817 - symbol:AT2G39620 "AT2G39620" species... 120 2.9e-06 1
TAIR|locus:2007116 - symbol:AT1G69350 "AT1G69350" species... 119 3.4e-06 1
TAIR|locus:2018092 - symbol:MEF9 "AT1G62260" species:3702... 118 3.4e-06 1
TAIR|locus:2125899 - symbol:AT4G33170 species:3702 "Arabi... 120 3.5e-06 1
TAIR|locus:2057574 - symbol:AT2G33760 species:3702 "Arabi... 117 3.7e-06 1
TAIR|locus:2019160 - symbol:AT1G74630 species:3702 "Arabi... 117 4.3e-06 1
TAIR|locus:2045580 - symbol:AT2G42920 species:3702 "Arabi... 116 4.5e-06 1
TAIR|locus:2126352 - symbol:AT4G37380 species:3702 "Arabi... 115 6.9e-06 1
TAIR|locus:2131939 - symbol:MEF29 "AT4G30700" species:370... 116 7.2e-06 1
TAIR|locus:2124137 - symbol:DOT4 "DEFECTIVELY ORGANIZED T... 116 8.0e-06 1
TAIR|locus:2097365 - symbol:AT3G49710 "AT3G49710" species... 115 8.1e-06 1
TAIR|locus:2096414 - symbol:AT3G03580 species:3702 "Arabi... 116 8.2e-06 1
TAIR|locus:2078653 - symbol:AT3G02010 species:3702 "Arabi... 115 9.6e-06 1
TAIR|locus:2118964 - symbol:EMB2758 "embryo defective 275... 103 1.3e-05 2
TAIR|locus:2080727 - symbol:MEF10 "mitochondrial RNA edit... 112 1.4e-05 1
TAIR|locus:2055919 - symbol:AT2G22070 "AT2G22070" species... 112 1.9e-05 1
TAIR|locus:2196583 - symbol:ECB2 "EARLY CHLOROPLAST BIOGE... 112 2.1e-05 1
TAIR|locus:2012517 - symbol:AT1G14470 species:3702 "Arabi... 83 2.2e-05 2
TAIR|locus:2095289 - symbol:AT3G09040 "AT3G09040" species... 112 2.6e-05 1
TAIR|locus:2027554 - symbol:AT1G56690 species:3702 "Arabi... 109 3.5e-05 1
TAIR|locus:4010713895 - symbol:AT4G21065 "AT4G21065" spec... 108 3.6e-05 1
TAIR|locus:2198678 - symbol:PDE247 "pigment defective 247... 107 3.6e-05 1
TAIR|locus:2121055 - symbol:AT4G38010 "AT4G38010" species... 107 4.2e-05 1
TAIR|locus:2198546 - symbol:AT1G20230 "AT1G20230" species... 90 4.4e-05 2
TAIR|locus:2095487 - symbol:AT3G28660 "AT3G28660" species... 106 4.7e-05 1
TAIR|locus:2124603 - symbol:AT4G18520 species:3702 "Arabi... 107 4.8e-05 1
TAIR|locus:2167593 - symbol:AT5G44230 species:3702 "Arabi... 98 5.1e-05 2
TAIR|locus:2094812 - symbol:AT3G29230 "AT3G29230" species... 106 5.9e-05 1
TAIR|locus:2056740 - symbol:OTP85 "ORGANELLE TRANSCRIPT P... 106 5.9e-05 1
TAIR|locus:2202074 - symbol:CRR22 "CHLORORESPIRATORY REDU... 107 6.7e-05 1
TAIR|locus:2122634 - symbol:OTP70 "AT4G25270" species:370... 104 8.1e-05 1
TAIR|locus:2061310 - symbol:GUN1 "AT2G31400" species:3702... 93 9.1e-05 2
TAIR|locus:2159602 - symbol:AT5G08510 "AT5G08510" species... 97 0.00012 2
TAIR|locus:2119440 - symbol:AT4G13650 species:3702 "Arabi... 106 0.00012 1
TAIR|locus:2130354 - symbol:AT4G14820 "AT4G14820" species... 104 0.00012 1
TAIR|locus:2013079 - symbol:AT1G19720 "AT1G19720" species... 105 0.00012 1
TAIR|locus:2020703 - symbol:AT1G03540 species:3702 "Arabi... 103 0.00013 1
TAIR|locus:2198811 - symbol:MEF3 "AT1G06140" species:3702... 102 0.00014 1
TAIR|locus:2084963 - symbol:AT3G04750 "AT3G04750" species... 102 0.00018 1
TAIR|locus:2168963 - symbol:AT5G47460 "AT5G47460" species... 86 0.00019 2
TAIR|locus:2007888 - symbol:AT1G17630 species:3702 "Arabi... 102 0.00020 1
TAIR|locus:2032955 - symbol:AT1G25360 "AT1G25360" species... 97 0.00033 2
TAIR|locus:2089591 - symbol:AT3G14730 "AT3G14730" species... 101 0.00038 2
TAIR|locus:2176927 - symbol:AT5G52850 species:3702 "Arabi... 88 0.00040 2
>TAIR|locus:2093920 [details] [associations]
symbol:AT3G15930 "AT3G15930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 eggNOG:NOG235387 EMBL:AB026653 IPI:IPI00541778
RefSeq:NP_188214.1 UniGene:At.53331 ProteinModelPortal:Q9LSB8
SMR:Q9LSB8 EnsemblPlants:AT3G15930.1 GeneID:820836
KEGG:ath:AT3G15930 GeneFarm:3861 TAIR:At3g15930 InParanoid:Q9LSB8
OMA:DEFTMVS PhylomeDB:Q9LSB8 Genevestigator:Q9LSB8 Uniprot:Q9LSB8
Length = 687
Score = 131 (51.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG--- 136
RD +S MI GY +AG FNE+LE F +++S G+ DE TMV VL A + G+L+ G
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390
Query: 137 ---------KSNIFLTTAIIEMYAK 152
K+++ + A+I+MY K
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFK 415
Score = 108 (43.1 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGA 45
MI GY +AG FNE+LE F +++S G+ DE TMV VLTA + G+
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Score = 82 (33.9 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALD 134
RD + AM+ G + G+ EA++ F +++ + + D++T + VL+A + G +D
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Score = 35 (17.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 81 DPVSCKAMISGYSQAGRFNEALEPFGKLES 110
D ++ ++S + +G ++A + F K+ S
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRS 497
>TAIR|locus:2091546 [details] [associations]
symbol:AT3G13770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP001307 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00518949 RefSeq:NP_187990.1
UniGene:At.43032 UniGene:At.53299 ProteinModelPortal:Q9LIC3
SMR:Q9LIC3 EnsemblPlants:AT3G13770.1 GeneID:820586
KEGG:ath:AT3G13770 GeneFarm:3533 TAIR:At3g13770 eggNOG:NOG263023
InParanoid:Q9LIC3 OMA:NEFTFAT PhylomeDB:Q9LIC3
ProtClustDB:CLSN2684809 Genevestigator:Q9LIC3 Uniprot:Q9LIC3
Length = 628
Score = 161 (61.7 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 55/151 (36%), Positives = 71/151 (47%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLT----ASS-GPGAWILAKELQIE 55
MIS YSQ G +EAL F ++ +E T VLT AS G G I ++
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
YA +G+I+ AR D VSC A+I+GY+Q G EALE F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
+L S G+ + VT +L A SG LD GK
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/156 (33%), Positives = 71/156 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKE-----LQIE 55
+I+GY+Q G EALE F +L S G+ + VT +LTA SG K+ L+ E
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---D--P----VSCKAMISGYSQAGRFNEALEPFG 106
Y+ G + AR D P +S AM+ GYS+ G E LE F
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 107 KL-ESLGVHTDEVTMVVVLAASSGPGALDFGKSNIF 141
+ + V D VT++ VL+ S D G NIF
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL-NIF 379
>TAIR|locus:2206164 [details] [associations]
symbol:AT1G31430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AC027135 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518213 PIR:C86440 RefSeq:NP_174428.1
UniGene:At.40342 UniGene:At.5353 ProteinModelPortal:Q9C866
SMR:Q9C866 PaxDb:Q9C866 EnsemblPlants:AT1G31430.1 GeneID:840033
KEGG:ath:AT1G31430 GeneFarm:3605 TAIR:At1g31430 eggNOG:NOG280522
InParanoid:Q9C866 OMA:NGYVQFN PhylomeDB:Q9C866
ProtClustDB:CLSN2682384 Genevestigator:Q9C866 Uniprot:Q9C866
Length = 570
Score = 140 (54.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 47/155 (30%), Positives = 71/155 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLT--ASSGP---GAWILAKELQIE 55
M++GY Q RF+EALE F +++ G+ D +V +LT A +G G WI +
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR 309
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G I A RD S ++I G + G AL+ +
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIF 141
++E++GV D +T V VL A + G + G+ IF
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRK-IF 403
Score = 106 (42.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK-- 137
+D V AM++GY Q RF+EALE F +++ G+ D +V +L + GAL+ GK
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 138 ------SNIFLT----TAIIEMYAK 152
+ + + TA+++MYAK
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAK 326
Score = 38 (18.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 1 MISGYSQAGRFNEA 14
M+ GY GR +EA
Sbjct: 219 MVFGYVSTGRIDEA 232
>TAIR|locus:2161018 [details] [associations]
symbol:AT5G56310 "AT5G56310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 EMBL:AB009049
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:AK229016 IPI:IPI00527231
RefSeq:NP_200442.1 UniGene:At.70454 ProteinModelPortal:Q9FMA1
SMR:Q9FMA1 PRIDE:Q9FMA1 EnsemblPlants:AT5G56310.1 GeneID:835730
KEGG:ath:AT5G56310 GeneFarm:4045 TAIR:At5g56310 eggNOG:NOG310822
InParanoid:Q9FMA1 OMA:KANAAIW PhylomeDB:Q9FMA1
ProtClustDB:CLSN2687172 Genevestigator:Q9FMA1 Uniprot:Q9FMA1
Length = 530
Score = 155 (59.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 46/151 (30%), Positives = 74/151 (49%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL--QIEXXX 58
+ISGY+++GR +EA+E F ++ V DEVT++ VL+A + G+ L + + ++
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG 280
Query: 59 XXXXXXXXXX---RYAHSGRIRLARDPVSC---------KAMISGYSQAGRFNEALEPFG 106
YA SG I A D C +I+G + G EAL F
Sbjct: 281 MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFN 340
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
++ GV ++VT + +L+A S G +D GK
Sbjct: 341 RMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371
Score = 121 (47.7 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS- 138
R+ VS +ISGY+++GR +EA+E F ++ V DEVT++ VL+A + G+L+ G+
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 139 ---------N--IFLTTAIIEMYAK 152
N + L A+I+MYAK
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAK 297
Score = 35 (17.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 1 MISGYSQAGRFNEA 14
+++GY + G +EA
Sbjct: 188 LLAGYGKVGEMDEA 201
>TAIR|locus:2195980 [details] [associations]
symbol:AT1G77170 "AT1G77170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC004260 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518933 RefSeq:NP_177842.1
UniGene:At.21362 ProteinModelPortal:Q3ECB8 PaxDb:Q3ECB8
EnsemblPlants:AT1G77170.1 GeneID:844054 KEGG:ath:AT1G77170
GeneFarm:3631 TAIR:At1g77170 eggNOG:NOG311468 InParanoid:Q3ECB8
OMA:LEPWNDG PhylomeDB:Q3ECB8 ProtClustDB:CLSN2682973
Genevestigator:Q3ECB8 Uniprot:Q3ECB8
Length = 467
Score = 153 (58.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 51/165 (30%), Positives = 77/165 (46%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-------Q 53
+I G + AGR NEA+E F ++ G+ D+ TMV V + G G LA +L +
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 54 IEXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEP 104
E Y GR+ LA R+ VS +MI GY+ G EALE
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALEC 308
Query: 105 FGKLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIFLTTAIIEM 149
F ++ GV +++T V VL+A G ++ GK+ + + E+
Sbjct: 309 FRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFEL 353
Score = 100 (40.3 bits), Expect = 0.00074, P = 0.00074
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 84 SCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG------- 136
S A+I G + AGR NEA+E F ++ G+ D+ TMV V A+ G G L
Sbjct: 185 SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCV 244
Query: 137 -------KSNIFLTTAIIEMYAK 152
KS+I + ++I+MY K
Sbjct: 245 LQAKTEEKSDIMMLNSLIDMYGK 267
>TAIR|locus:2041198 [details] [associations]
symbol:SLO1 "SLOW GROWTH 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006592 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AY064984 IPI:IPI00525356
PIR:C84612 RefSeq:NP_179827.1 UniGene:At.28296
ProteinModelPortal:Q9SJZ3 SMR:Q9SJZ3 PRIDE:Q9SJZ3
EnsemblPlants:AT2G22410.1 GeneID:816772 KEGG:ath:AT2G22410
GeneFarm:3692 TAIR:At2g22410 eggNOG:NOG314086 InParanoid:Q9SJZ3
OMA:HCLSACS PhylomeDB:Q9SJZ3 ProtClustDB:CLSN2683739
Genevestigator:Q9SJZ3 Uniprot:Q9SJZ3
Length = 681
Score = 109 (43.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 40/151 (26%), Positives = 65/151 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGA-----WILAKELQIE 55
MI G QA R +AL F ++++ DE+TM+ L+A S GA WI +
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G I A R+ ++ A+I G + G + A+ F
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
++ G+ DE+T + +L+A G + G+
Sbjct: 480 EMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Score = 107 (42.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 31/85 (36%), Positives = 45/85 (52%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG--- 136
+D V AMI G QA R +AL F ++++ DE+TM+ L+A S GALD G
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 137 ---------KSNIFLTTAIIEMYAK 152
N+ L T++++MYAK
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAK 436
Score = 72 (30.4 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKE 51
+I+GY + G +A+ + +ES GV D+VTM+ ++++ S G KE
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 278
>TAIR|locus:2077878 [details] [associations]
symbol:AT3G08820 "AT3G08820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AC012562
PROSITE:PS51375 EMBL:AC010871 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00518512
RefSeq:NP_187494.1 UniGene:At.65071 ProteinModelPortal:Q9SR82
SMR:Q9SR82 PaxDb:Q9SR82 PRIDE:Q9SR82 EnsemblPlants:AT3G08820.1
GeneID:820029 KEGG:ath:AT3G08820 GeneFarm:3532 TAIR:At3g08820
eggNOG:NOG303126 InParanoid:Q9SR82 OMA:LIALEPW PhylomeDB:Q9SR82
ProtClustDB:CLSN2684962 Genevestigator:Q9SR82 Uniprot:Q9SR82
Length = 685
Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/178 (28%), Positives = 82/178 (46%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA-----SSGPGAWILAKELQIE 55
+ SGY+ +GR EA++ F K+ +GV D +V VL+A G WI+ ++E
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
YA G++ AR D V+ MI GY+ E +E F
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK------------SNIFLTTAIIEMYAK 152
++ + D+ ++V L++ + GALD G+ +N+F+ A+I+MYAK
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Score = 116 (45.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 47/178 (26%), Positives = 77/178 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-----QIE 55
+I+G+ F+E L+ F + G++ T +VL A + + L +L +
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ SGR+ A R V+ A+ SGY+ +GR EA++ F
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK------------SNIFLTTAIIEMYAK 152
K+ +GV D +V VL+A G LD G+ N F+ T ++ +YAK
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAK 259
>TAIR|locus:2060640 [details] [associations]
symbol:OTP81 "ORGANELLE TRANSCRIPT PROCESSING 81"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC005496 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.38446 UniGene:At.49361 GO:GO:0031425
HOGENOM:HOG000237569 EMBL:AY500319 IPI:IPI00520465 PIR:C84700
RefSeq:NP_180537.1 ProteinModelPortal:O82380 SMR:O82380
PRIDE:O82380 EnsemblPlants:AT2G29760.1 GeneID:817526
KEGG:ath:AT2G29760 GeneFarm:3355 TAIR:At2g29760 eggNOG:NOG235387
InParanoid:O82380 OMA:FVWSAMI PhylomeDB:O82380
ProtClustDB:CLSN2683829 Genevestigator:O82380 Uniprot:O82380
Length = 738
Score = 110 (43.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS- 138
+D VS +MI+G+ Q G ++ALE F K+ES V VTMV VL+A + L+FG+
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 139 -----------NIFLTTAIIEMYAK 152
N+ L A+++MY K
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTK 279
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 41/153 (26%), Positives = 67/153 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLE-SLGVHTDEVTMVVVLTASSGPGA-----WILAKELQI 54
+IS Y Q G+ NEAL F +L+ + +++T+V L+A + GA WI + +
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 55 EXXXXXXXXXXXXXRYAHSGRIRLARDPVSC---------KAMISGYSQAGRFNEALEPF 105
Y+ G + +R+ + AMI G + G NEA++ F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFGKS 138
K++ V + VT V A S G +D +S
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLE-SLGVHTDEVTMVVVLAASSGPGALDFGK- 137
+D V+ A+IS Y Q G+ NEAL F +L+ + +++T+V L+A + GAL+ G+
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 138 -----------SNIFLTTAIIEMYAK 152
N +T+A+I MY+K
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSK 412
Score = 81 (33.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA 39
MI+G+ Q G ++ALE F K+ES V VTMV VL+A
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
>TAIR|locus:2205200 [details] [associations]
symbol:OTP82 "AT1G08070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0031425 "chloroplast RNA
processing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC026875
GO:GO:0031425 Pfam:PF12854 Pfam:PF13041 eggNOG:KOG4197
HOGENOM:HOG000237569 IPI:IPI00516672 RefSeq:NP_172286.1
UniGene:At.43030 ProteinModelPortal:Q9LN01 SMR:Q9LN01
EnsemblPlants:AT1G08070.1 GeneID:837325 KEGG:ath:AT1G08070
GeneFarm:3172 TAIR:At1g08070 InParanoid:Q9LN01 OMA:EEWKEGA
PhylomeDB:Q9LN01 ProtClustDB:CLSN2682772 Genevestigator:Q9LN01
Uniprot:Q9LN01
Length = 741
Score = 147 (56.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIEXXXXX 60
MISGY++ G + EALE F + V DE TMV V++A + G+ L +++ +
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296
Query: 61 XXXXXXXXR-----YAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G + A +D +S +I GY+ + EAL F
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
++ G ++VTM+ +L A + GA+D G+
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Score = 134 (52.2 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 49/171 (28%), Positives = 78/171 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGA-----WI---LAKEL 52
+I GY+ + EAL F ++ G ++VTM+ +L A + GA WI + K L
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 53 QIEXXXXXXXXXXXXXRYAHSGRIRLARDPV---------SCKAMISGYSQAGRFNEALE 103
+ YA G I A S AMI G++ GR + + +
Sbjct: 398 K-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 104 PFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIFLT-TAIIEMYAKM 153
F ++ +G+ D++T V +L+A S G LD G+ +IF T T +M K+
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR-HIFRTMTQDYKMTPKL 506
Score = 130 (50.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK-- 137
+D VS AMISGY++ G + EALE F + V DE TMV V++A + G+++ G+
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 138 ----------SNIFLTTAIIEMYAK 152
SN+ + A+I++Y+K
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSK 313
Score = 41 (19.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPG 44
+IS Y Q GR +A + F K H D V+ ++ + G
Sbjct: 175 LISMYVQNGRLEDAHKVFDK----SPHRDVVSYTALIKGYASRG 214
>TAIR|locus:2195296 [details] [associations]
symbol:AT1G09190 "AT1G09190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC003114 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
EMBL:BT003981 IPI:IPI00534482 PIR:E86224 RefSeq:NP_172391.2
UniGene:At.42236 ProteinModelPortal:O80488
EnsemblPlants:AT1G09190.1 GeneID:837439 KEGG:ath:AT1G09190
GeneFarm:3632 TAIR:At1g09190 eggNOG:NOG278020 InParanoid:O80488
OMA:YNTLITA PhylomeDB:O80488 ProtClustDB:CLSN2708431
Genevestigator:O80488 Uniprot:O80488
Length = 484
Score = 107 (42.7 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
R VS +MIS S+ GR EALE F ++ G DE T+V VL S+ G LD GK
Sbjct: 197 RSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGK 254
Score = 56 (24.8 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS 41
MI YS G E+L F ++S G+ DE T +L + S
Sbjct: 73 MIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCS 113
>TAIR|locus:2057630 [details] [associations]
symbol:AT2G33680 "AT2G33680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237570
IPI:IPI00531746 PIR:C84748 RefSeq:NP_180924.1 UniGene:At.66302
ProteinModelPortal:P93005 SMR:P93005 EnsemblPlants:AT2G33680.1
GeneID:817933 KEGG:ath:AT2G33680 GeneFarm:3665 TAIR:At2g33680
eggNOG:NOG291314 InParanoid:P93005 OMA:NSITWSA PhylomeDB:P93005
ProtClustDB:CLSN2683505 Genevestigator:P93005 Uniprot:P93005
Length = 727
Score = 128 (50.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 44/151 (29%), Positives = 69/151 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSG-----PGAWILAKELQIE 55
M++GYSQ G EA++ F ++ S G+ E T+V VL A S G + + L++
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLARDPVSC---------KAMISGYSQAGRFNEALEPFG 106
YA +G + AR C ++ISGY Q EAL +
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
++++ G+ ++ TM VL A S L+ GK
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Score = 120 (47.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 51/180 (28%), Positives = 82/180 (45%)
Query: 1 MISGYSQAGRFNEALEPFG---KLESLGVHTDEV-TMVVVLTASS---GPGAWILAKELQ 53
M+SGY+ GR EA++ F + + G +D V T V+ A++ G G I ++
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 54 IEXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEP 104
Y+ + A R+ ++ AM++GYSQ G EA++
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 105 FGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS------------NIFLTTAIIEMYAK 152
F ++ S G+ E T+V VL A S L+ GK ++F TTA+++MYAK
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Score = 102 (41.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG 136
+D VS AMISG S G+ +EALE F ++ + G+ D+VT V +++A S G ++ G
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 64 (27.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL 52
+ISGY Q EAL + ++++ G+ ++ TM VL A S L K++
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Score = 38 (18.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 1 MISGYSQAGRFNEA---LEPFGKLESLGVHTDEVTMVVVLTASS 41
+I+GYSQ G + + ++ F ++ + + + T+ + A S
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
>TAIR|locus:2038603 [details] [associations]
symbol:AT2G27610 "AT2G27610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006232 EMBL:AC005824 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00547006 PIR:G84674
RefSeq:NP_180329.1 UniGene:At.13265 UniGene:At.66363
ProteinModelPortal:Q9ZUW3 SMR:Q9ZUW3 PRIDE:Q9ZUW3
EnsemblPlants:AT2G27610.1 GeneID:817307 KEGG:ath:AT2G27610
GeneFarm:3453 TAIR:At2g27610 eggNOG:NOG320969 InParanoid:Q9ZUW3
OMA:IVAWSAM PhylomeDB:Q9ZUW3 ProtClustDB:CLSN2683516
Genevestigator:Q9ZUW3 Uniprot:Q9ZUW3
Length = 868
Score = 139 (54.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 44/152 (28%), Positives = 69/152 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLT------ASSGPGAWILAKELQI 54
M++GY+Q G A++ FG+L G+ +E T +L AS G G ++
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 55 EXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPF 105
YA G I A +D VS +MISGY+Q G+ +AL+ F
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
+++ V D VT + V AA + G ++ G+
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Score = 127 (49.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 48/176 (27%), Positives = 80/176 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS--GPGAWILAKELQIEXXX 58
MISG+ Q EA++ F +++ GV +E T V+LTA P + A+ ++
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE-VHAQVVKTNYER 426
Query: 59 XXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFGKLE 109
Y G++ A +D V+ AM++GY+Q G A++ FG+L
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 110 SLGVHTDEVTMVVVLA------ASSGPGALDFG-------KSNIFLTTAIIEMYAK 152
G+ +E T +L AS G G G S++ +++A++ MYAK
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
>TAIR|locus:2181201 [details] [associations]
symbol:AT5G27110 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 EMBL:AF007271 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00518722 PIR:T01808
RefSeq:NP_198063.1 UniGene:At.65555 UniGene:At.74336
ProteinModelPortal:O04659 SMR:O04659 STRING:O04659 PaxDb:O04659
PRIDE:O04659 EnsemblPlants:AT5G27110.1 GeneID:832769
KEGG:ath:AT5G27110 GeneFarm:4221 TAIR:At5g27110 eggNOG:NOG251542
OMA:SILMACS PhylomeDB:O04659 ProtClustDB:CLSN2686965
Genevestigator:O04659 Uniprot:O04659
Length = 691
Score = 134 (52.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 44/150 (29%), Positives = 66/150 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIEXXXXX 60
MIS Y G + +A+E + ++ S+GV D VT VL A S A K++ +
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 61 XXX-----XXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G + A +D VS MIS Y G+ EAL F
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
+++ G+ D VT++ VL+A G +D G
Sbjct: 501 EMQKFGLKPDGVTLLAVLSACGHAGLIDEG 530
Score = 90 (36.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
RD S +IS + Q+G +ALE FG++ES G + V++ V ++A S L+ GK
Sbjct: 171 RDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGK 228
Score = 53 (23.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHT-DEVTMVVVLTASSGPGAWILAK 50
++SGYS+ F++ LE F +L + + D T V+ A G L +
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
>TAIR|locus:2086964 [details] [associations]
symbol:MEF25 "mitochondrial RNA editing factor 25"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AP000412 IPI:IPI00521244 RefSeq:NP_189142.1 UniGene:At.53485
ProteinModelPortal:Q9LJR6 SMR:Q9LJR6 PRIDE:Q9LJR6
EnsemblPlants:AT3G25060.1 GeneID:822097 KEGG:ath:AT3G25060
GeneFarm:3870 TAIR:At3g25060 eggNOG:NOG267249 InParanoid:Q9LJR6
OMA:DHATFAS PhylomeDB:Q9LJR6 ProtClustDB:CLSN2915355
Genevestigator:Q9LJR6 Uniprot:Q9LJR6
Length = 601
Score = 133 (51.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-----QIE 55
M++G++QAG+ +A+E + ++++ G D V M+ +L AS G + + + +
Sbjct: 188 MVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTG 247
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G I +A + VS ++ISG++Q G N+A E
Sbjct: 248 LPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVV 307
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG--------KSNIF---LTTAIIEMYAK 152
+++SLG D VT+V VL A S G+L G K ++ TA+++MY+K
Sbjct: 308 EMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSK 364
Score = 105 (42.0 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 40/150 (26%), Positives = 62/150 (41%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQI----EX 56
+ISG++Q G N+A E +++SLG D VT+V VL A S G+ + +
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 57 XXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFGK 107
Y+ G + +R D V MIS Y G E + F K
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 108 LESLGVHTDEVTMVVVLAASSGPGALDFGK 137
+ + D T +L+A S G ++ G+
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQ 438
Score = 99 (39.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS- 138
RD + M++G++QAG+ +A+E + ++++ G D V M+ +L AS G G+S
Sbjct: 180 RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239
Query: 139 -----------NIFLTTAIIEMYAKM 153
N+ + T++++MYAK+
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKV 265
Score = 52 (23.4 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 21/93 (22%), Positives = 37/93 (39%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWI-LAKELQIEXXXX 59
+I+ + G + A + F +L GV +M+VV + P + L ++ E
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYN-SMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 60 XXXXXXXXXRYAHSGRIRLARDPVSCKAMISGY 92
+ SG + + V CKA+ GY
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGY 147
>TAIR|locus:2089333 [details] [associations]
symbol:AT3G16610 "AT3G16610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006302 "double-strand break repair" evidence=RCA]
[GO:0006312 "mitotic recombination" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AB022217
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00549054 RefSeq:NP_188283.1 UniGene:At.38870
UniGene:At.66463 ProteinModelPortal:Q9LUS3 SMR:Q9LUS3 PaxDb:Q9LUS3
PRIDE:Q9LUS3 EnsemblPlants:AT3G16610.1 GeneID:820912
KEGG:ath:AT3G16610 GeneFarm:4237 TAIR:At3g16610 eggNOG:NOG326174
InParanoid:Q9LUS3 OMA:KNEVTWS PhylomeDB:Q9LUS3
ProtClustDB:CLSN2913360 Genevestigator:Q9LUS3 Uniprot:Q9LUS3
Length = 654
Score = 108 (43.1 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
RD VS M+ G+ G EAL F ++ GV+ DEVT++ +L+A S G +D GK
Sbjct: 473 RDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGK 530
Score = 48 (22.0 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS 41
+I+G R E+ F ++ + G+ D T++ VLTA S
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Score = 33 (16.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMV 34
MI GY + EA E F ++ + D V MV
Sbjct: 277 MIGGYVENEMIKEAGEVFFQM----LVNDNVAMV 306
>TAIR|locus:2205425 [details] [associations]
symbol:AT1G68930 "AT1G68930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011665 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00528975 PIR:H96713 RefSeq:NP_177059.1 UniGene:At.52442
ProteinModelPortal:Q9CAA8 SMR:Q9CAA8 EnsemblPlants:AT1G68930.1
GeneID:843226 KEGG:ath:AT1G68930 GeneFarm:3231 TAIR:At1g68930
eggNOG:NOG300864 HOGENOM:HOG000237570 InParanoid:Q9CAA8 OMA:EEGAQFH
PhylomeDB:Q9CAA8 ProtClustDB:CLSN2682344 Genevestigator:Q9CAA8
Uniprot:Q9CAA8
Length = 743
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/159 (28%), Positives = 70/159 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSG-----PGAWILAKELQIE 55
M+ GY Q GR EA++ F ++ G+ D T+ ++A + G+ K +
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401
Query: 56 XXXXXXXXXXXXXRYAHSGRI----RL-----ARDPVSCKAMISGYSQAGRFNEALEPFG 106
Y G I RL RD VS AM+S Y+Q GR E ++ F
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD 461
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIFLTTA 145
K+ G+ D VT+ V++A S G ++ G+ L T+
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Score = 101 (40.6 bits), Expect = 0.00080, P = 0.00080
Identities = 40/150 (26%), Positives = 65/150 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ---IEXX 57
MI G +Q G EA+E F +++ G+ D+ VL A G GA K++ I
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 58 XXXXXXXXXXX----------RYAHSGRIRLA-RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA + R+ ++ VS AM+ GY Q GR EA++ F
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
++ G+ D T+ ++A + +L+ G
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Score = 100 (40.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 78 LARDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
+ +D VS AMI G +Q G EA+E F +++ G+ D+ VL A G GA++ GK
Sbjct: 231 MEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGK 290
Query: 138 S------------NIFLTTAIIEMYAK 152
+I++ +A+I+MY K
Sbjct: 291 QIHACIIRTNFQDHIYVGSALIDMYCK 317
Score = 56 (24.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 1 MISGYSQAGRFNEALEPFGKL-ESLGVHTDEVTMVVVLTASSGPGAWILAKEL 52
+I GYS +G A++ + + + VT++ +L SS G L K++
Sbjct: 109 LIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQI 161
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPG 44
++ YS+AG +E F KL D VT V++ S G
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPD----RDGVTWNVLIEGYSLSG 117
>TAIR|locus:2148101 [details] [associations]
symbol:AT5G16860 "AT5G16860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AL391141
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00533068 PIR:T51541
RefSeq:NP_197188.1 UniGene:At.54872 ProteinModelPortal:Q9LFL5
SMR:Q9LFL5 EnsemblPlants:AT5G16860.1 GeneID:831549
KEGG:ath:AT5G16860 GeneFarm:3540 TAIR:At5g16860 eggNOG:NOG251129
InParanoid:Q9LFL5 OMA:FTISCAL PhylomeDB:Q9LFL5
ProtClustDB:CLSN2686178 Genevestigator:Q9LFL5 Uniprot:Q9LFL5
Length = 850
Score = 122 (48.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 46/163 (28%), Positives = 70/163 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLES-LGVHTDEVTMVVVLTASSGPGAWILAKELQI----- 54
+I Y++ G+ ALE F ++ + G D +T+V VL + G L K+L
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 55 EXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPF 105
E YA G + A +D VS AM++GYSQ GRF +A+ F
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 106 GKLESLGVHTDEVTMVVVLA--ASSGPGALDFGKSNIFLTTAI 146
K++ + D VT ++ A G G G L++ I
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Score = 93 (37.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 78 LARDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG 136
+A++ V+ ++++GY G EAL F ++ +G D VT++VVL A S G +D G
Sbjct: 540 MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Score = 82 (33.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 2 ISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL 52
ISGY+Q G EAL ++ S G+ +EVT++ VL+ + GA + KE+
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Score = 81 (33.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKL--ESLGVHTDEVTMVVVLAASSGPGALDFGK 137
RD V+ MI GYSQ G N+ALE ++ E + T+ L A + AL GK
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 138 S-------N------IFLTTAIIEMYAK 152
N +F++ +I+MYAK
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAK 525
Score = 58 (25.5 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 1 MISGYSQAGRFNEALEPFGKL--ESLGVHTDEVTMVVVLTASSGPGAWILAKEL 52
MI GYSQ G N+ALE ++ E + T+ L A + A + K++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI 499
>TAIR|locus:2047017 [details] [associations]
symbol:AT2G21090 "AT2G21090" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC006264
Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX820424
IPI:IPI00532746 PIR:A84597 RefSeq:NP_179705.1 UniGene:At.49547
ProteinModelPortal:Q9SKQ4 SMR:Q9SKQ4 STRING:Q9SKQ4
EnsemblPlants:AT2G21090.1 GeneID:816644 KEGG:ath:AT2G21090
GeneFarm:3691 TAIR:At2g21090 eggNOG:NOG309199 InParanoid:Q9SKQ4
OMA:FSSCLCA PhylomeDB:Q9SKQ4 ProtClustDB:CLSN2683569
Genevestigator:Q9SKQ4 Uniprot:Q9SKQ4
Length = 597
Score = 101 (40.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS- 138
++PVS A+I+GY + G N AL+ F K+ +LGV ++ T L AS+ +L GK
Sbjct: 274 KNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 139 -----------NIFLTTAIIEMYAK 152
N + +++I+MY+K
Sbjct: 334 HGYMIRTNVRPNAIVISSLIDMYSK 358
Score = 101 (40.6 bits), Expect = 0.00061, P = 0.00061
Identities = 40/151 (26%), Positives = 64/151 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-----QIE 55
+I+GY + G N AL+ F K+ +LGV ++ T L AS+ + KE+ +
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 56 XXXXXXXXXXXXXRYAHSGRI-------RLARDPVSC---KAMISGYSQAGRFNEALEPF 105
Y+ SG + R+ D C MIS +Q G ++AL
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFG 136
+ V + T+VV+L A S G ++ G
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEG 432
Score = 58 (25.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA 39
M+ GY+Q G +EAL + + G+ +E + +LTA
Sbjct: 150 MVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188
Score = 34 (17.0 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVV 35
M+SGY ++G A F + V + TMV+
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWN-TMVI 152
>TAIR|locus:2054131 [details] [associations]
symbol:SLO2 "AT2G13600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0010182 "sugar mediated
signaling pathway" evidence=IMP] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007063
GO:GO:0010182 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 GO:GO:0080156
IPI:IPI00529256 PIR:H84508 RefSeq:NP_178983.1 UniGene:At.52726
ProteinModelPortal:Q9SIT7 SMR:Q9SIT7 EnsemblPlants:AT2G13600.1
GeneID:815845 KEGG:ath:AT2G13600 GeneFarm:3687 TAIR:At2g13600
eggNOG:NOG311224 InParanoid:Q9SIT7 OMA:GFAQHDR PhylomeDB:Q9SIT7
ProtClustDB:CLSN2683340 Genevestigator:Q9SIT7 Uniprot:Q9SIT7
Length = 697
Score = 106 (42.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 75 RIRLARDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALD 134
R + RD VS AMI G++Q G NEALE F ++ G D +TM+ VL+A G ++
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVE 510
Query: 135 FGK 137
G+
Sbjct: 511 EGR 513
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 46/179 (25%), Positives = 76/179 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSG-----PGAWILAKELQIE 55
M+SG++Q R EAL F + G +E + VL+A SG G + + +
Sbjct: 123 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 182
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G + A R+ VS ++I+ + Q G EAL+ F
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 242
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG-------------KSNIFLTTAIIEMYAK 152
+ V DEVT+ V++A + A+ G +++I L+ A ++MYAK
Sbjct: 243 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Score = 45 (20.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA 39
+I+GY+Q G EAL F L+ V + +L A
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 395
Score = 42 (19.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHT 28
+I YS+ G + + F K+ ++T
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYT 88
>TAIR|locus:1009023396 [details] [associations]
symbol:AT5G40405 "AT5G40405" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006702 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00656840 RefSeq:NP_001031987.1
UniGene:At.63338 ProteinModelPortal:Q9FND7 PaxDb:Q9FND7
EnsemblPlants:AT5G40405.1 GeneID:3771385 KEGG:ath:AT5G40405
GeneFarm:3177 TAIR:At5g40405 eggNOG:NOG250628 OMA:LETANHG
PhylomeDB:Q9FND7 ProtClustDB:CLSN2918762 Genevestigator:Q9FND7
Uniprot:Q9FND7
Length = 612
Score = 127 (49.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 33/85 (38%), Positives = 47/85 (55%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG--- 136
RDP++ AMISGY+Q G EAL F ++ GV + V M+ VL+A + GALD G
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA 262
Query: 137 ---------KSNIFLTTAIIEMYAK 152
K + L T ++++YAK
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAK 287
>TAIR|locus:2117084 [details] [associations]
symbol:AT4G18840 "AT4G18840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL021711 EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00520324 PIR:E85212
PIR:T05021 RefSeq:NP_193619.1 UniGene:At.65398
ProteinModelPortal:O49399 SMR:O49399 PRIDE:O49399
EnsemblPlants:AT4G18840.1 GeneID:827618 KEGG:ath:AT4G18840
GeneFarm:4035 TAIR:At4g18840 eggNOG:NOG265885 InParanoid:O49399
OMA:SQGEWVH PhylomeDB:O49399 ProtClustDB:CLSN2685461
Genevestigator:O49399 Uniprot:O49399
Length = 545
Score = 110 (43.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGK-LESLGVHTDEVTMVVVLAASSGPGALDFG-- 136
RD VS AM++ Y+ G +NE LE F K L+ D T+V VL+A + G+L G
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEW 325
Query: 137 ------KSNI----FLTTAIIEMYAK 152
K I FL TA+++MY+K
Sbjct: 326 VHVYIDKHGIEIEGFLATALVDMYSK 351
Score = 101 (40.6 bits), Expect = 0.00054, P = 0.00054
Identities = 49/178 (27%), Positives = 77/178 (43%)
Query: 1 MISGYSQAGRFNEALEPFGK-LESLGVHTDEVTMVVVLTA-----SSGPGAWI---LAKE 51
M++ Y+ G +NE LE F K L+ D T+V VL+A S G W+ + K
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 52 -LQIEXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEA 101
++IE Y+ G+I A RD + ++IS S G +A
Sbjct: 334 GIEIEGFLATALVDM----YSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDA 389
Query: 102 LEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK------SNIFLTTAIIEMYAKM 153
LE F ++ G + +T + VL+A + G LD + S+++ IE Y M
Sbjct: 390 LEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCM 447
Score = 37 (18.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHT 28
++S Y + G +EA F ++E V +
Sbjct: 212 LLSAYLEKGLVDEARALFDEMEERNVES 239
>TAIR|locus:2090444 [details] [associations]
symbol:AT3G22150 "AT3G22150" species:3702 "Arabidopsis
thaliana" [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AP001306 Pfam:PF13041
EMBL:AK229803 IPI:IPI00524640 RefSeq:NP_188854.1 UniGene:At.37924
ProteinModelPortal:Q9LIE7 SMR:Q9LIE7 EnsemblPlants:AT3G22150.1
GeneID:821779 KEGG:ath:AT3G22150 GeneFarm:3869 TAIR:At3g22150
eggNOG:NOG291997 HOGENOM:HOG000241004 InParanoid:Q9LIE7 OMA:EVWNTMI
PhylomeDB:Q9LIE7 ProtClustDB:CLSN2685299 Genevestigator:Q9LIE7
Uniprot:Q9LIE7
Length = 820
Score = 127 (49.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 44/150 (29%), Positives = 64/150 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ---IEXX 57
MISGY+Q G + F K+ + + VT+ +L A S G+ L K+L I
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 58 XXXXXXXXXXX--RYAHSGRIRLARD---------PVSCKAMISGYSQAGRFNEALEPFG 106
Y+ +G I+ A D V+ MI GY Q G A+ F
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
++ G+ D +T V VL+A S G +D G
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEG 641
Score = 123 (48.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQI----EX 56
MIS + Q G +E L +++ G D +T+ +L+A+S + K+ +
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 57 XXXXXXXXXXXXRYAHSGRIRLA-----------RDPVSCKAMISGYSQAGRFNEALEPF 105
Y+ SG IR++ RD + +MISGY+Q G + F
Sbjct: 450 IQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVF 509
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFGKS------------NIFLTTAIIEMYAK 152
K+ + + VT+ +L A S G++D GK N+F+ +A+++MY+K
Sbjct: 510 RKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568
>TAIR|locus:2019130 [details] [associations]
symbol:OTP87 "organelle transcript processing 87"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0080156 "mitochondrial mRNA modification" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00548519 PIR:B96775
RefSeq:NP_177599.1 UniGene:At.34861 ProteinModelPortal:Q9CA56
SMR:Q9CA56 PRIDE:Q9CA56 EnsemblPlants:AT1G74600.1 GeneID:843800
KEGG:ath:AT1G74600 GeneFarm:3629 TAIR:At1g74600 eggNOG:NOG278390
HOGENOM:HOG000243138 InParanoid:Q9CA56 OMA:SYAQHGK PhylomeDB:Q9CA56
ProtClustDB:CLSN2682261 ArrayExpress:Q9CA56 Genevestigator:Q9CA56
GO:GO:0080156 Uniprot:Q9CA56
Length = 895
Score = 127 (49.8 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 43/142 (30%), Positives = 62/142 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA-SSGP----GAWILAKELQIE 55
MISG+++ G EA+ F ++ G DE T+ VLT SS P G I L+
Sbjct: 522 MISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG 581
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G ++LAR DPVSC ++ISGYSQ G + F
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 107 KLESLGVHTDEVTMVVVLAASS 128
+ G D + +L A++
Sbjct: 642 DMVMSGFTMDSFAISSILKAAA 663
Score = 103 (41.3 bits), Expect = 0.00020, P = 0.00020
Identities = 40/148 (27%), Positives = 65/148 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTAS-----SGPGAWILAKELQIE 55
+ISGYSQ G + F + G D + +L A+ S GA + A +I
Sbjct: 623 LISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIG 682
Query: 56 XXXXXXXXXXXXXRYAHSGRI-----RLAR----DPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G I ++ D ++ A+I+ Y+Q G+ NEAL+ +
Sbjct: 683 LCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALD 134
++ G D+VT V VL+A S G ++
Sbjct: 743 LMKEKGFKPDKVTFVGVLSACSHGGLVE 770
Score = 77 (32.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
+D +MISG+++ G EA+ F ++ G DE T+ VL S +L GK
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGK 571
Score = 75 (31.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS 41
MISGY Q F E+L F K+ LG +E++ V++A S
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACS 161
>TAIR|locus:2154855 [details] [associations]
symbol:AT5G66520 "AT5G66520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB013389 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00529723
RefSeq:NP_201453.1 UniGene:At.55714 ProteinModelPortal:Q9FJY7
SMR:Q9FJY7 EnsemblPlants:AT5G66520.1 GeneID:836784
KEGG:ath:AT5G66520 GeneFarm:3455 TAIR:At5g66520 eggNOG:NOG260190
InParanoid:Q9FJY7 OMA:PHNAYTF PhylomeDB:Q9FJY7
ProtClustDB:CLSN2686844 Genevestigator:Q9FJY7 Uniprot:Q9FJY7
Length = 620
Score = 125 (49.1 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 43/151 (28%), Positives = 69/151 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGA-----WILAKELQIE 55
MISGY QA EAL+ F ++++ V D V++ L+A + GA WI + +
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLARDP---VSCK------AMISGYSQAGRFNEALEPFG 106
YA G + A + + K A+ISGY+ G EA+ F
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFM 337
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
+++ +G+ + +T VL A S G ++ GK
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
>TAIR|locus:2025242 [details] [associations]
symbol:AT1G77010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 EMBL:AC002291 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 IPI:IPI00530062 PIR:B96799
RefSeq:NP_177827.1 UniGene:At.52541 ProteinModelPortal:O49287
SMR:O49287 PaxDb:O49287 PRIDE:O49287 EnsemblPlants:AT1G77010.1
GeneID:844037 KEGG:ath:AT1G77010 GeneFarm:3630 TAIR:At1g77010
eggNOG:NOG274540 HOGENOM:HOG000083580 InParanoid:O49287 OMA:NTMIEGY
PhylomeDB:O49287 ProtClustDB:CLSN2682961 Genevestigator:O49287
Uniprot:O49287
Length = 695
Score = 125 (49.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 41/151 (27%), Positives = 69/151 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGP-----GAWILAKELQIE 55
M +G+SQ G E LE F ++ L + TDEV++ V++A + G + A+ +
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVG 480
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
Y G + R D V +MISGY+ G+ EA++ F
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
K+ G+ ++T +VVL A + G ++ G+
Sbjct: 541 KMSVAGIRPTQITFMVVLTACNYCGLVEEGR 571
>TAIR|locus:2010012 [details] [associations]
symbol:AT1G13410 "AT1G13410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK226699 IPI:IPI00548139 RefSeq:NP_172798.2 UniGene:At.51594
ProteinModelPortal:Q0WVP2 SMR:Q0WVP2 STRING:Q0WVP2 PaxDb:Q0WVP2
PRIDE:Q0WVP2 EnsemblPlants:AT1G13410.1 GeneID:837901
KEGG:ath:AT1G13410 TAIR:At1g13410 eggNOG:NOG254840
InParanoid:Q0WVP2 OMA:KVAMRDT PhylomeDB:Q0WVP2
ProtClustDB:CLSN2920227 Genevestigator:Q0WVP2 Uniprot:Q0WVP2
Length = 474
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 44/152 (28%), Positives = 69/152 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLG-VHTDEVTMVVVLTASSGPGAWILAKELQIEXXXX 59
+I GY+Q GR +E L F ++ G V ++ TM +VL+A + GA+ K +
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL 217
Query: 60 XXXXXXXXXR------YAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEP 104
+ Y G I +A RD +S MI+G + G EAL
Sbjct: 218 GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNL 277
Query: 105 FGKLESLGVHTDEVTMVVVLAASSGPGALDFG 136
F ++++ G+ D+VT V VL A G ++ G
Sbjct: 278 FHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 100 (40.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLG-VHTDEVTMVVVLAASSGPGALDFGK 137
R+ S +I GY+Q GR +E L F ++ G V ++ TM +VL+A + GA DFGK
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Score = 40 (19.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 1 MISGYSQAGRFNEALEPFGKL 21
MISGY + G EA F ++
Sbjct: 96 MISGYIEMGNMLEARSLFDQM 116
>TAIR|locus:2154389 [details] [associations]
symbol:LPA66 "LOW PSII ACCUMULATION 66" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0007020
"microtubule nucleation" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB017061
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AY056318 IPI:IPI00541515
RefSeq:NP_199702.1 UniGene:At.26336 ProteinModelPortal:Q9FI80
SMR:Q9FI80 PaxDb:Q9FI80 PRIDE:Q9FI80 EnsemblPlants:AT5G48910.1
GeneID:834949 KEGG:ath:AT5G48910 GeneFarm:3360 TAIR:At5g48910
eggNOG:NOG255755 InParanoid:Q9FI80 OMA:LELWREM PhylomeDB:Q9FI80
ProtClustDB:CLSN2686787 Genevestigator:Q9FI80 Uniprot:Q9FI80
Length = 646
Score = 123 (48.4 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIEXXXXX 60
MISGYS G F +A+E F +++ + + VT+V VL A S G+ L + L +
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 61 XXX-----XXXXXRYAHSGRI--------RLARDPV-SCKAMISGYSQAGRFNEALEPFG 106
Y+ G I RL R+ V + AMI+G++ G+ +A++ F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
K+ GV +V + +L A S G ++ G+
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Score = 101 (40.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK-- 137
R VS MISGYS G F +A+E F +++ + + VT+V VL A S G+L+ G+
Sbjct: 237 RSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL 296
Query: 138 ------SNI----FLTTAIIEMYAK 152
S I L +A+I+MY+K
Sbjct: 297 HLYAEDSGIRIDDVLGSALIDMYSK 321
Score = 33 (16.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGV 26
MI GY + G A F K+ V
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSV 239
>TAIR|locus:2140235 [details] [associations]
symbol:AT4G02750 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161495 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC004044 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00548792 PIR:A85035
RefSeq:NP_192184.1 UniGene:At.50610 ProteinModelPortal:Q9SY02
SMR:Q9SY02 PRIDE:Q9SY02 EnsemblPlants:AT4G02750.1 GeneID:828187
KEGG:ath:AT4G02750 GeneFarm:3233 TAIR:At4g02750 eggNOG:NOG280862
InParanoid:Q9SY02 OMA:MYVLLSN PhylomeDB:Q9SY02
ProtClustDB:CLSN2685776 Genevestigator:Q9SY02 Uniprot:Q9SY02
Length = 781
Score = 124 (48.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 49/159 (30%), Positives = 71/159 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ---IEXX 57
MI+GYSQ+G EAL F ++E G + + L+ + A L K+L ++
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 58 XXXX--XXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNE-ALEPF 105
Y G I A +D VS MI+GYS+ G F E AL F
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG-FGEVALRFF 498
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIFLTT 144
++ G+ D+ TMV VL+A S G +D G+ + T
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/147 (31%), Positives = 63/147 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-QIEXXXX 59
M+SGY Q EA E F K+ +EV+ +L +AKEL +
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 60 XXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFGKLES 110
YA G+I A RDPVS AMI+GYSQ+G EAL F ++E
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 111 LGVHTDEVTMVVVLAASSGPGALDFGK 137
G + + L+ + AL+ GK
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGK 429
>TAIR|locus:2010652 [details] [associations]
symbol:AT1G04840 "AT1G04840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC004809 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518058 PIR:F86181 RefSeq:NP_171976.1
UniGene:At.51482 ProteinModelPortal:Q9MAT2 SMR:Q9MAT2
EnsemblPlants:AT1G04840.1 GeneID:839402 KEGG:ath:AT1G04840
GeneFarm:3457 TAIR:At1g04840 eggNOG:NOG254388 InParanoid:Q9MAT2
OMA:GDCHSLM PhylomeDB:Q9MAT2 ProtClustDB:CLSN2681950
Genevestigator:Q9MAT2 Uniprot:Q9MAT2
Length = 665
Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/155 (27%), Positives = 68/155 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS-----GPGAWILAKELQIE 55
+I+G+SQ G + A+ + ++ G+ +E T+ VL+A S G G I L
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG 323
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G + A +D +S AMI G++ GRF++A++ F
Sbjct: 324 IKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIF 141
++ G DEV + VL A +D G N F
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGL-NFF 417
Score = 91 (37.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG--- 136
++ VS +I+G+SQ G + A+ + ++ G+ +E T+ VL+A S GAL G
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Query: 137 ---------KSNIFLTTAIIEMYAK 152
K + + TA+++MYAK
Sbjct: 316 HGYILDNGIKLDRAIGTALVDMYAK 340
Score = 58 (25.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPG-AWI 47
+I G ++ RF ++ F + LGV D +T VL ++S G W+
Sbjct: 97 LIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWL 144
>TAIR|locus:4515103421 [details] [associations]
symbol:AT4G19191 "AT4G19191" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021687 EMBL:AL161550
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
eggNOG:NOG310150 Pfam:PF13041 IPI:IPI00529517 PIR:T04440
RefSeq:NP_001119013.1 UniGene:At.74330 ProteinModelPortal:P0C8Q2
SMR:P0C8Q2 PRIDE:P0C8Q2 EnsemblPlants:AT4G19191.1 GeneID:6240220
KEGG:ath:AT4G19191 TAIR:At4g19191 HOGENOM:HOG000115637 OMA:KRDVASW
PhylomeDB:P0C8Q2 ProtClustDB:CLSN2708526 Genevestigator:P0C8Q2
Uniprot:P0C8Q2
Length = 654
Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/151 (30%), Positives = 70/151 (46%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA-----SSGPGAWILAK-ELQI 54
MISGY++ G +EAL F + G D VT++ +++ S G WI A+ ++
Sbjct: 328 MISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG 387
Query: 55 EXXXXXXXXXXXXXRYAHSGRIRLARD-----P----VSCKAMISGYSQAGRFNEALEPF 105
Y+ G I ARD P V+ MI+GY+ G F EAL+ F
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFG 136
K+ L + +T + VL A + G+L+ G
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Score = 92 (37.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 IRLARDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDF 135
I +R VS MISGY++ G +EAL F + G D VT++ +++ G+L+
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 136 GK-------------SNIFLTTAIIEMYAK 152
GK N+ + A+I+MY+K
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSK 405
Score = 57 (25.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS 41
M+SG+ Q+G ++A F ++ + D VT++ ++ ++S
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>TAIR|locus:2100392 [details] [associations]
symbol:AT3G47840 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL049746 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00525955 PIR:T07723 RefSeq:NP_190368.1 UniGene:At.53826
ProteinModelPortal:Q9STS9 SMR:Q9STS9 PaxDb:Q9STS9 PRIDE:Q9STS9
EnsemblPlants:AT3G47840.1 GeneID:823940 KEGG:ath:AT3G47840
GeneFarm:3701 TAIR:At3g47840 eggNOG:NOG249488 InParanoid:Q9STS9
OMA:IKEPGWS PhylomeDB:Q9STS9 ProtClustDB:CLSN2684004
Genevestigator:Q9STS9 Uniprot:Q9STS9
Length = 706
Score = 121 (47.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/150 (28%), Positives = 62/150 (41%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGP-----GAWILAKELQIE 55
+I GY QAG E + F + G + + +L+ S G + A L
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA--------RDP-VSCKAMISGYSQAGRFNEALEPFG 106
Y+ G I+ A RD VS AMI+GY++ G+ EA++ F
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE 501
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
K +G D VT + VL A + G LD G
Sbjct: 502 KSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
>TAIR|locus:2159238 [details] [associations]
symbol:AT5G61800 "AT5G61800" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB010069 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00520201
RefSeq:NP_200988.1 UniGene:At.49205 ProteinModelPortal:Q9FLS9
SMR:Q9FLS9 EnsemblPlants:AT5G61800.1 GeneID:836302
KEGG:ath:AT5G61800 GeneFarm:4201 TAIR:At5g61800 eggNOG:NOG315848
InParanoid:Q9FLS9 OMA:VYSAMAG PhylomeDB:Q9FLS9
ProtClustDB:CLSN2686946 Genevestigator:Q9FLS9 Uniprot:Q9FLS9
Length = 499
Score = 119 (46.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/155 (27%), Positives = 67/155 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-----QIE 55
+ISGY+Q EA++ F ++ +LG+ D V +V L+A + G W K + +
Sbjct: 220 LISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKR 279
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLARDPVS-CK--------AMISGYSQAGRFNEALEPFG 106
YA G I A + C AMI+G + G ++ F
Sbjct: 280 LFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFR 339
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIF 141
K+ S G+ D VT + VL S G +D + N+F
Sbjct: 340 KMVSSGIKPDGVTFISVLVGCSHSGLVDEAR-NLF 373
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS- 138
RD VS ++ISGY+Q EA++ F ++ +LG+ D V +V L+A + G GK+
Sbjct: 212 RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI 271
Query: 139 -----------NIFLTTAIIEMYAK 152
+ FL T +++ YAK
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAK 296
>TAIR|locus:2054789 [details] [associations]
symbol:MEF21 "mitochondrial editing factor 21"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC007109 Pfam:PF13041 GO:GO:0080156 HOGENOM:HOG000237569
EMBL:DQ056537 IPI:IPI00521897 PIR:E84590 RefSeq:NP_179644.1
UniGene:At.50086 ProteinModelPortal:Q9SIL5 SMR:Q9SIL5
EnsemblPlants:AT2G20540.1 GeneID:816576 KEGG:ath:AT2G20540
GeneFarm:3690 TAIR:At2g20540 eggNOG:NOG269713 InParanoid:Q9SIL5
OMA:ICNALME PhylomeDB:Q9SIL5 ProtClustDB:CLSN2683323
Genevestigator:Q9SIL5 Uniprot:Q9SIL5
Length = 534
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAK--ELQIEXXX 58
MISGY+ G + EA++ F +++ G+ DE++++ VL + + G+ L K L E
Sbjct: 212 MISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRG 271
Query: 59 XXXXXX---XXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G I A +D +S MISGY+ G + A+E F
Sbjct: 272 FLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFN 331
Query: 107 KLESLGVHTDEVTMVVVLAASSGPG 131
+++ V + +T + +L+A S G
Sbjct: 332 EMQRAKVKPNGITFLGLLSACSHVG 356
Score = 105 (42.0 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 76 IRLARDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDF 135
+ L + VS AMISGY+ G + EA++ F +++ G+ DE++++ VL + + G+L+
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 136 GK 137
GK
Sbjct: 260 GK 261
>TAIR|locus:2150996 [details] [associations]
symbol:AT5G15300 "AT5G15300" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL353993 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX832059 IPI:IPI00547309
PIR:T49965 RefSeq:NP_197034.2 UniGene:At.66735
ProteinModelPortal:Q9LXF2 PRIDE:Q9LXF2 EnsemblPlants:AT5G15300.1
GeneID:831382 KEGG:ath:AT5G15300 GeneFarm:4219 TAIR:At5g15300
eggNOG:NOG243318 InParanoid:Q9LXF2 OMA:AVAWSAM
ProtClustDB:CLSN2681047 Genevestigator:Q9LXF2 Uniprot:Q9LXF2
Length = 548
Score = 100 (40.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS- 138
+D V+ AMISGY G EAL F ++ G H D VT++ +L+A + G L+ GK
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 139 NIF-LTTAII 147
+I+ L TA +
Sbjct: 298 HIYILETASV 307
Score = 52 (23.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLT 38
M SGY++ G+ +EA+ F ++ + D+V V++T
Sbjct: 184 MTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMIT 217
>TAIR|locus:2056794 [details] [associations]
symbol:REME1 "required for efficiency of mitochondrial
editing 1" species:3702 "Arabidopsis thaliana" [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
GO:GO:0009451 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AC007196 EMBL:BT003840 IPI:IPI00519155 PIR:C84453
RefSeq:NP_178481.1 UniGene:At.41363 ProteinModelPortal:Q9SI53
SMR:Q9SI53 PRIDE:Q9SI53 EnsemblPlants:AT2G03880.1 GeneID:814914
KEGG:ath:AT2G03880 GeneFarm:3431 TAIR:At2g03880 eggNOG:NOG254665
InParanoid:Q9SI53 OMA:FRSMKKL PhylomeDB:Q9SI53
ProtClustDB:CLSN2683857 Genevestigator:Q9SI53 Uniprot:Q9SI53
Length = 630
Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 41/148 (27%), Positives = 67/148 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQI---EXX 57
+I G++Q R + ALE F +++ G ++ T+ VL A +G L + + +
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 290
Query: 58 XXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFGKL 108
Y G + A RD ++ MISG +Q G EAL+ F ++
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 109 ESLGVHTDEVTMVVVLAASSGPGALDFG 136
+S G + +T+V VL A S G L+ G
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDG 378
>TAIR|locus:4010713776 [details] [associations]
symbol:AT3G26782 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB016889 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK228506 IPI:IPI00852362
RefSeq:NP_001078212.1 UniGene:At.71198 ProteinModelPortal:Q9LW32
SMR:Q9LW32 EnsemblPlants:AT3G26782.1 GeneID:5008030
KEGG:ath:AT3G26782 GeneFarm:3356 TAIR:At3g26782 eggNOG:NOG324646
OMA:TSIIDMY PhylomeDB:Q9LW32 ProtClustDB:CLSN2696675
Genevestigator:Q9LW32 Uniprot:Q9LW32
Length = 659
Score = 119 (46.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 47/146 (32%), Positives = 66/146 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHT-DEVTMVVVLTASSGPGAWILAK-----ELQI 54
++S Y+Q+G NEA E F +L V T + +T+ VL A S GA + K +++
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 55 EXXXXXXXXXXXXXRYAHSGRIRLAR---DPVSCK------AMISGYSQAGRFNEALEPF 105
Y GR+ AR D + K AMI+GY G +ALE F
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPG 131
+ GV + +T V VLAA S G
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAG 402
>TAIR|locus:2039817 [details] [associations]
symbol:AT2G39620 "AT2G39620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004218 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00546453 PIR:T00570 RefSeq:NP_181492.1 UniGene:At.66334
ProteinModelPortal:O80647 SMR:O80647 EnsemblPlants:AT2G39620.1
GeneID:818545 KEGG:ath:AT2G39620 GeneFarm:3675 TAIR:At2g39620
eggNOG:NOG285557 HOGENOM:HOG000115625 InParanoid:O80647 OMA:ATAVISM
PhylomeDB:O80647 ProtClustDB:CLSN2683357 Genevestigator:O80647
Uniprot:O80647
Length = 836
Score = 120 (47.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 48/178 (26%), Positives = 75/178 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWI--LAKE---LQIE 55
M++ Y+ G F E LE F + + V ++V L A++ G + +A +Q
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G + +A RD VS AMI+ Y QAG+ +EA+ F
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKS------------NIFLTTAIIEMYAK 152
+ + + + VT+ VL +G A GKS + TA+I MYAK
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAK 448
Score = 116 (45.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 39/138 (28%), Positives = 62/138 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-----QIE 55
MI+ Y QAG+ +EA+ F + + + + VT+ VL +G A L K + + +
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 56 XXXXXXXXXXXXXRYAHSGRI--------RLA-RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA GR RL +D V+ A+ GY+Q G N+A + +
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 107 KLESLGVHTDEVTMVVVL 124
++ GV D TMV +L
Sbjct: 492 NMKLHGVCPDSRTMVGML 509
>TAIR|locus:2007116 [details] [associations]
symbol:AT1G69350 "AT1G69350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC018364 EMBL:AC073178 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00543418
RefSeq:NP_564961.1 UniGene:At.52447 ProteinModelPortal:Q9C507
SMR:Q9C507 PaxDb:Q9C507 PRIDE:Q9C507 EnsemblPlants:AT1G69350.1
GeneID:843267 KEGG:ath:AT1G69350 GeneFarm:3625 TAIR:At1g69350
eggNOG:NOG266087 HOGENOM:HOG000115616 InParanoid:Q9C507 OMA:SSEHFAC
PhylomeDB:Q9C507 Genevestigator:Q9C507 Uniprot:Q9C507
Length = 787
Score = 119 (46.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 42/151 (27%), Positives = 64/151 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGA-----WILAKELQIE 55
M+ G+SQ G EA+ F + + +EVT + V+ A S G+ W+ K L I
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHK-LIIS 534
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G + A R VS +MI+ Y GR A+ F
Sbjct: 535 GLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFN 594
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
++ G +EV + VL+A G+++ GK
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVEEGK 625
Score = 108 (43.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 46/176 (26%), Positives = 76/176 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ---IEXX 57
+IS Y+ G +AL F ++ + + D T+ ++A G L K++ I
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD 435
Query: 58 XXXXXXXXXXX-RYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFGK 107
Y+ SG + A R V+ +M+ G+SQ G EA+ F
Sbjct: 436 VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDY 495
Query: 108 LESLGVHTDEVTMVVVLAASSGPGALDFGK-----------SNIFLTTAIIEMYAK 152
+ + +EVT + V+ A S G+L+ GK ++F TA+I+MYAK
Sbjct: 496 MYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAK 551
>TAIR|locus:2018092 [details] [associations]
symbol:MEF9 "AT1G62260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0016554 "cytidine to uridine
editing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC000375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546235 PIR:B96649 RefSeq:NP_176416.1
UniGene:At.66076 ProteinModelPortal:O04590 SMR:O04590 PaxDb:O04590
PRIDE:O04590 EnsemblPlants:AT1G62260.1 GeneID:842523
KEGG:ath:AT1G62260 GeneFarm:3623 TAIR:At1g62260 eggNOG:NOG295783
InParanoid:O04590 OMA:MPTHITF PhylomeDB:O04590
ProtClustDB:CLSN2682086 Genevestigator:O04590 Uniprot:O04590
Length = 656
Score = 118 (46.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 42/167 (25%), Positives = 76/167 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-QIEXXXX 59
+I+ Y + + EA++ F ++ G D T+ +L+AS+G L ++ QI
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV 439
Query: 60 XXXX---XXXXXRYAHSGRI----------RLARDPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G I +L R+ ++ AMI GY+ G +EAL FG
Sbjct: 440 IPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFG 499
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIFLTTAIIEMYAKM 153
++S G++ +T V VL A + G +D K+ ++ ++ +M
Sbjct: 500 SMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQM 546
>TAIR|locus:2125899 [details] [associations]
symbol:AT4G33170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161583 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035525 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00529412 PIR:T05197 RefSeq:NP_195043.1 UniGene:At.65446
ProteinModelPortal:Q9SMZ2 SMR:Q9SMZ2 PRIDE:Q9SMZ2
EnsemblPlants:AT4G33170.1 GeneID:829454 KEGG:ath:AT4G33170
GeneFarm:3439 TAIR:At4g33170 eggNOG:NOG285302 InParanoid:Q9SMZ2
OMA:SGILDMY PhylomeDB:Q9SMZ2 ProtClustDB:CLSN2685477
Genevestigator:Q9SMZ2 Uniprot:Q9SMZ2
Length = 990
Score = 120 (47.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/145 (29%), Positives = 64/145 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS-----GPGAWILAKELQIE 55
MISG + G A F ++ +GV DE T+ + ASS G I A L++
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 56 XXXXXXXXXXXXXRYAHSGRI--------RLARDPVSC-KAMISGYSQAGRFNEALEPFG 106
YA G I R+ ++ AM+ G +Q G E L+ F
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 107 KLESLGVHTDEVTMVVVLAASSGPG 131
+++SLG+ D+VT + VL+A S G
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSG 733
>TAIR|locus:2057574 [details] [associations]
symbol:AT2G33760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00521080 PIR:C84749 RefSeq:NP_180932.1 UniGene:At.66304
UniGene:At.68773 ProteinModelPortal:P93011 SMR:P93011
EnsemblPlants:AT2G33760.1 GeneID:817942 KEGG:ath:AT2G33760
GeneFarm:3149 TAIR:At2g33760 eggNOG:NOG259057 InParanoid:P93011
OMA:SPSNYTF PhylomeDB:P93011 ProtClustDB:CLSN2683510
Genevestigator:P93011 Uniprot:P93011
Length = 583
Score = 117 (46.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 41/153 (26%), Positives = 67/153 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGA-----WILAKELQIE 55
++SG+ Q G +EA++ F ++ G D T V +L+A + GA W+ +
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLARDP---------VSCKAMISGYSQAGRFNEALEPFG 106
Y+ G + AR+ + AMIS Y G +A+E F
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 107 KLES-LGVHTDEVTMVVVLAASSGPGALDFGKS 138
K+E G + VT V VL+A + G ++ G+S
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRS 331
>TAIR|locus:2019160 [details] [associations]
symbol:AT1G74630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK220733
EMBL:AK220737 IPI:IPI00540769 PIR:D96775 RefSeq:NP_177601.1
UniGene:At.34855 UniGene:At.70345 ProteinModelPortal:Q9CA54
SMR:Q9CA54 PRIDE:Q9CA54 EnsemblPlants:AT1G74630.1 GeneID:843802
KEGG:ath:AT1G74630 GeneFarm:3465 TAIR:At1g74630 eggNOG:NOG304289
HOGENOM:HOG000237569 InParanoid:Q9CA54 OMA:KVFDEMH PhylomeDB:Q9CA54
ProtClustDB:CLSN2682262 Genevestigator:Q9CA54 Uniprot:Q9CA54
Length = 643
Score = 117 (46.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ--IEXXX 58
MI G + G FNE+ F +L+ G+ +EV++ VL+A S G++ K L +E
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG 299
Query: 59 XX---XXXXXXXXRYAHSGRIRLARDP----------VSCKAMISGYSQAGRFNEALEPF 105
Y+ G + +AR VS +MI+G + G+ EA+ F
Sbjct: 300 YSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF 359
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
++ + GV D ++ + +L A S G ++ G+
Sbjct: 360 NEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
Score = 107 (42.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
RD VS MI G + G FNE+ F +L+ G+ +EV++ VL+A S G+ +FGK
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
>TAIR|locus:2045580 [details] [associations]
symbol:AT2G42920 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006580 EMBL:AC006931 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK229283
IPI:IPI00518122 PIR:H84859 RefSeq:NP_181820.1 UniGene:At.73075
ProteinModelPortal:Q9SJG6 SMR:Q9SJG6 PaxDb:Q9SJG6 PRIDE:Q9SJG6
EnsemblPlants:AT2G42920.1 GeneID:818893 KEGG:ath:AT2G42920
GeneFarm:3678 TAIR:At2g42920 eggNOG:NOG237883 InParanoid:Q9SJG6
OMA:NYAYLVF PhylomeDB:Q9SJG6 ProtClustDB:CLSN2683945
Genevestigator:Q9SJG6 Uniprot:Q9SJG6
Length = 559
Score = 116 (45.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 41/145 (28%), Positives = 63/145 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA-----SSGPGAWILAKELQIE 55
MISG+ + GRF +AL+ F +++ V D TMV +L A +S G WI ++
Sbjct: 229 MISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNR 288
Query: 56 XXXXXXXXXXXXXRYAHSGRIR--------LARDPVSC-KAMISGYSQAGRFNEALEPFG 106
Y G I + +SC +MI G + G A++ F
Sbjct: 289 FELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFS 348
Query: 107 KLESLGVHTDEVTMVVVLAASSGPG 131
+LE G+ D V+ + VL A + G
Sbjct: 349 ELERSGLEPDSVSFIGVLTACAHSG 373
Score = 102 (41.0 bits), Expect = 0.00014, P = 0.00014
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK-- 137
R+ VS +MISG+ + GRF +AL+ F +++ V D TMV +L A + GA + G+
Sbjct: 221 RNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWI 280
Query: 138 ----------SNIFLTTAIIEMYAK 152
N + TA+I+MY K
Sbjct: 281 HEYIVRNRFELNSIVVTALIDMYCK 305
>TAIR|locus:2126352 [details] [associations]
symbol:AT4G37380 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161591
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035601 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00520306 PIR:T04732 RefSeq:NP_195454.1 UniGene:At.65465
ProteinModelPortal:Q9SZT8 SMR:Q9SZT8 PaxDb:Q9SZT8 PRIDE:Q9SZT8
EnsemblPlants:AT4G37380.1 GeneID:829892 KEGG:ath:AT4G37380
GeneFarm:3434 TAIR:At4g37380 eggNOG:NOG309820 InParanoid:Q9SZT8
OMA:MITCYAK PhylomeDB:Q9SZT8 ProtClustDB:CLSN2685788
BioCyc:ARA:AT4G37830-MONOMER BioCyc:MetaCyc:AT4G37830-MONOMER
Genevestigator:Q9SZT8 Uniprot:Q9SZT8
Length = 632
Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 44/152 (28%), Positives = 68/152 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGV-HTDEVTMVVVLTASSGPGA-----WILAKELQI 54
MI GY+Q G N+AL F KL + G DE+T+V L+A S GA WI
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 55 EXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPF 105
Y+ G + A +D V+ AMI+GY+ G +AL F
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 106 GKLESL-GVHTDEVTMVVVLAASSGPGALDFG 136
+++ + G+ ++T + L A + G ++ G
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGV-HTDEVTMVVVLAASSGPGALDFGK- 137
RD VS MI GY+Q G N+AL F KL + G DE+T+V L+A S GAL+ G+
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 138 SNIFLTTAIIEMYAKM 153
++F+ ++ I + K+
Sbjct: 281 IHVFVKSSRIRLNVKV 296
>TAIR|locus:2131939 [details] [associations]
symbol:MEF29 "AT4G30700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0000963
"mitochondrial RNA processing" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161577 Pfam:PF01535
TIGRFAMs:TIGR00756 GO:GO:0000963 Pfam:PF13041 HOGENOM:HOG000237570
GO:GO:0080156 EMBL:AL109787 EMBL:BX828159 EMBL:AJ006042
IPI:IPI00535639 PIR:C85359 PIR:T52645 RefSeq:NP_194799.1
UniGene:At.65435 ProteinModelPortal:Q9SUH6 SMR:Q9SUH6 PaxDb:Q9SUH6
PRIDE:Q9SUH6 EnsemblPlants:AT4G30700.1 GeneID:829193
KEGG:ath:AT4G30700 GeneFarm:3164 TAIR:At4g30700 eggNOG:NOG256068
InParanoid:Q9SUH6 OMA:MVKVHSE PhylomeDB:Q9SUH6
ProtClustDB:CLSN2685640 Genevestigator:Q9SUH6 Uniprot:Q9SUH6
Length = 792
Score = 116 (45.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 48/164 (29%), Positives = 72/164 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAK---EL--QIE 55
MISGY+Q G +A+ F +++ + VT+ +L+A + GA L K +L +
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
YA G I AR + V+ MISGY G+ EAL F
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIFLTTAIIEMY 150
++ + G+ VT + VL A S G + G IF ++I Y
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEG-DEIF--NSMIHRY 551
Score = 107 (42.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 50/176 (28%), Positives = 74/176 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKE---LQIEXX 57
MI GY+ G +L F +L G T+V ++ S G I A L+
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS-GHLMLIYAIHGYCLKSNFL 351
Query: 58 XXXXXXXXXXXRYAHSGRIRLAR-----DPV----SCKAMISGYSQAGRFNEALEPFGKL 108
Y+ I AR P S AMISGY+Q G +A+ F ++
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 109 ESLGVHTDEVTMVVVLAASSGPGALDFGK------------SNIFLTTAIIEMYAK 152
+ + VT+ +L+A + GAL GK S+I+++TA+I MYAK
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAK 467
>TAIR|locus:2124137 [details] [associations]
symbol:DOT4 "DEFECTIVELY ORGANIZED TRIBUTARIES 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0010087 "phloem or xylem histogenesis"
evidence=IMP] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IMP] [GO:0010588 "cotyledon vascular tissue pattern
formation" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0010087 GO:GO:0048366
GO:GO:0010305 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL035526
GO:GO:0010588 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK221529
IPI:IPI00547122 PIR:T04867 RefSeq:NP_193610.1 UniGene:At.54400
ProteinModelPortal:Q9SN39 SMR:Q9SN39 PaxDb:Q9SN39 PRIDE:Q9SN39
EnsemblPlants:AT4G18750.1 GeneID:827609 KEGG:ath:AT4G18750
GeneFarm:3432 TAIR:At4g18750 eggNOG:NOG288811 InParanoid:Q9SN39
OMA:EGWRFFN PhylomeDB:Q9SN39 ProtClustDB:CLSN2685451
Genevestigator:Q9SN39 Uniprot:Q9SN39
Length = 871
Score = 116 (45.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 45/151 (29%), Positives = 64/151 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKL-ESLGVHTDEVTMVVVLTASSGPGAWILAKEL-----QI 54
+I GYS+ NEAL F L E DE T+ VL A + A+ +E+ +
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 55 EXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPF 105
YA G + LA +D VS MI+GY G EA+ F
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFG 136
++ G+ DE++ V +L A S G +D G
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
>TAIR|locus:2097365 [details] [associations]
symbol:AT3G49710 "AT3G49710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533707 PIR:T46037 RefSeq:NP_190540.1
UniGene:At.22445 UniGene:At.53859 ProteinModelPortal:Q9M2Y7
SMR:Q9M2Y7 EnsemblPlants:AT3G49710.1 GeneID:824133
KEGG:ath:AT3G49710 GeneFarm:3525 TAIR:At3g49710 eggNOG:NOG274207
InParanoid:Q9M2Y7 OMA:DDCSFVC PhylomeDB:Q9M2Y7
ProtClustDB:CLSN2684258 Genevestigator:Q9M2Y7 Uniprot:Q9M2Y7
Length = 721
Score = 115 (45.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 48/170 (28%), Positives = 77/170 (45%)
Query: 1 MISGYSQAGRFNE-ALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKE---LQIEX 56
MISGYS +E A++ F +++ +G D+ + V V +A S + K+ L I+
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374
Query: 57 ---XXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEP 104
Y SG ++ AR + VS MI GY+Q G EAL
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 105 FGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS--NIFLTTAIIEMYAK 152
+ ++ G+ +++T V VL+A + G +D G+ N T IE A+
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAE 484
>TAIR|locus:2096414 [details] [associations]
symbol:AT3G03580 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC009327 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BT004278 EMBL:BT006153 IPI:IPI00535817 RefSeq:NP_187008.1
UniGene:At.40958 ProteinModelPortal:Q9SS60 SMR:Q9SS60 PaxDb:Q9SS60
PRIDE:Q9SS60 EnsemblPlants:AT3G03580.1 GeneID:821229
KEGG:ath:AT3G03580 GeneFarm:3232 TAIR:At3g03580 eggNOG:NOG261100
InParanoid:Q9SS60 OMA:YTFPSVI PhylomeDB:Q9SS60
ProtClustDB:CLSN2684094 Genevestigator:Q9SS60 Uniprot:Q9SS60
Length = 882
Score = 116 (45.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 51/178 (28%), Positives = 76/178 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSG-----PGAWILAKELQIE 55
+I +S+ G F EALE +GKL V D+ T V+ A +G G + + L +
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
Y+ G + AR D VS ++ISGYS G + EALE +
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 107 KLESLGVHTDEVTMVVVLAA-------SSGPG----ALDFG-KSNIFLTTAIIEMYAK 152
+L++ + D T+ VL A G G AL G S + + ++ MY K
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Score = 90 (36.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 72 HSGRI--RLAR-DPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASS 128
+S R+ R++R D V+ MI Y G +ALE F +E G+ D V + ++ A S
Sbjct: 562 NSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
Query: 129 GPGALDFG 136
G +D G
Sbjct: 622 HSGLVDEG 629
Score = 60 (26.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS 41
+ISGY Q+G EA++ F + + D +T +++++ S+
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
>TAIR|locus:2078653 [details] [associations]
symbol:AT3G02010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011664 EMBL:AC010797
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00527957 RefSeq:NP_186850.1 UniGene:At.53156
ProteinModelPortal:Q9S7F4 SMR:Q9S7F4 PRIDE:Q9S7F4
EnsemblPlants:AT3G02010.1 GeneID:821085 KEGG:ath:AT3G02010
GeneFarm:3358 TAIR:At3g02010 eggNOG:NOG280481 InParanoid:Q9S7F4
OMA:PAYSWVE PhylomeDB:Q9S7F4 ProtClustDB:CLSN2685183
Genevestigator:Q9S7F4 Uniprot:Q9S7F4
Length = 825
Score = 115 (45.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 43/150 (28%), Positives = 65/150 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ---IEXX 57
+ISGY Q G L+ F K+ + D+ T VL AS+ + +L K+L I
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 58 XXXXXXXXXXX--RYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G I+ A R+ VS A+IS ++ G A+ F
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
K+ G+ D V+++ VL A S G ++ G
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQG 572
>TAIR|locus:2118964 [details] [associations]
symbol:EMB2758 "embryo defective 2758" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL031032 EMBL:AL161584 Pfam:PF01535 TIGRFAMs:TIGR00756
HOGENOM:HOG000237570 IPI:IPI00530295 PIR:T05227 RefSeq:NP_567948.1
UniGene:At.65452 ProteinModelPortal:O81767 SMR:O81767 PaxDb:O81767
PRIDE:O81767 EnsemblPlants:AT4G33990.1 GeneID:829546
KEGG:ath:AT4G33990 GeneFarm:3205 TAIR:At4g33990 eggNOG:NOG269748
InParanoid:O81767 OMA:GWSSMEV PhylomeDB:O81767
ProtClustDB:CLSN2917663 Genevestigator:O81767 Uniprot:O81767
Length = 823
Score = 103 (41.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 52/176 (29%), Positives = 75/176 (42%)
Query: 1 MISGYSQAGRFNEALEPFGK-LESLGVHTDEVTMVVVL----TASSGPGAWILAKELQIE 55
MISGY +AG +E + F + S G+ D T VL T G LA +
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFM 182
Query: 56 -XXXXXXXXXXXXXRYAHSGRIRLARD--PV----SCKAMISGYSQAGRFNEALEPFGKL 108
RY G R+ D PV S AMISGY Q+G EAL L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 109 ESLGVHTDEVTMVVVLAASSGPGALDFG------------KSNIFLTTAIIEMYAK 152
++ D VT+V +L+A + G + G +S +F++ +I++YA+
Sbjct: 243 RAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Score = 34 (17.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 139 NIFLTTAIIEMYAKM 153
+I + A++ MYAK+
Sbjct: 383 DITIGNAVVVMYAKL 397
>TAIR|locus:2080727 [details] [associations]
symbol:MEF10 "mitochondrial RNA editing factor 10"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008153 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00530970
RefSeq:NP_187753.1 UniGene:At.53270 ProteinModelPortal:Q9CAY1
SMR:Q9CAY1 PaxDb:Q9CAY1 PRIDE:Q9CAY1 EnsemblPlants:AT3G11460.1
GeneID:820319 KEGG:ath:AT3G11460 GeneFarm:3438 TAIR:At3g11460
eggNOG:NOG330951 InParanoid:Q9CAY1 OMA:GLITWNA PhylomeDB:Q9CAY1
ProtClustDB:CLSN2684416 Genevestigator:Q9CAY1 Uniprot:Q9CAY1
Length = 623
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/150 (31%), Positives = 65/150 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ--IEXXX 58
+ISGYSQ G + LE + +++S GV D T+V VL++ + GA + E+ +E
Sbjct: 228 VISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287
Query: 59 XX---XXXXXXXXRYAHSGRIRLAR---D--PV----SCKAMISGYSQAGRFNEALEPFG 106
YA G + AR D PV S AMI Y G L F
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFD 347
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
+ G+ D V+VL+A S G D G
Sbjct: 348 DMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/150 (27%), Positives = 66/150 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIE----- 55
+ISGY+ + +A F +++ GV D VTM+ ++ + P L + L +
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---DPVSCK------AMISGYSQAGRFNEALEPFG 106
Y G + R D + K A+ISGYSQ G + LE +
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
+++S GV D T+V VL++ + GA G
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
>TAIR|locus:2055919 [details] [associations]
symbol:AT2G22070 "AT2G22070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR019734 Pfam:PF13176
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AC007232 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00546911
PIR:F84608 RefSeq:NP_179798.1 UniGene:At.39486
ProteinModelPortal:Q9SHZ8 SMR:Q9SHZ8 EnsemblPlants:AT2G22070.1
GeneID:816742 KEGG:ath:AT2G22070 GeneFarm:3362 TAIR:At2g22070
eggNOG:NOG294209 InParanoid:Q9SHZ8 OMA:SHYACMV PhylomeDB:Q9SHZ8
ProtClustDB:CLSN2683727 Genevestigator:Q9SHZ8 Uniprot:Q9SHZ8
Length = 786
Score = 112 (44.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 42/152 (27%), Positives = 62/152 (40%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLT-----ASSGPGAWILAKELQIE 55
MI GY Q G + EA+ F + G + T+ +L+ AS G I ++
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 56 XXXXXXXXXXXXXRYAHSGRI----------RLARDPVSCKAMISGYSQAGRFNEALEPF 105
YA +G I R RD VS +MI +Q G EALE F
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
+ G+ D +T V V +A + G ++ G+
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Score = 90 (36.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS- 138
RD V+ AMI GY Q G + EA+ F + G + T+ +L+ +S +L GK
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 139 -----------NIFLTTAIIEMYAK 152
++ ++ A+I MYAK
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAK 460
Score = 59 (25.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 1 MISGYSQAGRFNEALEPFGKL--ESLGVHTDEVTMVVVLTASSGPGAWILAKEL 52
MISG++Q G AL+ F K+ +SL + D T+ VL+A + + K++
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLCIGKQI 301
>TAIR|locus:2196583 [details] [associations]
symbol:ECB2 "EARLY CHLOROPLAST BIOGENESIS2" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0040007 GO:GO:0009507 GO:GO:0009658
EMBL:AC013453 GO:GO:0009416 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00522462 PIR:H86288
RefSeq:NP_173004.1 UniGene:At.41931 ProteinModelPortal:Q9M9E2
SMR:Q9M9E2 PRIDE:Q9M9E2 EnsemblPlants:AT1G15510.1 GeneID:838121
KEGG:ath:AT1G15510 GeneFarm:3519 TAIR:At1g15510 eggNOG:NOG295763
InParanoid:Q9M9E2 OMA:FCGHSER PhylomeDB:Q9M9E2 ProtClustDB:PLN03077
ArrayExpress:Q9M9E2 Genevestigator:Q9M9E2 Uniprot:Q9M9E2
Length = 866
Score = 112 (44.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIEXXXXX 60
MISGY + G +E LE F + L V D +T+ V++A G L +++
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 61 XXXXXX-----XXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y ++G R A +D VS MISGY ++A++ +
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
++ V DE+T+ VL+A + G LD G
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTG 417
>TAIR|locus:2012517 [details] [associations]
symbol:AT1G14470 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC012188 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00529823 PIR:E86279 RefSeq:NP_172899.1 UniGene:At.51608
ProteinModelPortal:Q9M9R6 SMR:Q9M9R6 EnsemblPlants:AT1G14470.1
GeneID:838009 KEGG:ath:AT1G14470 GeneFarm:4286 TAIR:At1g14470
eggNOG:NOG297619 InParanoid:Q9M9R6 OMA:KHESVES PhylomeDB:Q9M9R6
ProtClustDB:CLSN2682948 Genevestigator:Q9M9R6 Uniprot:Q9M9R6
Length = 540
Score = 83 (34.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS 41
M+SGY+Q G +AL F + LGV +E T V+V++A S
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Score = 75 (31.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLG-VHTDEVTMVVVLAASSGPGALDFG 136
R+ VS ++I+GY+ G+ A+E F + G DEVTM+ VL+A L+ G
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
>TAIR|locus:2095289 [details] [associations]
symbol:AT3G09040 "AT3G09040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009326
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00542229
RefSeq:NP_187516.1 UniGene:At.40178 ProteinModelPortal:Q9SS83
SMR:Q9SS83 PRIDE:Q9SS83 EnsemblPlants:AT3G09040.1 GeneID:820057
KEGG:ath:AT3G09040 GeneFarm:3706 TAIR:At3g09040 eggNOG:NOG256475
InParanoid:Q9SS83 OMA:CRIHGDD PhylomeDB:Q9SS83
ProtClustDB:CLSN2684968 Genevestigator:Q9SS83 Uniprot:Q9SS83
Length = 1028
Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 43/156 (27%), Positives = 68/156 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS-----GPGAWILAKELQIE 55
M+SG+SQ G + EAL+ + ++ GV D+ T V VL S G I + +
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 56 XXXXXXXXXXXXXRYAHSG----------RIRLARDPVSCKAMISGYSQAGRFNEALEPF 105
YA G +R + VS ++I+GY++ G +AL+ F
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 106 GKLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIF 141
+ + DE+T + VL A S G + G+ IF
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRK-IF 857
>TAIR|locus:2027554 [details] [associations]
symbol:AT1G56690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004154
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 PROSITE:PS51375 SUPFAM:SSF52954 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC009323 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00523592 PIR:G96608 RefSeq:NP_176062.1 UniGene:At.66043
ProteinModelPortal:Q9FXB9 PaxDb:Q9FXB9 PRIDE:Q9FXB9
EnsemblPlants:AT1G56690.1 GeneID:842125 KEGG:ath:AT1G56690
GeneFarm:3461 TAIR:At1g56690 eggNOG:NOG302853 InParanoid:Q9FXB9
OMA:TNMIGGL PhylomeDB:Q9FXB9 ProtClustDB:CLSN2912806
Genevestigator:Q9FXB9 Uniprot:Q9FXB9
Length = 704
Score = 109 (43.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLT-----ASSGPGAWILAKELQIE 55
MI Y + G EAL+ F +++ GV +++ +L+ AS G + A ++ +
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 56 XXXXXXXXXXXXXRYAHSGRI---RLARDPVSCK------AMISGYSQAGRFNEALEPFG 106
Y G + +L D S K ++ISGY+ G EAL+ F
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
++ S G ++VT++ +L A S G L+ G
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
>TAIR|locus:4010713895 [details] [associations]
symbol:AT4G21065 "AT4G21065" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX826462 EMBL:BX827021
IPI:IPI00846696 IPI:IPI00921709 PIR:A85240 PIR:T10649
RefSeq:NP_001078414.1 RefSeq:NP_001078415.1 UniGene:At.49734
ProteinModelPortal:A8MQA3 SMR:A8MQA3 PRIDE:A8MQA3
EnsemblPlants:AT4G21065.1 GeneID:5008150 KEGG:ath:AT4G21065
GeneFarm:3325 TAIR:At4g21065 eggNOG:NOG242330 OMA:PDTHTYP
PhylomeDB:A8MQA3 ProtClustDB:CLSN2699103 Genevestigator:A8MQA3
Uniprot:A8MQA3
Length = 595
Score = 108 (43.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 42/151 (27%), Positives = 70/151 (46%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIEXXXXX 60
+I+G+++ G+ EAL + ++ S G+ D T+V +L+A + GA L K + +
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 61 XXXXXXXXR-----YAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
YA GR+ A+ + VS ++I G + G EA+E F
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Query: 107 KLESL-GVHTDEVTMVVVLAASSGPGALDFG 136
+ES G+ E+T V +L A S G + G
Sbjct: 313 YMESTEGLLPCEITFVGILYACSHCGMVKEG 343
>TAIR|locus:2198678 [details] [associations]
symbol:PDE247 "pigment defective 247" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC009999 Pfam:PF01535
TIGRFAMs:TIGR00756 GO:GO:0009451 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:AK221614 IPI:IPI00538485 PIR:H86191
RefSeq:NP_172066.3 UniGene:At.11883 UniGene:At.49857
ProteinModelPortal:Q9MA50 SMR:Q9MA50 STRING:Q9MA50
EnsemblPlants:AT1G05750.1 GeneID:837083 KEGG:ath:AT1G05750
GeneFarm:3607 TAIR:At1g05750 eggNOG:NOG296548 InParanoid:Q9MA50
OMA:FKPDAVT PhylomeDB:Q9MA50 ProtClustDB:CLSN2693257
Genevestigator:Q9MA50 Uniprot:Q9MA50
Length = 500
Score = 107 (42.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 40/150 (26%), Positives = 62/150 (41%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGA-----WILAKELQIE 55
MI+G+ + G EAL F +++ GV D V ++ L A + GA W+ L +
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD 236
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLARDP---------VSCKAMISGYSQAGRFNEALEPFG 106
Y G + AR VS ++I G++ G +E+L F
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFR 296
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
K++ G D VT L A S G ++ G
Sbjct: 297 KMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Score = 97 (39.2 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG--- 136
RD +S AMI+G+ + G EAL F +++ GV D V ++ L A + GAL FG
Sbjct: 169 RDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWV 228
Query: 137 ---------KSNIFLTTAIIEMYAK 152
K+N+ ++ ++I++Y +
Sbjct: 229 HRYVLSQDFKNNVRVSNSLIDLYCR 253
Score = 44 (20.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 1 MISGYSQAGRFNEALEPFGKL 21
MI GY ++G+ + A + F K+
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKM 166
Score = 38 (18.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 1 MISGYSQAGRFNEALEPFGKLE 22
+I YS+ GRF +A F +E
Sbjct: 115 IIGMYSKRGRFKKARLVFDYME 136
>TAIR|locus:2121055 [details] [associations]
symbol:AT4G38010 "AT4G38010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 PROSITE:PS51375
EMBL:AL035538 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00533264 PIR:T05628
RefSeq:NP_195514.1 UniGene:At.65469 ProteinModelPortal:Q9SZK1
SMR:Q9SZK1 PRIDE:Q9SZK1 EnsemblPlants:AT4G38010.1 GeneID:829957
KEGG:ath:AT4G38010 GeneFarm:4024 TAIR:At4g38010 eggNOG:NOG236748
InParanoid:Q9SZK1 OMA:DYGRWVH PhylomeDB:Q9SZK1
ProtClustDB:CLSN2685374 Genevestigator:Q9SZK1 Uniprot:Q9SZK1
Length = 559
Score = 107 (42.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ------- 53
+I+G+++ G + EAL+ F K++ V + T V VL +S G L K +
Sbjct: 178 IITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 54 ----IEXXXXXXXXXXXXXRYAHSGRI--RLAR-DPVSCKAMISGYSQAGRFNEALEPFG 106
+E + + + R+ L + D VS +MISG R EA++ F
Sbjct: 235 SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFS 294
Query: 107 KLE-SLGVHTDEVTMVVVLAASSGPGALDFGK-SNIFLTTAIIE 148
++ S G+ D + VL+A + GA+D G+ + ++ TA I+
Sbjct: 295 LMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
>TAIR|locus:2198546 [details] [associations]
symbol:AT1G20230 "AT1G20230" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022472 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00518181 PIR:A86336 RefSeq:NP_173449.1 UniGene:At.41719
ProteinModelPortal:Q9LNU6 SMR:Q9LNU6 PRIDE:Q9LNU6
EnsemblPlants:AT1G20230.1 GeneID:838612 KEGG:ath:AT1G20230
GeneFarm:3206 TAIR:At1g20230 eggNOG:NOG298463 InParanoid:Q9LNU6
OMA:CHAVIKF PhylomeDB:Q9LNU6 ProtClustDB:CLSN2682959
Genevestigator:Q9LNU6 Uniprot:Q9LNU6
Length = 760
Score = 90 (36.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 83 VSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS---- 138
VS ++I+G +Q G+ EALE F +++ GV + VT+ +L A AL G+S
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 139 --------NIFLTTAIIEMYAK 152
N+ + +A+I+MYAK
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAK 435
Score = 65 (27.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVL 37
++SG++++G EA+ F K+ LG D+VT+ VL
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL 259
>TAIR|locus:2095487 [details] [associations]
symbol:AT3G28660 "AT3G28660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AP000420 EMBL:AY091065 EMBL:BT000982 IPI:IPI00548848
RefSeq:NP_189507.2 UniGene:At.42756 ProteinModelPortal:Q9LJI9
SMR:Q9LJI9 EnsemblPlants:AT3G28660.1 GeneID:822496
KEGG:ath:AT3G28660 GeneFarm:3695 TAIR:At3g28660 eggNOG:NOG252175
InParanoid:Q9LJI9 PhylomeDB:Q9LJI9 ProtClustDB:CLSN2685236
Genevestigator:Q9LJI9 Uniprot:Q9LJI9
Length = 504
Score = 106 (42.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 44/156 (28%), Positives = 70/156 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGA-----WI---LAKEL 52
+++GY + G +E LE F ++ G+ DE ++ LTA + GA WI + K+
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 53 QIEXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALE 103
IE YA G I A R+ S A+I GY+ G +A
Sbjct: 249 WIESDVFVGTALVDM--YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATT 306
Query: 104 PFGKLESL-GVHTDEVTMVVVLAASSGPGALDFGKS 138
++E G+ D V ++ VLAA + G L+ G++
Sbjct: 307 CLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRT 342
>TAIR|locus:2124603 [details] [associations]
symbol:AT4G18520 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR PROSITE:PS51375 EMBL:AL161548
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL021710 EMBL:AK229394
IPI:IPI00785911 PIR:T04548 RefSeq:NP_193587.4 UniGene:At.32894
ProteinModelPortal:Q0WNP3 SMR:Q0WNP3 EnsemblPlants:AT4G18520.1
GeneID:827584 KEGG:ath:AT4G18520 GeneFarm:4288 TAIR:At4g18520
eggNOG:NOG297314 HOGENOM:HOG000077484 InParanoid:Q0WNP3 OMA:STLVWFY
PhylomeDB:Q0WNP3 ProtClustDB:CLSN2694120 Genevestigator:Q0WNP3
Uniprot:Q0WNP3
Length = 617
Score = 107 (42.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 49/178 (27%), Positives = 76/178 (42%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIEXXXXX 60
+I+ +++ G EA+ F ++ + + +T+V +L A GA +L KEL +
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 61 XXXXXXXXR-----YAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y G R A RD VS AMISG S G +EAL+
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKS------------NIFLTTAIIEMYAK 152
++ GV + T L A + +L G+S N+F+ +A+I MYAK
Sbjct: 476 EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAK 533
>TAIR|locus:2167593 [details] [associations]
symbol:AT5G44230 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005239 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:DQ447037
IPI:IPI00540587 RefSeq:NP_199236.1 UniGene:At.55349
ProteinModelPortal:Q9FFG8 SMR:Q9FFG8 EnsemblPlants:AT5G44230.1
GeneID:834446 KEGG:ath:AT5G44230 GeneFarm:3182 TAIR:At5g44230
eggNOG:NOG302114 InParanoid:Q9FFG8 OMA:VISWTEL PhylomeDB:Q9FFG8
ProtClustDB:CLSN2687233 Genevestigator:Q9FFG8 Uniprot:Q9FFG8
Length = 657
Score = 98 (39.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFG--- 136
+D V+ AM++G++Q + EALE F ++E G+ DEVT+ ++A + GA +
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 137 -----KS------NIFLTTAIIEMYAK 152
KS ++ + +A+I+MY+K
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSK 330
Score = 47 (21.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA 39
+I GY+ G+F+EA+ +G + + T +L A
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKA 158
>TAIR|locus:2094812 [details] [associations]
symbol:AT3G29230 "AT3G29230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AB026657
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00545218
RefSeq:NP_189568.1 UniGene:At.65178 ProteinModelPortal:Q9LS72
SMR:Q9LS72 PaxDb:Q9LS72 PRIDE:Q9LS72 EnsemblPlants:AT3G29230.1
GeneID:822578 KEGG:ath:AT3G29230 GeneFarm:3696 TAIR:At3g29230
eggNOG:NOG247239 InParanoid:Q9LS72 OMA:NTILDGY PhylomeDB:Q9LS72
ProtClustDB:CLSN2684108 Genevestigator:Q9LS72 Uniprot:Q9LS72
Length = 600
Score = 106 (42.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 35/150 (23%), Positives = 62/150 (41%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-----QIE 55
+I+GY++ G EA ++ + G+ D ++ +L A + G L + +
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSN 345
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G ++ A +D VS M+ G G EA+E F
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
++ G+ D+VT + VL + + G +D G
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
>TAIR|locus:2056740 [details] [associations]
symbol:OTP85 "ORGANELLE TRANSCRIPT PROCESSING 85"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0016556 "mRNA
modification" evidence=RCA] InterPro:IPR011990 EMBL:AC004138
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0031425 HOGENOM:HOG000237569
EMBL:AF517844 IPI:IPI00532421 PIR:H84442 RefSeq:NP_178398.1
UniGene:At.41442 ProteinModelPortal:Q8LK93 SMR:Q8LK93 PaxDb:Q8LK93
PRIDE:Q8LK93 EnsemblPlants:AT2G02980.1 GeneID:814827
KEGG:ath:AT2G02980 GeneFarm:3321 TAIR:At2g02980 eggNOG:NOG294028
InParanoid:O80613 OMA:PTLINMY PhylomeDB:Q8LK93
ProtClustDB:CLSN2683708 Genevestigator:Q8LK93 Uniprot:Q8LK93
Length = 603
Score = 106 (42.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/151 (25%), Positives = 70/151 (46%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASS--GP---GAWILAKELQIE 55
MI+GY++ R NEAL F +++ + +E+T++ VL++ + G G WI +
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
+A G + A +D + AMI Y+ G+ +++ F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
++ S V DE+T + +L A S G ++ G+
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGR 351
Score = 101 (40.6 bits), Expect = 0.00061, P = 0.00061
Identities = 30/89 (33%), Positives = 51/89 (57%)
Query: 77 RLARDPVSC-KAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDF 135
R+ V C AMI+GY++ R NEAL F +++ + +E+T++ VL++ + G+LD
Sbjct: 189 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL 248
Query: 136 GK-------SNIF-----LTTAIIEMYAK 152
GK + F + TA+I+M+AK
Sbjct: 249 GKWIHKYAKKHSFCKYVKVNTALIDMFAK 277
>TAIR|locus:2202074 [details] [associations]
symbol:CRR22 "CHLORORESPIRATORY REDUCTION22" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016556
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0004519 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC007259 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00534837 RefSeq:NP_172596.1 UniGene:At.65900
ProteinModelPortal:Q3E6Q1 SMR:Q3E6Q1 STRING:Q3E6Q1 PaxDb:Q3E6Q1
PRIDE:Q3E6Q1 EnsemblPlants:AT1G11290.1 GeneID:837671
KEGG:ath:AT1G11290 GeneFarm:3466 TAIR:At1g11290 eggNOG:NOG272527
InParanoid:Q3E6Q1 OMA:HVITWNA PhylomeDB:Q3E6Q1
ProtClustDB:CLSN2681952 Genevestigator:Q3E6Q1 Uniprot:Q3E6Q1
Length = 809
Score = 107 (42.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 44/150 (29%), Positives = 66/150 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSG-----PGAWILAKELQIE 55
MI G++Q GR +AL F ++ S V D T V V+TA + WI ++
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---DPVSCK------AMISGYSQAGRFNEALEPFG 106
YA G I +AR D +S + AMI GY G ALE F
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 528
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
+++ + + VT + V++A S G ++ G
Sbjct: 529 EMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 98 (39.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 74 GRIRLARDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGAL 133
G+++ +R VS AMI G++Q GR +AL F ++ S V D T V V+ A +
Sbjct: 396 GKLQ-SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 134 DFGK------------SNIFLTTAIIEMYAK 152
K N+F+TTA+++MYAK
Sbjct: 455 HHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Score = 39 (18.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1 MISGYSQAGRFNEALEPFGKLES 23
+IS Y + + A FGKL+S
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQS 400
>TAIR|locus:2122634 [details] [associations]
symbol:OTP70 "AT4G25270" species:3702 "Arabidopsis
thaliana" [GO:0008380 "RNA splicing" evidence=IMP] [GO:0009451 "RNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380
EMBL:AL161563 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035396 Pfam:PF13041 IPI:IPI00521833
PIR:T05548 RefSeq:NP_194257.1 UniGene:At.32276
ProteinModelPortal:Q9SB36 SMR:Q9SB36 EnsemblPlants:AT4G25270.1
GeneID:828630 KEGG:ath:AT4G25270 GeneFarm:4021 TAIR:At4g25270
eggNOG:NOG269307 HOGENOM:HOG000006216 InParanoid:Q9SB36 OMA:EHNFELL
PhylomeDB:Q9SB36 ProtClustDB:CLSN2685667 Genevestigator:Q9SB36
Uniprot:Q9SB36
Length = 527
Score = 104 (41.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIEXXXXX 60
+ISGY++ G++ +A+ + ++ GV D T VL A G G+ + + + +
Sbjct: 166 LISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG 225
Query: 61 XXXXXXXXR-----YAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
YA G I AR D VS +M++GY G +EAL+ F
Sbjct: 226 FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFR 285
Query: 107 KLESLGVHTDEVTMVVVLA 125
+ G+ D+V + VLA
Sbjct: 286 LMVQNGIEPDKVAISSVLA 304
>TAIR|locus:2061310 [details] [associations]
symbol:GUN1 "AT2G31400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0031930 "mitochondria-nucleus
signaling pathway" evidence=IMP] [GO:0010019 "chloroplast-nucleus
signaling pathway" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 INTERPRO:IPR002625 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0031930
Gene3D:1.25.40.10 EMBL:AC007169 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 SMART:SM00463 PROSITE:PS50828
GO:GO:0010019 Pfam:PF13041 EMBL:BX819946 IPI:IPI00538422 PIR:C84720
RefSeq:NP_180698.1 UniGene:At.20815 ProteinModelPortal:Q9SIC9
SMR:Q9SIC9 EnsemblPlants:AT2G31400.1 GeneID:817698
KEGG:ath:AT2G31400 GeneFarm:4937 TAIR:At2g31400 eggNOG:NOG313285
HOGENOM:HOG000030408 InParanoid:Q9SIC9 OMA:FEDASML PhylomeDB:Q9SIC9
ProtClustDB:CLSN2683142 Genevestigator:Q9SIC9 Uniprot:Q9SIC9
Length = 918
Score = 93 (37.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 77 RLARDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLA 125
R+ + VS +I G+++AGRF+EAL FG++ LG+ D V+ +L+
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Score = 84 (34.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLT 38
+I G+++AGRF+EAL FG++ LG+ D V+ +L+
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Score = 69 (29.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 88 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAA 126
+I GYS+ G + EA+E F + +S G+ D V ++ A
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Score = 58 (25.5 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPG 44
+IS Y ++G EA+ F ++ G+ + VT V+ A G G
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC-GKG 316
>TAIR|locus:2159602 [details] [associations]
symbol:AT5G08510 "AT5G08510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006697 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:BT015162 EMBL:AK226649 IPI:IPI00536311
RefSeq:NP_196468.1 UniGene:At.24658 ProteinModelPortal:Q9FNN7
SMR:Q9FNN7 PRIDE:Q9FNN7 EnsemblPlants:AT5G08510.1 GeneID:830750
KEGG:ath:AT5G08510 GeneFarm:4218 TAIR:At5g08510 eggNOG:NOG254377
InParanoid:Q9FNN7 OMA:NLCSWNS PhylomeDB:Q9FNN7
ProtClustDB:CLSN2687299 Genevestigator:Q9FNN7 Uniprot:Q9FNN7
Length = 511
Score = 97 (39.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLES-LGVHTDEVTMVVVLAASSGPGALDFGK- 137
++ S +ISG+SQ G ++EAL+ F +E V + +T+V VL A + G L+ G+
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 138 -----------SNIFLTTAIIEMYAK 152
NI++ A IEMY+K
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSK 262
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMV 34
MI+GY + G A+E F + V T T++
Sbjct: 154 MITGYQRRGDMKAAMELFDSMPRKNV-TSWTTVI 186
>TAIR|locus:2119440 [details] [associations]
symbol:AT4G13650 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035528 EMBL:AL161537
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BX827423 IPI:IPI00545859 PIR:T05234 RefSeq:NP_193101.2
UniGene:At.50335 ProteinModelPortal:Q9SVP7 SMR:Q9SVP7 PaxDb:Q9SVP7
PRIDE:Q9SVP7 EnsemblPlants:AT4G13650.1 GeneID:826999
KEGG:ath:AT4G13650 GeneFarm:3429 TAIR:At4g13650 eggNOG:NOG244096
InParanoid:Q9SVP7 OMA:YVCNALV PhylomeDB:Q9SVP7
ProtClustDB:CLSN2680966 Genevestigator:Q9SVP7 Uniprot:Q9SVP7
Length = 1064
Score = 106 (42.4 bits), Expect = 0.00012, P = 0.00012
Identities = 41/150 (27%), Positives = 66/150 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVL-----TASSGPGAWILAKELQIE 55
++SG+ Q+G EAL F ++ G+ + T + TA+ G + A +
Sbjct: 663 LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 722
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G I A ++ VS A+I+ YS+ G +EAL+ F
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 782
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
++ V + VT+V VL+A S G +D G
Sbjct: 783 QMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Score = 86 (35.3 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 76 IRLA-RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALD 134
IR A +D VS MI+GY+Q ++AL F ++ G+ +DEV + ++A +G AL
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 135 FGK 137
G+
Sbjct: 609 EGQ 611
Score = 64 (27.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL 52
+I+G SQ G +A+E F ++ G+ D T+ ++ A S G ++L
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
>TAIR|locus:2130354 [details] [associations]
symbol:AT4G14820 "AT4G14820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 HOGENOM:HOG000237569 IPI:IPI00529570 PIR:C71411
RefSeq:NP_193218.1 UniGene:At.65379 ProteinModelPortal:O23337
SMR:O23337 EnsemblPlants:AT4G14820.1 GeneID:827139
KEGG:ath:AT4G14820 GeneFarm:3141 TAIR:At4g14820 eggNOG:NOG309125
InParanoid:O23337 OMA:VLWHSEK PhylomeDB:O23337
ProtClustDB:CLSN2685361 Genevestigator:O23337 Uniprot:O23337
Length = 722
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 45/155 (29%), Positives = 67/155 (43%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKE----LQIEX 56
MIS Y ++ EAL F ++ G+ D V+M V++A + G AK + +
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 57 XXXXXXXXXXXXR-YAHSGRIRLARD-----P----VSCKAMISGYSQAGRFNEALEPFG 106
YA G + RD P VS +MI+ S G ++AL F
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIF 141
+++ V +EVT V VL S G ++ GK IF
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK-IF 468
>TAIR|locus:2013079 [details] [associations]
symbol:AT1G19720 "AT1G19720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007797 EMBL:AC024609 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229137 EMBL:AJ006040
IPI:IPI00522498 PIR:C86330 PIR:T52647 RefSeq:NP_173402.2
UniGene:At.16215 ProteinModelPortal:Q9FXH1 SMR:Q9FXH1 PaxDb:Q9FXH1
PRIDE:Q9FXH1 EnsemblPlants:AT1G19720.1 GeneID:838561
KEGG:ath:AT1G19720 GeneFarm:3162 TAIR:At1g19720 eggNOG:NOG325213
InParanoid:Q9FXH1 OMA:TWNIMIS PhylomeDB:Q9FXH1
ProtClustDB:CLSN2680057 Genevestigator:Q9FXH1 Uniprot:Q9FXH1
Length = 894
Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
Identities = 41/159 (25%), Positives = 74/159 (46%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGP-GAWILAK----ELQIE 55
+I+GY Q G+ +EALE F K++ + VT++ +L A + GA ++ + L+
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLAR---------DPVSCKAMISGYSQAGRFNEALEPFG 106
YA SG I +R D ++ ++I GY G + AL F
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIFLTTA 145
++++ G+ + T+ ++ A G +D GK +F + A
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKK-VFYSIA 652
>TAIR|locus:2020703 [details] [associations]
symbol:AT1G03540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC002560 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:DQ446225 IPI:IPI00544838
PIR:T00904 RefSeq:NP_171853.1 UniGene:At.51470
ProteinModelPortal:Q9LR69 SMR:Q9LR69 PRIDE:Q9LR69
EnsemblPlants:AT1G03540.1 GeneID:839466 KEGG:ath:AT1G03540
GeneFarm:3641 TAIR:At1g03540 eggNOG:NOG295682 HOGENOM:HOG000241954
InParanoid:Q9LR69 OMA:LGGYCQN PhylomeDB:Q9LR69
ProtClustDB:CLSN2679681 Genevestigator:Q9LR69 Uniprot:Q9LR69
Length = 609
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 42/159 (26%), Positives = 66/159 (41%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQIEXXXXX 60
++ GY Q G +A+E F ++E D VL A +G A L KE+ +
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 61 -----XXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
Y SG I A R+ ++ AM+S +Q GR EA+ F
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIFLTTA 145
+ G+ D ++ + +L A G +D G+ N F+ A
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGR-NYFVLMA 490
>TAIR|locus:2198811 [details] [associations]
symbol:MEF3 "AT1G06140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
Gene3D:1.25.40.10 EMBL:AC024174 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 GO:GO:0080156 HOGENOM:HOG000237569
IPI:IPI00535707 PIR:G86196 RefSeq:NP_172104.1 UniGene:At.51500
ProteinModelPortal:Q9LND4 SMR:Q9LND4 PaxDb:Q9LND4 PRIDE:Q9LND4
EnsemblPlants:AT1G06140.1 GeneID:837123 KEGG:ath:AT1G06140
GeneFarm:3612 TAIR:At1g06140 eggNOG:NOG307299 InParanoid:Q9LND4
OMA:VHGYMIR PhylomeDB:Q9LND4 ProtClustDB:CLSN2682285
Genevestigator:Q9LND4 Uniprot:Q9LND4
Length = 558
Score = 102 (41.0 bits), Expect = 0.00014, P = 0.00014
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKELQ---IEXX 57
+ISG+++ R EA + F ++ + ++ T+ +L + S G+ K + I
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG 342
Query: 58 XXXXXXXXXXX--RYAHSGRIRLARD-----P----VSCKAMISGYSQAGRFNEALEPFG 106
YA G I++AR P +S +MI+ + G F EAL+ F
Sbjct: 343 IEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFH 402
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFG 136
K++S V + VT V +L+A S G + G
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVKEG 432
>TAIR|locus:2084963 [details] [associations]
symbol:AT3G04750 "AT3G04750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC011437 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00519828
RefSeq:NP_187126.1 UniGene:At.53184 ProteinModelPortal:Q9SR01
SMR:Q9SR01 PaxDb:Q9SR01 PRIDE:Q9SR01 EnsemblPlants:AT3G04750.1
GeneID:819635 KEGG:ath:AT3G04750 GeneFarm:3697 TAIR:At3g04750
eggNOG:NOG261705 InParanoid:Q9SR01 OMA:SRSIWGS PhylomeDB:Q9SR01
ProtClustDB:CLSN2684293 Genevestigator:Q9SR01 Uniprot:Q9SR01
Length = 661
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 39/152 (25%), Positives = 70/152 (46%)
Query: 1 MISGYSQAGRFNEAL-EPFGKLESLG-VHTDEVTMVVVLT--ASSGP---GAWILAKELQ 53
++ GYS+ G + E F ++ + V D VTMV +++ A++G G W+ ++
Sbjct: 337 LLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR 396
Query: 54 IEXXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEP 104
++ Y G I A +D +MI+G + G +AL+
Sbjct: 397 LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 105 FGKLESLGVHTDEVTMVVVLAASSGPGALDFG 136
FG+++ GV + VT++ VL A S G ++ G
Sbjct: 457 FGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
>TAIR|locus:2168963 [details] [associations]
symbol:AT5G47460 "AT5G47460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB025628 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00516266
RefSeq:NP_199557.1 UniGene:At.29890 UniGene:At.66689
ProteinModelPortal:Q9FGL1 SMR:Q9FGL1 PaxDb:Q9FGL1 PRIDE:Q9FGL1
EnsemblPlants:AT5G47460.1 GeneID:834796 KEGG:ath:AT5G47460
GeneFarm:4043 TAIR:At5g47460 eggNOG:NOG299819 HOGENOM:HOG000115646
InParanoid:Q9FGL1 OMA:PNSSSWN PhylomeDB:Q9FGL1
ProtClustDB:CLSN2686376 Genevestigator:Q9FGL1 Uniprot:Q9FGL1
Length = 576
Score = 86 (35.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 84 SCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK------ 137
S +++GY + + EA E F K+ S GV DE ++ +VLAA + + +G
Sbjct: 287 SWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACA 346
Query: 138 ------SNIFLTTAIIEMYAK 152
S + + +A+I+MY+K
Sbjct: 347 HKLGLDSRVVVASALIDMYSK 367
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTA 39
++SGY Q+GRF E + F +L V +E + L A
Sbjct: 127 LVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
>TAIR|locus:2007888 [details] [associations]
symbol:AT1G17630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022492 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00541865 RefSeq:NP_173207.1 UniGene:At.51653
ProteinModelPortal:Q9LNP2 SMR:Q9LNP2 PaxDb:Q9LNP2 PRIDE:Q9LNP2
EnsemblPlants:AT1G17630.1 GeneID:838340 KEGG:ath:AT1G17630
GeneFarm:3636 TAIR:At1g17630 eggNOG:NOG260559 InParanoid:Q9LNP2
OMA:REIHGHV PhylomeDB:Q9LNP2 ProtClustDB:CLSN2682102
Genevestigator:Q9LNP2 Uniprot:Q9LNP2
Length = 731
Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
Identities = 39/155 (25%), Positives = 69/155 (44%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPGAWILAKEL-----QIE 55
+I G + GR +++LE F +++ V + VT+ +L+ + A L +E+ +
Sbjct: 405 VIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTS 464
Query: 56 XXXXXXXXXXXXXRYAHSGRIRLA---------RDPVSCKAMISGYSQAGRFNEALEPFG 106
YA G + +D +S ++I GY G +AL F
Sbjct: 465 MSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFD 524
Query: 107 KLESLGVHTDEVTMVVVLAASSGPGALDFGKSNIF 141
++ S G H D + +V VL+A S G ++ G+ IF
Sbjct: 525 RMISSGFHPDGIALVAVLSACSHAGLVEKGRE-IF 558
>TAIR|locus:2032955 [details] [associations]
symbol:AT1G25360 "AT1G25360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC079374 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533539 PIR:E86383 RefSeq:NP_173907.1
UniGene:At.41352 ProteinModelPortal:Q9FRI5 SMR:Q9FRI5
EnsemblPlants:AT1G25360.1 GeneID:839121 KEGG:ath:AT1G25360
GeneFarm:3520 TAIR:At1g25360 eggNOG:NOG253193 InParanoid:Q9FRI5
OMA:EPCDYAF PhylomeDB:Q9FRI5 ProtClustDB:CLSN2682612
Genevestigator:Q9FRI5 Uniprot:Q9FRI5
Length = 790
Score = 97 (39.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 83 VSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGK 137
V+ AMISGY G + EALE ++ S G+ DE T V+ A + G L GK
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
Score = 43 (20.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVL 37
MI+G+S A+ F K++ G D T VL
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
>TAIR|locus:2089591 [details] [associations]
symbol:AT3G14730 "AT3G14730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AB023038
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00531281
RefSeq:NP_188091.1 UniGene:At.65089 ProteinModelPortal:Q9LUC2
SMR:Q9LUC2 PRIDE:Q9LUC2 EnsemblPlants:AT3G14730.1 GeneID:820701
KEGG:ath:AT3G14730 GeneFarm:3860 TAIR:At3g14730 eggNOG:NOG247744
InParanoid:Q9LUC2 OMA:REIHGYM PhylomeDB:Q9LUC2
ProtClustDB:CLSN2684945 Genevestigator:Q9LUC2 Uniprot:Q9LUC2
Length = 653
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00068
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 81 DPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS-- 138
D V A+++GYSQ RF +AL F K+ GV T+ VL+A + G +D G+S
Sbjct: 226 DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
Query: 139 ----------NIFLTTAIIEMYAK 152
+I ++ A+I+MY K
Sbjct: 286 GLAVKTGSGSDIVVSNALIDMYGK 309
Score = 77 (32.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 80 RDPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS 138
+D S MI+GY AL+ F + GV DE+T V +L A S G L+ G++
Sbjct: 431 KDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRN 489
Score = 73 (30.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSGPG 44
+++GYSQ RF +AL F K+ GV T+ VL+A + G
Sbjct: 233 LVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSG 276
>TAIR|locus:2176927 [details] [associations]
symbol:AT5G52850 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 EMBL:AB009055 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 UniGene:At.29591 UniGene:At.66774
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00540501
RefSeq:NP_200097.1 ProteinModelPortal:Q9FLX6 SMR:Q9FLX6
EnsemblPlants:AT5G52850.1 GeneID:835362 KEGG:ath:AT5G52850
GeneFarm:3328 TAIR:At5g52850 eggNOG:NOG265214 InParanoid:Q9FLX6
OMA:NEFTFVK PhylomeDB:Q9FLX6 ProtClustDB:CLSN2686138
Genevestigator:Q9FLX6 Uniprot:Q9FLX6
Length = 893
Score = 88 (36.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 81 DPVSCKAMISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLAASSGPGALDFGKS-- 138
D +S MIS A ++ EAL+ + ++ GV +E T V +L ASS G L+FGK+
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIH 247
Query: 139 ----------NIFLTTAIIEMYAK 152
N+ L T++++ Y++
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQ 271
Score = 60 (26.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 1 MISGYSQAGRFNEALEPFGKLESLGVHTDEVTMVVVLTASSG 42
MIS ++++ F AL F ++ + G H +E T V+ + +G
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 153 140 0.00091 102 3 11 22 0.44 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 80
No. of states in DFA: 535 (57 KB)
Total size of DFA: 109 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.37u 0.10s 11.47t Elapsed: 00:00:01
Total cpu time: 11.38u 0.11s 11.49t Elapsed: 00:00:01
Start: Fri May 10 18:07:17 2013 End: Fri May 10 18:07:18 2013